The Krebs Cycle — Harnessing Chemical Energy

for Cellular Respiration

WHAT IS THE CITRIC ACID, TRICARBOXYLIC ACID (TCA), OR
KREBS CYCLE?
The tricarboxylic acid (TCA) cycle, also known as the Krebs or citric acid cycle, is the
main source of energy for cells and an important part of aerobic respiration. The cycle
harnesses the available chemical energy of acetyl coenzyme A (acetyl CoA) into the
reducing power of nicotinamide adenine dinucleotide (NADH).

The TCA cycle is part of the larger glucose metabolism whereby glucose is oxidized to
form pyruvate, which is then oxidized and enters the TCA cycle as acetyl-CoA.

Half of the intermediates on which the cycle depends are also the origin of pathways
leading to important compounds such as fatty acids, amino acids, or porphyrins. If any of
these intermediates are thus diverted, the integrity of the cycle is broken and the cycle
no longer functions. Production of essential energy can only be resumed if the diverted
intermediate or a subsequent intermediate that leads to oxaloacetate can be replenished
by anaplerotic (refilling) reactions.

FULL KREBS CYCLE DIAGRAM

The TCA cycle is usually described beginning with acetyl-CoA (top position). Follow the
diagram clockwise in the direction of the arrows.

KREBS CYCLE INTERMEDIATES

These intermediates are numbered on the diagram below

1. Citrate
2. Isocitrate
3. Oxoglutarate
4. Succinyl-CoA
5. Succinate
6. Fumarate
7. Malate
8. Oxaloacetate (oxaloacetic acid)
KREBS CYCLE STEPS
1. The TCA cycle begins with an enzymatic aldol addition reaction of acetyl CoA to
oxaloacetate, forming citrate.
2. The citrate is isomerized by a dehydration-hydration sequence to yield (2R,3S)-
isocitrate.
3. Further enzymatic oxidation and decarboxylation gives 2-ketoglutarate.
4. After another enzymatic decarboxylation and oxidation, 2-ketoglutarate is
transformed into succinyl-CoA.
5. The hydrolysis of this metabolite to succinate is coupled to the phosphorylation
of guanosine diphosphate (GDP) to guanosine triphosphate (GTP).
6. Enzymatic desaturation by flavin adenine dinucleotide (FAD)-dependent succinate
dehydrogenase yields fumarate.
7. After stereospecific hydration, fumarate catalyzed by fumarase is transformed to
L-malate.
8. The last step of NAD-coupled oxidation of L-malate to oxaloacetate is catalyzed
by malate dehydrogenase and closes the cycle.

WHERE DOES THE HYDROGEN IN 4(NADH+H+) AND UQH  COME 2

FROM?
The reducing power at this stage is largely conserved as NADH and ubiquinol (UQH 2) in
the mitochondrial inner membrane prior to a series of oxidation reactions that end in
water. These oxidations power the translocation of protons from the matrix to the
intermembrane space. This leads to a potential gradient (proton pump) that drives the
retro-location of protons to the matrix and thus activates ATP synthase, which catalyzes
ATP formation.

WHERE DOES THE KREBS CYCLE TAKE PLACE?

The TCA cycle was first observed in the muscle tissue of a pigeon. It takes place in all
eukaryotic and prokaryotic cells. In eukaryotes, it occurs in the matrix of the
mitochondrion. In prokaryotes, it takes place in the cytosol.

KREBS CYCLE PRODUCTS

Before the Krebs cycle begins, a glucose molecule must be converted to acetyl-CoA. This
process yields 2 acetyl-CoA molecules to be fed into the cycle. Thus, the cycle proceeds
twice per original glucose, yielding twice the products shown below.

One TCA cycle "turn" yields 7 products:

 GTP
  3 NADH
 FADH2, which is converted to UQH2 in the presence of coenzyme Q (ubiquinone)
 2 CO2 (carbon dioxide)

WHAT IS PYRUVATE?
Pyruvate is a biological molecule and product of glucose metabolism that reacts with
adenosine triphosphate and carbon dioxide, converting it into acetyl-CoA and adenosine
diphosphate (ADP) at the beginning of the TCA cycle. It is often included in the
introductory or preliminary step of the cycle.

Pyruvate usually derives from the glycolysis product pyruvic acid, which quickly
dissociates in most natural systems, leaving pyruvate.

Pyruvate plays an important role in multiple biotransformations, as explained in greater

depth in the article Pyruvate Transformations.

HISTORY OF THE KREBS CYCLE

German chemist Hans Adolf Krebs' discovery of this cycle in 1937 marked a milestone in
biochemistry. Krebs received the Nobel Prize for Physiology or Medicine in 1953 for
this contribution to the study of intermediary metabolism in the oxidative breakdown of
carbohydrates. Krebs and his coauthor William Arthur Johnson published their findings
"The role of citric acid in intermediate metabolism in animal tissues" in Enzymologia after
being rejected by Nature. That original publication was followed by many more.

THE TCA CYCLE IN RESEARCH

The TCA cycle is of special interest to researchers in the field of metabolomics. By
studying the rates, by-products, enzymatic activity, and other qualities of processes of
metabolism, researchers can draw conclusions about diseases and investigate the
efficacy of therapies.

KEY TCA CYCLE ENZYMES

 Malic dehydrogenase
 α-Ketoglutarate dehydrogenase
 Citrate synthase
 Fumarase
 Aconitase

TCA CYCLE APPLICATIONS

These TCA-related metabolic applications are commonly studied using stable isotope-
labeled compounds and mass spectrometry:

 Lipid Metabolism
 Amino Acid Metabolism
 Protein Metabolism (Turnover)
 Glucose Metabolism
 Energy Expenditure
 Metabolomics

We sell TCA metabolites and enzymes for pinpointing metabolic processes as well as
stable isotope-tagged compounds that can aid in measuring rates of whole body
metabolism or glucose metabolism. Stable isotope-enriched compounds are
metabolically similar to natural homologues, making them safe to use as tracers.