You are on page 1of 9

Available online at www.sciencedirect.

com

ScienceDirect

Recent advances in single cell protein use as a feed


ingredient in aquaculture
Shawn W Jones1, Alon Karpol2, Sivan Friedman2,
Biniam T Maru1 and Bryan P Tracy1

The global demand for high-quality, protein-rich foods will versus 1.4–1.8 for poultry, 2.6–4.4 for pork, and 3.5–9 for
continue to increase as the global population grows, along with beef. Consequently, aquaculture contributes to a more
income levels. Aquaculture is poised to help fulfill some of this sustainable animal protein industry, and as we review,
demand, and is thus the fastest growing animal protein single cell protein (SCP) is poised to play a major role in
industry. A key challenge for it, though, is sourcing a its future success.
sustainable, renewable protein ingredient. Single cell protein
(SCP) products, protein meals based on microbial or algal
Aquaculture diets generally have higher crude protein
biomass, have the potential to fulfill this need. Here, we review
content, ranging from 35 60 wt%, compared to terres-
potential sources of SCP strains and their respective
trial livestock at 12 26 wt%. Moreover, many aquacul-
production processes, highlight recent advances on
ture markets are carnivorous species, whereas most
identification of new SCP strains and feedstocks, and, finally,
terrestrial livestock are herbivores. Thus, plant-based
review new feeding trial data on important aquaculture species,
protein ingredients are better suited to terrestrial live-
specifically Atlantic salmon, rainbow trout, and whiteleg
stock than many aquaculture species. Historically, fish-
shrimp.
meal (i.e. ground, dried forage fish and/or fish trimmings
and waste) has been the preferred protein ingredient in
Addresses
1
White Dog Labs, Inc., 239 Lisa Dr., New Castle, DE 19720, USA aquaculture because of high crude protein, high essen-
2
White Dog Labs, Israel Prof. A.D. Bergman St. 2b, Rehovot, 7670504, tial amino acid (EAA) and ‘completeness’ of the ingre-
Israel dient. However, aquaculture competes with fishmeal
use in swine, poultry, and other animal diets, and fish-
Corresponding author: Tracy, Bryan P (btracy@whitedoglabs.com)
meal production cannot scale with growth of all these
industries without jeopardizing forage fish fisheries.
Current Opinion in Biotechnology 2020, 61:189–197 Even with diminishing inclusion of fishmeal in aqua-
This review comes from a themed issue on Food biotechnology culture feeds (Figure 1b), an estimated shortage ranging
Edited by Mark Blenner and Jan-Peter van Pijkeren
from 0.4 to 1.32 million metric tons of fishmeal could
occur by 2050, significantly impairing aquaculture
For a complete overview see the Issue and the Editorial
industry growth. Plant-based ingredients can be refined
Available online 25th January 2020 to improve compatibility with aquaculture diets, for
https://doi.org/10.1016/j.copbio.2019.12.026 example, removing anti-nutritionals like phytic acid,
0958-1669/ã 2020 The Author(s). Published by Elsevier Ltd. This is an but this increases cost and most ‘early’ wins have been
open access article under the CC BY license (http://creativecommons. accomplished for species with greatest nutritional
org/licenses/by/4.0/). knowledge, for example, salmonids. Thus, there is
demand for more suitable protein ingredients that main-
tain feed performance, benefit aquaculture health and
stabilize supply and economics during industry expan-
Introduction
sion. SCP has the potential to deliver multiple solutions
Seafood, wild-catch and aquaculture, is the largest animal
through a myriad of products and production
protein industry in the world (189 million tons in 2013 -
approaches, but considerable research, development
Figure 1a) [1]. Wild-catch tonnage has been stable since
and particularly scale-up is still required. Here, we
1990 at 90 million tons; thus, aquaculture accounts for
review recent developments in SCP production modali-
all growth. In fact, aquaculture has grown faster than any
ties and feed trials, in addition to a brief introduction on
animal protein sector at 7% compound annual growth
organisms and feedstocks.
rate over past two decades compared to 4% for poultry
[1]. Feed is a major cost in livestock production, and
protein ingredients particularly dominate aquaculture SCP organisms
feed cost. Thus, efficient feed and particularly protein SCP products can be prepared from different microbial
conversion is essential to manage production costs and sources, including microalgae, yeast and other fungi, and
improve the sustainability of aquaculture. Fortunately, bacteria (Table 1). All are actively being investigated and
aquaculture species exhibit low feed conversion ratios commercialized and exhibit unique advantages and
(FCRs) of 1.1–1.6 kg of feed per kg of edible seafood challenges.

www.sciencedirect.com Current Opinion in Biotechnology 2020, 61:189–197


190 Food biotechnology

Figure 1

(a)
500

Total
400 Seafood
Million Metric Tons

300

200

100

0
1990 1995 2000 2005 2010 2015 2020 2025
Beef Pork Poultry Wild-catch Seafood Aquaculture Seafood

(b)
3.5
6.0%

Fishmeal Inclusion (wt%)


3.0
5.0%
Fishmeal (MMT)

2.5
4.0%
2.0

1.5 3.0%

1.0 2.0%

0.5 1.0%

0.0 0.0%
2000 2005 2010 2015 2020 2025 2030 2035 2040 2045 2050

Fishmeal Consumption in Aquaculture Fishmeal Inclusion Level


Fishmeal Inclusion Level (Scenario 1) Fishmeal Shortage (Scenario 1)
Fishmeal Inclusion Level (Scenario 2) Fishmeal Shortage (Scenario 2)
Current Opinion in Biotechnology

Growth of aquaculture industry and potential shortage of fishmeal. (a) Total animal protein production in a million metric tons from 1990 to
2025 [62]. (b) Fishmeal consumption for aquaculture applications through 2015 and projected consumption through 2050 [62] is presented (blue
line). Average fishmeal inclusion (green line) from known data through 2015 and projected growth of aquaculture through 2050 [62] with the
assumed flat supply of fishmeal. Inclusion is calculated by dividing the fishmeal consumption (blue line) by total feed, which is calculated by
multiplying aquaculture output (Figure 1a) by an average feed conversion ratio (FCR) of 1.2. Two alternative scenarios, in which fishmeal inclusion
levels do not achieve targeted reductions, are considered: Scenario 1 (solid red) and Scenario 2 (dashed red). Scenario 1 assumes only 85% of
the reduction target is met, and Scenario 2 assume only 50% of the reduction target is met.

Microalgae acid (EPA) and docosahexaenoic acid (DHA)) [3] and


As recently reviewed by Tibbetts [2], microalgae can be carotenoids, namely astaxanthin — an antioxidant, immu-
an SCP source with relatively high crude protein content. nostimulant [4,5] and pink pigment for salmon and
However, interest seems more motivated by potential shrimp [6] for example by the strain Aurantiochytrium
production of omega-3 fatty acids (i.e. eicosapentaenoic Sp. [7].

Current Opinion in Biotechnology 2020, 61:189–197 www.sciencedirect.com


Single cell protein advances for aquaculture use Jones et al. 191

Table 1

Summary of SCP sources and current examples

SCP Protein content Special characteristics Example of specific Challenges Current commercial
sources range organisms activities
Microalgae 60–70% [2,10]  Phototrophic growth  Chlorella vulgaris  Economical scale-up  Cellana
 Production of  Desmodesmus sp.  Cell disruption to  Pond Technologies
omega-3 fatty acids release nutrients  BioProcess Algae

Yeasts 30–50% [10]  Use of a  Saccharomyces  Improve protein  ADM


variety of feedstocks cerevisiae and EAA content  Alltech
 Production of  Candida utilis  Flint Hills
vitamins and Resources
micronutrients  ICC Brazil
 Pacific Ethanol

Bacteria 50–80% [10]  High protein content  Methylococcus  Palatability issues  Calysta
 Growth on C1 capsulatus  Kiverdi
substrates  Cupravidus nectar  KnipBio
 NovoNutrients
 White Dog Labs

Protists 10–20% [63,64]  Production of  Schizochytrium  Improve protein  Veramaris


omega-3 fatty limacinum content
acids

Yeast and other fungi Production processes


Yeasts and fungi have long histories as animal feed The goal of SCP production is to maximize cellular
ingredients, particularly for terrestrial livestock and direct growth and co-product yields in economically viable
human consumption, like Quorn. The most widely approaches, and the feedstock has a tremendous, if not
known species are Saccharomyces cerevisiae, various Asper- the greatest, influence on economics. A sampling of
gillus and Fusarium venenatum, but other strains are attract- recent research into various feedstock use is summa-
ing interest for protein replacement such as Candida utilis rized in Table 2, and includes general advantages and
and Kluyveromyces marxianus [8]. In most cases though, the disadvantages. We recommend Ritala et al. [10] for a
aim is to deliver additional benefits such as Rhodotorula more comprehensive review on various feedstock
mucilaginosa [9] biomass exhibiting immunomodulation usage. Our updated survey of the literature, since
and antioxidant benefits, and Yarrowia lipolytica produc- 2017, confirms strong interest to utilize ‘wastes,’ resi-
ing EPA, which was previously commercialized by dues and by-products, as they are presumed to support
DuPont and AquaChile as Verlasso salmon [3]. a more circular economy and lower cost. However,
practical experience urges deeper consideration on
Bacteria capital and processing costs to control and upgrade
Bacterial SCP strains can produce very high crude protein such feedstocks, along with the potential regulatory
content (>80 wt%) and EAA values, along with vitamins, challenges, and constrained supply both in quantity
phospholipids, and other functional compounds and can and geography. Worth noting, recent trends continue
also utilize a wide-range of feedstocks [10,11,12]. As we to promote methane, syngas and off-gas feedstocks
detail later, feedstock diversity has motivated deeper such as the classic methane to SCP approach [18] or
exploration of bacteria, largely those that utilize methane, knallgas bacteria [61]. Also, there is an emerging
methanol, syngas, CO2 and H2, and second generation opportunity to better valorize low-value co-product
sugars. streams from dry-grind corn ethanol plants, like the
evaporated solubles [27].
Protists
Previously classified as microalgae or fungi, Labyrinthulo- Such feedstock diversity requires diverse modalities
mycetes are actually heterotrophic marine protists [13] and of growth including autotrophs, photoautotrophs,
constitute three different categories: thraustochytrids, apla- chemoautotrophs, methylotrophs, heterotrophs and
nochytrids, and labyrinthulids. Thraustochytrids, like mixotrophs. Consequently, many different production
Schizochytrium limacinum (Aurantiochytrium limacinum), are processes are being explored (Table 3), and we review
of particular interest because of their ability to produce some of the recent advances and current areas of
omega-3 fatty acids [14,15]. research focus.

www.sciencedirect.com Current Opinion in Biotechnology 2020, 61:189–197


192 Food biotechnology

Table 2

Potential feedstocks for SCP production

Feedstock sources Examples Advantages Disadvantages


Wastewaters  Municipal waste [28]  Potential for tipping fees  Limited control or significant
 Industrial wastewater [65]  Most circular economy appeal processing
 Supply constrained and
defined in scale
 Major regulatory challenges

Industrial & Agricultural  Off-gases (e.g. steel mill)  Lowest cost  Less control or significant processing
Residues  Biogas [66]  Enhanced valorization  Supply constrained and defined in scale
 Agricultural wastes  Bio-potential  Significant regulatory challenges
[22,26,29,67]  Circular economy appeal
 Cellulosic biomass

Bioindustry  Brewery residues [24]  Lower cost  Limited supply


By-Products  Dry-grind ethanol  Enhanced valorization  Processing often required
co-products  Large quantity point sources  Variable composition
 Starch processing waters  Established processing and  Output of other processes that
 Biogas infrastructure could change
 CO2 [68]  Regulatory challenges

Fit for Purpose  Dextrose  Low cost  Higher comparable cost


 Sucrose  Best defined  More limited to locations with
 Corn starch  Most controlled developed supply logistics
 Molasses  Abundant and expandable supply  Less circular economy appeal
 Soybean meal  More regulatory certainty
 Methane  More conversion options
 Methanol  Developed infrastructure
 Ethanol
 Syngas
 H2 + CO2

Photoautotrophs known as the Wood-Ljungdahl pathway), methanogens


In this modality, growth utilizes inorganic carbon sources which convert CO2/H2 to methane, and hydrogen-oxidiz-
and light as the energy source. The major feedstocks are ing bacteria (also known as knallgas bacteria), which
CO2, water, and light, making this a desirable platform oxidize H2 with O2 as the final electron acceptor and
from a renewable, sustainable point-of-view, but several fix CO2 through different pathways, such as the Calvin-
hurdles must be overcome for broader commercialization. Benson-Bassham cycle or the reverse Krebs cycle. Similar
First is maintaining a high surface area to allow for light to photoautotrophs, chemoautotrophs are attractive
penetration into the bioreactor, second is achieving high because of the relatively inexpensive feedstock and
gas flow rates into the bioreactors and third is promoting ability to fix CO2. There are several significant challenges
higher cell densities to reduce water volumes. Yen et al. though including: 1) solubilizing the gases, particularly
[16] present comprehensive updates, beyond the scope H2, 2) achieving sufficient growth rates to realize ade-
of this review, on where the technology stands, how it is quate volumetric productivity, and 3) obtaining high cell
being commercially deployed and where the challenges mass yields. Acetogens and methanogens must produce
persist. Microalgae are the primary focus of this modality, other carbon metabolites as the final electron acceptors,
but some bacteria, particularly purple photosynthetic such as acetate or butyrate for acetogens and methane
bacteria (PPB) [17], are also capable of photoautotrophic for methanogens, so these co-products must also be
growth. valorized. Some commercial progress has been made
on hydrogen-oxidizing bacteria, for example, Cupravidus
Chemoautotrophs nectar and related organisms are being pursued by Novo-
In this modality, an inorganic carbon source is required Nutrients (Sunnyvale, CA), Solar Foods (Helsinki,
along with an inorganic energy source. Bacteria mainly Finland), and Kiverdi (Hayward, CA).
constitute this modality, though there is great diversity on
how growth is achieved. For SCP production, there are Methylotrophs
three main categories: acetogens which utilize CO2/CO/ Methane utilizers and some methanol utilizers do not
H2 through the reductive acetyl-CoA pathway (also easily fit into either the traditional autotroph or

Current Opinion in Biotechnology 2020, 61:189–197 www.sciencedirect.com


Single cell protein advances for aquaculture use Jones et al. 193

Table 3

SCP production processes

Cultivation Operation Growth modality Capital & operational considerations Emerging commecial examples
Aerobic Bioreactor  Heterotrophs  High cell mass yield  Methanol, glycerol or ethanol –
 Mixotrophs  High capital costs KnipBio
 High energy consumption  Glucose – Veramis
 Sterile operation  Cellulose – Arbiom & Menon
 Significant installed industrial capacity

Anaerobic Bioreactor  Heterotrophs  Low cell mass yield  Glucose or glycerol – White Dog
 Mixotrophs  Low capital costs Labs
 Low energy consumption  Yeast sepatiation – Fluid Quip
 Requires metabolite production and valorization Technologies & ICM
 Non-sterile operation
 Most installed industrial capacity

Gas Bioreactor  Methylotrophs  Variable cell mass yield  Methane – Calysta, Unibio, &
 Chemoautotrophs  High capital costs String Bio
 Mixotrophs  High energy consumption  CO2, H2 & O2 – Kiverdi, NovoNu-
 Could require metabolite production and trients & Solar Foods
valorization  CO2 & H2 – LanzaTech
 Sterile & non-sterile operation  Glucose & syngas – White Dog
 Limited installed industrial capacity Labs

Photosynthetic Bioreactor  Photoautotrophs  High cell mass yield  CO2 & light – BioProcess Algae &
 Mixotrophs  High capital costs Pond Technologies
 High energy consumption
 Sterile operation
 No known installed industrial capacity

Open Cultivation Systems  Photoautotrophs  Variable cell mass yield  Brewing by-products – iCell Sus-
 Heterotrophs  Low capital costs tainable Nutrition
 Mixotrophs  Low energy consumption  Open photosynthetic system –
 Non-sterile operation Cellana
 Limited installed industrial capacity

heterotroph category, as they consume an organic C1 targeted astaxanthin. However, economics again caused
feedstock both for carbon and energy. Carbon fixation this process to be canceled. Recently, this process has
can occur through a number of different pathways, such as been revived by several companies: Unibio (Lyngby,
the ribulose biphosphate cycle, the ribulose monopho- Denmark) making UniProtein1 from methane, Calysta
sphate cycle or the serine cycle, but the key intermediate (Menlo Park, CA) making FeedKind1 from methane,
is formaldehyde, made by oxidation of the methane or String Bio (Bangalore, India), and KnipBio (Lowell, MA)
methanol. Similar to chemoautotrophs, a major technical making KnipBio Meal from methanol. KnipBio engineers
hurdle is dissolving the feedstocks methane and oxygen their microbes to also make carotenoids [20] and taurine
into an aqueous broth. Another significant challenge is [21], and announced plans to scale-up with ICM (Col-
heat removal from the fermentation as this approach is wich, KS). It is important to note that KnipBio Meal, to
very exothermic. the best of our knowledge, is the first genetically engi-
neered SCP product to obtain GRAS (generally regarded
as safe) recognition by the US Food and Drug
Methylotrophs have an established commercial history.
Administration.
The first bacterial SCP product was Pruteen, made from
Methylophilus methylotrophus by Imperial Chemical Indus-
tries (ICI) from a methanol feedstock from the late 1970s Heterotrophs
through the mid-1980s [18,19]. This process was revived Heterotrophs must consume organic carbon as a feed-
in the 1990s by Norferm, a Statoil subsidiary, using stock and encompass all possible SCP sources. Arguably
Methylococcus capsulatus and a methane feedstock to pro- the most advanced process scheme, a wide range of
duce Pronin. This product was targeted for aquaculture feedstocks can be used to achieve SCP production, giving
applications, and a joint venture with DuPont produced a this modality a great deal of flexibility. Recent research
strain that also produced carotenoids and specifically interest has largely focused on waste or cellulosic

www.sciencedirect.com Current Opinion in Biotechnology 2020, 61:189–197


194 Food biotechnology

feedstock utilization that is well discussed elsewhere derived from Nanofrustulum and Tetraselmis on salmon. In
[22–26,27,28–31], while current commercial products the first study, defatted Desmodesmus sp. SCP could be
have largely focused on valorizing biomass from other included up to 20% of the feed without any adverse effect
biological processes, most notably corn ethanol processes. on salmon growth or the final composition [35], and in the
Several S. cerevisiae SCP products are on the market today second, the algal meal could be included at 10% without
including LysCell1 by ICC Brazil, Aventine YeastTM by affecting the performance [36]. For rainbow trout, a
Pacific Ethanol, NuPro1 by Alltech, and ProPlex1 DY Spirulina algal meal could be incorporated at 10% of
by ADM, though most are targeted for high-value appli- the diet without an effect on performance [37]. In another
cations in terrestrial livestock. Recently, an enhanced trout study, a biomass of Scenedesmus almeriensis could
Dried Distillers’ Grain (DDG) product, marketed as replace up to 40% of fishmeal in the diet, though growth
NexPro1 by Flint Hills Resources, has been generated was on the lower end of acceptable performance [38]. A
using Fluid Quip Technologies’ Maximized Stillage Co- trial by Gamboa-Delgado et al. on shrimp, testing differ-
Products (MSCTM) technology. MSCTM mechanically ent ratios of Spirulina (Arthrospira platensis), Nannochlor-
separates a protein fraction from the solubles (i.e. partially opsis ocultata, and fishmeal, showed that Nannochloropsis
concentrated thin-stillage) from dry-grind ethanol opera- ocultata was a poor fishmeal replacement ingredient [39].
tions, which is effectively enriched for the ethanol yeast
cell mass. Marketing literature by Flint Hills Resources Nutrient accessibility (i.e. digestibility) for algal meals
shows NexPro1 can be used on several aquaculture can be an issue because of the rigidity of the cell wall [40
species such as tilapia, Pacific white shrimp, and rainbow ]. To improve the digestibility of these meals [41], the cell
trout. Similar to these products, ProPlex1 T is a bacterial wall can be disrupted by a variety of methods [40,42]:
SCP by-product of ADM’s threonine fermentation pro- enzymatic (such as cellulases), chemical (such as organic
cess. Recently, a dedicated sugar to SCP process was solvents or acids), and physical and mechanical (such as
announced by White Dog Labs (New Castle, DE) to bead milling, high-pressure homogenization or microflui-
produce a SCP product called ProTytonTM [32]. This dics). Physical and mechanical methods are generally
process largely uses the dry-grind ethanol process to preferred [42,43], as enzymatic and chemical methods
produce a SCP product along with a co-product called can impact intracellular nutrients. In a recent study, a
MiruTytonTM. microfluidizer was used on a Chlorella vulgaris meal and
then fed to salmon [40]. The whole-cell meal and the
Mixotrophs cell-ruptured meal had the same nutrient and protein
Many of the autotrophic modalities can also be operated quality, but the cell-ruptured meal had improved digest-
in a mixotrophic mode where both autotrophic and het- ibility over the whole-cell meal for EAAs, fats, and
erotrophic modalities are utilized by the same microbe in carbohydrates. Interestingly, starch digestibility was
the same process. This is most common for microalgae, actually higher than the control diet.
where in addition to CO2 and light, sugars can also be
added to further boost growth and biomass production Yeast and other fungi
rates and yields. For example, the cell mass yields for Salmon and shrimp have been the major focus of recent
Spirulina and Chlorella sp. in a mixotrophic production yeast feeding trials. For salmon, several different yeast
mode are higher than in pure photoautotroph mode [33]. meals have been tested: S. cerevisiae, Candida utilis, and
Mixotrophy can also be applied to chemoautotrophs [34], K. marxianus [8,44]. S. cerevisiae was found to be a poor
though this has been mainly in the context to improve protein meal, while C. utilis and K. marxianus could
metabolite yields rather than cell. replace up to 40% of the fishmeal in diets without
effecting growth performance or nutrient retention [8].
SCP feeding trial results In a follow-up study, the researchers investigated whether
Extensive feeding trials are necessary to validate new C. utilis could overcome soybean meal induced enteritis, a
products, and aquaculture consists of a wide variety of common side effect in carnivorous aquaculture species,
species and growth conditions. For this review, we but when fed a diet consisting of 40% soybean meal and
primarily focus on species of greater commercial and up to 20% C. utilis meal (replacing wheat gluten and
nutritional knowledge — whiteleg shrimp (Litopenaeus starch), the fish still displayed signs of enteritis [44].
vannamei), Atlantic salmon (Salmo salar), and rainbow For shrimp, several S. cerevisiae products were successful
trout (Oncorhynchus mykiss). In most trials, the goal was in replacing fishmeal (from 15 to 24%, depending on the
to evaluate growth and feed conversion when fishmeal is product) or soybean meal (up to 24%) in shrimp diets with
replaced by the SCP product, but trials also investigate no effect on growth performance [45–47]. NexPro1
broader nutritional effects. product was also successful in replacing up to 20% of
corn protein concentrate [46]. Finally, shrimp fed a diet of
Microalgae about 50% C. utilis had no adverse side effects, and
In regards to commercial interests, Cellana tested both a actually displayed higher growth rates compared to a
defatted Desmodesmus sp. SCP product and an algal meal complete fishmeal diet [48]. So far, these studies indicate

Current Opinion in Biotechnology 2020, 61:189–197 www.sciencedirect.com


Single cell protein advances for aquaculture use Jones et al. 195

C. utilis is a better SCP source than S. cerevisiae for salmon the health of the oceans, and often terrestrial plant meals
and shrimp diets. Another fungi tested as SCP source (as lack the EAAs required by many aquaculture species and
well as unsaturated fatty acids, beta-glucan, and mannane can contain antinutritional compounds, like phytic acid.
polymers) is Yarrowia lipolytica. The strain was tested on SCP-based protein meals have the potential to provide
shrimp [49] and salmon [50] and found to support increase the industry a sustainable, renewable feed ingredient to
fish weight as the control. make up for the deficiencies of plant-based meals and
reduce the need for fishmeal in diets. Long held as a
Bacteria promising technology, SCP meals are actually now being
Several different methanotroph-based SCP products have commercially produced by a number of companies and,
been tested successfully on Atlantic salmon. In one study, even more promising, is the ever increasing positive
salmon fed a diet containing up to 36% bacterial protein feeding trial data on important aquaculture species,
meal (BPM) displayed a higher growth rate and feed including salmon, trout, and shrimp. These data clearly
efficiency ratio than the control diet, though nutrient show the positive effects of SCP inclusion in diets and
digestibility was reduced [51]. In another study, the point to SCP meals become true commodity products.
authors found that M. capsulatus SCP can make up to While there are still challenges in scale-up, SCP proces-
52% of the dietary protein in a salmon diet and 38% in a sing, and the economics of a commodity product, the
trout diet with no adverse growth effects [52]. Interest- progress made in the past several years, in regards to
ingly, the inclusion of M. capsulatus SCP in a diet with finding new strains, developing new processes, and suc-
soybean meal prevented the development of soybean cessful testing on fish species, is highly encouraging for
meal-induced enteritis in salmon, suggesting further ben- SCP products.
efits of SCP products [53]. Finally, KnipBio Meal (Methy-
lobacterium extorquens) could replace 55% of fishmeal in Conflict of interest statement
salmon diets with no adverse side effects upon growth All authors are full-time employees of White Dog Labs,
[54] and could replace up to 10% of soybean meal in Inc., which is a biotechnology-based company that is
trout diets [55]. Shrimp have also been a key target for actively commercializing fermentation solutions for the
bacterial SCP. Inclusion of a novel mixture of two purple production of animal health and nutrition products.
non-sulfur bacteria at 1% of a diet gave modest growth
improvements over the control [56], a Corynebacterium CRediT authorship contribution statement
ammoniagenes SCP could replace 10–20 % [57], and Knip- Shawn W Jones: Conceptualization, Data curation, Writ-
Bio Meal was found to be able to completely replace ing - original draft, Writing - review & editing, Supervi-
fishmeal in shrimp diets [54]. A biofloc meal, prepared sion. Alon Karpol: Conceptualization, Data curation,
from biofloc grown on shrimp farm tanks, could replace up Writing - original draft, Writing - review & editing,
to 30% of fishmeal in diets [58]. A microbial biomass Supervision. Sivan Friedman: Conceptualization, Data
mixture of bacteria and microalgae (marketed at curation, Writing - original draft. Biniam T Maru:
NovacqTM, CSIRO Canberra, Australia) has been exten- Conceptualization, Data curation, Writing - original draft.
sively tested on black tiger shrimp (Penaeus monodon). Bryan P Tracy: Conceptualization, Methodology, Data
One study suggests it can overcome the growth disad- curation, Writing - original draft, Project administration,
vantages when fishmeal and fish oil are removed from the Funding acquisition.
prawns’ diet [59], and another shows improved growth
rates when Novacq is included at 10% of the diet [60]. Acknowledgements
This research did not receive any specific grant from funding agencies in
These studies are highly encouraging of SCP’s role in the the public, commercial, or non-for-profit sectors.
growing aquaculture industry. Not only do they offer
another high-quality protein ingredient applicable across References and recommended reading
Papers of particular interest, published within the period of review,
a wide range of species, but several studies suggest have been highlighted as:
further health benefits to the fish and shellfish.
 of special interest
 of outstanding interest
Conclusions
The demand for animal protein continues to increase 1. Ritchie H, Roser M: Meat and Seafood Production and
along with the world’s population, and aquaculture is Consumption. 2019.
poised to play an ever-larger role in fulfilling this need. 2. Tibbetts SM: The potential for’ Next-Generation’, microalgae-
 based feed ingredients for salmonid aquaculture in context of
A key challenge for the industry though is sourcing a the blue revolution. In Microalgal Biotechnology. Edited by
sustainable, renewable high-protein ingredient. Cur- Jacob-Lopes E, Zepka LQ, Queiroz MI. IntechOpen; 2018:151-175
rently, fishmeal, along with terrestrial plant meals, makes Comprehensive review of use of microalgae feed ingredients from the
perspective of an aquaculture nutritionist. It also takes into deeper
up most of the protein content of diets. The production of consideration the industry interests and some of the industry constraints.
fishmeal cannot scale with the growth of the aquaculture 3. Tocher DR, Betancor MB, Sprague M, Olsen RE, Napier JA:
industry without having profound and lasting impacts on Omega-3 long-chain polyunsaturated fatty acids, EPA and

www.sciencedirect.com Current Opinion in Biotechnology 2020, 61:189–197


196 Food biotechnology

DHA: bridging the gap between supply and demand. Nutrients 19. Johnson EA: Biotechnology of non-Saccharomyces yeasts–the
2019, 11. ascomycetes. Appl Microbiol Biotechnol 2013, 97:503-517.

4. Shah MR, Lutzu GA, Alam A, Sarker P, Chowdhury MAK, 20. Feinberg L, Marx CJ: Methylotrophs for aquaculture and animal
Parsaeimehr A, Liang Y, Daroch M: Microalgae in aquafeeds for feed. 2014.
a sustainable aquaculture industry. J Appl Phycol 2018, 30:
197-213. 21. Feinberg L, Marx CJ, Wall MA, Smith DR, Pujol-Baxley C, McAvoy
BD; 2016.
5. Xu W, Gao Z, Qi Z, Qiu M, Peng J, Shao R: Effect of dietary
Chlorella on the growth performance and physiological 22. Hulsen T, Hsieh K, Lu Y, Tait S, Batstone DJ: Simultaneous
parameters of Gibel carp, Carassius auratus gibelio. Tuk J Fish treatment and single cell protein production from agri-
Aquat Sci 2014, 14:53-57. industrial wastewaters using purple phototrophic bacteria or
microalgae - a comparison. Bioresour Technol 2018, 254:214-
6. Hu J, Nagarajan D, Zhang Q, Chang JS, Lee DJ: Heterotrophic 223.
cultivation of microalgae for pigment production: a review.
Biotechnol Adv 2018, 36:54-67. 23. Kornochalert N, Kantachote D, Chaiprapat S, Techkarnjanaruk S:
Use of Rhodopseudomonas palustris P1 stimulated growth by
7. Watanabe K, Arafiles KHV, Higashi R, Okamura Y, Tajima T, fermented pineapple extract to treat latex rubber sheet
Matsumura Y, Nakashimada Y, Matsuyama K, Aki T: Isolation of wastewater to obtain single cell protein. Ann Microbiol 2014,
high carotenoid-producing Aurantiochytrium sp. mutants and 64:1021-1032.
improvement of astaxanthin productivity using metabolic
information. J Oleo Sci 2018, 67:571-578. 24. Lee JZ, Logan A, Terry S, Spear JR: Microbial response to
single-cell protein production and brewery wastewater
8. Overland M, Karlsson A, Mydland LT, Romarheim OH, Skrede A: treatment. Microb Biotechnol 2015, 8:65-76.
Evaluation of Candida utilis, Kluyveromyces marxianus and
Saccharomyces cerevisiae yeasts as protein sources in diets 25. Liu B, Li Y, Song J, Zhang L, Dong J, Yang Q: Production of
for Atlantic salmon (Salmo salar). Aquaculture 2013, 402-403:1- single-cell protein with two-step fermentation for treatment of
7. potato starch processing waste. Cellulose 2014, 21:3637-3645.

9. Chen XQ, Zhao W, Xie SW, Xie JJ, Zhang ZH, Tian LX, Liu YJ, Niu J: 26. Mahan KM, Le RK, Wells T Jr, Anderson S, Yuan JS, Stoklosa RJ,
Effects of dietary hydrolyzed yeast (Rhodotorula Bhalla A, Hodge DB, Ragauskas AJ: Production of single cell
mucilaginosa) on growth performance, immune response, protein from agro-waste using Rhodococcus opacus. J Ind
antioxidant capacity and histomorphology of juvenile Nile Microbiol Biotechnol 2018, 45:795-801.
tilapia (Oreochromis niloticus). Fish Shellfish Immunol 2019,
90:30-39. 27. Packard H, Taylor ZW, Williams SL, Guimaraes PI, Toth J,
 Jensen RV, Senger RS, Kuhn DD, Stevens ?am?: Identification of
10. Ritala A, Hakkinen ST, Toivari M, Wiebe MG: Single cell protein- soil bacteria capable of utilizing a corn ethanol fermentation
 state-of-the-art, industrial landscape and patents 2001-2016. byproduct. PLoS One 2019, 14:e0212685
Front Microbiol 2017, 8:2009 This study explores isolating and cultivating non-canonical microorgan-
Good review of the commercial and industrial landscape of single-cell isms to produce single-cell protein and related products from dry-grind
protein technologies through 2017, which also includes a good survey of ethanol thin stillage concentrated solubles. This study demonstrates the
the patenting activity. potential to further valorize some of the world’s largest, point source
feedstocks, which will continue to be an emerging opportunity for the
11. Nasseri AT, Rasoul-Amini S, Morowvat MH, Ghasemi Y: Single global ethanol industry.
cell protein: production and process. Am J Food Technol 2011,
6:103-116. 28. Saejung C, Thammaratana T: Biomass recovery during
municipal wastewater treatment using photosynthetic
12. Suman G, Nupur M, Anuradha S, Pradeep B: Singel cell protein bacteria and prospect of production of single cell protein for
production: a review. Int J Curr Microbiol Appl Sci 2015, 4: feedstuff. Environ Technol 2016, 37:3055-3061.
251-262.
29. Spalvins K, Ivanovs K, Blumberga D: Single cell protein
13. Leyland B, Leu S, Boussiba S: Are Thraustochytrids algae? production from waste biomass: review of various agricultural
Fungal Biol 2017, 121:835-840. by-products. Agron Res 2018, 16:1493-1508.

14. Ye C, Qiao W, Yu X, Ji X, Huang H, Collier JL, Liu L: 30. Taran W, Asadi N: A novel approach for environmentally
Reconstruction and analysis of the genome-scale metabolic friendly production of single cell protein from petrochemical
model of Schizochytrium limacinum SR21 for wastewater using a halophilic microorganism in different
docosahexaenoic acid production. BMC Genomics 2015, conditions. Petrol Sci Technol 2014, 32:625-630.
16:799.
31. Wongputtisin P, Khanongnuch C, Kongbuntad W, Niamsup P,
15. Ganuza E, Yang S, Amezquita M, Giraldo-Silva A, Andersen RA: Lumyong S, Sarkar PK: Use of Bacillus subtilis isolates from
Genomics, biology and phylogeny Aurantiochytrium Tua-nao towards nutritional improvement of soya bean hull for
acetophilum sp. nov. (Thraustrochytriaceae), including first monogastric feed application. Lett Appl Microbiol 2014, 59:
evidence of sexual reproduction. Protist 2019, 170:209-232. 328-333.

16. Yen H-W, Hu I-C, Chen C-Y, Nagarajan D, Chang J-S: Design of 32. Karpol A, Jones SW, Tracy BP: Single-cell proteins as
 photobioreactors for algal cultivation. Biofuels for Algae. edn aquaculture feed. CEP Magazine. AIChE; 2019.
2nd. 2019:225-256
Comprehensive review of design considerations, technology advance- 33. Barka A, Blecker C: Microalgae as a potential source of single-
ments and technology needs for improving photobioreactor designs to cell proteins. A review. Biotechnol Agron Soc Environ 2016.
cost effectively control the growth of algae.
34. Jones SW, Fast AG, Carlson ED, Wiedel CA, Au J,
17. Garimella S, Kudle KR, Kasoju A, Merugu R: Current status on Antoniewicz MR, Papoutsakis ET, Tracy BP: CO2 fixation by
single cell protein (SCP) production from photosynthetic anaerobic non-photosynthetic mixotrophy for improved
purple non sulphur bacteria. J Chem Pharm Sci 2017, 10: carbon conversion. Nat Commun 2016, 7:12800.
915-922.
35. Kiron V, Sorensen M, Huntley M, Vasanth GK, Gong Y, Dahle D,
18. Senior PJ, Windass J: The ICI single cell protein process. Palihawadana ?am?: Defatted biomass of the microalgae,
 Biotechnol Lett 1980, 2:205-210 Desmodesmus sp., can replace fishmeal in the feeds for
This is an old paper, but a candid and rare sharing of industrial perspec- Atlantic salmon. Front Mar Sci 2016, 3:67.
tive and decision making for single-cell protein production. It discusses 36. Kiron V, Phromkunthong W, Huntley M, Archibald I, De
technical challenges of methane and oxygen fermentation, which led to Scheemaker G: Marine microalgae from biorefinery as a
the pivot decision towards methanol fermentation, which was fully potential feed protein source for Atlantic salmon, common
commercialized. carp and whiteleg shrimp. Aquac Nutr 2012, 18:521-531.

Current Opinion in Biotechnology 2020, 61:189–197 www.sciencedirect.com


Single cell protein advances for aquaculture use Jones et al. 197

37. Sirakov I, Velichkova KN, Nikolov G: The effect of algae meal 53. Romarheim OH, Overland M, Mydland LT, Skrede A, Landsverk T:
(Spirulina) on the growth performance and carcass Bacteria grown on natural gas prevent soybean meal-induced
parameters of rainbow trout (Oncorhychus myiss). J BioSci enteritis in Atlantic salmon. J Nutr 2011, 141:124-130.
Biotech 2012:151-156.
54. Tlusty M, Rhyne A, Szczebak JT, Bourque B, Bowen JL, Burr G,
38. Tomas-Almenar C, Larran ?am?, de Mercado E, Sanz-Calvo MA,  Marx CJ, Feinberg L: A transdisciplinary approach to the initial
Hernandez D, Riano B, Garcia-Gonzalez MC: Scenedesmus validation of a single cell protein as an alternative protein
almerisnsis from an integrated system waste-nutrient, as source for use in aquafeeds. PeerJ 2017, 5 e3170
sustainable protein source for feed to rainbow trout This paper is a portion of the dossier submitted to the FDA for the first (to
(Oncorhynchus mykiss). Aquaculture 2018, 497:422-430. our knowledge) genetically engineered SCP product to obtain GRAS
(generally regarded as safe) recognition by the US Food and Drug
39. Gamboa-Delgado J, Navarro YIM, Nieto-Lopez MG, Villarreal- Administration. This sets a significant precedent for the advancement
Cavazos DA, Cruz-Suarez LE: Assimilation of dietary nitrogen of additional, genetically engineered feed ingredients for aquaculture.
supplied by fish meal and microalgal biomass from Spirulina
(Arthrospira platensis) and Nannochloropsis oculata in shrimp 55. Hardy RW, Patro B, Pujol-Baxley C, Marx CJ, Feinberg L: Partial
Litopenaeus vannamei fed compound diets. J Appl Phycol replacement of soybean meal with Methylobacterium
2019, 31:2379-2389. extorquens single-cell protein in feeds for rainbow trout
(Oncorhynchus myiss Walbaum). Aquac Res 2018, 49:2218-2224.
40. Tibbetts SM, Mann J, Dumas A: Apparent digestibility of
 nutrients, energy, essential amino acids and fatty acids of 56. Chumpol S, Kantachote D, Nitoda T, Kanzaki H: Administration of
juvenile Atlantic salmon (Salmo salar L.) diets containing purple nonsulfur bacteria as single cell protein by mixing with
whole-cell or cell-ruptured Chlorella vulgaris meals at five shrimp feed to enhance growth, immune response and
dietary inclusion levels. Aquaculture 2017, 481:25-39 survival in white shrimp (Litopenaus vannamei) cultivation.
A good example of considering additional post-processing requirements Aquaculture 2018, 489.
to optimize nutrient availability of single-cell protein biomass for feed
applications. 57. Hamidoghli A, Yun H, Won S, Kim S, Farris NW, Bai SC: Evaluation of
a single-cell protein as a dietary fish meal substitute for whiteleg
41. Teuling E, Wierenga PA, Agboola JO, Gruppen H, Schrama JW:
shrimp Litopenaeus vannamei. Fish Sci 2019, 85:147-155.
Cell wall disruption increases bioavailability of
Nannochloropsis gaditana nutrients for juvenile Nile tilapia 58. Dantas EM Jr, Valle BCS, Brito CMS, Calazans NKF, Peixoto SRM,
(Oreochromis niloticus). Aquaculture 2019, 499:269-282. Soares RB: Partial replacement of fishmeal with biofloc meal in
42. Lee AK, Lewis DM, Ashman PJ: Disruption of microalgal cells for the diet of postlarvae of the Pacific white shrimp Litopenaeus
the extraction of lipids for biofuels: processes and specific vannamei. Aquac Nutr 2016, 22:335-342.
energy requirements. Biomass Bioenergy 2012, 46:89-101.
59. Glencross B, Irvin S, Arnold S, Blyth D, Bourne N, Preston N:
43. Safi C, Charton M, Ursu AV, Laroche C, Zebib B, Pontalier PY, Vaca- Effective use of microbial biomass products to facilitate the
Garcia C: Release of hydro-soluble microalgal proteins using complete replacement of fishery resources in diets for the
mechanical and chemical treatments. Algal Res 2014, 3:55-60. black tiger shrimp, Penaeus monodon. Aquaculture 2014,
431:12-19.
44. Hansen JO, Hofossaeter M, Sahlmann C, Anestad R, Reveco-
Urzua FE, Press CM, Mydland LT, Overland M: Effect of Candida 60. Arnold S, Smullen R, Briggs M, West M, Glencross B: The
utilis on growth and intestinal health of Atlantic salmon (Salmo combined effect of feed frequency and ration size of diets with
salar) parr. Aquaculture 2019, 511:734239. and without microbial biomass on the growth and feed
conversion of juvenile Penaeus monodon. Aquac Nutr 2016,
45. Guo J, Qiu X, Salze G, Davis DA: Use of high-protein brewer’s 22:1340-1347.
yeast products in practical diets for the Pacific white shrimp
Litopenaeus vannamei. Aquac Nutr 2019, 25:680-690. 61. Yu J: Fixation of carbon dioxide by a hydrogen-oxidizing
bacterium for value-added products. World J Microbiol
46. Guo J, ReisJ, Salze G,RhodesM, Tilton S,DavisDA:Using high protein Biotechnol 2018, 34:89.
distiller’s dried grain product to replace corn protein concentrate
and fishmeal in practical diets for the Pacific white shrimp 62. Fishmeal and fish oil facts and figures. Seafish. 2016.
Litopenaeus vannamei. J World Aquac Soc 2019, 50:983-992.
63. Moran CA, Morlacchini M, Keegan JD, Fusconi G: The effect of
47. Jin M, Xiong J, Zhou QC, Yuan Y, Wang XX, Sun P: Dietary yeast dietary supplementation with Aurantiochytrium limacinum on
hydrolysate and brewer’s yeast supplementation could lactating dairy cows in terms of animal health, productivity and
enhance growth performance, innate immunity capacity and milk composition. J Anim Physiol Anim Nutr 2018, 102:576-590.
ammonia nitrogen stress resistance ability of Pacific white
shrimp (Litopenaeus vannamei). Fish Shellfish Immunol 2018, 64. Sucu E, Udum D, Gunes N, Canbolat O, Filya I: Influence of
82:121-129. supplementing diet with microalgae (Schizochytrium
limacinum) on growth and metabolism in lambs during the
48. Gamboa-Delgado J, Fernandez-Diaz B, Nieto-Lopez MG, Cruz- summer. Tuk J Vet Anim Sci 2017, 41:167-174.
Suarez LE: Nutritional contribution of torula yeast and fish
meal to the growth of shrimp Litopenaeus vannamei as 65. Rasouli Z, Valverde-Perez B, D’Este M, De Francisci D,
indicated by natural nitrogen stable isotopes. Aquaculture Angelidaki I: Nutrient recovery from industrial wastewater as
2015, 453:116-121. single cell protein by a co-culture of green microalgae and
methanotrophs. Biochem Eng J 2018, 134:129-135.
49. Alvarez-Sanchez AR, Nolasco H, Pena A, Mejia H: In vitro
digestibility of Yarrowia lipolytica yeast and growth 66. Khoshnevisan B, Tsapekos P, Zhang Y, Valverde-Perez B,
performance in whiteleg shrimp Litopenaeus vannamei. J Fish Angelidaki I: Urban biowaste valorization by coupling
Aquat Sci 2018, 18. anaerobic digestion and single cell protein production.
50. Hatlen B, Berge GM, Odom JM, Mundheim H, Ruyter B: Growth Bioresour Technol 2019, 290:121743.
performance, feed utilisation and fatty acid deposition in
67. Yan J, Han B, Gui X, Wang G, Xu L, Yan Y, Madzak C, Pan D,
Atlantic salmon, Salmo salar L., fed graded levels of high-lipid/
Wang Y, Zha G et al.: Engineering Yarrowia lipolytica to
high-EPA Yarrowia lipolytica biomass. Aquaculture 2012, 364-
simultaneously produce lipase and single cell protein from
365:39-47.
agro-industrial wastes for feed. Sci Rep 2018, 8:758.
51. Aas TS, Grisdale-Helland B, Terjesen BF, Helland SJ: Improved
growth and nutrient utilisation in Atlantic salmon (Salmo salar) 68. Molitor B, Mishra A, Angenent LT: Power-to-protein: converting
fed diets containing a bacterial protein meal. Aquaculture 2006,  renewable electric power and carbon dioxide into single cell
259:365-376. protein with a two-stage bioprocess. Energy Environ Sci 2019,
12:3515-3521
52. Overland M, Tauson A-H, Shearer K, Skrede A: Evaluation of A good example of a multifermentation approach with well conducted
methane-utlising bacteria products as feed ingredients for research to combine multiple modalities of fermentation for the produc-
monogastric animals. Arch Anim Nutr 2010, 64:171-189. tion of single-cell protein.

www.sciencedirect.com Current Opinion in Biotechnology 2020, 61:189–197

You might also like