05/07/2020 NCBI Blast:AF028688:Methanobacterium bryantii strain...

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BLAST ® » Global Alignment » results for RID-G3DK2SKH114

Job Title AF028688:Methanobacterium bryantii strain... ...

RID G3DK2SKH114 Search expires on 07-06 19:15 pm
Program Needleman-Wunsch alignment of two sequences
Query ID AF028688.1 (nucleic acid)
Query Descr Methanobacterium bryantii strain RiH2 16S ribosomal RNA gene, complete sequence ...
Query Length 1476
Subject ID NR_074177.1 (nucleic acid)
Subject Descr Methanospirillum hungatei JF-1 16S ribosomal RNA, complete sequence ...
Subject Length 1466

Descriptions

Description Score Percent Ident Accession

Methanospirillum hungatei JF-1 16S ribosomal RNA, complete sequence 1322 78.00% NR_074177.1

Graphic Summary

Distribution of the top 1 Blast Hits on 1 subject sequences

Query

1 250 500 750 1000 1250

Alignments
Alignment view Pairwise CDS feature Restore defaults

Methanospirillum hungatei JF-1 16S ribosomal RNA, complete sequence

Sequence ID: NR_074177.1 Length: 1466 Number of Matches: 1
Range 1: 1 to 1466

NW Score Identities Gaps Strand Frame

1322 1159/1481(78%) 20/1481(1%) Plus/Plus

Query 1 CTTCCGGTTGATCCCGCCGGAGGCCACTGCTTTTGGGGTTCGATTAAGCCATGCAAGTTG 60
||| ||||||||| ||| |||||||||||| | |||||| || |||||||||| ||| |
Sbjct 1 ATTCTGGTTGATCCTGCCAGAGGCCACTGCTATCGGGGTTTGACTAAGCCATGCGAGTCG 60
Query 61 AACGAATCTTCGGATTCGTGGCGAACGGCTCAGTAACACGTGGATAACCTGCCCTTAGGA 120
| | | | ||| ||| || ||||||||||||||||| || ||||||| | ||
Sbjct 61 AGAGGTGCAA-GACCTCG--GCGTACTGCTCAGTAACACGTGGACAATCTGCCCTGAAGA 117
Query 121 CTGGGATAACCCTGGGAAACTGGGGATAATACCGGATATTTAGGAGTTCCTGGAATGGTC 180
|||||| || |||||||||||| |||||| ||| || | | |||||||| |
Sbjct 118 GGAGGATAATCCCGGGAAACTGGGGGTAATACTCCATAGTTCGTGCTGACTGGAATGTTA 177
Query 181 TTCTATTTAAATGTTCAGGCGCCTAAGGATGGATCTGCGGCAGATTAGGTAGTTGGTGGG 240
| | | ||| | || | ||| | |||||| |||||||| ||||||||||||| ||||
Sbjct 178 TGCGAACGAAA-GATCCGTCGCTTCAGGATGAGTCTGCGGCCGATTAGGTAGTTGTTGGG 236
Query 241 GTAATGGCCCACCAAGCCTTTGATCTGTACGGGTTGTGAGAGCAAGAGCCCGGAGATGGA 300
|||| |||||| ||||||| | ||| |||||||||||| |||||||||||||||||||||
Sbjct 237 GTAACGGCCCAACAAGCCTGTCATCGGTACGGGTTGTGGGAGCAAGAGCCCGGAGATGGA 296
Query 301 ACCTGAGACAAGGTTCCAGGCCCTACGGGGCGCAGCAGGCGCGAAACCTCCGCAATGCAC 360
|||||||| | |||||||||||||||||||||||||||||||| || | ||||
Sbjct 297 TTCTGAGACACGAATCCAGGCCCTACGGGGCGCAGCAGGCGCGAAAACTTTACCATGCGG 356
Query 361 GAAAGTGCGACGGGGGGACCCCAAGTGCCACTCTTAACGGGGTGGCTTTTTTTGAGTGTA 420
| || | || || ||||| ||||||| || || ||||| | ||||||
Sbjct 357 GCAACCGTGATAAGGAAACCCCGAGTGCCAGC----ACAGGCTGGCTGTCCACCAGTGTA 412
Query 421 AAAAGCTTTGAGAATAA-GAGCTGGGCAAGACCGGTGCCACCCGCCGCGGTAACACCGGC 479
|| | || | ||| || | || ||||||||||||||||| |||||||||||| ||||||
https://blast.ncbi.nlm.nih.gov/Blast.cgi 1/3
05/07/2020 NCBI Blast:AF028688:Methanobacterium bryantii strain...
|| | || | ||| || | || ||||||||||||||||| |||||||||||| ||||||
Sbjct 413 AATAACTG-GTGAAGAAAGGGCCGGGCAAGACCGGTGCCAGCCGCCGCGGTAATACCGGC 471
Query 480 AGCTCAAGTGGTGGCCATTTTTATTGGGCCTAAAGCGTTCGTAGCCGGCTTGATAAGTCT 539
|||| |||||||||| | ||| ||||| ||||| || |||||| || | | |||||
Sbjct 472 GGCTCGAGTGGTGGCCGCTATTACTGGGCTTAAAGGGTCCGTAGCTGGATATACAAGTCC 531
Query 540 CTGGTGAAATCCCATAGCTTAACTG-TGGGAATTGCTGGAGATACTATTAGGCTTGAGGC 598
|| | ||||||| ||||||| | |||| || | || || ||| | || | | |
Sbjct 532 CTTGAGAAATCCGCCGGCTTAACCGGTGGGCGTT-CAGGGGAAACTGTATTTCTAGGGAC 590
Query 599 CGGGAGAGGTTAGGGGTACTCCCAGGGTAGGGGTGAAATCCTATAATCCTGGGAGGACCA 658
|||||||||| || |||||| || ||||||| |||||||||| |||||| || ||||||
Sbjct 591 CGGGAGAGGTGAGAGGTACTGCCGGGGTAGGAGTGAAATCCTGTAATCCCGGTGGGACCA 650
Query 659 CCTGTGGCGAAGGCGCCTAACTGGAACGGACCTGACGGTGAGTAACGAAAGCCAGGGGCG 718
||| |||||||||| || || |||||| | ||| ||||| |||||||| |||| |
Sbjct 651 CCTATGGCGAAGGCATCTCACCAGAACGGGTCCGACAGTGAGGGACGAAAGCTGGGGGAG 710
Query 719 CGAACCGGATTAGATACCCGGGTAGTCCTGGCCGTAAACGATGCGGACTTGGTGTTGGAA 778
| |||||||||||||||||||||||||| || |||||||||||| | ||||| |
Sbjct 711 CAAACCGGATTAGATACCCGGGTAGTCCCAGCTGTAAACGATGCGCGTTAGGTGTGTCAG 770
Query 779 TGGCTTCGAGCTGCTCCAGTGCCGAAGGGAAGCTGTTAAGTCCGCCGCCTGGGAAGTACG 838
|| | || | || ||||||||||||| | || || ||||||||||| ||||||
Sbjct 771 TGACCACGTGTCACTGAGGTGCCGAAGGGAAACCGTGAAACGCGCCGCCTGGGGAGTACG 830
Query 839 GTCGCAAGACTGAAACTTAAAGGAATTGGCGGGGGAGCACCACAACGCGTGGAGCCTGCG 898
|||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 831 GTCGCAAGGCTGAAACTTAAAGGAATTGGCGGGGGAGCACCACAACGGGTGGAGCCTGCG 890
Query 899 GTTTAATTGGATTCAACGCCGGACATCTCACCAGGGGCGACAGCAGAATGATGGCCAGGT 958
||||||| ||| ||||||||||| |||||||| | |||||| ||||||| | | ||
Sbjct 891 GTTTAATCGGACTCAACGCCGGAAATCTCACCGGATAAGACAGCTGAATGATAGTCGGGA 950
Query 959 TGACGACCTTGCTTGACAAGCTGAGAGGAGGTGCATGGCCGCCGTCAGCTCGTACCGTGA 1018
||| ||| | |||||| ||||||||||||||||||||||| |||||| |||||| ||||
Sbjct 951 TGAAGACTCTACTTGACTAGCTGAGAGGAGGTGCATGGCCGTCGTCAGTTCGTACTGTGA 1010
Query 1019 GGCGTCCTGTTAAGTCAGGCAACGAGCGAGACCCACGCCCTTAGTTACCAGCGGATCCTC 1078
|| ||||||| |||||||||||||||||||||||||| |||| ||||| |||
Sbjct 1011 AGCATCCTGTTTAGTCAGGCAACGAGCGAGACCCACGCGAGCAGTTGCCAGCTTGACCTT 1070
Query 1079 CGGGATGCCGGGCACACTAAGGGGACCGCCAGTGATAAACTGGAGGAAGGAGTGGACGAC 1138
|||| || ||| ||||| |||||||| || |||| |||||||||| ||| | ||
Sbjct 1071 CGGGTTGATGGGGACACTGCTCGGACCGCCTCTGCTAAAGGGGAGGAAGGAATGGGCAAC 1130
Query 1139 GGTAGGTCCGTATGCCCCGAATCCCCTGGGCTACACGCGGGCTACAATGGCTATGACAAT 1198
|||||||| | ||||||||||| | ||||||||||||||||||||||| | ||||||
Sbjct 1131 GGTAGGTCAGCATGCCCCGAATTATCCGGGCTACACGCGGGCTACAATGGACAGGACAAT 1190
Query 1199 GGGTTCCGACACTGAAAGGTGAAGGTAATCTCCTAAACATAGTCTTAGTTCGGATCGAGG 1258
||||| |||||| || |||||| | ||||||||||||| | | ||||||||| | ||
Sbjct 1191 GGGTTTCGACACCGAGAGGTGAGGATAATCTCCTAAACCTGTCCGAAGTTCGGATTGCGG 1250
Query 1259 GCTGTAACCTGCCCTCGTGAAGCTGGAATGCGTAGTAATCGCGTGTCATAATCGCGCGGT 1318
| |||||| ||| | |||||||||||| |||||||||||||| ||| || |||||||
Sbjct 1251 GTTGTAACTCACCCGCATGAAGCTGGAATCCGTAGTAATCGCGTTTCAACATAGCGCGGT 1310
Query 1319 GAATACGTCCCTGCTCCTTGCACACACCGCCCGTCACGCCACCCAAAAAGGGTTTGGATG 1378
||||| |||||||||||||||||||||||||||||| |||||| | ||| | ||||
Sbjct 1311 GAATATGTCCCTGCTCCTTGCACACACCGCCCGTCAAACCACCCGAGTGAGGTCTTGATG 1370
Query 1379 AGGCC---TCAGTCTTTGGTTGGGGTCGAATCTGGGTTCTTTGAGGAGGGCGAAGTCGTA 1435
||| ||||| | ||| |||||||||||| | ||| ||| ||||||||
Sbjct 1371 AGGATGTATCAGTGATATGTT-----CGAATCTGGGTTTTGCAAGGGGGGTTAAGTCGTA 1425
Query 1436 ACAAGGTAGCCGTAGGGGAACCTGCGGCTGGATCACCTCCT 1476
|||||||||||||||||||| ||||||||||||||||||||
Sbjct 1426 ACAAGGTAGCCGTAGGGGAATCTGCGGCTGGATCACCTCCT 1466

Taxonomy

Reports
Lineage

Organism Blast Name Score Number of Hits Description

Methanospirillum hungatei JF-1 euryarchaeotes -1.0 1 Methanospirillum hungatei JF-1 hits

Organism

Description Score E value Accession

Methanospirillum hungatei JF-1 [euryarchaeotes ]

https://blast.ncbi.nlm.nih.gov/Blast.cgi 2/3
05/07/2020 NCBI Blast:AF028688:Methanobacterium bryantii strain...

Description Score E value Accession

Methanospirillum hungatei JF-1 16S ribosomal RNA, complete sequence -1.0 0.0 NR_074177

Taxonomy

Taxonomy Number of hits Number of Organisms Description

Methanospirillum hungatei JF-1 1 1 Methanospirillum hungatei JF-1 hits

Dot Plot

Plot of AF028688.1 vs NR_074177.1

Top

https://blast.ncbi.nlm.nih.gov/Blast.cgi 3/3