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Received 26 April 1999; received in revised form 27 July 1999; accepted 27 July 1999
Abstract
An efficient fermentation medium producing a colourless product with high yields has been developed for the production of
recombinant hirudin from Saccharomyces cere6isiae. Response surface methodology was applied to optimize the medium
constituents. A 25-1 fractional factorial central composite design has been chosen to explain the combined effect of the six medium
constituents, viz. yeast extract, peptone, casamino acids, ammonium sulphate, potassium phosphate and galactose, and to design
a minimum number of experiments. The optimized medium produced 65.3 mg/l of r-hirudin in shake flask culture, which is 35%
higher than the unoptimized medium. The colour of the purified product was influenced by the colour intensity of culture
supernatant, which in turn depended upon the concentration of complex substrates used in the medium. The concentration of
yeast extract has been reduced to 16 g/l in the optimized medium than other reported media containing 40 g/l yeast extract. The
colour intensity of culture supernatant obtained by the optimized medium was reduced by 60% from the reported media
containing 40 g/l yeast extract. © 2000 Elsevier Science Ltd. All rights reserved.
0032-9592/00/$ - see front matter © 2000 Elsevier Science Ltd. All rights reserved.
PII: S 0 0 3 2 - 9 5 9 2 ( 9 9 ) 0 0 1 2 9 - 6
640 K.J. Rao et al. / Process Biochemistry 35 (2000) 639–647
upon purification. This problem intensifies further in and 20 g/l dextrose was used for the selection of
scale-up studies, when the industrial grade chemicals transformed cells and for the development of seed
are used for economic reasons. To circumvent this culture. A single yeast transformant on the YNBCAD
problem, it is essential to focus on this aspect from the agar plate was inoculated into 10 ml YNBCAD
laboratory scale onwards by designing a suitable medium and incubated overnight at 30°C. For inocu-
medium that reduces the colour intensity of the culture lum development, the seed culture at 10% (v/v) level
supernatant as well as producing better yields. This will was transferred into an Erlenmeyer flask containing the
help in adopting simple and economical techniques to same medium and incubated for 24 h at 30°C. This
purify the final product with better quality. culture was used as an inoculum at 10% (v/v) level for
The application of statistical experimental design all medium optimization studies.
techniques in fermentation process development can
result in improved product yields, reduced process vari- 2.3. Production medium
ability, closer confirmation of the output response
(product yield or productivity) to nominal and target The unoptimized production medium employed con-
requirements and reduced development time and over- sists of yeast extract 10 g/l; peptone 10 g/l; casamino
all costs. Conventional practice of single factor opti- acids 5 g/l; (NH4)2SO4 10 g/l; K2HPO4 10 g/l and
mization by maintaining other factors involved at an galactose 30 g/l. All substrates used in this study were
unspecified constant level does not depict the combined of laboratory grade. Fermentation was carried out in
effect of all the factors involved. This method is also a the 500-ml shake-flask containing 100 ml of production
time consuming process and requires a number of medium incubated at 30°C with an agitation speed of
experiments to determine optimum levels, which are 200 rev/min.
unreliable. These limitations of a single factor optimiza-
tion process can be eliminated by optimizing all the
affecting parameters collectively by statistical experi- 2.4. Analytical methods
mental design using response surface methodology
(RSM) [9,10]. RSM can be used to evaluate the relative The hirudin activity in the culture supernatant was
significance of several affecting factors even in the determined using thrombin and a chromogenic sub-
presence of complex interactions [11]. strate, chromozyme TH, as described by Sohn et al [12].
This communication reports an attempt to formulate The colour intensity of the culture supernatant was
a suitable production medium that can substantially determined by measuring the absorbance at 580 nm
reduce the colour intensity of the culture supernatant using UV-Visible spectrophotometer (Pharmacia,
and to optimize the same by statistical experimental USA).
design using RSM to improve the yield of r-hirudin
from S. cere6isiae. 2.5. Experimental design and optimization
Table 1
Design matrix of independent variables and their corresponding experimental and predicted yields of r-hirudin
Dsn. id. c Yeast extract Peptone Casamino- (NH4)2SO4 K2HPO4 Galactose Hirudin yield (mg/l)
(g/l) (g/l) acids (g/l) (g/l) (g/l) (g/l)
Experimental Predicted
Table 2
Design matrix of independent variables in coded form
Dsn. Id. c Yeast extract (g/l) Peptone (g/l) Casamino-acids (g/l) H(NH4)2SO4 (g/l) K2HPO4 (g/l) Galactose (g/l)
1 −1 −1 −1 −1 −1 −1
2 +1 −1 −1 −1 −1 0
3 −1 +1 −1 −1 −1 0
4 +1 +1 −1 −1 −1 −1
5 −1 −1 +1 −1 +1 −1
6 +1 −1 +1 −1 +1 0
7 −1 +1 +1 −1 +1 0
8 +1 +1 +1 −1 +1 −1
9 −1 −1 −1 +1 +1 −1
10 +1 −1 −1 +1 +1 0
11 −1 +1 −1 +1 +1 0
12 +1 +1 −1 +1 +1 −1
13 −1 −1 +1 +1 −1 −1
14 +1 −1 +1 +1 −1 0
15 −1 +1 +1 +1 −1 0
16 +1 +1 +1 +1 −1 0
17 0 0 0 0 0 0
18 0 0 0 0 0 0
19 0 0 0 0 0 0
20 0 0 0 0 0 0
21 −1 −1 −1 −1 +1 0
22 +1 −1 −1 −1 +1 −1
23 −1 +1 −1 −1 +1 −1
24 +1 +1 −1 −1 +1 0
25 −1 −1 +1 −1 −1 0
26 +1 −1 +1 −1 −1 −1
27 −1 +1 +1 −1 −1 −1
28 +1 +1 +1 −1 −1 0
29 −1 −1 −1 +1 −1 0
30 +1 −1 −1 +1 −1 −1
31 −1 +1 −1 +1 −1 −1
32 +1 +1 −1 +1 −1 0
33 −1 −1 +1 +1 +1 0
34 +1 −1 +1 +1 +1 −1
35 −1 +1 +1 +1 +1 −1
36 +1 +1 +1 +1 +1 0
37 0 0 0 0 0 0
38 0 0 0 0 0 0
39 0 0 0 0 0 0
40 0 0 0 0 0 0
41 −a 0 0 0 0 0
42 +a 0 0 0 0 0
43 0 −a 0 0 0 0
44 0 +a 0 0 0 0
45 0 0 −a 0 0 0
46 0 0 +a 0 0 0
47 0 0 0 a 0 0
48 0 0 0 +a 0 0
49 0 0 0 0 −a 0
50 0 0 0 0 +a 0
51 0 0 0 0 0 −a
52 0 0 0 0 0 +a
53 0 0 0 0 0 0
54 0 0 0 0 0 0
confidence level of \ 99% validates the model used in the hirudin yields for different values of the test vari-
the present study. ables and to identify the major interactions between the
Isoresponse contour plots (Figs. 1 – 6) were obtained test variables from the circular or elliptical nature of
using the Design Expert. The response surfaces are contour [10]. The coordinates of the central point
inverted paraboloids and they can be used to predict within the highest contour level in each of these figures
644 K.J. Rao et al. / Process Biochemistry 35 (2000) 639–647
Table 3
Analysis of variance (ANOVA) and regression analysis for the production of r-hirudin: optimization of medium constituentsa
Blocks 547.398 2
Model 4804.137 27 177.93098 7.272 0.0001
Error 587.195 24 24.46648
Corrected total 5938.730 53
a
R 2, coefficient of determination =0.9011; R, multiple correlation coefficient =0.949. Root mean square error, RMSE = 4.94636 and corrected
value, CV =14.42%.
will correspond to the optimum concentrations of the The colour intensity of the culture supernatant was
respective components. substantially reduced by 60% using the optimized
The Student t distribution and the corresponding P medium than the medium containing 40 g/l yeast ex-
values, along with the parameter estimate, are given in tract. But this reduction in colour intensity was about
Table 4. The P values were used as a tool to check the
significance of each of the coefficients, which, in turn,
are necessary to understand the pattern of the mutual
interactions between the test variables. The smaller the
magnitude of the P, the more significant is the corre-
sponding coefficient [9]. The parameter estimate and
the corresponding P values (Table 4) suggests that,
among the test variables, yeast-extract and peptone
(PB 0.0001) produce largest effect on r-hirudin produc-
tion, followed by the galactose (PB 0.0075). Both lin-
ear and quadratic relationships between yeast-extract
and r-hirudin yield and that between peptone and
r-hirudin yield are highly significant (P B 1 × 10 − 4 –
9× 10 − 4). (NH4)2SO4, K2HPO4 and galactose also infl-
uences the production of r-hirudin significantly, their
quadratic effect (P B 0.0001) is more pronounced than
the linear effect. Also, the effect of casamino acids is
considerably important, its quadratic effect (PB
0.0221) is more pronounced than the linear effect (PB Fig. 1. Isoresponse contour plot of r-hirudin yield (mg/l): effect of
yeast extract and peptone on r-hirudin production. Other variables
0.2091). These observations can be interpreted as a
are held at zero level.
consequence of a proportional relationship between the
different medium constituents and r-hirudin produc-
tion. The mutual interaction between yeast-extract and
peptone (PB0.1103), yeast-extract and casamino acids
(PB 0.0628), and that between peptone and potassium
phosphate (PB 0.0051) are also important. Other inter-
actions are insignificant.
Maximization of the regression equation (Eq. (2))
was carried out using an iterative procedure [15] to
obtain optimum concentrations of independent vari-
ables (Table 5). By substituting the corresponding
coded concentration levels of the factors into the re-
gression equation, the maximum predictable response
for r-hirudin production was calculated. It was experi-
mentally verified as shown in Table 3. The maximum
production of hirudin obtained using the optimized
medium was 65.3 mg/l, it was in correlation with the
predicted value. After optimization, the production of
r-hirudin was enhanced by 35% (Table 5). These find- Fig. 2. Isoresponse contour plot of r-hirudin yield (mg/l): effect of
ings strongly support the use of response surface model yeast extract and galactose on r-hirudin production. Other variables
for the medium optimization. are held at zero level.
K.J. Rao et al. / Process Biochemistry 35 (2000) 639–647 645
4. Conclusion
Table 4
The least-squares fit and the parameter estimates (significance of regression coefficients)a
a
Standard error is given in parenthesis; standard error of mean =0.67311.
Table 5
Experimental verification of combined effect of optimized medium on the response of r-hirudin
Variables Range studied Levels before Levels after optimization Hirudin yield (mg/l)
(g/l) optimization (g/l)
Coded Uncoded (g/l) Before opti- After optimization
mization
Predicted Experimental
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