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Ying-Hui Wang, Lin Fu, Bo Wang, Shu-Feng Li, Zhao Sun, Ying
Luan
PII: S0378-1119(17)30379-7
DOI: doi: 10.1016/j.gene.2017.05.034
Reference: GENE 41934
To appear in: Gene
Received date: 17 October 2016
Revised date: 25 January 2017
Accepted date: 15 May 2017
Please cite this article as: Ying-Hui Wang, Lin Fu, Bo Wang, Shu-Feng Li, Zhao Sun,
Ying Luan , Genetic variants of interleukin-18 are associated with reduced risk of atrial
fibrillation in a population from Northeast China, Gene (2017), doi: 10.1016/
j.gene.2017.05.034
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Genetic variants of interleukin-18 are associated with reduced risk of atrial fibrillation
Ying-Hui Wang1,#, Lin Fu2,#, Bo Wang3, Shu-Feng Li1, Zhao Sun1 and Ying Luan1,*
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Department of Cardiology, The Second Affiliated Hospital of Harbin Medical University,
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Department of Cardiology, Heilongjiang Provincial Hospital, Harbin 150001, Heilongjiang,
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China
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Department of Cardiology, PLA 117 Hospital, Hangzhou 310003, Zhejiang, China.
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These two authors contributed equally to this work.
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*Corresponding author: Ying Luan, Department of Cardiology, The Second Affiliated
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Hospital of Harbin Medical University, 246 Xuefu Street, Nangang District, Harbin 150086,
China. Tel: +86 18645043046; Fax: +86 451 86605677; E-mail: yangl223300@gmail.com
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Abstract
pro-inflammatory cytokine. This study aimed to assess the association of single nucleotide
polymorphisms (SNPs) of IL-18 for with AF risk. Blood samples were taken from 243 AF
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patients and 160 non-AF individuals from a Chinese population and subjected to genotyping
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for six IL-18 SNPs using the MassArray system. Association of individual SNPs with AF risk
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was analyzed using SAS version 9.1. The results showed that the left atrial diameter was
increased and the left ventricular ejection fraction was decreased in AF patients compared to
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controls. IL-18 SNPs were associated with reduced risk of AF even after adjusting for various
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genotype and G allele, and rs549908 GT genotype and G allele were associated with
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decreased risk of AF. In conclusion, our findings indicate that rs187238, rs360719, and
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rs549908 in IL-18 are associated with reduced risk of AF in this cohort of patients.
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1. Introduction
Atrial fibrillation (AF), the most common sustained cardiac arrhythmia, affects
approximately 1-2% of general population [1-3]. In recent years, the incidence of AF has
stagnation in the left atrium or left atrial appendage, which in turn leads to thrombus formation;
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and increases the risk for embolism and stroke. Indeed, AF accounts for up to 24% of all
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ischemic stroke [5]. Moreover, AF causes left atrial enlargement and increases the perimeter of
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the mitral valve, leading to heart failure. Therefore, AF is not only an independent risk factor
for heart failure, but also confers a significant risk of ischemic stroke [6, 7]. To date, the
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defined etiology and pathogenesis of AF remain unclear. Hypertension, heart or lung diseases
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such as coronary artery disease, mitral stenosis, pericarditis, congenital heart disease, lung
promote the development of AF. Recent data demonstrated that atrial intimal macrophage
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activity was increased in AF patients, suggesting the presence of immune and inflammatory
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responses [8]. Inflammation and oxidative stress may promote atrial structural and/or
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electrical remodeling in a manner that promotes the development and maintenance of AF.
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and tumor necrosis factor (TNF) were found to be elevated in atrial tissues [9-14]. IL-18,
by macrophages and monocytes [15]. IL-18 induces the proliferation of activated T cells and
NK cells, which mediate the secretion of several cytokines and chemokines that participate in
innate and acquired immune responses [16, 17]. Luan et al. demonstrated the upregulation of
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IL-18 levels in AF patients and proposed that IL-18 is one of the most relevant predictors of
The human IL-18 gene (IL-18) is localized at chromosome 11q22.2–q22.3 and contains six
exons [19]. Up to now, several single nucleotide polymorphisms (SNPs) have been identified
in IL-18 [20]. Two of these polymorphisms, -607C/A (rs1946518) and -137G/C (rs187238),
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have been shown to modulate IL-18 expression [21, 22]. The functional consequences of
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other IL-18 SNPs, e.g., rs549908, rs7106524, rs360719, and rs543810, remain to be
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determined. IL-18 SNPs are associate with different chronic inflammatory diseases, including
allergic rhinitis [23], bronchial asthma [24-26], and atopic dermatitis [27, 28]. However, no
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studies have examined the association of IL-18 SNPs with AF. Therefore, in this study we
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analyzed the association of IL-18 rs549908, rs7106524, rs543810, rs360719, rs187238 and
rs1946518 SNPs with AF risk using AF patients and controls as the subjects.
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Total 243 AF patients and 160 non-AF individuals were recruited from The Second Affiliated
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Hospital of Harbin Medical University between 2012 and 2014. AF was diagnosed based on
for the management of AF [29]. Control subjects consisted of unrelated individuals who were
confirmed to be free of AF based on ECG or medical records. Individuals with acute coronary
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significant valvular disease, severe left ventricular dysfunction (ejection fraction <30%),
congenital heart disease, secondary hypertension, malignant, hyperthyroidism, and liver and
This study was approved by Ethics Committee of Harbin Medical University and a written
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informed consent was obtained from all participants, in line with the Helsinki declaration,
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before inclusion in the study.
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2.2 Genomic DNA extraction and SNPs selection and genotyping
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Venous blood (5 ml) was withdrawn from AF subjects and controls in a fasting condition.
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Blood samples were collected into an ethylenediaminetetraacetic acid (EDTA) tube and
genomic DNA was extracted from 200 µl of whole peripheral blood using a Genomic DNA
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extraction kit (Thermo Scientific, Waltham, MA, USA) according to the manufacturer’s
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Scientific) with A260/280 ratio and agarose gel electrophoresis/ethidium bromide staining
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We selected two polymorphic sites in IL-18 promoter region [-607C/A (rs1946518) and
-137G/C (rs187238)], which can affect IL-18 expression [21, 22]. Three TagSNPs [minor
allele frequency (MAF) >0.05] were genotyped in the Han Chinese (CHB) population
samples of the HapMap Project (Data Release 27 Phase II+III, Feb09, on NCBI B36
assembly, dbSNP b126), and each at 5'- and 3'- end of 5 kb extension. These SNPs were
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http://www.informer.com/) with pairwise tagging mode and r2 > 0.80. In addition, CHB
population of 1000 genome database MAF > 0.05 functional SNP loci was searched to
All SNPs were genotyped using the MassArray system (Sequenom iPLEXassay, San Diego,
CA, USA). The locus-specific PCR and detection primers (Table 1) were designed using the
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MassARRAY Assay Design 3.0 software. The sample DNA was amplified by a multiplex
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PCR, and PCR products were then used for locus-specific single-base extension reaction. The
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resulting products were desalted and transferred to a 384-element SpectroCHIP array. The
All statistical analyses were performed using SAS version 9.1 (SAS Institute, Inc., Cary, NJ,
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USA). The standard independent samples t-test and the 2 test were used to compare
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genotype distribution of polymorphisms between case and control samples was determined
by the 2 test. Genotypes and allele frequencies were obtained by a direct count and
compared between case and control using the 2 test. The association between risk factors
and AF was assessed using logistic regression analysis, including gender, age, left ventricular
ejection fraction (LVEF), left atrium diameter (LAD), and the status of hypertension,
coronary artery disease (CAD), diabetes and tobacco smoking as the variables. Odds ratio
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(OR) with 95% confidence interval (CI) was determined. p value <0.05 was considered
significant difference.
3. Results
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The characteristics of all participants are shown in Table 2. Compared to controls, AF patients
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exhibited increased left atrial dimension and decreased left ventricular ejection fraction.
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Nevertheless, there was no significant difference between case and control subjects in the age,
gender, and the status of hypertension, coronary heart disease, diabetes mellitus, and tobacco
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smoking.
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3.2 Association of genotypes and allele frequencies of these SNPs with the reduced AF
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risk
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The distribution of IL-18 SNPs was in accordance with the Hardy–Weinberg equilibrium
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between case and control (Table 3). Representative electrophoresis images of PCR
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products (749 bp) for genotyping were shown in Fig. 1. Representative sequencing data
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for IL-18 rs187238 and 1946518 genotypes were shown in Fig. 2 and 3.
The distribution and association of the genotypes and alleles of the six SNPs are shown in
Table 4 and Table 5. Logistic regression analyses revealed that compared to the highest
the AF group compared to controls (adjusted OR = 0.260, 95% CI: 0.115, 0.591, P= 0.0013).
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significantly lower in the AF group than in the control group (adjusted OR = 0.365, 95% CI:
0.175, 0.760, P= 0.0071). Compared with the highest frequency of the rs549908 TT genotype,
GT genotype was significantly lower in the AF group than in the control group (adjusted OR
= 0.400 95% CI: 0.194, 0.822, P= 0.0127). These findings indicate that individuals carrying
these SNPs are at lower risk of AF. Compared to the highest frequency of the rs187238 G
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allele, C allele was significantly lower in the AF group than in the control group (adjusted OR
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= 0.413, 95% CI: 0.211, 0.807, P= 0.0097). Compared to the highest frequency of the
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rs360719 A allele, G allele frequency was significantly lower in the AF group than in the
control group (adjusted OR = 0.473, 95% CI: 0.251, 0.894, P= 0.0211). Compared to the
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highest frequency of the rs549908 T allele, G allele frequency was also significantly lower in
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the AF group than in the control group (adjusted OR =0.506, 95% CI: 0.270, 0.948, P=
genotypes with the allele distributions between the AF patients and control subjects.
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1% using SAS software. We found that the GAATGA haplotype in four haplotypes had the
highest frequency in AF patients and control groups, indicating that the association of these
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that the left atrial diameter was significantly increased in patients harboring rs187238 GC
compared to TT genotype (Table 7). However, there was no statistical difference in other
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characteristics, including the gender, age, hypertension, CAD, diabetes, LVEF, or tobacco
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smoking (Table 7).
4. Discussion
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Recent studies have demonstrated the association between IL-18 and cardiovascular diseases
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[30-32]. However, the association of IL-18 polymorphisms with the risk of AF remains
unclear. In this study we demonstrated that several IL-18 SNPs were associated with reduced
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risk of AF in a cohort of Chinese patients. Some of these IL-18 SNPs were shown to regulate
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IL-18 expression [21, 22]. It will be important to explore the underlying mechanism by which
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It is known that multiple risk factors promote the development of AF. In our study, we
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excluded the patients with acquired diseases or conditions that are known to promote AF.
Using this cohort of case and control individuals, we revealed the association of IL-18 SNPs
with reduced AF risk. As expected, we observed significant change in heart size and function
in AF patients compared to non-AF controls, consistent with previous studies [34, 35].
Interestingly, a previous study showed that there was no association of IL-18 promoter region
rs187238 and rs1946518 SNPs with the risk of AF [33] . Our current data confirmed previous
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findings on rs1946518, but not rs187238. This may be explained by different ethnic groups
between our study and previous study. In addition, the differences in study design, sample
size, sequencing method, and the adjustment of confounding variables may account for the
different results between our study and previous studies. Further large-scale multi-center and
multi-ethnic population based studies are needed to explain the different results.
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The association of three IL-18 SNPs with reduced risk of AF suggests that these SNPs
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could reduce IL-18 expression. It was reported that healthy individual carrying IL-18 promoter
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region allele 137C had a lower level of both spontaneous and lipopolysaccharides-stimulated
IL-18 production [22]. However, it remains to be determined whether these functional IL-18
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SNPs could affect IL-18 expression in peripheral blood mononuclear cells. Therefore, further
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study is needed to investigate whether these IL-18 SNPs play a functional role in the
Several limitations of the current study should be pointed out. First, we could not exclude
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the presence of previous asymptomatic episodes of AF in the control group because these
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individuals were recruited based on medical history and clinical tests (such as ECG) during
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the recruitment process. Second, our sample size is relatively small. Third, our subjects were
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studies with large sample size are necessary to confirm the association of IL-18 SNPs with
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Acknowledgements
We thank the staff at Department of Cardiology, The Second Affiliated Hospital, Harbin
Medical University for recruiting and collecting data. This study was supported in part by a
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Conflict of interest
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The authors declared that there is no conflict of interest.
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Figure legends
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rs187238 genotypes showed that there was only a single G peak in GG genotype, a single
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C peak in CC genotype and an overlaping G and C peaks in GC genotype.
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Figure 3. Sequencing results of IL-18 rs1946518 genotypes. The sequencing data of
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rs1946518 genotypes showed that there was only a single A peak in AA genotype, a
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rs7106524 5'-ACGTTGGATGGAACTCACCACAGATTTGGC-3' 5'-ccccgTGGTGCATGCC
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5'-ACGTTGGATGATTACCTGGGTGTGTTGGTG-3' TGTAGAACTA-3'
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rs543810 5'-ACGTTGGATGTTCAGCTCTTTCCGTCCTTG-3' 5'-TGGAGGCAATTTTG
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5'-ACGTTGGATGTATGAACAGGCAAATGGAGG-3' GAC-3'
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rs360719 5'-ACGTTGGATGGTGCTGCTTCTGATCACTAC-3' 5'-tttctTCCAATTGGGCC
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5'-ACGTTGGATGCACCTTCCAACTGTAGAGTC-3' AATTAAC-3'
5'-ACGTTGGATGGCAGAGGATACGAGTACTTC-3' TTTTCATGAAAT-3'
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HT (n, %) 119 (48.97) 82 (37.50) 0.65
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DM (n, %) 45 (18.52) 28 (11.25) 0.79
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LVEF (%) 59.35 ± 8.94 NU 62.90 ± 6.16 <0.05
Note: AF, atrial fibrillation; LAD, left atrium diameter; LVEF, left ventricular ejection fraction; HT,
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hypertension; DM, diabetes mellitus; CAD, coronary artery disease. Continuous variables were analyzed by
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controls
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Control Real 100 30 3 0.17 0.91
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Prospective 99.44 31.13 2.43
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rs360719 AF Real 200 37 4 2.08 0.35
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The data were analyzed by 2 test.
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CC 5 (2.21) 3 (2.26) 0.86 1.202 (0.144, 10.044)
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rs360719 AA 200 (82.99) 121 (76.58) reference
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AG 37 (15.35) 34 (21.52) 0.0071 0.365 (0.175, 0.760)
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N (%) N (%)
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C 44 (9.73) 36 (13.53) 0.0097 0.413 (0.211, 0.807)
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G 45 (9.34) 40 (12.66) 0.021 0.473 (0.251, 0.894)
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rs543810 A 300 (63.83) 207 (66.35) reference
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G 170 (36.17) 105 (33.65) 0.98 0.997 (0.668, 1.489)
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GAATGG 0.02825 0.03165 0.02268 0.45
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GAGTTG 0.34995 0.36119 0.33248 0.40
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The data were analyzed by 2 test.
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patients
rs187238
Characteristics GG GC CC p valuea
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Gender (M/F) 103/84 24/10 3/2 0.24
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Age (years) 62.81 ± 11.13 61.97 ± 12.17 59.00 ± 14.14 0.71
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Hypertension (n, %) 92 (49.20) 19 (55.88) 1 (20.00) 0.31
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compared to the GG genotype.
rs360719
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Characteristics AA AG GG p valuea
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a
compared to the AA genotype.
rs549908
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Characteristics TT GT GG p valuea
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Genotypes frequencies (n, %) 200 (82.64) 38 (15.70) 4 (1.65)
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Gender (M/F) 114/86 26/12 2/2 0.39
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compared to the TT genotype.
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Continuous variables were analyzed by t-test and categorical variables were analyzed by 2 test.
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Fig. 1
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Fig. 2
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Fig. 3
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Abbreviation list
IL-18, interleukin-18; AF, atrial fibrillation; LAD, left atrium diameter; LVEF, left ventricular
ejection fraction; HT, hypertension; DM, diabetes mellitus; CAD, coronary artery disease.
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Highlights
Genotyping for six IL-18 SNPs in 43 AF patients and 160 non-AF Chinese
Left atrial diameter increased and left ventricular ejection fraction decreased in AF
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patients
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rs187238, rs360719, and rs549908 in IL-18 are associated with reduced risk of AF
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