ANOVA DAN UJI LANJUT IPB WT VS IPB-8-III

> inur.ipbt11 <- read.table("clipboard", header = T)

> str(inur.ipbt11)
'data.frame': 15 obs. of 17 variables:
$ GALUR : Factor w/ 2 levels "IPB_8_III","IPB_WT": 2 2 2 2 2 1 1 1 1 1 ...
$ No_NoTan : Factor w/ 15 levels "1","1_1","10_12",..: 1 4 6 8 10 2 5 7 9 11 ...
$ T_DB : num 139 144 138 141 146 ...
$ T_M : num 121 125 119 118 125 ...
$ PDB : num 43.8 46.8 44.8 52.2 52.7 ...
$ LDB : num 2.37 2.6 2 2.33 2.53 ...
$ JINT : int 5 5 5 5 5 5 5 5 5 5 ...
$ PA : int 0 0 0 0 0 0 0 0 0 0 ...
$ JMP : int 6 3 6 3 9 9 8 2 10 10 ...
$ PM : num 28.7 29.5 25.2 29.3 26.9 ...
$ GI : num 118 150 49 162 186 ...
$ GH : num 146 122 138 202 159 ...
$ GTOT : num 264 272 187 363 345 ...
$ X100_.gram.: num 3.16 2.86 3.78 2.68 3.26 2.77 2.51 2.41 2.73 2.73 ...
$ B.R_.gram. : num 11.02 10.69 4.95 15.39 17.84 ...
$ UB_.Hari. : int 65 61 58 58 58 63 60 63 58 58 ...
$ UP_.Hari. : int 99 99 99 99 99 93 93 99 99 99 ...
> model <- lm(T_DB~GALUR,data=inur.ipbt11)
> summary.aov(model)
Df Sum Sq Mean Sq F value Pr(>F)
GALUR 1 1460.7 1460.7 19.26 0.000734 ***
Residuals 13 986.1 75.9
---
Signif. codes: 0 ‘***’ 0.001 ‘**’ 0.01 ‘*’ 0.05 ‘.’ 0.1 ‘ ’ 1
> library(agricolae)
> duncan <- duncan.test(model,"GALUR",alpha=0.05)
> duncan
$statistics
MSerror Df Mean CV
75.85727 13 127.6444 6.823335

$parameters
test name.t ntr alpha
Duncan GALUR 2 0.05

$duncan
NULL

$means
T_DB std r Min Max Q25 Q50 Q75
IPB_8_III 120.6667 10.221014 10 99.5 132.6667 118 121.7500 127.7083
IPB_WT 141.6000 3.388297 5 138.0 146.3333 139 141.1667 143.5000

$comparison
NULL

$groups
T_DB groups
IPB_WT 141.6000 a
IPB_8_III 120.6667 b

attr(,"class")
[1] "group"
> model <- lm(T_M~GALUR,data=inur.ipbt11)
> summary.aov(model)
Df Sum Sq Mean Sq F value Pr(>F)
GALUR 1 780.3 780.3 5.713 0.0327 *
Residuals 13 1775.5 136.6
---
Signif. codes: 0 ‘***’ 0.001 ‘**’ 0.01 ‘*’ 0.05 ‘.’ 0.1 ‘ ’ 1
> library(agricolae)
> duncan <- duncan.test(model,"GALUR",alpha=0.05)
> duncan
$statistics
MSerror Df Mean CV
136.5803 13 111.2 10.50968

$parameters
test name.t ntr alpha
Duncan GALUR 2 0.05

$duncan
NULL

$means
T_M std r Min Max Q25 Q50 Q75
IPB_8_III 106.1 13.871367 10 87.0000 121.8333 93.04167 107.0000 118.1667
IPB_WT 121.4 3.309498 5 117.6667 124.8333 119.00000 120.6667 124.8333

$comparison
NULL

$groups
T_M groups
IPB_WT 121.4 a
IPB_8_III 106.1 b

attr(,"class")
[1] "group"
> model <- lm(PDB~GALUR,data=inur.ipbt11)
> summary.aov(model)
Df Sum Sq Mean Sq F value Pr(>F)
GALUR 1 88.7 88.69 2.053 0.175
Residuals 13 561.6 43.20
> library(agricolae)
> duncan <- duncan.test(model,"GALUR",alpha=0.05)
> duncan
$statistics
MSerror Df Mean CV
43.19749 13 44.62778 14.72733

$parameters
test name.t ntr alpha
Duncan GALUR 2 0.05
$duncan
NULL

$means
PDB std r Min Max Q25 Q50 Q75
IPB_8_III 42.90833 7.406459 10 30.00000 52.75000 38.66667 42.33333 49.54167
IPB_WT 48.06667 4.119061 5 43.83333 52.66667 44.83333 46.83333 52.16667

$comparison
NULL

$groups
PDB groups
IPB_WT 48.06667 a
IPB_8_III 42.90833 a

attr(,"class")
[1] "group"
> model <- lm(LDB~GALUR,data=inur.ipbt11)
> summary.aov(model)
Df Sum Sq Mean Sq F value Pr(>F)
GALUR 1 1.0641 1.0641 19.06 0.000765 ***
Residuals 13 0.7258 0.0558
---
Signif. codes: 0 ‘***’ 0.001 ‘**’ 0.01 ‘*’ 0.05 ‘.’ 0.1 ‘ ’ 1
> library(agricolae)
> duncan <- duncan.test(model,"GALUR",alpha=0.05)
> duncan
$statistics
MSerror Df Mean CV
0.0558312 13 1.99 11.87368

$parameters
test name.t ntr alpha
Duncan GALUR 2 0.05

$duncan
NULL

$means
LDB std r Min Max Q25 Q50 Q75
IPB_8_III 1.801667 0.2375869 10 1.4 2.1 1.675000 1.900000 1.958333
IPB_WT 2.366667 0.2333333 5 2.0 2.6 2.333333 2.366667 2.533333

$comparison
NULL

$groups
LDB groups
IPB_WT 2.366667 a
IPB_8_III 1.801667 b

attr(,"class")
[1] "group"
> model <- lm(JINT~GALUR,data=inur.ipbt11)
> summary.aov(model)
Df Sum Sq Mean Sq F value Pr(>F)
GALUR 1 7.060e-31 7.060e-31 2.167 0.165
Residuals 13 4.236e-30 3.259e-31
> library(agricolae)
> duncan <- duncan.test(model,"GALUR",alpha=0.05)
> duncan
$statistics
MSerror Df Mean CV
3.258514e-31 13 5 1.141668e-14

$parameters
test name.t ntr alpha
Duncan GALUR 2 0.05
$duncan
NULL

$means
JINT std r Min Max Q25 Q50 Q75
IPB_8_III 5 0 10 5 5 5 5 5
IPB_WT 5 0 5 5 5 5 5 5

$comparison
NULL

$groups
JINT groups
IPB_8_III 5 a
IPB_WT 5 a

attr(,"class")
[1] "group"
> model <- lm(PA~GALUR,data=inur.ipbt11)
> summary.aov(model)
Df Sum Sq Mean Sq F value Pr(>F) PANJANG AKAR TIDAK DIUKUR
GALUR 1 0 0
Residuals 13 0 0
> library(agricolae)
> duncan <- duncan.test(model,"GALUR",alpha=0.05)
Error in if (pvalue[k] <= 0.001) sig[k] <- "***" else if (pvalue[k] <= :
missing value where TRUE/FALSE needed
> model <- lm(JMP~GALUR,data=inur.ipbt11)
> summary.aov(model)
Df Sum Sq Mean Sq F value Pr(>F)
GALUR 1 8.53 8.533 0.688 0.422
Residuals 13 161.20 12.400
> library(agricolae)
> duncan <- duncan.test(model,"GALUR",alpha=0.05)
> duncan
$statistics
MSerror Df Mean CV
12.4 13 6.466667 54.45407

$parameters
test name.t ntr alpha
Duncan GALUR 2 0.05

$duncan
NULL

$means
JMP std r Min Max Q25 Q50 Q75
IPB_8_III 7.0 3.887301 10 2 13 3 8 9.75
IPB_WT 5.4 2.509980 5 3 9 3 6 6.00

$comparison
NULL

$groups
JMP groups
IPB_8_III 7.0 a
IPB_WT 5.4 a

attr(,"class")
[1] "group"
> model <- lm(PM~GALUR,data=inur.ipbt11)
> summary.aov(model)
Df Sum Sq Mean Sq F value Pr(>F)
GALUR 1 3.07 3.072 0.275 0.609
Residuals 13 145.00 11.154
> library(agricolae)
> duncan <- duncan.test(model,"GALUR",alpha=0.05)
> duncan
$statistics
MSerror Df Mean CV
11.15353 13 28.58 11.68541

$parameters
test name.t ntr alpha
Duncan GALUR 2 0.05

$duncan
NULL

$means
PM std r Min Max Q25 Q50 Q75
IPB_8_III 28.90 3.822892 10 20.55000 33.26667 27.05 29.075 31.82500
IPB_WT 27.94 1.834757 5 25.23333 29.53333 26.90 28.700 29.33333

$comparison
NULL

$groups
PM groups
IPB_8_III 28.90 a
IPB_WT 27.94 a
attr(,"class")
[1] "group"
> model <- lm(GI~GALUR,data=inur.ipbt11)
> summary.aov(model)
Df Sum Sq Mean Sq F value Pr(>F)
GALUR 1 762 762 0.225 0.643
Residuals 13 43972 3382
> library(agricolae)
> duncan <- duncan.test(model,"GALUR",alpha=0.05)
> duncan
$statistics
MSerror Df Mean CV
3382.477 13 143.0111 40.66752

$parameters
test name.t ntr alpha
Duncan GALUR 2 0.05

$duncan
NULL

$means
GI std r Min Max Q25 Q50 Q75
IPB_8_III 148.0500 60.34295 10 54 228.6667 101.9583 141 190.6667
IPB_WT 132.9333 52.91681 5 49 186.0000 118.0000 150 161.6667

$comparison
NULL

$groups
GI groups
IPB_8_III 148.0500 a
IPB_WT 132.9333 a

attr(,"class")
[1] "group"
> model <- lm(GH~GALUR,data=inur.ipbt11)
> summary.aov(model)
Df Sum Sq Mean Sq F value Pr(>F)
GALUR 1 6997 6997 4.056 0.0652 .
Residuals 13 22429 1725
---
Signif. codes: 0 ‘***’ 0.001 ‘**’ 0.01 ‘*’ 0.05 ‘.’ 0.1 ‘ ’ 1
> library(agricolae)
> duncan <- duncan.test(model,"GALUR",alpha=0.05)
> duncan
$statistics
MSerror Df Mean CV
1725.297 13 122.9889 33.77272

$parameters
test name.t ntr alpha
Duncan GALUR 2 0.05

$duncan
NULL

$means
GH std r Min Max Q25 Q50 Q75
IPB_8_III 107.7167 45.70579 10 17.5 155.0000 82.66667 124.4167 142.2500
IPB_WT 153.5333 30.11515 5 122.0 201.6667 138.33333 146.3333 159.3333

$comparison
NULL

$groups
GH groups
IPB_WT 153.5333 a
IPB_8_III 107.7167 a
attr(,"class")
[1] "group"
> model <- lm(GTOT~GALUR,data=inur.ipbt11)
> summary.aov(model)
Df Sum Sq Mean Sq F value Pr(>F)
GALUR 1 3142 3142 0.368 0.554
Residuals 13 110926 8533
> library(agricolae)
> duncan <- duncan.test(model,"GALUR",alpha=0.05)
> duncan
$statistics
MSerror Df Mean CV
8532.768 13 266 34.72668

$parameters
test name.t ntr alpha
Duncan GALUR 2 0.05

$duncan
NULL

$means
GTOT std r Min Max Q25 Q50 Q75
IPB_8_III 255.7667 100.56818 10 71.5000 378.3333 212.2917 240.6667 340.7500
IPB_WT 286.4667 70.53431 5 187.3333 363.3333 264.3333 272.0000 345.3333

$comparison
NULL

$groups
GTOT groups
IPB_WT 286.4667 a
IPB_8_III 255.7667 a

attr(,"class")
[1] "group"
> model <- lm(X100_.gram.~GALUR,data=inur.ipbt11)
> summary.aov(model)
Df Sum Sq Mean Sq F value Pr(>F)
GALUR 1 0.666 0.6660 8.486 0.0121 *
Residuals 13 1.020 0.0785
---
Signif. codes: 0 ‘***’ 0.001 ‘**’ 0.01 ‘*’ 0.05 ‘.’ 0.1 ‘ ’ 1
> library(agricolae)
> duncan <- duncan.test(model,"GALUR",alpha=0.05)
> duncan
$statistics
MSerror Df Mean CV
0.07849 13 2.85 9.830199

$parameters
test name.t ntr alpha
Duncan GALUR 2 0.05

$duncan
NULL

$means
X100_.gram. std r Min Max Q25 Q50 Q75
IPB_8_III 2.701 0.1844782 10 2.41 3.01 2.5575 2.73 2.7625
IPB_WT 3.148 0.4225163 5 2.68 3.78 2.8600 3.16 3.2600

$comparison
NULL

$groups
X100_.gram. groups
IPB_WT 3.148 a
IPB_8_III 2.701 b

attr(,"class")
[1] "group"
> model <- lm(B.R_.gram.~GALUR,data=inur.ipbt11)
> summary.aov(model)
Df Sum Sq Mean Sq F value Pr(>F)
GALUR 1 65.4 65.45 1.25 0.284
Residuals 13 680.4 52.34
> library(agricolae)
> duncan <- duncan.test(model,"GALUR",alpha=0.05)
> duncan
$statistics
MSerror Df Mean CV
52.33989 13 14.932 48.45052

$parameters
test name.t ntr alpha
Duncan GALUR 2 0.05

$duncan
NULL

$means
B.R_.gram. std r Min Max Q25 Q50 Q75
IPB_8_III 16.409 8.044628 10 4.78 26.65 9.26 17.43 20.81
IPB_WT 11.978 4.949098 5 4.95 17.84 10.69 11.02 15.39

$comparison
NULL

$groups
B.R_.gram. groups
IPB_8_III 16.409 a
IPB_WT 11.978 a

attr(,"class")
[1] "group"
> model <- lm(UB_.Hari.~GALUR,data=inur.ipbt11)
> summary.aov(model)
Df Sum Sq Mean Sq F value Pr(>F)
GALUR 1 0.53 0.533 0.093 0.765
Residuals 13 74.40 5.723
> library(agricolae)
> duncan <- duncan.test(model,"GALUR",alpha=0.05)
> duncan
$statistics
MSerror Df Mean CV
5.723077 13 59.73333 4.004959

$parameters
test name.t ntr alpha
Duncan GALUR 2 0.05

$duncan
NULL

$means
UB_.Hari. std r Min Max Q25 Q50 Q75
IPB_8_III 59.6 2.011080 10 58 63 58 59 60
IPB_WT 60.0 3.082207 5 58 65 58 58 61

$comparison
NULL

$groups
UB_.Hari. groups
IPB_WT 60.0 a
IPB_8_III 59.6 a
attr(,"class")
[1] "group"
> model <- lm(UP_.Hari.~GALUR,data=inur.ipbt11)
> summary.aov(model)
Df Sum Sq Mean Sq F value Pr(>F)
GALUR 1 19.2 19.2 4 0.0668 .
Residuals 13 62.4 4.8
---
Signif. codes: 0 ‘***’ 0.001 ‘**’ 0.01 ‘*’ 0.05 ‘.’ 0.1 ‘ ’ 1
> library(agricolae)
> duncan <- duncan.test(model,"GALUR",alpha=0.05)
> duncan
$statistics
MSerror Df Mean CV
4.8 13 97.4 2.249374

$parameters
test name.t ntr alpha
Duncan GALUR 2 0.05

$duncan
NULL

$means
UP_.Hari. std r Min Max Q25 Q50 Q75
IPB_8_III 96.6 2.633122 10 93 99 95 97 99
IPB_WT 99.0 0.000000 5 99 99 99 99 99

$comparison
NULL

$groups
UP_.Hari. groups
IPB_WT 99.0 a
IPB_8_III 96.6 a

attr(,"class")
[1] "group"

>
 ANOVA DAN UJI LANJUT IPB WT VS IPB-14
> inur.ipbt12 <- read.table("clipboard", header = T)
> str(inur.ipbt12)
'data.frame': 15 obs. of 17 variables:
$ GALUR : Factor w/ 2 levels "IPB_14","IPB_WT": 2 2 2 2 2 1 1 1 1
1 ...
$ No_NoTan : Factor w/ 15 levels "1","1_3","10_12",..: 1 4 6 8 10 2 5 7
9 11 ...
$ T_DB : num 139 144 138 141 146 ...
$ T_M : num 121 125 119 118 125 ...
$ PDB : num 43.8 46.8 44.8 52.2 52.7 ...
$ LDB : num 2.37 2.6 2 2.33 2.53 ...
$ JINT : int 5 5 5 5 5 5 5 5 5 5 ...
$ PA : int 0 0 0 0 0 0 0 0 0 0 ...
$ JMP : int 6 3 6 3 9 9 7 8 10 10 ...
$ PM : num 28.7 29.5 25.2 29.3 26.9 ...
$ GI : num 118 150 49 162 186 ...
$ GH : num 146 122 138 202 159 ...
$ GTOT : num 264 272 187 363 345 ...
$ X100_.gram.: num 3.16 2.86 3.78 2.68 3.26 2.97 2.73 2.71 2.37 2.92 ...
$ B.R_.gram. : num 11.02 10.69 4.95 15.39 17.84 ...
$ UB_.Hari. : int 65 61 58 58 58 57 56 56 60 58 ...
$ UP_.Hari. : int 99 99 99 99 99 93 93 93 93 93 ...
> model <- lm(T_DB~GALUR,data=inur.ipbt12)
> summary.aov(model)
Df Sum Sq Mean Sq F value Pr(>F)
GALUR 1 1663 1662.6 21.54 0.000462 ***
Residuals 13 1004 77.2
---
Signif. codes: 0 ‘***’ 0.001 ‘**’ 0.01 ‘*’ 0.05 ‘.’ 0.1 ‘ ’ 1
> library(agricolae)
> duncan <- duncan.test(model,"GALUR",alpha=0.05)
> duncan
$statistics
MSerror Df Mean CV
77.19573 13 126.7111 6.93397

$parameters
test name.t ntr alpha
Duncan GALUR 2 0.05

$duncan
NULL

$means
T_DB std r Min Max Q25 Q50 Q75
IPB_14 119.2667 10.315157 10 104.6667 132.6667 110.875 119.0833 128.0417
IPB_WT 141.6000 3.388297 5 138.0000 146.3333 139.000 141.1667 143.5000

$comparison
NULL

$groups
T_DB groups
IPB_WT 141.6000 a
IPB_14 119.2667 b

attr(,"class")
[1] "group"
> model <- lm(T_M~GALUR,data=inur.ipbt12)
> summary.aov(model)
Df Sum Sq Mean Sq F value Pr(>F)
GALUR 1 707.3 707.3 13.16 0.00306 **
Residuals 13 698.5 53.7
---
Signif. codes: 0 ‘***’ 0.001 ‘**’ 0.01 ‘*’ 0.05 ‘.’ 0.1 ‘ ’ 1
> library(agricolae)
> duncan <- duncan.test(model,"GALUR",alpha=0.05)
> duncan
$statistics
MSerror Df Mean CV
53.73333 13 111.6889 6.563144

$parameters
test name.t ntr alpha
Duncan GALUR 2 0.05

$duncan
NULL

$means
T_M std r Min Max Q25 Q50 Q75
IPB_14 106.8333 8.529180 10 88.66667 117.0000 104.1667 108.3333 112.7500
IPB_WT 121.4000 3.309498 5 117.66667 124.8333 119.0000 120.6667 124.8333

$comparison
NULL

$groups
T_M groups
IPB_WT 121.4000 a
IPB_14 106.8333 b

attr(,"class")
[1] "group"
> model <- lm(PDB~GALUR,data=inur.ipbt12)
> summary.aov(model)
Df Sum Sq Mean Sq F value Pr(>F)
GALUR 1 172.6 172.64 2.929 0.111
Residuals 13 766.2 58.94
> library(agricolae)
> duncan <- duncan.test(model,"GALUR",alpha=0.05)
> duncan
$statistics
MSerror Df Mean CV
58.93666 13 43.26889 17.74259

$parameters
test name.t ntr alpha
Duncan GALUR 2 0.05

$duncan
NULL

$means
PDB std r Min Max Q25 Q50 Q75
IPB_14 40.87000 8.808518 10 30.70000 59.00000 33.87500 40.16667 43.16667
IPB_WT 48.06667 4.119061 5 43.83333 52.66667 44.83333 46.83333 52.16667

$comparison
NULL
$groups
PDB groups
IPB_WT 48.06667 a
IPB_14 40.87000 a

attr(,"class")
[1] "group"
> model <- lm(LDB~GALUR,data=inur.ipbt12)
> summary.aov(model)
Df Sum Sq Mean Sq F value Pr(>F)
GALUR 1 0.8223 0.8223 20.87 0.000527 ***
Residuals 13 0.5121 0.0394
---
Signif. codes: 0 ‘***’ 0.001 ‘**’ 0.01 ‘*’ 0.05 ‘.’ 0.1 ‘ ’ 1
> library(agricolae)
> duncan <- duncan.test(model,"GALUR",alpha=0.05)
> duncan
$statistics
MSerror Df Mean CV
0.03939316 13 2.035556 9.750513

$parameters
test name.t ntr alpha
Duncan GALUR 2 0.05

$duncan
NULL

$means
LDB std r Min Max Q25 Q50 Q75
IPB_14 1.870000 0.1808417 10 1.566667 2.066667 1.758333 1.933333 2.000000
IPB_WT 2.366667 0.2333333 5 2.000000 2.600000 2.333333 2.366667 2.533333

$comparison
NULL

$groups
LDB groups
IPB_WT 2.366667 a
IPB_14 1.870000 b

attr(,"class")
[1] "group"
> model <- lm(JINT~GALUR,data=inur.ipbt12)
> summary.aov(model)
Df Sum Sq Mean Sq F value Pr(>F)
GALUR 1 0.0333 0.03333 0.481 0.5
Residuals 13 0.9000 0.06923
> library(agricolae)
> duncan <- duncan.test(model,"GALUR",alpha=0.05)
> duncan
$statistics
MSerror Df Mean CV
0.06923077 13 4.933333 5.333461

$parameters
test name.t ntr alpha
Duncan GALUR 2 0.05

$duncan
NULL
$means
JINT std r Min Max Q25 Q50 Q75
IPB_14 4.9 0.3162278 10 4 5 5 5 5
IPB_WT 5.0 0.0000000 5 5 5 5 5 5

$comparison
NULL

$groups
JINT groups
IPB_WT 5.0 a
IPB_14 4.9 a

attr(,"class")
[1] "group"
> model <- lm(PA~GALUR,data=inur.ipbt12)
> summary.aov(model)
Df Sum Sq Mean Sq F value Pr(>F)
GALUR 1 0 0
Residuals 13 0 0
> model <- lm(JMP~GALUR,data=inur.ipbt12)
> summary.aov(model)
Df Sum Sq Mean Sq F value Pr(>F)
GALUR 1 16.13 16.133 2.929 0.111
Residuals 13 71.60 5.508
> library(agricolae)
> duncan <- duncan.test(model,"GALUR",alpha=0.05)
> duncan
$statistics
MSerror Df Mean CV
5.507692 13 6.866667 34.17739

$parameters
test name.t ntr alpha
Duncan GALUR 2 0.05

$duncan
NULL

$means
JMP std r Min Max Q25 Q50 Q75
IPB_14 7.6 2.270585 10 4 10 6.25 8.5 9
IPB_WT 5.4 2.509980 5 3 9 3.00 6.0 6

$comparison
NULL

$groups
JMP groups
IPB_14 7.6 a
IPB_WT 5.4 a

attr(,"class")
[1] "group"
> model <- lm(PM~GALUR,data=inur.ipbt12)
> summary.aov(model)
Df Sum Sq Mean Sq F value Pr(>F)
GALUR 1 49.32 49.32 4.943 0.0445 *
Residuals 13 129.72 9.98
---
Signif. codes: 0 ‘***’ 0.001 ‘**’ 0.01 ‘*’ 0.05 ‘.’ 0.1 ‘ ’ 1
> library(agricolae)
> duncan <- duncan.test(model,"GALUR",alpha=0.05)
> duncan
$statistics
MSerror Df Mean CV
9.978393 13 30.50444 10.35541

$parameters
test name.t ntr alpha
Duncan GALUR 2 0.05

$duncan
NULL

$means
PM std r Min Max Q25 Q50 Q75
IPB_14 31.78667 3.594035 10 26.93333 40.33333 30.75833 31.31667 32.05000
IPB_WT 27.94000 1.834757 5 25.23333 29.53333 26.90000 28.70000 29.33333

$comparison
NULL

$groups
PM groups
IPB_14 31.78667 a
IPB_WT 27.94000 b

attr(,"class")
[1] "group"
> model <- lm(GI~GALUR,data=inur.ipbt12)
> summary.aov(model)
Df Sum Sq Mean Sq F value Pr(>F)
GALUR 1 171 171 0.05 0.826
Residuals 13 44415 3417
> library(agricolae)
> duncan <- duncan.test(model,"GALUR",alpha=0.05)
> duncan
$statistics
MSerror Df Mean CV
3416.521 13 128.1556 45.60942

$parameters
test name.t ntr alpha
Duncan GALUR 2 0.05

$duncan
NULL

$means
GI std r Min Max Q25 Q50 Q75
IPB_14 125.7667 60.74904 10 42.66667 245.3333 83.75 118 160.2500
IPB_WT 132.9333 52.91681 5 49.00000 186.0000 118.00 150 161.6667

$comparison
NULL

$groups
GI groups
IPB_WT 132.9333 a
IPB_14 125.7667 a

attr(,"class")
[1] "group"
> model <- lm(GH~GALUR,data=inur.ipbt12)
> summary.aov(model)
Df Sum Sq Mean Sq F value Pr(>F)
GALUR 1 5061 5061 0.705 0.416
Residuals 13 93389 7184
> library(agricolae)
> duncan <- duncan.test(model,"GALUR",alpha=0.05)
> duncan
$statistics
MSerror Df Mean CV
7183.806 13 127.5556 66.44739

$parameters
test name.t ntr alpha
Duncan GALUR 2 0.05

$duncan
NULL

$means
GH std r Min Max Q25 Q50
Q75
IPB_14 114.5667 99.86757 10 1.333333 331.3333 61.91667 70.0000
142.2500
IPB_WT 153.5333 30.11515 5 122.000000 201.6667 138.33333 146.3333
159.3333

$comparison
NULL

$groups
GH groups
IPB_WT 153.5333 a
IPB_14 114.5667 a

attr(,"class")
[1] "group"
> model <- lm(GTOT~GALUR,data=inur.ipbt12)
> summary.aov(model)
Df Sum Sq Mean Sq F value Pr(>F)
GALUR 1 7094 7094 1.007 0.334
Residuals 13 91541 7042
> library(agricolae)
> duncan <- duncan.test(model,"GALUR",alpha=0.05)
> duncan
$statistics
MSerror Df Mean CV
7041.634 13 255.7111 32.81611

$parameters
test name.t ntr alpha
Duncan GALUR 2 0.05

$duncan
NULL

$means
GTOT std r Min Max Q25 Q50 Q75
IPB_14 240.3333 89.21939 10 136.0000 413.6667 174.9167 226.5 291.3333
IPB_WT 286.4667 70.53431 5 187.3333 363.3333 264.3333 272.0 345.3333

$comparison
NULL

$groups
GTOT groups
IPB_WT 286.4667 a
IPB_14 240.3333 a

attr(,"class")
[1] "group"
> model <- lm(X100_.gram.~GALUR,data=inur.ipbt12)
> summary.aov(model)
Df Sum Sq Mean Sq F value Pr(>F)
GALUR 1 0.4296 0.4296 4.864 0.046 *
Residuals 13 1.1482 0.0883
---
Signif. codes: 0 ‘***’ 0.001 ‘**’ 0.01 ‘*’ 0.05 ‘.’ 0.1 ‘ ’ 1
> library(agricolae)
> duncan <- duncan.test(model,"GALUR",alpha=0.05)
> duncan
$statistics
MSerror Df Mean CV
0.08832077 13 2.908667 10.21733

$parameters
test name.t ntr alpha
Duncan GALUR 2 0.05

$duncan
NULL

$means
X100_.gram. std r Min Max Q25 Q50 Q75
IPB_14 2.789 0.2196184 10 2.37 3.17 2.6875 2.775 2.915
IPB_WT 3.148 0.4225163 5 2.68 3.78 2.8600 3.160 3.260

$comparison
NULL

$groups
X100_.gram. groups
IPB_WT 3.148 a
IPB_14 2.789 b

attr(,"class")
[1] "group"
> model <- lm(B.R_.gram.~GALUR,data=inur.ipbt12)
> summary.aov(model)
Df Sum Sq Mean Sq F value Pr(>F)
GALUR 1 55.5 55.54 0.636 0.439
Residuals 13 1134.7 87.28
> library(agricolae)
> duncan <- duncan.test(model,"GALUR",alpha=0.05)
> duncan
$statistics
MSerror Df Mean CV
87.28247 13 14.69933 63.55736

$parameters
test name.t ntr alpha
Duncan GALUR 2 0.05

$duncan
NULL

$means
B.R_.gram. std r Min Max Q25 Q50 Q75
IPB_14 16.060 10.732597 10 3.17 38.51 10.6175 13.515 17.58
IPB_WT 11.978 4.949098 5 4.95 17.84 10.6900 11.020 15.39

$comparison
NULL

$groups
B.R_.gram. groups
IPB_14 16.060 a
IPB_WT 11.978 a

attr(,"class")
[1] "group"
> model <- lm(UB_.Hari.~GALUR,data=inur.ipbt12)
> summary.aov(model)
Df Sum Sq Mean Sq F value Pr(>F)
GALUR 1 8.53 8.533 1.127 0.308
Residuals 13 98.40 7.569
> library(agricolae)
> duncan <- duncan.test(model,"GALUR",alpha=0.05)
> duncan
$statistics
MSerror Df Mean CV
7.569231 13 58.93333 4.668366

$parameters
test name.t ntr alpha
Duncan GALUR 2 0.05

$duncan
NULL

$means
UB_.Hari. std r Min Max Q25 Q50 Q75
IPB_14 58.4 2.590581 10 56 65 57.25 58 58
IPB_WT 60.0 3.082207 5 58 65 58.00 58 61

$comparison
NULL

$groups
UB_.Hari. groups
IPB_WT 60.0 a
IPB_14 58.4 a

attr(,"class")
[1] "group"
> model <- lm(UP_.Hari.~GALUR,data=inur.ipbt12)
> summary.aov(model)
Df Sum Sq Mean Sq F value Pr(>F)
GALUR 1 104.5 104.53 212.3 1.97e-09 ***
Residuals 13 6.4 0.49
---
Signif. codes: 0 ‘***’ 0.001 ‘**’ 0.01 ‘*’ 0.05 ‘.’ 0.1 ‘ ’ 1
> library(agricolae)
> duncan <- duncan.test(model,"GALUR",alpha=0.05)
> duncan
$statistics
 MSerror Df Mean CV
0.4923077 13 95.26667 0.7365078

$parameters
test name.t ntr alpha
Duncan GALUR 2 0.05

$duncan
NULL

$means
UP_.Hari. std r Min Max Q25 Q50 Q75
IPB_14 93.4 0.843274 10 93 95 93 93 93
IPB_WT 99.0 0.000000 5 99 99 99 99 99

$comparison
NULL

$groups
UP_.Hari. groups
IPB_WT 99.0 a
IPB_14 93.4 b

attr(,"class")
[1] "group"
 ANOVA DAN UJI LANJUT IPB WT VS IPB NULL

> inur.ipbt13 <- read.table("clipboard", header = T)

> str(inur.ipbt13)
'data.frame': 10 obs. of 17 variables:
$ GALUR : Factor w/ 2 levels "IPB_NULL","IPB_WT": 2 2 2 2 2 1 1 1 1
1
$ No_NoTan : int 1 2 3 4 5 1 2 3 4 5
$ T_DB : num 139 144 138 141 146 ...
$ T_M : num 121 125 119 118 125 ...
$ PDB : num 43.8 46.8 44.8 52.2 52.7 ...
$ LDB : num 2.37 2.6 2 2.33 2.53 ...
$ JINT : num 5 5 5 5 5 5.5 5 5 5 5
$ PA : int 0 0 0 0 0 0 0 0 0 0
$ JMP : int 6 3 6 3 9 2 8 8 8 10
$ PM : num 28.7 29.5 25.2 29.3 26.9 ...
$ GI : num 118 150 49 162 186 ...
$ GH : num 146 122 138 202 159 ...
$ GTOT : num 264 272 187 363 345 ...
$ X100_.gram.: num 3.16 2.86 3.78 2.68 3.26 2.6 2.59 2.77 2.7 3.09
$ B.R_.gram. : num 11.02 10.69 4.95 15.39 17.84 ...
$ UB_.Hari. : int 65 61 58 58 58 61 58 58 58 58
$ UP_.Hari. : int 99 99 99 99 99 95 95 95 95 95
> model <- lm(T_DB~GALUR,data=inur.ipbt13)
> summary.aov(model)
Df Sum Sq Mean Sq F value Pr(>F)
GALUR 1 238.5 238.5 7.948 0.0225 *
Residuals 8 240.0 30.0
---
Signif. codes: 0 ‘***’ 0.001 ‘**’ 0.01 ‘*’ 0.05 ‘.’ 0.1 ‘ ’ 1
> library(agricolae)
> duncan <- duncan.test(model,"GALUR",alpha=0.05)
> duncan
$statistics
MSerror Df Mean CV
30.00417 8 136.7167 4.006539

$parameters
test name.t ntr alpha
Duncan GALUR 2 0.05

$duncan
Table CriticalRange
2 3.261182 7.988787

$means
T_DB std r Min Max Q25 Q50 Q75
IPB_NULL 131.8333 6.966188 5 120.5 137.6667 131 132.6667 137.3333
IPB_WT 141.6000 3.388297 5 138.0 146.3333 139 141.1667 143.5000

$comparison
NULL

$groups
T_DB groups
IPB_WT 141.6000 a
IPB_NULL 131.8333 b

attr(,"class")
[1] "group"
> model <- lm(T_M~GALUR,data=inur.ipbt13)
> summary.aov(model)
Df Sum Sq Mean Sq F value Pr(>F)
GALUR 1 122.5 122.50 4.112 0.0771 .
Residuals 8 238.3 29.79
---
Signif. codes: 0 ‘***’ 0.001 ‘**’ 0.01 ‘*’ 0.05 ‘.’ 0.1 ‘ ’ 1
> library(agricolae)
> duncan <- duncan.test(model,"GALUR",alpha=0.05)
> duncan
$statistics
MSerror Df Mean CV
29.79306 8 117.9 4.629603

$parameters
test name.t ntr alpha
Duncan GALUR 2 0.05

$duncan
Table CriticalRange
2 3.261182 7.960633

$means
T_M std r Min Max Q25 Q50 Q75
IPB_NULL 114.4 6.973760 5 103.0000 121.3333 113.3333 117.0000 117.3333
IPB_WT 121.4 3.309498 5 117.6667 124.8333 119.0000 120.6667 124.8333

$comparison
NULL

$groups
T_M groups
IPB_WT 121.4 a
IPB_NULL 114.4 a

attr(,"class")
[1] "group"
> model <- lm(PDB~GALUR,data=inur.ipbt13)
> summary.aov(model)
Df Sum Sq Mean Sq F value Pr(>F)
GALUR 1 10.3 10.34 0.118 0.74
Residuals 8 698.9 87.36
> library(agricolae)
> duncan <- duncan.test(model,"GALUR",alpha=0.05)
> duncan
$statistics
MSerror Df Mean CV
87.36111 8 47.05 19.8655

$parameters
test name.t ntr alpha
Duncan GALUR 2 0.05

$duncan
Table CriticalRange
2 3.261182 13.63167

$means
PDB std r Min Max Q25 Q50 Q75
IPB_NULL 46.03333 12.560078 5 30.00000 61.16667 37.66667 46.66667 54.66667
IPB_WT 48.06667 4.119061 5 43.83333 52.66667 44.83333 46.83333 52.16667
$comparison
NULL

$groups
PDB groups
IPB_WT 48.06667 a
IPB_NULL 46.03333 a

attr(,"class")
[1] "group"
> model <- lm(LDB~GALUR,data=inur.ipbt13)
> summary.aov(model)
Df Sum Sq Mean Sq F value Pr(>F)
GALUR 1 0.4914 0.4914 10.83 0.011 *
Residuals 8 0.3631 0.0454
---
Signif. codes: 0 ‘***’ 0.001 ‘**’ 0.01 ‘*’ 0.05 ‘.’ 0.1 ‘ ’ 1
> library(agricolae)
> duncan <- duncan.test(model,"GALUR",alpha=0.05)
> duncan
$statistics
MSerror Df Mean CV
0.04538889 8 2.145 9.932246

$parameters
test name.t ntr alpha
Duncan GALUR 2 0.05

$duncan
Table CriticalRange
2 3.261182 0.3107169

$means
LDB std r Min Max Q25 Q50 Q75
IPB_NULL 1.923333 0.1906130 5 1.65 2.1 1.800000 2.033333 2.033333
IPB_WT 2.366667 0.2333333 5 2.00 2.6 2.333333 2.366667 2.533333

$comparison
NULL

$groups
LDB groups
IPB_WT 2.366667 a
IPB_NULL 1.923333 b

attr(,"class")
[1] "group"
> model <- lm(JINT~GALUR,data=inur.ipbt13)
> summary.aov(model)
Df Sum Sq Mean Sq F value Pr(>F)
GALUR 1 0.025 0.025 1 0.347
Residuals 8 0.200 0.025
> library(agricolae)
> duncan <- duncan.test(model,"GALUR",alpha=0.05)
> duncan
$statistics
MSerror Df Mean CV
0.025 8 5.05 3.130968

$parameters
test name.t ntr alpha
 Duncan GALUR 2 0.05

$duncan
Table CriticalRange
2 3.261182 0.2306004

$means
JINT std r Min Max Q25 Q50 Q75
IPB_NULL 5.1 0.2236068 5 5 5.5 5 5 5
IPB_WT 5.0 0.0000000 5 5 5.0 5 5 5

$comparison
NULL

$groups
JINT groups
IPB_NULL 5.1 a
IPB_WT 5.0 a

attr(,"class")
[1] "group"
> model <- lm(PA~GALUR,data=inur.ipbt13)
> summary.aov(model)
Df Sum Sq Mean Sq F value Pr(>F)
GALUR 1 0 0
Residuals 8 0 0
> model <- lm(JMP~GALUR,data=inur.ipbt13)
> summary.aov(model)
Df Sum Sq Mean Sq F value Pr(>F)
GALUR 1 8.1 8.10 1.045 0.337
Residuals 8 62.0 7.75
> library(agricolae)
> duncan <- duncan.test(model,"GALUR",alpha=0.05)
> duncan
$statistics
MSerror Df Mean CV
7.75 8 6.3 44.18861

$parameters
test name.t ntr alpha
Duncan GALUR 2 0.05

$duncan
Table CriticalRange
2 3.261182 4.060139

$means
JMP std r Min Max Q25 Q50 Q75
IPB_NULL 7.2 3.03315 5 2 10 8 8 8
IPB_WT 5.4 2.50998 5 3 9 3 6 6

$comparison
NULL

$groups
JMP groups
IPB_NULL 7.2 a
IPB_WT 5.4 a

attr(,"class")
[1] "group"
> model <- lm(PM~GALUR,data=inur.ipbt13)
> summary.aov(model)
Df Sum Sq Mean Sq F value Pr(>F)
GALUR 1 23.46 23.460 2.811 0.132
Residuals 8 66.78 8.347
> library(agricolae)
> duncan <- duncan.test(model,"GALUR",alpha=0.05)
> duncan
$statistics
MSerror Df Mean CV
8.347083 8 29.47167 9.803083

$parameters
test name.t ntr alpha
Duncan GALUR 2 0.05

$duncan
Table CriticalRange
2 3.261182 4.21364

$means
PM std r Min Max Q25 Q50 Q75
IPB_NULL 31.00333 3.650731 5 25.35000 35.00000 29.83333 32.33333 32.50000
IPB_WT 27.94000 1.834757 5 25.23333 29.53333 26.90000 28.70000 29.33333

$comparison
NULL

$groups
PM groups
IPB_NULL 31.00333 a
IPB_WT 27.94000 a

attr(,"class")
[1] "group"
> model <- lm(GI~GALUR,data=inur.ipbt13)
> summary.aov(model)
Df Sum Sq Mean Sq F value Pr(>F)
GALUR 1 9010 9010 2.661 0.141
Residuals 8 27086 3386
> library(agricolae)
> duncan <- duncan.test(model,"GALUR",alpha=0.05)
> duncan
$statistics
MSerror Df Mean CV
3385.694 8 162.95 35.70833

$parameters
test name.t ntr alpha
Duncan GALUR 2 0.05

$duncan
Table CriticalRange
2 3.261182 84.86214

$means
GI std r Min Max Q25 Q50 Q75
IPB_NULL 192.9667 63.01746 5 90.5 254.6667 188.6667 199 232.0000
IPB_WT 132.9333 52.91681 5 49.0 186.0000 118.0000 150 161.6667

$comparison
NULL
$groups
GI groups
IPB_NULL 192.9667 a
IPB_WT 132.9333 a

attr(,"class")
[1] "group"
> model <- lm(GH~GALUR,data=inur.ipbt13)
> summary.aov(model)
Df Sum Sq Mean Sq F value Pr(>F)
GALUR 1 9333 9333 8.852 0.0177 *
Residuals 8 8435 1054
---
Signif. codes: 0 ‘***’ 0.001 ‘**’ 0.01 ‘*’ 0.05 ‘.’ 0.1 ‘ ’ 1
> library(agricolae)
> duncan <- duncan.test(model,"GALUR",alpha=0.05)
> duncan
$statistics
MSerror Df Mean CV
1054.347 8 122.9833 26.40253

$parameters
test name.t ntr alpha
Duncan GALUR 2 0.05

$duncan
Table CriticalRange
2 3.261182 47.35675

$means
GH std r Min Max Q25 Q50 Q75
IPB_NULL 92.43333 34.66659 5 43.5 127.6667 74.33333 95.33333 121.3333
IPB_WT 153.53333 30.11515 5 122.0 201.6667 138.33333 146.33333 159.3333

$comparison
NULL

$groups
GH groups
IPB_WT 153.53333 a
IPB_NULL 92.43333 b

attr(,"class")
[1] "group"
> model <- lm(GTOT~GALUR,data=inur.ipbt13)
> summary.aov(model)
Df Sum Sq Mean Sq F value Pr(>F)
GALUR 1 3 3 0 0.983
Residuals 8 48790 6099
> library(agricolae)
> duncan <- duncan.test(model,"GALUR",alpha=0.05)
> duncan
$statistics
MSerror Df Mean CV
6098.722 8 285.9333 27.31207

$parameters
test name.t ntr alpha
Duncan GALUR 2 0.05

$duncan
Table CriticalRange
2 3.261182 113.8963

$means
GTOT std r Min Max Q25 Q50 Q75
IPB_NULL 285.4000 84.98444 5 134.0000 329.0000 310.0000 326.6667 327.3333
IPB_WT 286.4667 70.53431 5 187.3333 363.3333 264.3333 272.0000 345.3333

$comparison
NULL

$groups
GTOT groups
IPB_WT 286.4667 a
IPB_NULL 285.4000 a

attr(,"class")
[1] "group"
> model <- lm(X100_.gram.~GALUR,data=inur.ipbt13)
> summary.aov(model)
Df Sum Sq Mean Sq F value Pr(>F)
GALUR 1 0.3960 0.3960 3.597 0.0945 .
Residuals 8 0.8807 0.1101
---
Signif. codes: 0 ‘***’ 0.001 ‘**’ 0.01 ‘*’ 0.05 ‘.’ 0.1 ‘ ’ 1
> library(agricolae)
> duncan <- duncan.test(model,"GALUR",alpha=0.05)
> duncan
$statistics
MSerror Df Mean CV
0.110085 8 2.949 11.25095

$parameters
test name.t ntr alpha
Duncan GALUR 2 0.05

$duncan
Table CriticalRange
2 3.261182 0.4838984

$means
X100_.gram. std r Min Max Q25 Q50 Q75
IPB_NULL 2.750 0.2040833 5 2.59 3.09 2.60 2.70 2.77
IPB_WT 3.148 0.4225163 5 2.68 3.78 2.86 3.16 3.26

$comparison
NULL

$groups
X100_.gram. groups
IPB_WT 3.148 a
IPB_NULL 2.750 a

attr(,"class")
[1] "group"
> model <- lm(B.R_.gram.~GALUR,data=inur.ipbt13)
> summary.aov(model)
Df Sum Sq Mean Sq F value Pr(>F)
GALUR 1 557.3 557.3 7.436 0.026 *
Residuals 8 599.5 74.9
---
Signif. codes: 0 ‘***’ 0.001 ‘**’ 0.01 ‘*’ 0.05 ‘.’ 0.1 ‘ ’ 1
> library(agricolae)
> duncan <- duncan.test(model,"GALUR",alpha=0.05)
> duncan
$statistics
MSerror Df Mean CV
74.94074 8 19.443 44.52416

$parameters
test name.t ntr alpha
Duncan GALUR 2 0.05

$duncan
Table CriticalRange
2 3.261182 12.62551

$means
B.R_.gram. std r Min Max Q25 Q50 Q75
IPB_NULL 26.908 11.197675 5 7.07 33.69 30.31 30.35 33.12
IPB_WT 11.978 4.949098 5 4.95 17.84 10.69 11.02 15.39

$comparison
NULL

$groups
B.R_.gram. groups
IPB_NULL 26.908 a
IPB_WT 11.978 b

attr(,"class")
[1] "group"
> model <- lm(UB_.Hari.~GALUR,data=inur.ipbt13)
> summary.aov(model)
Df Sum Sq Mean Sq F value Pr(>F)
GALUR 1 4.9 4.90 0.867 0.379
Residuals 8 45.2 5.65
> library(agricolae)
> duncan <- duncan.test(model,"GALUR",alpha=0.05)
> duncan
$statistics
MSerror Df Mean CV
5.65 8 59.3 4.008386

$parameters
test name.t ntr alpha
Duncan GALUR 2 0.05

$duncan
Table CriticalRange
2 3.261182 3.466684

$means
UB_.Hari. std r Min Max Q25 Q50 Q75
IPB_NULL 58.6 1.341641 5 58 61 58 58 58
IPB_WT 60.0 3.082207 5 58 65 58 58 61

$comparison
NULL

$groups
UB_.Hari. groups
IPB_WT 60.0 a
IPB_NULL 58.6 a
attr(,"class")
[1] "group"
> model <- lm(UP_.Hari.~GALUR,data=inur.ipbt13)
> summary.aov(model)
Df Sum Sq Mean Sq F value Pr(>F)
GALUR 1 40 40 2.059e+30 <2e-16 ***
Residuals 8 0 0
---
Signif. codes: 0 ‘***’ 0.001 ‘**’ 0.01 ‘*’ 0.05 ‘.’ 0.1 ‘ ’ 1
> library(agricolae)
> duncan <- duncan.test(model,"GALUR",alpha=0.05)
> duncan
$statistics
MSerror Df Mean CV
1.942964e-29 8 97 4.544234e-15

$parameters
test name.t ntr alpha
Duncan GALUR 2 0.05

$duncan
Table CriticalRange
2 3.261182 6.42869e-15

$means
UP_.Hari. std r Min Max Q25 Q50 Q75
IPB_NULL 95 0 5 95 95 95 95 95
IPB_WT 99 0 5 99 99 99 99 99

$comparison
NULL

$groups
UP_.Hari. groups
IPB_WT 99 a
IPB_NULL 95 b

attr(,"class")
[1] "group"