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Electrochemical sensors based on conducting


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Article in Electrochimica Acta · August 2006


DOI: 10.1016/j.electacta.2005.11.052

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RESEARCH
ARTICLE
Electrochimica Acta (Advanced authors version )
Reviewarticle
Cite this article as: A. Ramanavicius, A. Ramanaviciene, A.
Malinauskas, Electrochemical sensors based on conducting
polymer – polypyrrole (Review) Electrochimica Acta 2006, 51, 6025–
6037.
Journal version is available at:
http://www.sciencedirect.com/science/article/pii/S0013468606003252

Electrochemical sensors based on


conducting polymer – polypyrrole
(Review)
A. Ramanavicius1,2∗, A. Ramanaviciene1,2, A. Malinauskas3
1.Department of Analytical and Environmental Chemistry, Vilnius University, Naugarduko 24, 03225 Vilnius, Lithuania
2.Laboratory of Immunoanalysis and Nanotechnology, Institute of Immunology of Vilnius University, Mol˙et˛u pl. 29,
08409 Vilnius, Lithuaniac
3. Department of Organic Chemistry, Institute of Chemistry, Goˇstauto 9, 01108 Vilnius, Lithuania
∗ Corresponding author. Tel.: +370 5 2330987; fax: +370 5 2330987. E-mail address: arunas@imi.lt (A. Ramanavičius).

DOI:

Abstract
Conducting polymers can be exploited as an excellent tool for the preparation of nanocomposites with
nano-scaled biomolecules. Polypyrrole(Ppy) is one of the most extensively used conducting polymers
in design of bioanalytical sensors. In this review article significant attention ispaid to immobilization
of biologically active molecules within Ppy during electrochemical deposition of this polymer. Such
unique properties ofthis polymer as prevention of some undesirable electrochemical interactions and
facilitation of electron transfer from some redox enzymes are discussed. Recent advances in
application of polypyrrole in immunosensors and DNA sensors are presented. Some new
electrochemical targetDNA and target protein detection methods based on changes of semiconducting
properties of electrochemically generated Ppy doped by affinityagents are introduced. Recent progress
and problems in development of molecularly imprinted polypyrrole are considered.
© 2006 Elsevier Ltd. All rights reserved.
Keywords:Conducting polymers; Polypyrrole; Biosensor; DNA sensor; Immunosensor; Molecularly
imprinted polymers; Bioelectrochemistry; Nanotechnology;Nanobiotechnology
biomolecules,mainly proteins and single stranded DNA
1. Introduction oligomers. Some conductingpolymers doped and/or covalently
or not covalentlymodified by bionanomaterials mentioned
Nanotechnology is rapidly evolving to open new exhibit unique catalytic[1] or affinity [2] properties that can be
materialsuseful in solving challenging bioanalytical problems, easily appliedin the design of bioanalytical sensors
includingspecificity, stability and sensitivity. Here conducting (biosensors).
polymers can be exploited as an excellent tool for the Polypyrrole is one of the most extensively used conducting
preparationof nanocomposites with entrapped nano-scaled polymers in design of bioanalytical sensors [3] as well as for
6025
A. Ramanavicius, A. Ramanaviciene, A. Malinauskas, Electrochemical sensors based on conducting
polymer – polypyrrole (Review) Electrochimica Acta 2006, 51, 6025–6037.
A. Ramanavicius, A. Ramanaviciene, A. Malinauskas, Electrochemical sensors based on conducting
polymer – polypyrrole (Review) Electrochimica Acta 2006, 51, 6025–6037.

other purposes. Since 1990 up to June 2005 period solelyin the synthesis is attractive in photolithographicapplication of this
Journal ElectrochimicaActa over 300 papers appearedon polymer, since it allows alterations in synthesized Ppy
various properties and applications of polypyrrole. morphology by change of excitation light wave length [34] and
Versatilityof this polymer is determined by a number of theoretically it might be applied for the design of electronic
properties: redox activity [4], ability to form nanowires with chips. However, because of slow light induced polymerization
room temperature conductivity ranging from 10−4 to 10−2 S rate this polymerization type is still not very often applied if
cm−1 [5], ion-exchange and ion discrimination capacities [6,7], compared with chemical or electrochemical polymerization.
electrochromic effect depending onelectrochemical By using chemically induced polymerization the Ppy ismainly
polymerization conditions and charge/discharge processes [8], produced in the bulk solution and just some amount
strong absorptiveproperties towards gases [9],proteins [10], ofsynthesized polypyrrole is covering the surface of
DNA [11], catalytic activity [12,13,14], corrosion protection introducedmaterials. It means that chemically induced
properties [15], etc. Most of these properties are depending on polymerization isnot very efficient with respect to deposition of
the synthesis procedure as well as on the dopant nature Ppy over somesurfaces. Moreover, Ppy is almost insoluble in
[2].Polypyrrole might be electrochemically generated and usual solvents,except some cases where it is doped with proper
deposited on the conducting surfaces. This technique is agents increasingsolubility of this polymer [35] and it means
successfully exploited for development of various types of that deposition(e.g. by solvent evaporation) of this polymer
electrochemical sensors and biosensors. Here several major from the solutioncontaining dissolved polymer is possible at
directions are straightforward: (i) catalytic sensors based on the stage where thepolymer is still in the form of colloid
immobilized enzymes [1,16,17]; (ii) immunosensors based on particles, before its precipitation [30].However, the major
immobilized affinity exhibiting proteins [18]; (iii) DNA obstacle for use of this deposition method for designing of Ppy
sensors based on covalently immobilized and/or entrapped based sensors is a poor adherence of this deposit to the surface,
ssDNA[19,20,21]; (iv) affinity sensors based on molecularly contrary to the film obtained by electrochemical
imprinted polymers [22].Versatility of this polymer is polymerization. But all these disadvantages might be avoided if
determined by the following: its biocompatibility; capability to electrochemical polymerization is applied. It allows deposition
transduce energy arising from interaction of analyte and of Ppy over electrodes deposited in the electrochemical cell.
analyte-recognizing-site into electrical signals that are easily That is the reason why electrochemical polymerization has
monitored; capability to protect electrodes from interfering found an application as a general deposition method if thin Ppy
materials; easy ways for electrochemical deposition on the layers are requested. By using this method thickness and
surface of any type of electrodes. Nowadays this polymer morphology of deposited layer might be controlled by
becomes one of the major tools for nanobiotechnological application of well-defined potential and known current
applications [23]. passing through the electrochemical cell [36]. Electrochemical
The aim of this study is to review major advances and deposition of Ppy might be performed from various solvents
applications of this polymer in design of catalytical (e.g. acetonitrile, water, etc.). From the point of view of
biosensors,immunosensors, DNA sensors and molecularly nanostructuring of this polymer it is really very important that
imprinted polymerbased sensors. Ppy synthesis might be performed from water solution at
neutral pH, since it opens the ways for entrapment and/or
doping of polypyrrole by various biomaterials like small
2. Experimental organic molecules, proteins, DNA and even living cells.
However, if buffers with low bufferingcapacitance are used as
2.1.Electrochemical polymerization of polypyrrole versus polymerization solution, a potentialproblem is the local
chemical polymerization production of a great amount of protonsin the course of the
polymerization which may affect the properties of the
Polypyrrole was firstly synthesized in 1912 [24]. Polypyrrole biomolecules to be entrapped inside the Ppy film. In particular
synthesized by conventional chemical methods is insoluble in cases overoxidizedPpy might be synthesized and entrapped
common solvents because of strong inter-chain interactions molecules and/or dopants might be extracted from the Ppy
[25]. Two major ways are applied for polypyrrolesynthesis structure. In such cases so called molecularly imprinted
which are based on induction of polymerization by different polymers might be designed. Moreover, electrochemical
factors: (i) chemical initiation by oxidative agents [24,26]; (ii) polymerization is applied for deposition of polypyrrole layers
photo induced synthesis [27]; (iii) electrochemical activation inside geometrically complicated electrochemical cells [37]
by anodic current [28]. All polymerization initiation methods and there is almost no doubt that this polymerization method
mentioned have particular application, e.g. chemical initiation might be extremely useful for deposition of Ppy layers inside
by oxidative agents might be successfully applied if a great microfluidic devices. Furthermore, electrochemically
amount of polypyrrole is needed for application in the design synthesized Ppy has some attractive features, such as good
of chromatography columns [29] or for some other conductivity and very high adherence of these films to the
purposes.By using chemical [26] or even biochemical mostly for biosensor design used substrates leading towards
[30]methods itis easy to prepare Ppy particles of different sufficient stability of biosensors, even in a neutral pH region.
and/or controlled size ranging from several nanometers up to On the other hand, the electrochemical properties of
several micrometers and/or containing various inclusions. Ppystrongly depend on the redox state of this polymer. At
Moreover, by chemical methods it is possible to uniformly positive potentials an overoxidation of Ppy is occurring what is
perform overoxidation of this polymer, what is on special leading towards lowering of Ppy conductivity and makes easier
interest of affinity chromatography since molecularly imprinted leakage of anionic molecules if they were included into
Ppy might be produced, which might exhibit selectivity to polymeric backbone. Overoxidation of Ppy appears at lover
molecules ranging from the small organics [31,32,33] to high positive potentials in water and/or oxygen-containing
molecular weight biomolecules [22]. Photo induced Ppy environment
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A. Ramanavicius, A. Ramanaviciene, A. Malinauskas, Electrochemical sensors based on conducting
polymer – polypyrrole (Review) Electrochimica Acta 2006, 51, 6025–6037.

and in this case it is leading towards partial destruction of technique (e.g. potentiometric, amperometric and impedimetric
polymeric backbone and generation of oxygen-containing techniques are mainly applied for analytical signal registration
(carboxyl, carbonyl and hydroxyl) groups. OveroxidizedPpy in design of electrochemical sensors and biosensors); (iii)
has been used in many electroanalytical applications that utilize establishment of efficient electron transfer if amperometric
its permselectivity and is often used as discrimination detection is applied. Consequently, immobilization of
membrane which significantly increases selectivity of biologically active material is of pivotal importance in the
electrochemical biosensors [38,39]. The capability of creation of biosensors [42], since it allows application of the
electrochemical polypyrrole synthesis is significantly extended, same biologically active material for a number of analysis
since some different electrochemical techniques might be cycles. The requirements for successful biomaterial
applied for deposition of Ppy over the electrodes: constant immobilization are: (i) biological recognition properties and/or
potential electrodeposition, galvanostatic deposition, cyclic catalytic properties of biomaterial should remain after
voltammetry, and potential pulse techniques [40]. immobilization; (ii) the biomaterial should be well fixed
According to our experience based on application of on/within the substrate, otherwise the biosensor will lose its
conducting polymers in biosensor design the potential pulse activity; (iii) improve or at least minimally decrease selectivity
technique is the most suitable for nanostructuring of Ppy by of constructed biosensor or bioanalytical system; (iv) improve
entrapment of biologically active materials within backbone of electron transfer if amperometric measurements are applied as
this polymer. Potential pulse techniques enable to increase signal transduction system. To solve the majority and
concentration of entrapped biologically active material within sometimes all these tasks, conducting polymers can be
nano-thin layers of polypyrrole[40] because various potentials considered as a very effective substrate for biomaterial
might be applied in step manner. Higher potential steps are immobilization. Among other conducting polymers,
applied for initiation of Ppy polymerization and lower or polyaniline is often used as immobilizing substrate for
negative potential steps are used for attraction of higher biomolecules[39] and sometimes as efficient electrocatalysts.
amount of biomaterial, which is entrapped into polymeric However, thenecessity to detect bio-analytes at neutral pH
backbone during polymerization step that is initiated by range leads to electro-inactivity of the deposited films,
potential in the range of +0.6 to +1.2V versus Ag/AgCl. The discouraging the use of polyaniline and polythiophene as
number of potential steps, the profile of potential applied and biosensing materials. As opposed to polyaniline, polypyrrole
duration of each step might be set up individually depending on might be easily deposited from neutral pH aqueous solutions
the application of determined requirements. All factors containing pyrrole monomer. It makes this polymer very
mentioned enable to prepare large variation of nanostructured attractive and at present it is one of the most extensively
polymeric layers with different analytical characteristics even studied materials useful for immobilization of different
if the same bulk solution is used for polymerization. In general, biomolecules and even living cells. On the other hand, Ppy is
electrochemical polymerization is more versatile if compared often used in catalytic and affinity biosensors because of good
with chemical one in terms of possible variations and control of biocompatibility and the easy ways for immobilization of
polymerizationconditions. Moreover, combination of biomolecules [43]. Biomaterials might be immobilized by
electrochemical techniqueswith some chemical surface various
modification techniquesopens new opportunities for methods: (i) adsorption on electrochemically or chemically
development of new nanobiostructuralassemblies based on this formed Ppy surface [44]; (ii) entrapment during
polymer. More in detail, it wasdemonstrated that the surface of electrochemical deposition of polypyrrole[17,28,36,37,40]; (iii)
electrochemically depositedPpy after some additional self entrapped if biomaterial is able to initiate polypyrrole
electrochemical/chemical functionalizationmight be covalently synthesis [30]. Asit was mentioned in previous paragraph, by
modified by enzymes [41]. Thosestructures were applied in chemical initiationit is easy to produce large extent of
bio-catalytic biosensor design, andit was demonstrated that Ppy polypyrrole modified withbiomaterials, however, this method
layers modified by the sameenzyme exhibit significantly is not well suitable for theformation of well defined layered
different selectivity towards varioussubstrates if different Ppy structures such as usually areneeded for sensor design. On the
modification approaches areapplied. contrary, the electrochemicalPpy polymerization allows the
However, there are some particular cases where chemical formation of uniform films, thethickness and morphology of
methods have some advantages if compared to electrochemical such films might be controlled by regulation of passing current
methods. Chemical methods are still mostly used if large extent and/or potential applied. Here the application of pulsed
of Ppy or appropriate Ppy structures e.g. nanoparticles orPpy potential techniques allows preconcentration of biologically
coated nanoparticles of other materials are needed. active molecules (e.g. DNA, enzymes, etc.) by applying of
Nanocomposites of chemically synthesized polypyrrole are proper potential between the pulses initiating polymerization of
mainly applied for affinity chromatography purposes [33], but polypyrrole[45]. In majority of cases the pulse technique
electrochemical methods are mainly used for construction of allows at least to avoid a strong diminution of biologically
chemical sensors, biosensors and actuators. So, in general, both active compound concentration near the electrode surface
Ppy synthesis methods are finding particular application areas which takes place at the steady-state diffusion regime and it
for various technological purposes. strongly enhances amount of inside the film incorporated
biologically active compound if compared to the steady-state
polymerization. Moreover, it was shown that Ppy is able very
2.2. Polypyrrole as versatile immobilization matrix in effectively discriminate cations and anions, since permeability
design of biosensors and permselectivity of Ppy depends on the counter ion
incorporated during polymerization as well as on the ions
Most important considerations during the creation of any type present in the sample [7]. In particular cases anions (e.g.
of electrochemical biosensors are: (i) the immobilization of the phosphate) doped electrochemically deposited Ppy if properly
bio-catalyst; (ii) application of appropriate electrochemical doped by some anions might be not permeable for anions what
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A. Ramanavicius, A. Ramanaviciene, A. Malinauskas, Electrochemical sensors based on conducting
polymer – polypyrrole (Review) Electrochimica Acta 2006, 51, 6025–6037.

is very useful for electrochemical biosensors since the majority ofenzymes can be divided into several major subtypes that
of electrochemically interfering materials present in biological differwith respect to cofactors involved into catalytic reaction.
samples are anions [38,39]. It was also demonstrated that Ppy Cofactorsmainly effect the signal transduction process and
protects electrodes from fouling by proteins and another should betaken into account during catalytic biosensor
biological substances present in the real samples as blood construction and allthese biosensors have some specific
serum and urine [46]. It was shown that various properties mainly related tothe used enzymes. If enzymes are
nanocomposites that might be designed using combinatorial applied in the design of amperometric biosensors efficient
methods by polymerization of a number of electrochemically electron transfer route is crucial for registration of analytical
polymerizable compounds are useful signal and the most successful sensorsare so called “reagent
for biosensor design [47]. less” biosensors that are operating withoutaddition of any other
The stability of Ppy based biosensors is sufficient and mainly soluble materials essential for analyticalsignal registration.
determined by degradation of Ppy in the water surrounding if Successful application of polypyrrole modified by enzymesin
biosensor is applied for continuous measurements. In the design of catalytic biosensors started by entrapmentof
conclusion, from the point of view of electrochemical glucose oxidase from Aspergilusnigerwithin
biosensingPpy has a number of very attractive characteristics: polypyrrole[49,50], later polyaniline was also successfully
(i) it might be synthesized electrochemically and modified by modified withthis enzyme [51,52] and employed for glucose
enzymes in several different ways that gives different sensing. Now,FAD-dependent oxidases [53,54,55,56,57],
analytical characteristics for constructed biosensors; (ii) it NAD+-dependent dehydrogenases [58,59,60,61,62], PQQ-
protects electrodes from fouling and interfering materials such dependent dehydrogenases [16,63,64,65,66,67], peroxidases
as electroactive anions; (iii) it is biocompatible and, hence, [68,69,70,71] and some multicofactor enzymes [72,73,74]are
causes minimal and reversible disturbance to the working mostly used in the design of catalytic biosensors. The
environment; (iv) in some particular cases it might be exploited embedment of enzymes within a conducting polymer film
as redox mediator able to transfer electrons from the redox prevent the enzyme from being leached out, while at the same
enzymes towards electrodes. time maintaining accessibility of the catalytic sites due to the
permeability of the film to analytes[75]. Pulse technique for the
electrochemical deposition of polymer films on electrode
surfaces enabled the increase in the concentration of entrapped
2.3. Catalytic biosensors based on polypyrrole enzyme within thin layers of Ppy[40]. Further, the enzyme
activity is usually detected by characterization of final reaction
Catalytic biosensors are described as compact products or redox mediators using amperometric or
analyticaldevices, incorporating a bio-catalytic element or potentiometric methods.
integratedwithin a transducer system [48]. The detection of In the case of application of FAD-dependent oxidases
analyte inthis kind of biosensors is based on specific catalytic oxidation of enzymatically produced H2O2 is only possible at
conversionof the analyte of interest by a bio-catalyst high electrode potentials (Fig. 1). Some suitable redox
immobilized onthe suitable signal transducer. The specific mediatorsable to facilitate the electron transfer between the
interaction of analytewith bio-recognition element results in a active site of the enzyme and electrode can be applied in the
change of one ormore physicochemical properties (e.g. electron design of electrochemical catalytic biosensors. So-far described
transfer, capacity,optical properties) which can be detected and oxidasesentrapped within conducting polymer-based
measured viasignal transduction and registered by registration biosensors are requiring soluble redox mediators or conducting
devices.Electrochemicalcatalytic biosensors are on special polymer backbone should be enhanced by redox species [76].
interest since theycan be applied for detection of analytes in The most successful biosensors based on oxidases
non-transparent samplesand the majority of electrochemical entrapped within polypyrrole were reported when redox
catalytic sensors arerelatively cheap and easy in application. polymers were constructed on the basis of pyrrole which was
copolymerized with pyrrole substituted by redox mediators.
Thus, for fixing of redox mediators several main strategies
might be applied, e.g.: (i) osmium bipyridine complex based
redox species were attached to pyrrole and after
copolymerization of this compound with pyrrole several
different redox polymers able to transfer electrons from redox
center of glucose oxidase were designed [64,77]; (ii) PQQ-
dependent glucosedehydrogenase was wired by ferrocene
derivatives [78]; (iii) modification of polymeric layers with
some soluble mediators that are almost freely diffusing within
the film [67,63,65,74].

Fig. 1. Generalized scheme of electrochemical biosensors


based on glucoseoxidase. Mox, oxidized form of redox
mediator; Mred, reduced form of redoxmediator.

Thus, as it was mentioned previously, the redox enzymes


aremainly used in the design of catalytic biosensors. This class

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A. Ramanavicius, A. Ramanaviciene, A. Malinauskas, Electrochemical sensors based on conducting
polymer – polypyrrole (Review) Electrochimica Acta 2006, 51, 6025–6037.

complexmodified redox polymer with entrapped PQQ-


dependent glucosedehydrogenase was applied for glucose
sensing independenton oxygen concentration fluctuations [64].
Some multicofactor enzymes, like PQQ and heme-c
based alcohol dehydrogenase were found to be able to transfer
electrons directly to some conducting surfaces including
polypyrrole (Fig. 4). Such enzymes might be easily applied in
the design of amperometric biosensors based on polypyrrole
because application of any redox mediators is not essential in
this case. It was shown that PQQ-dependent alcohol
dehydrogenase (QH-ADH) covalently attached to the backbone
of polypyrrole retains its catalytic activity [41]. Moreover, it
was demonstrated that QHADH entrapped within polypyrrole
exhibit direct electron transfer to this polymer [72]. It might be
predicted that Ppy and hemec- containing dehydrogenases
based polymeric configurations might be promising in the
design of biofuel cells [85] and other bioelectronic devices
Fig. 2. Generalized scheme of electrochemical biosensors [86]. However, there is just a very limited number of such
based on NAD+- dependent glucose dehydrogenase.Mox, enzymes able to directly transfer electrons toward backbone of
oxidized form of redox mediator;Mred,reduced form of redox conducting polymers. On the other hand, the highest currency
mediator densities in biosensors based on PQQ and
heme-c based alcohol dehyrogenase were achieved when they
In the case of application of oxidases the sensor response was were deposited over electropolymerized 4-ferrocenylphenol, N-
dependent on the availability of molecular oxygen; it is a (4-hydroxybenzylidene)-4-ferrocenylaniline, and 2-ferrocenyl-
significant drawback because this concentration is not constant 4-nitrophenol [78].
and might significantly differ from sample to sample. This Biosensors with different selectivity and activity
drawback might be avoided by application of dehydrogenases characteristicsmight be designed, since several different
since these enzymes do not require any oxygen as electron conceptions might be used for immobilization of the same
acceptor. Dehydrogenases that are suitable for application in enzymes: (i) adsorption of enzymes over electrochemically
amperometric biosensors might be divided into two major deposited Ppylayer [44,87,88]; (ii) covalent attachment of
subclasses: NAD+-dependent dehydrogenases, and PQQ- enzymes after introduction of amino groups into Ppy backbone
dependent dehydrogenases. In the case of theNAD+-dependent andformation of amide bounding due to interaction
dehydrogenases (Fig. 2) one may successfully circumvent the
problems imposed by molecular oxygen [79].

Fig. 3. Generalized scheme of electrochemical biosensors


based on PQQdependent glucose dehydrogenase.Mox,
oxidized form of redox mediator;Mred, reduced form of redox
mediator. Fig. 4. Generalized scheme of electrochemical biosensors
based on direct electron transfer able PQQ-dependent alcohol
However, in the case of NAD+-dependent dehydrogenase. H, heme-c moiety.
dehydrogenaseapplication the coenzyme should be added to the
analyte solutionwhich is only possible in specifically designed with carbodiimide activated carboxylic groups of enzyme
flow-injectionsystems [80], or should be entrapped within [46,41,89]; here two major different Ppy functionalization
conducting polymerbackbone [81] or graphite paste electrode ways might be applied one based on application of amino
matrix [82]. Therefore,intensive attention was focused on group modified pyrrole monomers forcopolymerization with
finding new enzymes withimproved characteristics, such as unmodified pyrrole monomers, next onintroduction of
exhibit the PQQ-dependentdehydrogenases (Fig. 3) [83]. The functional groups following after preparationof Ppy film; (iii)
use of PQQ-dependentenzymes is more promising, since these entrapment within backbone of polypyrrole[17,40,59,64,89].
enzymes are oxygen Entrapment of enzymes within polypyrroleseems the most
independent, and their PQQ-cofactor in some cases is tightly promising for construction of catalytic biosensors,since this
bound within the enzyme’s active site [84]. Significant method allows to entrap significant amount ofredox enzymes
advantagewas achieved when polypyrrole based on osmium- that are able to convert high amount of analyteinto the products

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A. Ramanavicius, A. Ramanaviciene, A. Malinauskas, Electrochemical sensors based on conducting
polymer – polypyrrole (Review) Electrochimica Acta 2006, 51, 6025–6037.

and this process causes high changes ofelectrochemical signals. polymerin affinity sensors because of the best biocompatibility,
In some cases after enzyme entrapmentduring electrochemical due to
deposition of Ppy over electrodes it wasdetected that enzyme efficient polymerization at neutral pH and very easy ways for
reactivation phase is very actual before sensormight be applied immobilization of various biologically active compounds. On
for exact analyte determination. In severalcases this phase was the other hand, it seems that this polymer is capable to transfer
15–30 h long depending on the thickness ofPpy layer formed energy as electrochemical transducer [20]. Affinity sensors
[17,74]. The existence of this effect is determinedby swelling mainly rely on immobilized biomolecules or artificially
of Ppy because there are some evidencesthat immediately after formedstructures able to interact non-covalently with analyte as
the electrochemical deposition enzyme istrapped within very interactionpartner and to form multimolecular complexes.
dense polymeric structure which increasessteric hindrances for Amongsuch non-covalently interacting materials are DNA,
the substrate and deforms native structureof the enzyme. After antibodies,various proteins and molecularly imprinted
some swelling period water permeablecavities become larger polymers. Thedevelopment of immunosensors would lead to
and substrate has more possibilities fordiffusion, as well as alternatives orat least improvement in the existing
enzyme has more space to become nativeconformation which immunoassay techniques.Most related methods to
possesses highest activity if compared withother—not natural immunoassay are immunosensors; theyare mainly applied in
conformations. It was also demonstrated thateven after areas where both high selectivity andhigh sensitivity are
swelling period Ppy is able to accept electrons fromredox required [91]. Immunosensor is a devicethat is able to detect
centers of some redox enzymes and transfer those electrons to the interaction between an antibody (Ab)and an antigen (Ag)
the metal electrodes [17]. It seems that polypyrrole is an [92]. One of the binding able materials inimmunosensors is
inherently biocompatible material. The sufficient water content usually immobilized and at least one must befound in sample
ensures that the surface energy of this material is such that it as analyte. The conversion of the binding eventinto a
causes minimum disturbance to the biologically active measurable signal, the regenerability and the reusabilityare
compound. In recent years, many catalytic biosensor among major topics and challenges in
configurations and transducers have been designed allowing us immunosensordevelopment research. The conducting polymers
to detect the analyte in very lowconcentrations and with high and especiallypolypyrrole can be considered as effective
precision.However, for practical applications, a few main material for immobilization of biomaterials and for
problems remain to be solved: (i) for one-way biosensors the transducing/amplification ofanalytical signal in design of
production must be so reproducible that calibration-free immunosensing devices [72,93].Electrochemical modification
measurements can be performed; (ii) long-term stability in of electrodes by conducting polymersdoped with biologically
water containing environment should be increased. active compound included withinpolymeric backbone is a
simple step that is often used for creationof different
2.4. Immunosensors based on polypyrrole immunosensors.
In the design of immunosensors antibodies [94,95],
Immunosensors are the subject of increasing interestmainly ligands/receptors [96] and antigens [130] are applied as
because of their potential application as an biologicalmaterials able non-covalently to bind analyte.
alternativeimmunoassay technique in areas such as clinical Antibodies areconsidered to be well-suited and mostly used
diagnosticsand environmental control. Enzyme-linked recognition elementsfor construction of immunosensors. The
immunosorbentassay (ELISA) is one of the most frequently high specificityand affinity of an antibody for corresponding
used methodsfor immunoassay, because of its good sensitivity, antigen allowsa selective binding of the analyte which is
selectivity,and ease in use. Although spectrometric methods are present in nanotopico-molar range in the presence of hundreds
widelyused for the detection of enzymatic products resulting of other substances,even if they exceed the analyte
fromthe Ag–Ab reactions in ELISA, the electrochemical concentration by 2–3 orders of magnitude [97]. At the time,
methodscan provide capabilities of monitoring, free from color antibodies can be generatedagainst almost all analytes, even if
and turbid interferences and which are relatively inexpensive, the analyte is nonimmunogenic.Moreover, recombinant
that the spectrophotometric methods cannot compete with them antibody technology has now been developed to the level that
[90].Electrochemical affinity sensors acting on the principles allows the expression of single chain fragments in E. coli in
similarto ELISA usually are cheaper and faster in use if large quantities [98].In many designs of electrochemical
compared totraditional ELISA. Moreover by immunosensors immunosensors secondaryantibodies able to recognize analyte
samples without any analyte enrichment can be analyzed. In complex with immobilizedreceptor were applied. Since
many cases the purification and/or sample pretreatment step is antibodies are usuallynot electrochemically active within the
not needed, which is normally essential for standard analytical desired potential rangeredox-active compounds and/or
methods such as mass spectrometry, gas chromatography and enzymes (mainly horseradishperoxidase) [99,100,101,102] that
high performance liquid chromatography. This factor is are able to generate electrochemicalsignal can be applied as
important formany applications, especially in clinical labels for indication. Labeledimmunosensor format belongs to
diagnostics, where differentanalytes in whole blood, serum or indirect analytical signal detectionmethods. In indirect
urine containing a lotof different substances, such as proteins, electrochemical immunoassays thebinding reaction is
amino acids, sugars,hormones, etc., are analyzed. Also visualized indirectly via an auxiliary reactionby a labeling
immunosensors have considerable advantages over standard compound. Amperometric transducers in
methods with respect to timeand sensitivity [33]. indirectelectrochemical immunoassay are used much more
Major indispensable condition during the development frequentlythan others. For amperometric immunoassay the
ofaffinity sensors is immobilization of analyte binding labeling redoxcompound should have the following properties:
reagent.This task is often solved by application of conducting it should bereversibly electroactive; it should not cause
polymer,polypyrrole, since Ppy is the mostly used conducting electrode fouling;chemical groups for coupling should be
available [103].Species such as nitrophenol, H2O2, and NH3
6030
A. Ramanavicius, A. Ramanaviciene, A. Malinauskas, Electrochemical sensors based on conducting
polymer – polypyrrole (Review) Electrochimica Acta 2006, 51, 6025–6037.

that can be determinedelectrochemically are the substrates or considered to be the rate-determining step. Thisstep can be
enzymatic reactionproducts of alkaline phosphatase, controlled through the appropriate choice of electricalpotential
horseradish peroxidase, andurease, generally labeled on [108]. Pulsed amperometric detection (PAD)immunoassay
immunoreagents. Among these,because amonia is techniques are such techniques where sensor canbe used for
electrochemically inactive at low potentialsand can only be analyte detection in static or flow injection mode byapplying
detected by an ammonia gas-sensing electrode,potentiometry is pulsed potentials between the sensor surface (or
the only choice for the urease-labeledimmunoassay [104]. workingelectrode) and the reference electrode. The current
Indirect electrochemical immunoassay canbe divided into two obtainedcan be directly related to the concentration of the
major types: non-amplified and amplified.In non-amplified analyte insolution [109].
redox-labeled electrochemical immunoassaysthe indication of Besides amperometric transducers, capacitive transducers
one antigen or antibody molecule will generateone signal have been used for the real-time and label-free measurement
equivalent. Since the sensitivity of an amperometricsensor for ofthe Ag–Ab reaction. They are based on the principle that for
the redox compound is in the lower micromolar range,this kind electrolytic capacitors the capacitance depends on the thickness
of assay makes sense only if the concentration of theanalyte to anddielectric behavior of a polymeric layer before and after
be determined is also in that range [105]. For more interactionwith analyte[110]. In some particular cases
sensitiveimmunoassays amplification principles are necessary. conductivity measurements as one of transduction principle
Oneway to amplify the amperometrical signal is might be appliedin the design of electrochemical
preconcentrationstep. During this step concentration of redox- immunosensors. Conductivitymeasurements have been adapted
active compoundis increasing many times and only after some for immunoassay based onion concentration increased by the
time (1–5 min) themeasurement starts. However, there are action of enzymatic label.An enzyme immunoassay based on
often some difficultiesto regenerate the sensor before each conductivity measurementshas been reported, in which urease
measurement. was used as the secondaryantibody label. The enzyme retains
The major disadvantage of indirect immunosensors is the the activity under conditionsof lowionic strength, so a
necessity to apply additional immunochemicals labeled by lowbackground conductance could be
electrochemical labels; it makes this method more expensive, employed[111]. However, conductivity measurements are
time consuming since additional procedures mainly based on difficultdue to the variable ionic background of clinical
incubation with labeled antibodies are essential for indirect samplesand the relatively small conductivity changes that are
detection of analyte of interest. On the one hand, such observedin such high ionic strength solutions. The second
procedures increase sensitivity, but on the other hand they comparative‘blank’ electrode must be used, but variable drift at
often decrease selectivity since usually broad-range-selectivity two separateelectrodes poses a universal drawback [112].
exhibiting secondary antibodies are applied. In this respect so The inherent speed, accuracy and precision of
called ‘label-free’ immunosensors are more attractive, since electrochemicalmeasurements have stimulated efforts towards
such sensors allow measurement without any additional the developmentof both competitive and non-competitive
hazardous reagents evenin real-time [48]. Label-free electrochemicalimmunoassay formats [113]. Sensors
conversion of the binding event into a measurable signal in employing enzyme labelswith amperometric detection have
particular at a low concentration of the analyte, is one of the been frequently reported withdrugs[114], hormones
major challenges in biosensorics[48]. This topic is quite well [115,116,117,118] and proteins [119] as targetanalytes, and the
solved in surface plasmon resonance sensors what was detection of trace amounts in the sub-attomole(<10–18 mol/l)
reviewed previously [18]. Electrochemical label-free analyte range has been achieved [120]. In such detectionscheme, the
detection methods are developing not so fast but they are very enzyme label is registered via formed/degraded
useful if colored and/or not transparent samples are under electrochemically active product [121], and the function
investigation or detection of analyte should be performed in the ofenzyme-labeled immunosensors is similar to that of catalytic
body of patient. The majority of label-free electrochemical biosensors based on enzymes covalently attached to the
immunoassays are based on changes in charge densities or surfaceof polypyrrole. Glucose oxidase, horseradish
conductivities for transduction and do not need any auxiliary peroxidase,microperoxidase, _-galactosidase, alkaline
electrochemical reaction. If conducting polymers are applied phosphatase andglucose-6-phosphatase dehydrogenase, all
for immobilization of affinity towards analyte exhibiting have been employedin this mode with separation of free from
reagents after formation of immobilized receptor and analyte bound label [122,123,124].The NADH generated by glucose-6-
complex changes in capacitance/resistance are registered [106]. phophatase dehydrogenasereaction can be readily oxidized by
Here potentiometric [107], capacitive [102] and mediators such as 2,6-dichlorphenolindophenol[125] and 1,4-
amperometric[99,100,101] transducers have been used for benziquinone [126], theoxidation of those is followed
electrochemical amperometrically
immunoassays that indicate the binding of analyte directly. Several immunosensors were applied for continuous
Amperometric techniques have been used to monitor bindingof measurements [106,110,127]. The major problem to use the
analyte in real-time without using a labeled compound. immunosensor for continuous measurements is stability of
Apolymer-modified antibody electrode has been used in Ag–Ab complexes. To overcome this problem for dissociation
combinationwith pulsed amperometric detection. The current of Ag–Ab complex buffers with extreme pH values, glycine
obtainedat the immunochemical/polypyrrole based electrodes buffers or extreme salt concentrations are usually used. Flow
occurs viathe following steps: diffusion of ions to the injection mode applied together with pulsed-amerometric
electrode; chargetransfer at the porous polypyrrole membrane detection immunoassay techniques is among such techniques
interface; migrationthrough the polymer membrane; which can be successfully applied for continuous
adsorption–desorption ofthe analyte at the measurements in flow throw electrochemical cell
immunochemical/polypyrrole interface withsolution. The slow [106,110,127]. Electrochemical label free immunosensors
rate of adsorption–desorption process in thelast step is based on polypyrrole were developed [106,128]. In a novel
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A. Ramanavicius, A. Ramanaviciene, A. Malinauskas, Electrochemical sensors based on conducting
polymer – polypyrrole (Review) Electrochimica Acta 2006, 51, 6025–6037.

sampling strategy, antibody-based electrodes were used for the thenucleic acid system and the electronic transducer.
repeat, intermittent on-line monitoring of tissue corticosteroids Conductingpolymer molecular interfaces are particularly
in experimental animals. Here, in a competitive assay, sample suitable formodulating DNA interactions, for inducing
steroid competed with enzyme-labeled corticosteroid for the electrical signalsaccrued from such interactions, and for
antibody immobilized on a platinum electrode surface. localizing DNA probesonto extremely small surfaces [19].
Amperometric detection of the enzyme product was used to Among other conductingpolymers polypyrrole is most
follow the reaction, and to measure enzyme activity related to frequently used in the design ofelectrochemical DNA sensors
the analyte concentration in the sample [129]. However, for mainly for immobilization ofssDNA[144]. As it was
continuous or quasi-continuous measurements of an analyte the demonstrated in several studies, dopingof Ppy by ssDNA is a
problem of regeneration should be solved, because extreme pH very simple procedure if electrochemicaldeposition of this
values, extreme salt concentrations or other factors which are polymer in the presence of short ssDNAoligonucleotides is
usually used for dissociation of Ag–Ab complexes lead to applied [145]. In this way the formedpolymeric layer exhibits
destruction of polymeric immobilization matrix or distortion of high affinity to complementary ssDNAstrands. Ppy/DNA
sequence analytical signals. The most immediate potential sensors are based on various ssDNA immobilization strategies
applications of immunosensors are medical diagnostics such as adsorption [11], direct covalentbinding [146],
including the determination of infections [130,131], entrapment in a polymer matrix [20,21,137,147]or indirect
environmental analysis, food and beverages control. binding by the use of intermediate systems likebiotine-avidine
clips [148]. The most distinct electrochemicalsignals are
2.4. Polypyrrole in the design of DNA sensors generated after DNA hybridization. Two differentways of
ssDNA entrapment might be distinguished: (i) entrapment
DNA is a unique biomolecule, which is served in known in the presence of other counter ions [21,144,147,149];(ii)
living species as genetic information storage. Number of doping of Ppy film by ssDNA if ssDNA is present assingle ion
genome projects is providing massive amounts of genetic in electrochemical-polymerization solution and isserved as
information that should revolutionize the understanding of counter ion [20,153]. In this way polypyrrole bearing
living nature. Because genome variations between species and [21,144,147] and doped [20,153] with single-stranded DNA
some groups of individuals are straightforward and might be was applied for the development of DNA sensors. On the
clearly distinguished it makes specific DNA sequences very otherhand, polypyrrole is capable to transfer energy as an
attractive as universal analyte. Nowadays the detection of electrochemicaltransducer and direct label-free, electrical
appropriated DNA sequences is important for diagnosis of detection ofDNA hybridization has also been accomplished by
genetic or infectious diseases, environmental testing for monitoringchanges in the impedance and capacity/resistance of
bacterial contamination, rapid detection of biological warfare conductingpolymer molecular interfaces [21]. Electrochemical
agents, forensic investigations and scientific explorations in impedance technique seems most informative in label-free
genomics and proteomics. DNA detectionsince this method brings the highest number of
Moreover, DNA might be determined as important information ontarget DNA interaction with immobilized
nanomaterial, which is involved in a number of ssDNA[150,151].Significant differences in impedance between
nanotechnological and/or bioelectronic applications [132]. electrochemical
There were several demonstrations that DNA in combination systems containing single-stranded DNA immobilizedwithin
with conducting polymers might be applied for the formation polypyrrole and double-stranded DNA (dsDNA) canbe
of unique nanostructures like polypyrrole nanotubes [133] and converted into electrical signals that are easily monitored[152].
polyanilinenanovires[134]. On the other hand, DNA in However, this method can be successfully replaced byother
combination with polypyrrole was described in a number of less sophisticated electrochemical techniques like
DNA sensors, like in the case of immunosensors, cyclicvotammetry[144], pulsed amperometric detection [21] or
electrochemically labeled and label-free DNA sensors are basicamperometry[153]. Garnier et al. have reported a study in
designed. Early works on electrochemical DNA sensors were whichnucleic acid probes were linked to the polypyrrole
mainly based on the application of electrochemical labels for surface andcyclic voltammetry investigations were performed.
indication of immobilized single-stranded DNA (ssDNA) This studydemonstrated a potential shift and wave broadening
interaction with target DNA present in the sample [135,136]. in the cyclicvoltammograms registered after interaction with
Such approaches were mainly based on measuring changes in target DNA[144]. Cyclic voltammetry was applied for
the peak currents of redox labels, if the DNA duplex formed biosensing of DNAhybridization by polypyrrole functionalized
during hybridization is exposed to the solution of the indicator with ferrocenylgroups [154]. Our group has showed that pulsed
[137]. For this purpose cationic methal complexes such as amperometricdetection might be applied for detection of target
tris(2,2_-bipyridine)ruthenium (III) ([Ru(bpy)3]3+) [138] or DNA if ssDNAentrapped within Ppy is deposited over working
tris(1,10-phenanthroline)cobalt(III) ([Co(phen)3]3+) [139], electrode [21].Investigations of Wang’s group illustrated that
aromatic compounds such as dye Hoechst 33258 [140], short termcurrent peaks provoked by the hybridization event at
daunomycin[141] and naphthalene diimine with constantpotential might be registered if short complementary
covalentlyattached two fereocene moieties [142] or enzymatic poly-A,poly-G, poly-T and poly-C oligonucleotides are
labels (e.g.horseradish peroxidase) based redox indicators interacting with
[143]might be applied. complementary ones. However, if not-complementary DNA
However, the most advantageous are label-free ispresent in the sample the distinctly opposite current peaks
DNAsensors. Such systems are mainly based on monitoring wereobserved [153]. High stability of Ppy/DNA films allows
changesin electronic or interfacial properties accompanying detectionof target DNA in flow-trough systems what is a
DNAhybridization [19]. It means that the key factor significantadvantage for continuous routine measurements
concerningthe development of such electrochemical label-free [155]. On theother hand, itwas demonstrated that pyrrole–
DNAsensors is the achievement of efficient interface between DNAmight be easilyaddressed towards appropriated electrode
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A. Ramanavicius, A. Ramanaviciene, A. Malinauskas, Electrochemical sensors based on conducting
polymer – polypyrrole (Review) Electrochimica Acta 2006, 51, 6025–6037.

what is extremelyuseful for designing electrochemical-DNA Furthermore, chemical functionalities of the monomer residues
arrays [156]. become spatially positioned around the cavity in a pattern
In some polypyrrole based DNA sensors, quartz crystal which is complementary to the chemical structure of the print
microbalances or fluorescence methods were successfully molecule [172]. These imprints constitute a permanent memory
applied and such sensors were used for multiple determination for the print species and enable theimprinted polymer to rebind
of targetDNA[148]. It might be predicted that newDNAsensors the print molecule from a mixtureof closely related compounds
will be developed where intrinsic electron transfer properties of selectively [173]. Finally, the printmolecules are removed by
DNA[157] and conducting polymers will be combined solvent extraction and the molecularlyimprinted polymer is
together. Next promising direction which is offered by ready for use. Some of these polymers havebeen shown to be
nanotechnology is application of DNA in combination with useful in sensor applications, exhibiting tolerancetowards acid,
nanoparticles [158]. Here polypyrrole based nanoparticles [30] base, high temperature and organic phases[174]. It was found
might be applied, since previously described DNA sorption on that the manufacture of composites consistingof molecularly
polypyrrole-silica nanocomposites was very efficient [159]. imprinted conducting polymers resultsin obtaining materials
Carbon nanotubes modified with Ppy/ssDNA seem very that exhibit both predetermined selectivemolecular recognition
promising for electrochemical DNA sensor design and electrical conductivity [175]. Thistype of materials is of
[150,151,160]. special interest for use in the field ofsensor technology [176].
Here overoxidizedpolypyrrole is most frequently applied.
2.6. Application of polypyrrole in molecular imprinting Overoxidizedpolypyrrole exhibits an improved
technology selectivity,which is attributed to the removal of positive
charges from Ppy films due to introduction of oxygen
Indispensable condition during the development of reviously functionality, such as carbonyl groups. The preparation of
described affinity sensors is that the bind-able reagents should molecularly imprinted polypyrrole requires polymerization
be immobilized. However, given to poor chemical and physical around printed species. Then within Ppy entrapped molecules
stability of biomolecules even if they are well immobilized, are removed by solvent and the molecularly imprinted polymer
molecularly imprinted polymers and artificial receptor based is ready for use [29]. Such polymer possesses nano-pores and
sensors have been gaining importance as a possible alternative nano-cavities that are complementary to removed dopant.
to other affinity sensors (e.g. immunosensors, DNA sensors, Furthermore, chemical functionalities of the monomer residues
etc.) which are based on immobilized biomolecules [161]. The become spatially positioned around the cavity in a pattern that
preparation of molecularly imprinted polymers requires is complementary to the chemical structure of the print
polymerization around a print species using monomers that are molecule. Theseimprints constitute a permanent memory for
selected for their capacity to form specific and definable the print species and enable the imprinted polymer to
interactions with the print species. Within polymer entrapped selectively rebind the print molecule from a mixture of closely
molecules can be removed by solvent extraction and the related compounds. Sensors based on molecularly imprinted
molecularly imprinted polymer is ready for use. Cavities are Ppy for serotonin and1-naphthalensulfonate [177], amino acids
formed in the polymer matrix with ‘images’ of the size and [31,175], caffeine [32,163], atropine [178], sacharide[179],
shape of the imprinted molecules. Furthermore, chemical glycoproteins [22] were reported. Both chemically and
functionalities of the monomer residues become spatially electrochemically synthesized Ppy can be applied in the
positioned around the cavity in accord with complementarity to development of molecularly imprinted polymers. The
the chemical structure of the imprint molecule. Molecularly electrochemical properties of Ppy strongly depend on their
imprinted polymers are very promising during the development redox state. At positive potentials overoxidation of polypyrrole
of synthetic recognition systems and are of great interest to occurs. It leads to the partial degradation of polypyrrole
workers in the field of sensor technology. Molecular imprinting polymeric backbone and introduction of carboxylic, carbonilic
is increasingly becoming recognized as a versatile technique and hydroxilic groups into polymeric backbone that determines
for the preparation of artificial receptors based on molecularly semi-permeability as well as ability to recognize imprinted
imprinted conducting polymers (MIPs) containing tailor-made molecules [38]. The best results are achieved if during
recognition sites. MIP is anotherclass of substances of great electrochemical deposition overoxidizedPpy is imprinted by
interest in the field of chemical sensortechnology[162]. small molecular weight molecules [31,32,33,176]. Moreover,
Moreover, these sensors are able to detect lowmolecular mass attempts to imprint Ppy by large molecular weight rigid
organic molecules [31,32,33,163,164]. It is the reason why the structure possessing proteins were reported as well as, in this
development of synthetic recognition systems is of great case viral envelope proteins possessing rigid structure were
interest to workers in the field of sensor technology [165]. imprinted within overoxidizedpolypyrrole[22].
These highly stable synthetic polymers possess molecular The conversion of the binding event into a measurable
recognition properties due to cavities formed in the polymer signal in particular at a low concentration of the analyte, the
matrix that are complementary to the analyte (ligand) both prevention or elimination of non-specific interactions, the
inshape and in positioning of functional groups [166]. Some of regenerability, and reusability among other topics are the major
these polymers have shown very high selectivity and affinity challenges in molecularly imprinted polymer based biosensors.
constants fully comparable to natural recognition systems In such sensors differences in capacitance and/or resistance
suchas antibodies [167,168,169]. In general, molecular arising in electrochemical system during interaction of affinity
imprinting is atechnology for the manufacture of synthetic agents can be converted into signals that are easily monitored
polymers with predetermined molecular recognition properties [180]. Here pulsedamperometric detection can be applied as
[170]. The preparation of molecularly imprinted polymers basic electrochemical detection method [21,22].
requires polymerization around the print species using
monomers that are selected for their capacity to form specific
and definable interactions with the imprinted species [171].
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A. Ramanavicius, A. Ramanaviciene, A. Malinauskas, Electrochemical sensors based on conducting
polymer – polypyrrole (Review) Electrochimica Acta 2006, 51, 6025–6037.

3. Conclusions and future trends


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