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Stress Induction of Mycotoxin Biosynsthesis Genes by Abiotic Factors
Stress Induction of Mycotoxin Biosynsthesis Genes by Abiotic Factors
c 2008 Federation of European Microbiological Societies FEMS Microbiol Lett 284 (2008) 142–149
Published by Blackwell Publishing Ltd. All rights reserved
Stress induction of mycotoxin biosynthesis genes 143
activation was also demonstrated for the fum1 gene of using a mortar and pestle in liquid nitrogen. About 250 mg of
Fusarium verticillioides (Jurado et al., 2008). the resulting powder was used for isolation of total
The objectives of this study were to determine the RNA. The powder was resuspended in 750 mL lysis buffer,
influence of abiotic factors, such as temperature, water mixed with 7.5 mL b-mercaptoethanol and 100 glass beads with
activity (aw) and pH, and temperature aw interactions on a diameter of 1 mm (B. Braun Biotech International GmbH,
mycotoxin biosynthesis gene expression, mycotoxin produc- Melsungen, Germany) in a 2-mL RNAse-free microreaction
tion and growth. This was done to evaluate whether a tube. The extracts were mixed thoroughly and incubated for
generic expression profile could be established, which could 15 min at 55 1C and 42 kHz in an S10H ultrasonic bath (Elma,
show the impact that environmental stress conditions have Singen, Germany). All further procedures were essentially the
on the triggering of mycotoxin biosynthesis gene induction same as suggested by the manufacturer of the kit.
in three important mycotoxigenic species (A. parasiticus,
P. verrucosum and F. culmorum). cDNA synthesis
For cDNA synthesis, 8 mL of the DNAse I-treated total RNA
Materials and methods was used along with the Omniscript Reverse Transcription
kit (Qiagen). The reaction mixture was essentially as de-
Strains and culture conditions scribed by the manufacturer and incubated at 37 1C for 1 h.
The cDNA was either directly used for real-time PCR or
The following strains from the culture collection of the Max
stored at 20 1C.
Rubner Institute have been used throughout the experi-
ments: A. parasiticus BFE096p as an aflatoxin producer,
Reverse transcriptase real-time PCR
F. culmorum BFE928 as a trichothecene producer and
P. verrucosum BFE808 as an OTA producer. The following The reverse transcriptase real-time PCR reactions to mea-
growth conditions were routinely used to support mycotox- sure the expression of the otapksPV gene in P. verrucosum
in biosynthesis – A. parasiticus BFE096p: incubation for 7 were performed essentially as described in Schmidt-Heydt
days at 30 1C on YES agar (20 g L 1 yeast extract, 150 g L 1 et al. (2007).
sucrose, 15 g L 1 agar); F. culmorum BFE928 and P. verruco-
sum BFE808: incubation for 7 days at 25 1C on YES agar. Microarray experiments
For labelling of cDNA, 10–50 mg of the DNAse I-treated total
Modifications of the growth media RNA was used according to the specifications of the manu-
The following modifications of the growth media and facturer of the Micromax cDNA Direct Labelling kit (Perkin
growth conditions were used to measure the effect of Elmer Life and Analytical Sciences Inc., Boston). After
environmental factors (aw, temperature and pH) on gene cDNA synthesis and labelling, the cDNA was purified with
expression and mycotoxin biosynthesis in the analysed a QiaQuick MinElute-Kit (Qiagen). The labelled and pur-
strains: the pH in the YES medium was adjusted by adding ified cDNA was brought to dryness in a Speed Vac concen-
HCl or sodium hydroxide up to the desired value. The aw in trator (Savant Instruments, Farmingdale), resuspended in
the YES medium was modified with the appropriate amount 60 mL hybridization buffer (Scienion, Berlin, Germany),
of glycerol [aw/glycerol (mL) per 100 mL YES medium: 0.99/ heated for 2 min at 95 1C and hybridized for 18 h at 42 1C
10.8, 0.98/13.1, 0.95/19.9, 0.93/24.5]. For incubation at to the microarray using an automatic hybridization station
different temperatures (15–30 1C), the inoculated plates (Perkin Elmer). Following hybridization the array was
were placed in temperature-controlled cabinets. scanned with a confocal laser scanner system (Scanarray lite,
Perkin Elmer) at a resolution of 5 mm. Analysis of the results
was performed using SCANARRAY software (Perkin Elmer).
Assessment of colony growth rate
The results were normalized using the Lowess algorithm
For measuring the radial mycelial growth rate, the diameter (locally weighted scatter plot smoothing) and subtraction of
of the colony was measured in two directions at right angles the background signal intensity. As control, the constitu-
to each other. The increase in colony radius was divided by tively expressed b-tubulin gene was used.
the time to obtain the relative growth rates.
Quantitative determination of OTA by HPLC
Isolation of RNA from samples
Detection and quantitative determination of OTA from
To perform microarray and real-time PCR experiments, fungal colonies was performed according to the method
RNA was isolated using the RNAeasy Plant Mini kit (Qiagen, described in the ISO 15141 standard (1998, www.iso.ch). For
Hilden, Germany). One gram of the mycelium was ground this, 100 mg of the fungal colony was extracted under shaking
10 10 10
PV × 1000
1
1 1
0.1
0.1 0.1
0.01
0 0 0
0.99 0.98 0.95 0.93 30 25 20 15 8 6 5 4
1
Ochratoxin A
1 1
0 0 0
0.99 0.98 0.95 0.93 30 25 20 15 8 6 5 4
Water activity Temperature pH
Fig. 1. Growth rate (a1, b1, c1), otapksPV gene expression level (a2, b2, c2) and OTA biosynthesis of Penicillium verrucosum (a3, b3, c3). To obtain
these data, P. verrucosum was grown on YES medium adjusted to the parameters given here. Only the indicated parameters were variable; all others
were kept constant. After 7 days of incubation, growth rate was determined by measuring colony diameter, otapksPV copy number was determined by
real-time PCR and OTA biosynthesis was measured by HPLC. All experiments were performed several times.
c 2008 Federation of European Microbiological Societies FEMS Microbiol Lett 284 (2008) 142–149
Published by Blackwell Publishing Ltd. All rights reserved
Stress induction of mycotoxin biosynthesis genes 145
analysed strain of P. verrucosum showed optimum growth the two parameters had a significant influence on relative
between 25 and 30 1C. There was a decrease in the growth expression of certain genes, as both parameters could either
rate until 15 1C. Highest growth was found at pH 6. activate or repress gene expression, when the other para-
Penicillium verrucosum showed a reduction in growth under meter was kept constant. However over a certain range
slightly alkaline conditions, e.g. at pH 8, and a more (20 1C) temperature seems to be the most important factor
significant inhibition under acidic conditions. in mycotoxin cluster gene regulation. With all three species,
The general expression profile of the otapksPV gene was gene expression appeared to be lowest at this temperature,
similar in relation to changes in these three abiotic parameters. irrespective of the applied water activity. For A. parasiticus a
In each case two expression peaks were observed, albeit at broad temperature range was tested (15–37 1C). No other
different intensities. The major peak of expression was within similar zone of lower expression could be observed. Gen-
the parameter range for optimal growth conditions. However, erally, in these experiments the actual production of the
this was never found at the same value at which optimal respective mycotoxins followed the expression of the genes
growth occurred. For example, in the case of aw the major determined by microarray analysis (data not shown).
gene expression peak was at 0.98, whereas optimal growth was
at 0.99. This was also true for temperature (30 1C for growth, Relative expression of single genes determined
25 1C for otapksPV expression) and pH (pH 6 for growth, pH by microarray in relation to combinations of a w
8 for otapksPV expression). The minor peak of expression was and temperature
always located at conditions, which posed a mild stress to the
In order to analyse the influence of the above two parameters
fungus. This stress was indicated by the reduced growth rate of
on single gene activation, the microarray expression data of
the fungus at that parameter value. Based on these results,
two genes, the nor-1 gene of the aflatoxin pathway (Fig. 3a)
changes in aw and temperature had a greater impact on
and the tri5 gene of the trichothecene pathway (Fig. 3b), were
otapksPV gene expression compared with pH. This expression
investigated. During this analysis the same expression pattern
behaviour is nearly 1 : 1 reflected by the phenotypic produc-
as with the real-time PCR experiments became obvious for
tion of OTA. Furthermore, the major and minor peaks of OTA
both genes, if one parameter was kept constant, e.g. one major
production were found at the same parameter values as the
peak at near optimum parameters and a minor peak under
gene expression peaks.
conditions which impose mild stress to the fungus. This was
This expression and production behaviour seems to be a
true for the data at either variable temperatures but constant
general phenomenon. The same experiments were per-
water activity or vice versa. This profile, however, was found
formed with F. culmorum and a very similar picture could
only if the constant parameter is at a moderate value, which
be observed, except that the optima and minima were
means for the minor peak that stress is only imposed by one
specific for this fungus (data not shown).
factor. If, however, both factors are in a suboptimal range the
effect acts additively or synergistically and nearly completely
Microarray expression analysis of the mycotoxin abolishes gene expression, albeit that growth was still possible
cluster genes in relation to combinations of the at the conditions analysed by the microarray. This was true for
two parameters, temperature and a w the tri5 gene at a combination of 15 1C/0.93 (Fig. 3b) or for
the nor-1 gene at combinations of 15 or 17 1C and water
In order to analyse the efficacy of combinations of the two
activities below 0.98 (Fig. 3a). Only two genes of the micro-
most effective environmental parameters (temperature, aw)
array analyses are shown as examples, although this general
on the expression of different mycotoxin biosynthesis gene
expression profile was found for many genes of the clusters.
clusters, a microarray analysis (Schmidt-Heydt & Geisen,
2007b) was performed with P. verrucosum (OTA)-,
F. culmorum (trichothecene)- and A. parasiticus (aflatoxin)-
Discussion
related gene clusters. For this, the fungal species were grown Based on the results presented here, abiotic factors such as
on YES medium (adjusted to pH 6 and to variable aw values) temperature, aw and pH have a strong influence on the
for 7 days at different temperatures. Figure 2 shows the expression of mycotoxin biosynthesis genes. This is in
results. Again, a general expression profile became clear with agreement with the findings of several other authors (Keller
all three species. Thus, two peaks of cluster gene expression et al., 1997; Geisen, 2004; Price et al., 2005; O’Callaghan
could be observed: one major peak close to parameter et al., 2006; Jurado et al., 2008). In the present study the gene
combinations which supported optimal growth, and a expression profile always paralleled and preceded the phe-
second minor peak under mild stress conditions, where only notypic biosynthesis of the analysed mycotoxins. According
slower growth was possible. These expression profiles re- to the results obtained it seems to be a generic feature of
sembled the profiles from the experiments in which only a mycotoxin biosynthesis genes that different expression opti-
single abiotic parameter was changed. It was also clear that ma in relation to changing a single external parameter
(a)
(b)
(c)
(temperature, aw, pH) exist. For P. verrucosum a clear the minor optimum occurred in an intermediate parameter
optimum for the growth rate could be defined, whereas for range, where growth was still possible but was restricted. The
gene expression a major and a minor optimum could be latter conditions represent the imposition of abiotic mild
identified for all three parameters tested. The major opti- stress to the fungus (Magan, 2007). This general behaviour
mum of gene activation was near the growth optimum and was true for all three abiotic parameters analysed. All three
c 2008 Federation of European Microbiological Societies FEMS Microbiol Lett 284 (2008) 142–149
Published by Blackwell Publishing Ltd. All rights reserved
Stress induction of mycotoxin biosynthesis genes 147
1400
presence of a regulatory system which supports pH home-
1200
ostasis in the cell (Penalva & Arst, 2002; Arst & Penalva,
1000
2003). A correlation between environment (osmotic stress),
800
stress response and trichothecene biosynthesis was recently
600
shown at the molecular level (Ochiai et al., 2007).
400 0.99
The major peaks of gene activation near the optimum
200 0.98
a growth rates do not seem to be related to any imposed
0 0.95
abiotic stress, because the growth rate of the colony was
30°C
25°C 0.93 high. However, under these conditions nutrients may often
20°C
Temperature (°C)
15°C be exhausted rapidly (especially after growth on agar plates,
when diffusion of nutrients plays a role), which may in turn
(b) lead to nutrient-related stress effects. Previous studies have
shown that N-limitation can activate aflatoxin biosynthesis
6000
(Bennett & Christensen, 1983). The reason why the major
5000
expression peak does not completely match the highest
growth rate is not clear yet. At the optimal growth rate
Relative expression
conditions might be the most stress-free growth conditions on food preservatives such sorbate and propionate support
for the fungus. At these conditions, growth rate is moderate, the stimulation of both gene expression and toxin produc-
resulting in a reduction of nutrient utilization. However, tion by P. verrucosum (Schmidt-Heydt et al., 2007). Thus,
other reasons for this phenomenon cannot be ruled out. care is needed to ensure that where control strategies are
The activated genes and levels of transcription were not used complete inhibition of growth occurs, thus limiting the
identical in the major peak compared with the minor peak. potential for activation of the mycotoxin biosynthesis genes
This might reflect differences in the response to nutritional and thus mycotoxin contamination.
stress (major peak) and abiotic stress (minor peak).
The fact that the microarray expression profile of the
respective gene cluster was similar for all three species and Acknowledgements
for three different mycotoxins (OTA/P. verrucosum; tri- This work was supported by the EU-project ‘Development
chothecene/F. culmorum; aflatoxin/A. parasiticus) again of cost-effective control and prevention strategies for emer-
strongly indicates that this is a general phenomenon. The ging and future foodborne pathogenic microorganisms
patterns of single gene expression of the microarray data throughout the food chain’ (Pathogen Combat), FOOD-
obtained nicely matches and extends the findings of the real- CT-2005-07081 and by a project of the Landesstiftung
time PCR experiments. If one factor is kept constant the Baden-Württemberg. We would like to thank Nicole
same two-peak expression patterns become obvious by Mischke, Doreen Roblick and Lars Uhlmann for skilful
changing the other factor, but only if the constant factor is technical assistance.
at a moderate value. This indicates that only moderate stress
conditions lead to induction of mycotoxin biosynthesis
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