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Haemophilus
influenzaeLast updated: September 5, 2018
Vaccine-Preventable Diseases 1
WHO Vaccine-Preventable Diseases Surveillance Standards
Surveillance Standards
Haemophilus influenzae
The bacteria Haemophilus influenzae type b (Hib) was Current Hib vaccines conjugate the Hib polysaccharide
the leading cause of non-epidemic bacterial meningitis capsule to one of several carrier proteins that can
worldwide in children prior to the introduction of be used effectively (2). Hib vaccines are available in
Hib vaccine. H. influenzae can be unencapsulated or monovalent formulations or combined with other
capsulated (six capsular types or serotypes), although antigens: diphtheria-tetanus-pertussis (DTP) vaccine,
95% of severe disease is caused by capsular type b hepatitis B vaccine and inactivated polio vaccine (IPV).
(Hib). H. influenzae can asymptomatically colonize Hib vaccines are given as a three- or four-dose schedule
the human nasopharynx, particularly in children. in the primary series starting as early as six weeks
The bacteria can spread contiguously to cause otitis of age; some countries give a booster dose at 12–18
media and sinusitis or be aspirated to cause pneumonia. months of age. Recommended schedules include three
More rarely, it can cause invasive disease, predominantly primary doses without a booster (3p+0), two primary
meningitis and pneumonia but also epiglottitis, septic doses plus a booster (2p+1) or three primary doses with
arthritis and others. Over 90% of invasive H. influenzae a booster (3p+1). Countries that have high coverage of
disease occurs in children < 5 years of age, the majority Hib vaccine with any of these schedules have observed
in infants; children in less developed settings tend to a > 90% decline in invasive Hib disease. Some countries
be infected earlier in infancy. Case fatality rates can be have identified an increase in Hib disease in countries
high for H. influenzae meningitis, ranging from 5% without a booster dose, but this has been small and not
with proper treatment to as high as 60% without. sustained (3).
Among survivors, 20-40% suffer sequelae such as
deafness and blindness. It is estimated that in 2008,
199 000 HIV-negative children < 5 years of age died
from H. influenzae disease (1). HIV-infected infants
are at a several-fold increased risk of invasive
H. influenzae disease.
The objectives of surveillance H. influenzae are to: hh evaluate vaccine impact and monitor serotype
distribution
hh quantify disease burden and epidemiology to inform
vaccine introduction decisions (such as dosing hh identify immunization programme implementation
schedule and product choice) gaps and provide data to determine if changes in
vaccine policy are needed (such as booster doses).
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WHO Vaccine-Preventable Diseases Surveillance Standards
TYPES OF SURVEILLANCE RECOMMENDED
ENHANCED SURVEILLANCE
TARGET POPULATION
Two types of enhanced surveillance for H. influenzae
are possible. The target population is children aged 0–59 months for
all types of surveillance. Primary disease affects infants,
1. Expanded sentinel hospital surveillance while vaccine failures tend to occur in children > 1 year
Meningitis sentinel surveillance can be expanded of age (7). Hib disease is rare in older children and
to include pneumonia and sepsis (previously adults. In practice, however, older children and adults
referred to as Tier 2 IB-VPD surveillance). The may be included in enhanced surveillance systems
characteristics of this surveillance are the same as for bacterial meningitis, since pneumococcus and
meningitis sentinel surveillance: case-based, active meningococcus do occur in older age groups.
and prospective. Pneumonia and sepsis surveillance
should only be undertaken in hospitals of sufficient LINKAGES TO OTHER SURVEILLANCE
size to have a meaningful number of cases (500 Where possible, surveillance for H. influenzae should
cases per site per year for meningitis + pneumonia/ be integrated with that for other causes of bacterial
sepsis). While it is difficult to identify the etiology meningitis and pneumonia, such as pneumococcus and
of pneumonia, radiography can be used to identify meningococcus. When conducting sentinel surveillance
WHO-defined endpoint pneumonia, which is more for meningitis, pneumonia or sepsis, all three pathogens
specific for bacterial pneumonia such as that caused should be routinely tested for. Laboratory testing
by H. influenzae (6). for antimicrobial resistance can be integrated with
surveillance for other bacteria (such as typhoid).
2. Population-based surveillance for invasive
H. influenzae disease
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Haemophilus influenzae
Haemophilus influenzae
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WHO Vaccine-Preventable Diseases Surveillance Standards
CONFIRMED INVASIVE H. INFLUENZAE DISEASE Note that for blood, only culture confirms invasive
hh H. influenzae identified via culture from any normally Hib disease, as these other detection methods
sterile site (e.g., blood, CSF, pleural fluid, joint fluid) have not been shown to have enough specificity to
in a symptomatic person diagnosis Hib, particularly in children.
CASE INVESTIGATION
In sentinel hospital surveillance, all children aged surveillance approaches, patients with suspected
0–59 months with suspected meningitis meeting pneumonia and sepsis should also have appropriate
the suspected case definition should have a lumbar clinical specimens taken. Treatment of patients should
puncture to collect CSF unless the procedure is clinically not be delayed while awaiting collection of specimens or
contraindicated. CSF should be collected before results from the laboratory. In sentinel surveillance and
antibiotic administration, otherwise the laboratory may population-based surveillance, case report forms should
be unable to culture the pathogen and therefore unable be filled out on all suspected cases. In laboratory-based
to provide information on antimicrobial susceptibility. IPD surveillance, cases will be reported retrospectively,
However, a specimen should be obtained in all suspect and likely will already have been treated. Medical record
cases as bacterial pathogens can still be detected even follow-up should be done to gather key data elements.
after antimicrobial therapy has begun. For expanded
SPECIMEN COLLECTION
Care should be taken to minimize any risk of cross- »» The presence of blood in the CSF can affect
contamination during manipulation or aliquotting. cultures, since antibiotics in blood can inhibit
For example, use sterile dispensing technique with bacterial growth. If more than one tube is
appropriate pipettes, tips and tubes. The types of being collected, the first tube may contain
specimen that may be collected include CSF (meningitis contaminated blood from lumbar puncture and
cases), blood samples (meningitis, pneumonia and sepsis) should not be the tube sent to the microbiology
and pleural fluid (pneumonia cases). laboratory.
hh Blood
VOLUME OF SPECIMENS TO COLLECT
»» 1–3 mL is considered adequate for a child, and
hh CSF
5–10 mL for an adult.
»» 3 mL in total, 1 mL into each of three test tubes.
»» Collected blood should be diluted in blood
• Tube 1: Chemical analysis: protein and culture broth in order to obtain blood cultures.
glucose tests It is important to use appropriate ratios of blood
• Tube 2: Microbiological tests to culture broth for optimal bacterial growth.
• Tube 3: Record overall appearance; perform The recommendations of the culture broth
white blood cell count manufacturer should be closely followed.
»» If only one tube of CSF is available, it should • Add 1–3 mL of blood from a child to 20 mL
be given to the microbiological laboratory for of blood culture broth.
culture/PCR/antigen testing. However, an • Add 5–10 mL of blood from an adult to
aliquot of 50–100 µL should be spared from that 50 mL of blood culture broth.
tube for molecular testing.
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Haemophilus influenzae
Haemophilus influenzae
»» Collect prior to administration of antibiotics, »» Inoculated blood culture bottles should not be
whenever possible. placed in the refrigerator.
LABORATORY TESTING
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WHO Vaccine-Preventable Diseases Surveillance Standards
PCR is recommended on all suspected cases because Report all RDT results to clinical staff within one to two
bacterial culture might be inhibited if the case has hours of testing. Report CSF and blood culture results
already received antibiotics. As PCR capacities are to the clinicians daily if cultures are done in hospital
not always available at district or hospital level, the laboratory.
remaining volume of original non-manipulated CSF
can be frozen and sent to either a national or regional ANTIMICROBIAL RESISTANCE (AMR) TESTING
reference laboratory for further testing. hh To the greatest extent possible, sites should perform
Rapid diagnostic test kits (RDTs) can be used since they antimicrobial sensitivity testing for all H. influenzae
increase yield and provide results quickly for clinical isolates and evaluate these data by the following:
care and outbreak identification. In general, RDTs only antibiotic type and route, time of antibiotic
identify the species and not the serotype or serogroup. administration before culture, volume of fluid
There are two commonly used types of RDTs. Results cultured, geographic area and serotype (8).
should be interpreted according to manufacturer’s hh Recommended methods are disk diffusion
instructions. (modification of the Kirby-Bauer technique) and
antimicrobial gradient strip diffusion (9).
hh Immunochromatography: BinaxNOW® kit can
be used on CSF and pleural fluid for detection and
lower-level characterization of pneumococcus. While QUALITY ASSURANCE SYSTEMS
it identifies only S. pneumoniae and not H. influenzae, All of the above laboratory standards should be
it is recommended for use in cases of suspected complemented by good quality assurance and quality
meningitis to identify bacterial etiology. control systems to ensure that laboratory data generated
for surveillance are of good quality. WHO recommends
hh Latex agglutination testing (LAT): Commercial that laboratories participate in external quality
latex kits often have a short shelf life and can be
assessment (EQA) programmes and send out a selection
expensive.
of specimens and isolates for confirmatory testing to
Gram stain should not be used to confirm cases, but it is another level of laboratory (national, regional or global)
reliable and relatively inexpensive if staff are well trained for quality control (QC).
and reagents are quality controlled. On Gram stain, H.
Most sentinel site laboratories will not have the
influenzae are small, pleomorphic gram-negative rods or
necessary equipment to carry out higher level
coccobacilli with random arrangements.
characterization (serotyping, antimicrobial susceptibility
Report all RDT results to clinical staff within one to two or PCR), and thus should refer isolates and specimens
hours of testing. Report CSF and blood culture reports from suspected, probable and confirmed cases to
to the clinicians daily if cultures are done in hospital national or regional reference laboratories that are able
laboratory. to provide quality assurance and higher level testing of
CSF specimens. Each laboratory should be enrolled in
BLOOD an appropriate EQA/proficiency testing programme.
Blood culture can be used to diagnosis H. influenzae While not an explicit objective of surveillance for
meningitis, pneumonia and sepsis. The laboratory pneumococcus (or other IB-VPDs), such surveillance
methods for blood culture are the same for all systems can be used to build laboratory capacity globally
syndromes. However, the sensitivity of blood culture as well as identify gaps in laboratory capacity.
for H. influenzae pneumonia is lower than for the other
syndromes because only approximately 10–15% of H. LABORATORY NETWORKS
influenzae pneumonia cases are bacteremic. The Global Invasive Bacterial Vaccine-Preventable
Diseases (IB-VPD) Laboratory Network is a global
hh For blood culture with maximum yield of isolates,
network of > 100 laboratories that support invasive
subculture all negative cultures after five days of
bacterial disease surveillance (10). It is coordinated
incubation before they are discarded.
by WHO and Public Health England. IB-VPD has
hh PCR and RDTs are not used routinely on blood to developed standardized laboratory procedures and
diagnose H. influenzae due to low sensitivity and guidelines for data collection, and has implemented
specificity. quality assurance and quality control systems.
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Haemophilus influenzae
Haemophilus influenzae
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WHO Vaccine-Preventable Diseases Surveillance Standards
hh Additional minimal data elements for pneumonia/ REPORTING REQUIREMENTS AND
sepsis and IPD surveillance RECOMMENDATIONS
Report confirmed Hib cases to the Ministry of Health
»» Laboratory
monthly. Zero reporting (no cases) should be done
• Blood collection in sentinel surveillance sites. Aggregate reporting is
–– Blood specimen ID sufficient for routine reporting, even if case-based
surveillance is conducted. There are no global reporting
–– Date and time of collection
requirements for Hib.
–– Specimen collected before antibiotic
treatment
RECOMMENDED DATA ANALYSES
–– Date specimens sent to laboratory Sentinel hospital meningitis surveillance
* Date and time of blood specimen
hh Confirmed H. influenzae and Hib meningitis case
received at laboratory
counts, stratified by onset date (week, month, year),
* Culture done age group and sex.
~ Culture result
hh Probable and suspected meningitis case counts,
* Gram stain done stratified by the same groupings as confirmed cases.
~ Gram stain result
hh Confirmed H. influenzae and Hib meningitis death
• Pleural fluid (PF) collected counts and case-fatality ratios.
–– Pleural fluid pecimen ID
hh Probable and suspected meningitis death counts and
–– Date and time of collection case-fatality ratios.
–– Specimen collected before antibiotic
hh Median and range of duration of hospital stay for
treatment
all suspected meningitis hospitalizations and for
–– Date specimens sent to laboratory meningitis due to H. influenzae and Hib.
–– Date and time of pleural fluid specimen
hh Note: If IB-VPD surveillance is ongoing for other
received at laboratory
bacterial causes of meningitis (meningococcus and
–– Culture done pneumococcus), then a similar reporting structure
* Culture result should be used for laboratory-confirmed cases of
–– Gram stain done those etiologies.
* Gram stain result Sentinel hospital invasive H. influenzae disease
–– BinaxNOW® done surveillance (meningitis, pneumonia and sepsis)
* BinaxNOW® result hh Confirmed invasive H. influenzae and Hib disease
–– PCR done case counts, stratified by onset date (week, month,
* PCR results year), age group, sex and syndrome.
»» Catchment area population by age groups (0–5 hh Confirmed invasive H. influenzae and Hib disease
months, 6–11 months, 12–23 months, and 24–59 death counts and case-fatality ratios.
months) hh Suspected meningitis, pneumonia and sepsis death
counts and case-fatality ratios
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Haemophilus influenzae
Haemophilus influenzae
Population-based invasive H. influenzae disease hh Prioritize H. influenzae disease among other diseases
surveillance of public health importance.
hh Incidence of confirmed invasive H. influenzae and hh Advocate for and implement proper control
Hib disease, stratified by onset date (week, month, strategies such as immunization.
year), age group, sex and syndrome.
hh Evaluate the impact of immunization services and
identify areas with weak performance.
USING DATA FOR DECISION-MAKING
hh Determine the local disease burden (cases, deaths, hh Evaluate vaccine impact and effectiveness.
disability).
TABLE
Surveillance performance indicators for H. influenzae
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HOW TO CALCULATE
SURVEILLANCE
INDICATOR TARGET (NUMERATOR / COMMENTS
ATTRIBUTE
DENOMINATOR)
# of laboratory-
Proportion of
LABORATORY confirmed cases
laboratory- For sentinel hospitals that do
CONFIRMATION classified as Hib
confirmed cases > 60% serotyping or send isolates for
WITH SEROTYPE vs. non-Hib / # of
classified as Hib serotyping; ideal is ≥ 80%
DETERMINATION laboratory-confirmed
vs. non-Hib
cases x 100
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WHO Vaccine-Preventable Diseases Surveillance Standards
CLINICAL CASE MANAGEMENT
All cases of invasive H. influenzae disease should be possibly mechanical ventilation might be necessary. Take
hospitalized and promptly treated with intravenous CSF and blood samples before antibiotic treatment,
(or intramuscular) antibiotics to which the bacteria are if possible. Treat patient with presumptive antibiotics
susceptible. Supportive care including fluids, oxygen and without waiting for laboratory results.
Although most Hib disease is sporadic, Hib can cause influenzae disease. If the serotype is the same among
outbreaks in setting such as daycare centers. Sentinel H. influenzae cases, this strengthens the evidence for an
site surveillance is not designed to identify all outbreaks epidemiologically linked cluster.
since they will be geographically limited, so other types
of surveillance with greater geographic coverage will be CHANGES TO SURVEILLANCE
needed to identify outbreaks. DURING AN OUTBREAK
No change to surveillance is generally needed during an
DEFINITION OF AN OUTBREAK outbreak.
There is no accepted definition of a H. influenzae
or Hib cluster or outbreak. Some have considered a PUBLIC HEALTH RESPONSE
cluster of serious pneumococcal disease to be two or Reactive vaccination is not an established strategy for H.
more temporally linked cases that occurred in a closed influenzae outbreaks. Prompt recognition of cases and
setting (11), and this could also be applied to H. timely treatment with antibiotics is important.
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Haemophilus influenzae
Haemophilus influenzae
hh Some countries in the African meningitis belt, hh IB-VPD surveillance can be leveraged to monitor
which have significant meningococcal disease other VPDs and non-VPDs such as typhoid,
burden and limited confirmation capacity, perform diphtheria and pertussis, and can help to build
syndromic meningitis surveillance. Typically, this global bacteriology capacity, especially in a time
is part of the Integrated Disease Surveillance and where antimicrobial resistance is a high public health
Response (IDSR). Meningitis surveillance is not priority.
pathogen-specific and covers the three vaccine
hh Measuring the impact of Hib conjugate vaccine
preventable disease pathogens associated with
can be challenging. The impact of Hib conjugate
bacterial meningitis: N. meningitidis, S. pneumoniae
vaccines can be measured using surveillance data and
and H. influenzae. These require laboratory capacity
observational studies, such as case-control studies
to identify and distinguish. This surveillance can be
and time series analysis of secondary data sources
nationwide or regional, and is typically aggregate
(12). The most appropriate method for measuring
passive surveillance. The objective of this surveillance
vaccine impact should be chosen based on the
is to detect outbreaks for a rapid public health
setting, and multiple methods and outcomes may
response. For meningococcus, the public health
need to be used to accurately measure impact.
response includes reactive vaccination; for H.
influenzae and pneumococcal outbreaks, reactive
vaccination is not an accepted strategy.
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WHO Vaccine-Preventable Diseases Surveillance Standards
REFERENCES
REFERENCES CITED
1. World Health Organization. Estimated Hib and pneumococcal deaths for children under 5 years of age, 2008. In:
Immunization, vaccines and biologicals [website]. Geneva: World Health Organization; 2013 (http://www.who.int/
immunization/monitoring_surveillance/burden/estimates/Pneumo_hib/en/).
2. World Health Organization. Haemophilus influenzae type b (Hib) vaccination position paper – September 2013. Wkly
Epidemiol Rec. 2013;88(39):413–28 (http://www.who.int/wer/2013/wer8839.pdf ?ua=1).
3. von Gottberg A, Cohen C, Whitelaw A, Chhagan M, Flannery B, Cohen AL, et al. Invasive disease due
to Haemophilus influenzae serotype b ten years after routine vaccination, South Africa, 2003–2009. Vaccine. 2012;30(3):565-
71. doi: 10.1016/j.vaccine.2011.11.066.
4. World Health Organization. WHO-coordinated Sentinel Hospital VPD Surveillance Networks. In: Immunization, vaccines
and biologicals [website]. Geneva: World Health Organization; 2018 (http://www.who.int/immunization/monitoring_
surveillance/burden/vpd/sentinel_surveillance/en/).
5. World Health Organization. Surveillance tools for meningitis sentinel hospital surveillance: field guide to rapidly estimate the
hospital catchment population (denominator) and the annual rate of hospitalisations. Geneva: World Health Organization;
2015 (http://www.who.int/immunization/documents/monitoring/WHO_IVB_15.02/en/).
6. World Health Organization. Standardization of interpretation of chest radiographs for the diagnosis of pneumonia in
children. Geneva: World Health Organization; 2001 (http://apps.who.int/iris/bitstream/10665/66956/1/
WHO_V_and_B_01.35.pdf).
7. Ladhani S, Heath PT, Slack MP, McIntyre PB, Diez-Domingo J, Campos J, et al. Haemophilus influenzae serotype b
conjugate vaccine failure in twelve countries with established national childhood immunization programmes. Clin Microbiol
Infect. 2010;16(7):948–54. doi: 10.1111/j.1469-0691.2009.02945.x.
8. European Society of Clinical Microbiology and Infectious Diseases. EUCAST guidance documents in susceptibility testing.
In: European Committee on Antimicrobial Susceptibility Testing [website]. Basel, Switzerland: European Society of Clinical
Microbiology and Infectious Diseases; 2016 (http://www.eucast.org/guidance_documents/).
9. Centers for Disease Control and Prevention & World Health Organization. Laboratory methods for the diagnosis of meningitis
caused by Neisseria meningitidis, Streptococcus pneumoniae, and Haemophilus influenzae, 2nd edition. Geneva: World Health
Organization; 2011 (http://www.who.int/immunization/research/development/WHO_IVB_11.09_eng.pdf ?ua=1).
10. World Health Organization. Invasive Bacterial Vaccine Preventable Diseases Laboratory Network. In: Immunization, vaccines
and biologicals [website]. Geneva: World Health Organization; 2017 (http://www.who.int/immunization/monitoring_
surveillance/burden/laboratory/IBVPD/en/).
11. Basarab M, Ihekweazu C, George R, Pebody R. Effective management in clusters of pneumococcal disease: a systematic review.
Lancet Infect Dis. 2011;11(2):119–30. doi: 10.1016/S1473-3099(10)70281-4.
12. World Health Organization. Measuring impact of Streptococcus pneumoniae and Haemophilus influenzae type b conjugate
vaccination. Geneva: World Health Organization; 2012 (http://apps.who.int/iris/bitstream/10665/75835/1/WHO_
IVB_12.08_eng.pdf).
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Haemophilus influenzae