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To cite this article: Corina Cheptea, Valeriu Sunel, Shardi Manahedji Ardeshir, Ana Cezarina
Morosanu & Dana Ortansa Dorohoi (2020) Some physico-chemical characteristics of amino-acid
derivatives containing rest of 1,2,4-triazole-3,4-di-substituted with potential antitumoral activity,
Molecular Crystals and Liquid Crystals, 697:1, 97-107, DOI: 10.1080/15421406.2020.1731081
ABSTRACT KEYWORDS
Dipeptide derivatives from p-aminobenzoyl-phenylglycine and p-ami- antimetabolites; dipeptides;
nobenzoyl-phenylalanine were grafted on 1,2,4-triazole heterocycle in 1,2,4-triazole heterocycle;
order to get new substances with potential biological activity. The NMR and FTIR
Spectroscopy;
compounds synthetized and characterized in this paper have a struc- p-aminobenzoyl-phenylalan-
ture that fits in the antimetabolites category, products used to treat ine; p-aminobenzoyl-
malignant tumors. The presence of several bioactive groups in the phenylglycine; Spartan
same molecule permits us to study the chemical structure - biological 14 software
activity correlation based on computational analyses using SPARTAN’14
software. Some correlations between the molecular parameters estab-
lished with Spartan’14 software are evidenced in this paper.
1. Introduction
The current trend in chemotherapy of malignant tumors is characterized by predomin-
antly use of the antimetabolites. A series of researchers have synthesized a number of
a-amino acid derivatives, some of them having a cytostatic activity, exerted by the
antagonist effect of the aminic acid or dipeptide, respectively [1–8]. In the structure of
the new substances they have synthesized are present, among other atomic groups, the
1,2,4-triazole heterocycle, the indazole ring and the peptide fragment. The triazole deriv-
atives are important through their antifungal [9–11], antimicrobial [12,13], anti-inflam-
matory [14,15], hypnotic and sedative [16], analgesic [17,18], cardioprotective [19],
antitumoral [13] actions. Indazole and its derivatives are found in the composition of
many drugs with extremely different pharmacological properties: antihistamine [20],
antiviral [21], antimicrobial [22,23], cytostatic [24–26], anti-inflammatory [27], anal-
gesic-antipyretic [28], anti-HIV [29], antiarrhythmic [30], antifungal [31], or gluco-
corticoid receptor antagonists [32]. Peptide fragment has a well-defined role in the
human body and has interesting biological properties [2,7,33–36]. Phenyl glycine as well
as phenylalanine and their acylated derivatives with the substituted benzoyl fragment in
para-position, taking part in the metabolism of living organisms, reduces the toxicity of
some medicinal products, also facilitating their access to the cellular level [2,8,14,37–43].
CONTACT Ortansa Dorohoi ddorohoi@uaic.ro Faculty of Phisics, Al. I. Cuza University of Iasi, Iasi, Romania
ß 2020 Taylor & Francis Group, LLC
98 C. CHEPTEA ET AL.
amine and of the ester. The amine group involved in the syntheses, presented in the
paper, has a lower basicity, hence a lower reactivity, given its role as a nucleophilic
agent. The low reactivity of the amine group is compensated by the high reactivity of
the thioacetic ester.
The final compounds (IV-IX) studied in this paper 3-[(5’-nitro-1H-indazole-1’-yl)-
methyl] 4-aryl-1,2,4-triazole-5-(a-thioacetyl) peptides were obtained by the following
general procedure: in a suspension of 0.01 ml ester (I-III) in 100 ml anhydrous dioxane
0.02 mole p-aminobenzoyl-phenylglycine, respectively p-aminobenzoyl-phenylalanine,
100 C. CHEPTEA ET AL.
were added and the mixtures was heated at 85–90 C for 5 h. After cooling, from the
reaction mixture in water a precipitate was obtained, which, after purification, by
repeated recrystallizations from acetone and anhydrous ethanol, became white crystals.
The obtained compounds are denominated as it follows:
3-[(5’-nitro-1H-indazole-1’-yl)-methyl]-4-phenyl-1,2,4-triazole-5-[(a-thioacetyl)
-aminobenzoyl]-D,L-phenylglycine (IV);
3-[(5’-nitro-1H-indazole-1’-yl)-methyl]-4-(p-tolyl)-1,2,4-triazole-5-[(a-thioacetyl)
-aminobenzoyl]-D,L-phenylglycine (V);
3-[(5’-nitro-1H-indazole-1’-yl)-methyl]-4-(p-methoxyphenyl)-1,2,4-triazole-5-
[(a-thioacetyl)-aminobenzoyl]-D,L-phenylglycine (VI);
3-[(5’-nitro-1H-indazole-1’-yl)-methyl]-4-phenyl-1,2,4-triazole-5-[(a-thioacetyl)-
aminobenzoyl]-L-phenylalanine (VII);
3-[(5’-nitro-1H-indazole-1’-yl)-methyl]-4-(p-tolyl)-1,2,4-triazole-5-[(a-thioacetyl)-
aminobenzoyl]-L-phenylalanine (VIII);
3-[(5’-nitro-1H-indazole-1’-yl)-methyl]-4-(p-methoxyphenyl)-1,2,4-triazole-5-
[(a-thioacetyl)-aminobenzoyl]-L-phenylalanine (IX).
Table 3. Signals (ppm) and their attribution in 1H NMR spectra of compounds IV-IX.
1
Compound H NMR signals in deuterated DMSO
IV 5.39 (s, 2H, CH2); 5.56-5.57 (d, 1H, CH); 5.76 (s, 2H, CH2); 6.08-6.09 (d, 2H, CHAr); 6.91-6.93 (d, 2H,
CHAr); 7.43-7.44 (m, 3H, CHAr); 7.45-7.46 (d, 2H, CHAr); 7.46-7.48 (d, 1H, CHAr); 7.81-7.83 (d, 2H,
CHAr); 7.99 (s, 1H, CHAr); 8.05 (s, 1H, NH); 8.29-8.31 (d, 1H, NH); 8.50 (s, 1H, CHAr); 8.86 8.87 (d,
1H, CHAr); 9.02 (s, 1H, CHAr); 12.66-12.68 (d,1H, COOH)
V 2.43 (s, 3H, CH3); 5.50-5.53 (d, 1H, CH); 5.69 (s, 2H, CH2); 5.69 (s, 2H, CH2); 5.83 (s, 2H, CH2); 6.57-6.59
(d, 2H, CHAr); 7.16-7.18 (d, 2H, CHAr); 7.25-7.27 (m, 3H, CHAr); 7.34-7.37 (d, 2H, CHAr); 7.40-7.42
(t, 1H, CHAr); 7.51-7.53 (m, 2H, CHAr); 7.70-7.73 (d, 2H, CHAr); 7.98 (s, 1H, NH); 8.38-8.41 (d, 1H,
NH); 8.49 (s,1H, CHAr); 8.61-8.63 (d, 1H, CHAr); 8.88 (s, 1H, CHAr); 12.72-12.74 (d, 1H, COOH)
VI 3.90 (s, 3H, OCH3); 5.45-5.47 (d, 1H, CH); 5.62 (s, 2H, CH2); 5.77 (s, 2H, CH2); 6.89 6.92 (d, 2H,
CHAr); 7.21-7.23 (d, 2H, CHAr); 7.29-7.32 (m, 3H, CHAr); 7.39-7.41 (d, 2H, CHAr); 7.44-7.46 (t, 1H,
CHAr); 7.56-7.58 (m, 2H, CHAr); 7.71-7.73 (d, 2H, CHAr); 7.80 (s, 1H, NH); 8.20-8.23 (d, 1H, NH);
8.69 (s, 1H, CHAr); 8.74-8.76 (d, 1H, CHAr); 8.80 (s, 1H, CHAr); 12.69-12.74 (d, 1H, COOH)
VII 2.90-3.20 (m, 2H, CH2); 4.50-4.60 (m, 1H, CH); 5.63 (s, 2H, CH2); 5.97 (s, 2H, CH2); 6.50-6.52 (d, 2H,
CHAr); 7.15-7.18 (t, 1H, CH2); 7.23-7.25 (m, 4H, CHAr); 7.52-7.54 (d, 2H, CHAr); 7.70 (t, 1H, CHAr);
7.86-7.88 (d, 2H, CHAr); 7.90-7.92 (d, 2H, CHAr); 8.15-8.17 (d, 1H, NH); 8.26 (s, 1H, CHAr); 8.39-8.42
(d, 1H, CHAr); 8.56-8.58 (d, 1H, CHAr); 8.70-8.74 (d, 1H, NH); 8.89 (s, 1H, CHAr ); 12.50-12.90 (d,
1H, COOH)
VII 2.11 (s, 3H, CH3); 3.10-3.30 (m, 2H, CH2); 4.99-5.06 (m, 1H, CH); 5.30 (s, 2H, CH2); 5.65 (s, 2H, CH2);
6.30-6.60 (d, 2H, CHAr); 7.06-7.09 (t, 1H, CH2); 7.19-7.22 (m, 4H, CHAr); 7.40-7.46 (d, 2H, CHAr);
7.64 (t,1H, CHAr); 7.72-7.79 (d, 2H, CHAr); 7.92-7.99 (d, 2H, CHAr); 8.23-8.25 (d, 1H, NH); 8.39 (s,1H,
CHAr); 8.60-8.65 (d,1H, CHAr); 8.69-8.72 (d,1H, NH)); 8.93 (s,1H, CHAr ); 12.21-12.40 (d,1H, COOH)
IX 2.87-2.92 (m, 2H, CH2); 3.94 (s, 3H, OCH3); 4.68-4.71 (m, 1H, CH); 5.51 (s, 2H, CH2); 5.80 (s, 2H, CH2);
6.36-6.44 (d, 2H, CHAr); 7.26-7.28 (t, 1H, CH2); 7.49-7.52 (d, 2H, CHAr); 7.79 (t, 1H, CHAr); 7.89-7.93
(d, 2H, CHAr); 8.19-8.22 (d, 1H, NH); 8.39 (s,1H, CHAr); 8.48-8.51 (d, 1H, CHAr); 8.82-8.87 (d, 1H,
NH); 8.95 (s, 1H, CHAr ); 12.87-12.95 (d, 1H, COOH)
S-CH2 appears in all FTIR spectra at 746–791 cm1 and one intense band at
815–897 cm1 is characteristic to disubstituted benzene ring. A specific band attributed
to COOH appears in FTIR at 3242–3286 cm1 (see Table 2).
The signals in IH NMR spectra of the studied compounds IV–IX are listed in
Table 3. The signals at 2.87–3.30 ppm and 5.30–5.97 ppm are attributed to protons of
CH2 group and the signals at 4.5–5.57 corresponding to the proton of the group CH
appear in all IH NMR spectra. The aromatic protons give NMR signals at
6.30–7.28 ppm, 7.43–8.39 ppm and 8.48–9.12 ppm. The protons of methyl group appear
as a singlet at 2.11–2.43 ppm in 1HNMR spectra of compounds V and VIII. The signal
at 3.90–3.94 ppm can be attributed to the protons of OCH3 group from the compounds
102 C. CHEPTEA ET AL.
VI and IX. The singlet at 7.80–8.06 ppm and the doublet at 8.15–8.87 ppm identify the
NH amide groups. The proton of carbonyl group appears in the range 12.20–1205 ppm,
proving that the reaction of grafting the dipeptides on the triazole ring took place.
Some computed by Spartan 14 software molecular parameters are given in Table 4.
The formation energy listed in this table indicates the stability of the synthetized com-
pounds; the higher occupied molecular orbital (HOMO) and the lowest unoccupied
MOLECULAR CRYSTALS AND LIQUID CRYSTALS 103
orbital (LUMO) give by their difference the molecular reactivity, the polar surface area
(PSA) offers information about the ability of the molecules to penetrate the cells of
human body, and logP, defined as octanol/water partition coefficient, inform us of the
hydrophylicity/lipophylicity of the studied molecules.
104 C. CHEPTEA ET AL.
Figure 4. Molecular dipole moment vs. electric charge near the oxygen of NO2.
The studied compounds are dipolar (see Table 4); the compounds IV–VI are more
polar compared with the compounds VII–IX, having similar structures, but with a
group –CH2 introduced between NH group and the benzene ring. One can suppose
that the methylene group –CH2 interrupts the conjugation between p electron of –NH
group and p electrons of the aromatic nucleus.
From the Table 4 it also seen that the molecular polarizability in the first group of
molecules IV-VI is smaller that the molecular polarizability in the similar structures of
the second group VII-IX in which the atomic group –CH2 is introduced.
The negative values of LogP indicate the hydrophilic character of the majority of the
studied compounds. Only compound VIII has an lipophilic character because it has
positive computed value of LogP. Figures 1 and 2 show the electrostatic charges located
near the molecular atoms in the two studied compounds computed by Spartan 14 soft-
ware. The orientation of the electric dipole moment given by Spartan program is also
shown in these figures.
Based on the data listed in Table 4, one can establish some correlations between the
computed characteristics of the studied molecules. For example, in Figure 3 the
MOLECULAR CRYSTALS AND LIQUID CRYSTALS 105
Figure 5. Molecular dipole moment vs. electric charge near the nitrogen atom of the first NH group.
dependence between the molecular polarizability and the electric dipole moment is
shown. The linear dependences between the molecular polarizability and dipole moment
computed by Spartan have different slopes for the groups IV-VI and VII-IX, probably
due to CH2 group introduced in the molecules of the second compounds group.
The electrostatic charges localized near the atoms in the new synthetized compound
(some of them, computed by Spartan 14, are listed in Table 5) indicate the degree of
electron charge separation in a given molecule and the molecular sites of the high abil-
ity to participate in specific interactions. The electrostatic charges localized near the
oxygen atoms of NO2 group influence the molecular dipole as it results from Figure 4,
but the slopes of the linear dependences change their signs for VII-IX group compared
with compounds IV-VI. The same tendency can be observed also for the dependence of
molecular dipole moment and the electrostatic charge on the second oxygen atom of
the same atomic group. The electric charges near nitrogen in the two (NH) groups of
molecules influence the molecular dipole moment as it is shown in Table 5. This
dependence is illustrated in the Figure 5 for the first NH group in the molecules IV-IX.
The -CH2 group introduced in VII-IX compounds also influences the dipolar
moment and polarizability. It determines an increase in the molecular polarizability and
a decrease in dipole moment, compared with molecules having a similar structure from
IV-VI group.
4. Conclusions
The aim of this research was to made the synthesis and characterization of some pepti-
des based on 5-nitroindazole. A simple and efficient procedure was used in the reaction
of 3-[(5’-nitro-1H-indazole-1’-yl)-methyl] 4-phenyl-1,2,4-triazole-sulfur-acetic with p-
aminobenzoyl-DL-phenylglycine and p-aminobenzoyl-phenylalanine.
The reaction of esters’ condensation with the two amino acid derivatives, although
very simple, proved as being hardly controlled due to the reduced reactivity of the
amino group.
106 C. CHEPTEA ET AL.
The sulfur acetic esters reactivity and the purity of the amino acid derivatives have a
decisive influence on the synthesis efficiency in obtaining the final products, 3-[(5’-
nitro-1H-indazole-1’-yl)-methyl] 4-phenyl-1,2,4-triazole-5’-(a-tioacetyl)-peptides. The
synthesis of the new compounds was followed by structural investigations like elemental
chemical analysis, spectral (FT-IR and NMR) and computational investigations.
SPARTAN 14 was used to compute some parameters of the synthesized molecules and
some linear dependences between the computed parameters and molecular characteris-
tics were evidenced. It was found that the –CH2 group introduced in the three mole-
cules of the VII-IX compounds determines the change in the sign of the slopes of the
established dependences.
Funding
This work was supported by a grant of Ministry of National Education, Project Number CNFIS-
FDI-2019-0366.
ORCID
Dana Ortansa Dorohoi http://orcid.org/0000-0003-3708-9160
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MOLECULAR CRYSTALS AND LIQUID CRYSTALS 107