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Received: 20 July 2021 Accepted: 5 January 2022
DOI: 10.1111/1365-2664.14130
RESEARCH ARTICLE
1
Department of Ecology, Environment
and Plant Sciences, Stockholm University, Abstract
Stockholm, Sweden
1. Tropical agroforestry systems provide farmers with resources for their liveli-
2
Department of Plant Biology and
Biodiversity Management, Addis Ababa
hoods, but are also well-recognized as refuges for biodiversity. However, the
University, College of Natural and relationship between yield and biodiversity might be negative in these sys-
Computational Sciences, Addis Ababa,
Ethiopia
tems, reflecting a potential trade-off between managing for increased yield or
biodiversity. The potential for synergies will depend partly on the shape of the
Correspondence
Beyene Zewdie
biodiversity–yield relationship, where a concave relationship suggests a faster
Email: beyene.hailu@su.se decline in biodiversity with increasing yields than a linear or convex shape.
Funding information
2. We studied the relationship between biodiversity (plant species richness and
Bolin Centre for Climate Research; composition) and coffee yield along a gradient of management in south-western
Swedish Research Council, Grant/
Award Number: VR2019-0 4493 and
Ethiopia, coffee's native range. We inventoried species richness and community
VR2015-03600 composition of woody plants, herbaceous plants and bryophytes at 60 sites. We
This is an open access article under the terms of the Creative Commons Attribution-NonCommercial License, which permits use, distribution and reproduction
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© 2022 The Authors. Journal of Applied Ecology published by John Wiley & Sons Ltd on behalf of British Ecological Society.
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wileyonlinelibrary.com/journal/jpe J Appl Ecol. 2022;59:1198–1208.
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ZEWDIE et al. 1199
Journal of Applied Ecology
KEYWORDS
agroforestry, biodiversity conservation, biodiversity–yield trade-offs, coffee, management
intensity gradient, south-western Ethiopia, species composition, species richness
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Journal of Applied Ecology ZEWDIE et al.
F I G U R E 2 Study area and plot design. (a) Map of Ethiopia, with the study area in the south-western part marked with a rectangle. (b)
An aerial view of the landscape with the 60 sites colour marked based on their management intensity (i.e. coffee structure index). The full
circles represent sites with less to medium level of management and the triangles represent intensively managed plantations. (c) The layout
of the individual plots, showing the 50 × 50 m plot and the 16 focal coffee shrubs. (d) Canopy cover and (e) site photographs taken along the
gradient of management from left (less intensively managed forest coffee) to right (intensively managed plantations)
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Journal of Applied Ecology ZEWDIE et al.
>1.5 m were identified and recorded as present/absent within the (Schmitt, 2006). The obtained values of the mean over 3 years are
nine central 10 × 10 m quadrats; herbaceous plants, including both in the same range as for example Aerts et al. (2011), but the upper
those on the ground and epiphytic species, were identified and as- end of our range might be an overestimation (especially for single-
sessed as dominant, frequent or rare in the central 30 × 30 m plot; year data).
and bryophytes (mosses and liverworts) were identified and ranked To examine if there are plant species that are associated with
along a categorical scale reflecting abundance (see below) in the sites of low or high coffee yield, we calculated average coffee yield
central 10 × 10 m quadrat. Species of vascular plants that could for each plant species from the subset of sites where that species
not be identified in the field were collected and identified using the was recorded. In this way we got a value of the mean coffee yield
Flora of Ethiopia and Eritrea at the National Herbarium of Ethiopia, associated with each species (see Table S1). Then we classified the
Addis Ababa University (by MW). Bryophytes were collected from sites into two yield categories: low-yielding (≤1,000 kg/ha) and high-
all major substrates and later identified at Stockholm University (by yielding (>1,000 kg/ha) sites. Finally, we calculated the proportion of
KH). See Appendix S1 in supporting information for more details on plant species from the whole species pool that were associated with
how the different species groups were assessed. the low- and high-yielding sites, separately for each plant species
At each of the 60 sites, we recorded (a) coffee density as a count group. We preferred this approach over dividing the yield range into
of coffee shrubs >1.5 m in the central 30 × 30 m plot that could many categories, since the endpoints of the range would be strongly
be hypothesized to reflect a gradient from low intensity with few affected by the mid-domain effect (Colwell & Lees, 2000).
shrubs to highly managed sites with many shrubs; (b) coffee domi-
nance as the proportion of coffee shrubs to all woody shrubs in the
30 × 30 m plot, that might reflect a management intensity gradient 2.4 | Statistical analysis
where farmers remove competing wild shrubs in more managed sties
(see also Shumi et al., 2019); and (c) coffee structure index. The cof- As we were interested in the shape of the relationship between
fee structure index was created based on five attributes measured biodiversity and coffee yield, we ran generalized additive models
on each of the 16 coffee shrubs per site (see Appendix S2 and Figure (GAMs) with species richness (i.e. woody species richness, herba-
S4). This index reflects the variation in coffee shrub architecture that ceous plant species richness, bryophyte species richness and total
results from variation in management and ranges from 1 (coffee with species richness) as response variables and coffee yield (averaged
little or no management) to 3 (intensively managed coffee; see also for the 3 years) as the explanatory variable. As biodiversity–yield
Zewdie et al., 2020 for the details of how this index was created). relationships might be nonlinear (Figure 1), we used GAMs with a
smoothing parameter. In these models, we used a Gaussian distribu-
tion with identity link, and estimated the smoothing parameter with
2.3 | Coffee yield assessment restricted maximum likelihood (REML) using the gam function in the
r package mgcv (Wood, 2018).
We assessed coffee yield on the 16 coffee shrubs in each of the 60 To explore if the species composition of the different plant
sites during the wet season from July to August, when the coffee groups was related to coffee yield, we performed canonical redun-
berries were at the expansion stage towards maturity, for 3 consec- dancy analyses (RDAs) for each of the four species-by-site matri-
utive years (2017–2019). On each shrub, we first visually assessed ces as response variables and average coffee yield as explanatory
the berry-bearing status of each branch and selected three repre- variable using the rda function in the r package vegan (Oksanen
sentative plagiotropic shoots (horizontal, fruit-bearing branches) and et al., 2019). RDA is a direct gradient analysis, meaning that the or-
counted the number of healthy berries (i.e. excluding berries with dination of the species-by-site matrix is constrained by one (in our
signs of coffee berry disease or coffee berry moth attacks). Next, case) or several explanatory variables. As a second step, to assess
we counted the total number of plagiotropic shoots with berries on possible nonlinearity in the species composition–yield relationships,
the shrub and multiplied the mean of the three branches with this we fitted a GAM with the site scores extracted from the RDA models
value to get an estimate of the total number of berries per shrub. To (first RDA axis of each species group) as response variable and aver-
avoid the risk of overestimation of total yield (since the multiplica- age coffee yield as explanatory variable.
tion at the shrub level sometimes yielded unrealistically high values), To determine if the frequency of occurrence of the three plant
we used the median of the estimated berry yield of the 16 coffee species groups (woody species, herbaceous plants and bryophytes)
shrubs (instead of the average). We then multiplied that with the differed between the two yield categories, that is, low- (≤1,000)
density of coffee shrubs per ha, as estimated from the counts in the or high-yielding (>1,000 kg/ha) sites, we performed a Chi-square
30 × 30 m plot, to obtain the number of berries per ha. The total goodness-of-fit test on the frequency distribution of the species
number of berries was converted to clean coffee yield (kg/ha) by as- groups belonging to the two yield categories.
suming an average berry weight of 0.33 g (Schmitt et al., 2010). The To test whether sites with high yield in one year also had a high
average berry weight of 0.33 g was based on the average dry weight yield in other years, we performed Spearman's rank correlation test
of berries collected from different coffee production systems, which between the site level coffee yield data for the 3 consecutive years.
showed little among-system variation and ranged from 0.31 to 0.37 To assess if the biodiversity–yield relationships were consistent
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ZEWDIE et al. 1203
Journal of Applied Ecology
between the 3 years, we ran separate models for each year for both optimum nearly equally distributed, with 47% in the low-yielding and
richness and composition following the same protocol as explained 53% in the high-yielding sites (Figure S2). The frequency distribution
above for average coffee yield. of the occurrences of the three species groups differed between the
Furthermore, we explored the possibility of capturing the yield two yield categories (χ2 = 7.89, df = 2, p = 0.019, Figure S2).
variation among sites with management-related proxies (coffee den-
sity, coffee dominance and coffee structure index). We performed
Pearson's product–moment correlation tests between these proxies 3.3 | Using proxies for yield when analysing
and average coffee yield. For the best proxy, we then ran the same biodiversity–yield relationships
analyses for richness and composition as for the average yield, as
explained above. We implemented all statistical analyses in the r When we ran all models of species richness and species composi-
software v3.6.1 (R Core Team, 2019). tion with the coffee structure index as the explanatory variable, we
obtained the same general results as to when we used average yield
(cf. Figure 3a vs Figure S3b; Figure 4c–d vs Figure S3c–d; Tables S9–
3 | R E S U LT S S11), except that the relationship was linear and not concave for her-
baceous species.
3.1 | The relationship between plant species
richness and coffee yield
4 | D I S C U S S I O N
We found a total of 407 plant species, including 71 woody plant
species, 243 herbaceous plant species and 93 bryophytes in the 60 We took advantage of a unique landscape with a broad coffee man-
coffee sites (Table S1). As expected, the relationship between spe- agement gradient to explore the shape of the biodiversity–yield re-
cies richness of woody plants and coffee yield was negative. The lationship for a number of plant groups. We found that tree species
shape of this negative relationship was concave, with a steep initial richness declined with increasing coffee yield, confirming our first
decline in species richness with increasing yields up to c. 750 kg/ha hypothesis of a negative relationship, while richness of herbaceous
after which it levelled off (R 2 = 0.30, p < 0.001; Figure 3a; Table S2). plants and bryophytes did not decline with increasing yields. Yet,
There were no significant relationships between species richness of the species composition, not only of woody plants but all groups,
herbaceous plants or bryophytes and average coffee yield (p = 0.12 changed along the yield gradient. All significant relationships showed
and p = 0.75 respectively; Figure 3b,c; Table S2). The relationship be- a concave pattern with a sharp initial decline as yield increased and
tween all species richness and coffee yield mirrored the relationship then a levelling off with even higher yields. From a methodologi-
between woody species and coffee yield, but was only marginally cal perspective, we found that yields were not consistent between
significant (R 2 = 0.08, p = 0.06; Figure 3d; Table S2). years but that coffee structure index could well represent yield in
In the two low-yield years (2017 and 2019; see Appendix S3; models of biodiversity–yield trade-offs. The finding of an initial fast
Table S5; Figure S1a), there were significant negative relation- decline in biodiversity values with increasing coffee yield indicates
2
ships between woody species richness and coffee yield (R ≥ 0.05, that the very low-yielding forest sites are driving much of these pat-
p ≤ 0.045; Figure S1b,d; Table S2), but no relationship was detected terns. This fact needs to be acknowledged both in terms of man-
in the year with high yield (2018; p = 0.13; Figure S1c; Table S2). agement implications in the Ethiopian context and when comparing
these results with studies along management gradients in other
parts of the world.
3.2 | The relationship between species
composition and coffee yield
4.1 | Relationships between plant biodiversity
The species composition for all species groups changed significantly components and coffee yield
along the yield gradient (R2 ≥ 0.16, p ≤ 0.013; Figure 4; Tables S3 and S4).
The pattern was similar to species richness of woody plants with a fast Our observations show that there is a strong negative relationship
turnover when yields increased from low to medium levels, but with a between biodiversity and yield with a clear concave shape of the
similar composition in sites with medium and high yield levels (Figure 4). curve. Similar patterns have also been documented for coffee in
Species composition of all species groups changed significantly other coffee-growing regions (Jha et al., 2014; Perfecto et al., 2005)
along the yield gradient in all 3 years, when analysed separately and from cocoa agroforestry systems (Somarriba et al., 2013;
(R 2 ≥ 0.18, p ≤ 0.005; Tables S7 and S8). Steffan-Dewenter et al., 2007), even if the gradients in these stud-
Of the total number of woody species, 69% had their optimum ies might have been less broad. The main reason seems to be that
in the low-yielding sites (≤1000 kg/ha), while among the herbaceous both coffee and cocoa, although being shade-tolerant plants, have
species 59% had their optimum in the low-yielding sites (Figure a higher production under a thinned canopy (Beer et al., 1998;
S2). The different bryophyte species on the other hand had their Somarriba et al., 2013). However, there are some studies showing
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Journal of Applied Ecology ZEWDIE et al.
F I G U R E 3 The relationship between species richness and average coffee yield for (a) woody plants, (b) herbaceous plants, (c) bryophytes
and (d) all species as a function of the average coffee yield (kg/ha) from 60 sites. Regression slopes with 95% confidence interval from a
GAM are shown with solid and dash trend lines for the significant and near-significant relationships respectively (see Table S2)
that it is possible to maximize biodiversity values without much ef- in places where the connectivity to continuous forest is broken
fect on yield (Clough et al., 2011; Jezeer et al., 2019). It is important (Hylander & Nemomissa, 2017).
to point out that our study encompasses a very broad management While the composition of herbs and bryophytes changed—just
gradient, and perhaps the relationship would have been less pro- like woody species richness—in a concave fashion along the yield
nounced if the extreme end of the gradient (coffee growing with lit- gradient, the species richness of herbs and bryophytes did not de-
tle or no management in the forests) would not have been included. cline along the yield gradient. Apparently, there were also many
Our findings revealed that for species richness the negative re- herbaceous and bryophyte species that were favoured by a more
lationship between biodiversity and coffee yield was much stronger open canopy, counterbalancing the decline in the species adapted
for woody species than for herbaceous plants and bryophytes. The to denser shade in the low-yield end of the gradient. Thus, coffee
low-yield end of the gradient is characterized by little management sites with high yield still are rather species rich for these groups
where the rich diversity of woody species is maintained despite a and contribute to biodiversity values in the landscape (Hylander
high density of coffee in the understorey, similar to other landscapes & Nemomissa, 2008, 2009). That different groups can have dif-
in SW Ethiopia (Schmitt et al., 2010). This contrasts with the more ferent sensitivity to intensification has also been shown in some
intensively managed sites, which are characterized by a lower tree other studies. Steffan-Dewenter et al. (2007) demonstrated that
density and diversity. The low yield of coffee under dense cano- plants were more affected than mobile species such as insects in
pies of shade trees is the reason that smallholder farmers gradually a study of conversion from forest to cocoa agroforest in Indonesia
reduce the canopy of shade trees, and not least the mid-canopy and a study in Mexico showed that ants were less affected by in-
trees and shrubs that directly compete with coffee for space (Aerts tensification than butterflies (Perfecto et al., 2003). A subset of our
et al., 2011; Hundera, Aerts, Fontaine, et al., 2013). From a landscape biodiversity values is directly affected by management (e.g. slash-
perspective, the high diversity of woody species in the low-yield end ing, removal of bryophytes from stems, thinning of canopy and re-
of the gradient might be maintained also by landscape processes moval of lianas), in contrast to other biodiversity components, such
such as dispersal of seeds from the surrounding larger forest areas as butterflies and birds, which are always only indirectly affected
(Koelemeijer et al., 2021), suggesting that extinction debts are likely by management.
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ZEWDIE et al. 1205
Journal of Applied Ecology
F I G U R E 4 The relationship between species composition and coffee yield for (a) woody species, (b) herbaceous species, (c) bryophytes
and (d) all species. Ordination scores form an RDA of the respective species group shown as a function of average coffee yield. The scores
should only be compared relative to each other in each graph, illustrating the similarity. Each dot represents an average of 3 years of coffee
yield (kg/ha) for each of the 60 sites. Regression slopes with 95% confidence interval from a GAM are shown with solid trend lines for the
significant relationships (see Table S4)
4.2 | The relationship between biodiversity and average yield (see Appendix S3). The reason why this index seemed
yield for individual years and the search for a proxy to capture relevant aspects of the yield variation might be that the
for yield architecture of the coffee shrub is closely related to the number of
fruit-bearing branches. One could argue that the value of the coffee
While many studies on biodiversity–yield relationships use yield structure index as a proxy for yield is questionable given the large
from a single year, our findings illustrate that single-year data did amount of labour needed to establish it, but as a major advantage,
not consistently reveal the concave relationship between biodiver- it can be recorded within a single survey, and there is no need for
sity and yield. Apparently, some sites have consistently low or high multi-year yield data. However, the easy-to-assess proxies such as
yields, while others display a strong tendency for a biennial patterns, coffee dominance and coffee density can unfortunately not be used
but not necessarily with the same good and bad years. Such variabil- to predict plant biodiversity components in our study system.
ity can be caused by many factors such as stress from heavy bearing
during the previous year (DaMatta et al., 2008) and pest and disease
damage (Cerda et al., 2017), which is outside the scope of this paper 4.3 | Implications for management
to examine. Irrespective of the cause, together these patterns lead
to a changed rank order of productivity between sites in different The concave nonlinear relationships between biodiversity values
years. It is thus not so easy to establish the gradient in yield to be and yield in our data suggest that there is a strong conflict between
used alongside the biodiversity data since it is necessary to have sev- the goals of improved production and biodiversity conservation.
eral years of yield data. Among the management variables that we However, this pattern is due to the very rich biodiversity in sites with
suggested as possible proxies for yield, the coffee structure index little or no management. If both the goals of conservation of biodi-
did well represent the different biodiversity–yield relationships, versity and improving yields are targeted, the most logical solution
even if coffee structure index only explained 30% of the variation in is to plan for different goals at different localities in the landscape,
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1206
Journal of Applied Ecology ZEWDIE et al.
that is, a classical land-sparing approach (Phalan et al., 2011). This acknowledge that sites with shade coffee are generally considered to
can be achieved by strict protection of the forest sites with little or provide a refuge for biodiversity, especially when compared with the
no management, while the management is intensified in the other alternative of deforestation for annual crop production (Buechley
sites to close the yield gap. Besides biodiversity values such as the et al., 2015; Hylander et al., 2013). Moreover, the presence of coffee
diversity of animals (Berecha et al., 2014; Samnegård et al., 2014), in the edges of the larger forest areas seems to protect the interior
plants (Schmitt et al., 2010) and beneficial micro-organisms (Zewdie from deforestation, since the additional economic value from cof-
et al., 2021), these forests also harbour highly valued wild coffee fee outweighs problems from, for example, raiding animals that is a
genetic resources (Aerts et al., 2013). Also, from this perspective, major obstacle associated with farming close to forests. In fact, at
the land-sparing approach should be advocated, whereby the intact altitudes above where coffee can grow, large areas have been con-
forest areas would need a more strict protection for in situ conserva- verted to annual crops, illustrating the positive role that coffee pro-
tion of coffee genetic resources (Aerts et al., 2015), while the other duction can have at the landscape scale (Ango et al., 2020; Hylander
parts of the landscape perhaps can be more intensively managed to et al., 2013). Thus, certification programs at the landscape scale that
improve livelihoods. target both low and highly productive sites could have a potential to
In this paper we have examined biodiversity–y ield relation- enhance the overall biodiversity of the area (Tscharntke et al., 2011,
ships. However, what matters for a smallholder farmer might not 2015). Although there is an inherent conflict between biodiversity
be the yield alone, but the revenue (Mitiku et al., 2018). In our conservation and increasing productivity at the low-yielding end of
landscape, farmers often get a profit from the little managed sites this unique gradient, there are still important arguments that coffee
through periodic harvesting of other resources such as spices, production has a positive implication for biodiversity at a landscape
honey or firewood (Ango et al., 2014), which causes little or no scale. The results from this and other similar studies are important
damage to the system, while using their labour for other tasks to take into account when simultaneously targeting biodiversity
than management to improve coffee yields. From such a perspec- conservation and smallholder farmers' aspirations to improve their
tive, the optimum strategy for a farmer might not be to have the livelihoods.
highest possible yield. That might create an opportunity for having
dual goals also for the forest sites (i.e. land-sharing) instead of the AC K N OW L E D G E M E N T S
classical land sparing, that at a first glance would seem the most The project was supported by the Swedish Research Council (grant
logical (see above). In the light of this, coffee certification with a no. VR2015-03600 to K.H. and VR2019-0 4493 to A.J.M.T.) and the
payment of premium prices might further improve the revenue of Bolin Centre for Climate Research (to A.M.J.T.). The authors thank
farmers and thus be used to promote biodiversity-f riendly coffee all coffee owners, local, regional and federal authorities for research
production (Mitiku et al., 2018; Perfecto et al., 2005). Yet, par- permits and assistants for help in the field: Tijani Ibrahim, Shabu
adoxically, there is a concern that certification of the little man- Jemal and Raya A/Oli. They thank Sven Fransson, Philip Sollman and
aged forest areas could incentivize farmers to slowly intensify and John Spence for help with the identification of certain mosses.
simplify the remaining forests for coffee production (Geeraert
et al., 2019; Gove et al., 2008; Tadesse et al., 2014). While much C O N FL I C T O F I N T E R E S T
of the current conservation effort focuses on sites that are still The authors declare that they have no conflict of interest.
natural, we suggest it may be worthwhile to design conservation
strategies to maintain or enhance biodiversity values also in the AU T H O R S ' C O N T R I B U T I O N S
more intensively managed sites. In agreement with this, we also B.Z., A.J.M.T., S.N. and K.H. conceived and designed the experi-
found that many herbaceous and bryophyte species occurred ment; B.Z., B.A. and M.W. conducted the fieldwork; B.Z. analysed
in the more productive sites. Increasing biodiversity in more in- the data and wrote the first draft, and all authors contributed to the
tensively managed sites could be possible through, for example, final manuscript.
diversifying the shade tree species without much change in the
amount of shade they provide. DATA AVA I L A B I L I T Y S TAT E M E N T
While most studies compared either sites with low to medium Data available via the Dryad Digital Repository https://doi.
management or medium to intensive management, our study is quite org/10.5061/dryad.w0vt4b8t8 (Zewdie et al., 2022).
unique in that we focused on a broad management gradient ranging
from more or less wild forest coffee with little or no management ORCID
to intensively managed plantations. Despite the seemingly strong Beyene Zewdie https://orcid.org/0000-0002-6020-916X
biodiversity–yield trade-offs when comparing sites with low and Ayco J. M. Tack https://orcid.org/0000-0002-3550-1070
medium management, it also highlights that management intensi- Kristoffer Hylander https://orcid.org/0000-0002-1215-2648
fication might have no negative consequences for biodiversity for
sites with intermediate yields. Finally, we emphasize that it is im- REFERENCES
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