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Gene Therapy

https://doi.org/10.1038/s41434-019-0106-3

BRIEF COMMUNICATION

Distinct transduction of muscle tissue in mice after systemic delivery


of AAVpo1 vectors
Warut Tulalamba1,5 Jonas Weinmann2,6 Quang Hong Pham1 Jihad El Andari
● ● ●
2 ●
Thierry VandenDriessche1,3 ●

Marinee K. Chuah1,3 Dirk Grimm 2,4


Received: 21 June 2019 / Revised: 7 September 2019 / Accepted: 27 September 2019


© Springer Nature Limited 2019

Abstract
The human musculature is a promising and pivotal target for human gene therapy, owing to numerous diseases that affect
this tissue and that are often monogenic, making them amenable to treatment and potentially cure on the genetic level.
Particularly attractive would be the possibility to deliver clinically relevant DNA to muscle tissue from a minimally invasive,
intravenous vector delivery. To date, this aim has been approximated by the use of Adeno-associated viruses (AAV) of
different serotypes (rh.74, 8, 9) that are effective, but unfortunately not specific to the muscle and hence not ideal for use in
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patients. Here, we have thus studied the muscle tropism and activity of another AAV serotype, AAVpo1, that was previously
isolated from pigs and found to efficiently transduce muscle following direct intramuscular injection in mice. The new data
reported here substantiate the usefulness of AAVpo1 for muscle gene therapies by showing, for the first time, its ability to
robustly transduce all major muscle tissues, including heart and diaphragm, from peripheral infusion. Importantly, in stark
contrast to AAV9 that forms the basis for ongoing clinical gene therapy trials in the muscle, AAVpo1 is nearly completely
detargeted from the liver, making it a very attractive and potentially safer option.

Introduction
These authors contributed equally: Warut Tulalamba, Jonas
Weinmann, Quang Hong Pham Among the many tissues that are considered as preclinical
* Thierry VandenDriessche or clinical targets for therapeutic gene transfer, the muscu-
thierry.vandendriessche@vub.be lature including skeletal muscle, heart, and diaphragm is
* Marinee K. Chuah one of the most promising and most important, due to its
marinee.chuah@vub.be central role in numerous human diseases. The best-known
* Dirk Grimm example may be Duchenne muscular dystrophy (DMD), a
dirk.grimm@bioquant.uni-heidelberg.de devastating, rare, and hereditary muscle-wasting disorder
that is caused by mutations in the dystrophin gene and
1
Department of Gene Therapy & Regenerative Medicine, Vrije characterized by progressive skeletal muscle deterioration
Universiteit Brussel (VUB), B-1050 Brussels, Belgium
concurrent with pulmonary and cardiac failure. These
2
Department of Infectious Diseases/Virology, BioQuant Center, symptoms result from the loss of the muscle-protective
Heidelberg University Hospital, University of Heidelberg, 69120
function normally played by the dystrophin protein, which
Heidelberg, Germany
3
mechanically links the cytoskeleton and the extracellular
Department of Cardiovascular Sciences, Center for Molecular &
matrix in healthy muscle cells, thus protecting the muscle
Vascular Biology, University of Leuven, 3000 Leuven, Belgium
4
from contraction-induced damage. In the ~1 in 5000 males
German Center for Infection Research (DZIF) and German Center
who lack dystrophin, muscle fibers are damaged and can no
for Cardiovascular Research (DZHK), Partner site Heidelberg,
Heidelberg, Germany longer regenerate, causing early death in the first three
5 decades of life from cardiorespiratory failure.
Present address: Research Division, Faculty of Medicine Siriraj
Hospital, Mahidol University, 10700 Bangkok, Thailand Two other quintessential hereditary muscle disorders that
6 are also caused by single-gene defects, that likewise
Present address: Boehringer Ingelheim Pharma GmbH & Co. KG,
Drug Discovery Sciences, Birkendorfer Straße 65, 88400 provoke significant morbidity and mortality due to skeletal
Biberach an der Riß, Germany muscle, cardiac and/or diaphragm dysfunction, and for
W. Tulalamba et al.

which no effective bona fide cure is available are myo- capsids for their efficiency and specificity in skeletal mus-
tubular myopathy (MTM) and glycogen storage disorder cle, heart, and diaphragm. This includes a series of reports
(GSD) type II (also known as Pompe disease). MTM from the Kobinger and Auricchio labs who have compre-
patients typically exhibit hypotonia, muscle weakness, and hensively studied a collection of capsids which they had
respiratory failure at birth due to the disease's effect on isolated from porcine tissues [25–27]. In the first of these
skeletal muscle and diaphragm, and they typically quickly reports [25], Bello et al. centered on AAVpo1, a close
succumb to the disease even under intensive support, relative of AAVgo.1, and showed that intramuscular
including gastrostomy feeding and mechanical ventilation. injection into the tibialis anterior muscle resulted in rela-
In contrast to MTM, GSD II not only affects skeletal muscle tively robust transduction, comparable with AAV5 that was
and diaphragm but also the heart. In GSD II patients, used as a benchmark. Moreover, following the systemic
glycogen is no longer broken down effectively into glucose, delivery of AAVpo1 via tail vein injection, relatively high
due to a deficiency of the lysosomal enzyme acid vector copy numbers were detected in skeletal muscle,
α-glucosidase and a resulting lysosomal storage defect. albeit functional transduction was not investigated. Further
Similar to MTM, children affected by the most severe form noteworthy is that no neutralization of AAVpo1 was
of GSD II and lacking medical intervention suffer from observed, neither with antisera against a set of other wild-
myopathy with progressive muscle weakness and die within type (wt) AAVs (serotypes 2–8) nor with high doses of up
their first year of life from cardiorespiratory failure. to 12 mg/ml of human immunoglobulins (IVIg). In a 2014
Fortunately, over the last years, new hope has emerged follow-up study [26], the same labs reported similarly
for patients affected by these and other myopathies due to encouraging data with other porcine isolates and showed
the successful implementation and validation of gene that AAVpo2.1, a hybrid created from AAVpo2 and
therapies based on the recombinant Adeno-associated virus AAVpo6, also preferentially targets the skeletal muscle
(AAV) vectors including through their systemic delivery (next to kidney and spleen) following the peripheral deliv-
[1]. In fact, for MTM patients, muscle-directed gene therapy ery. Again, however, this was only detected on the level of
using AAV is currently the only clinically relevant option. vector DNA copy numbers, whereas functional transduction
The most notable AAV variant that has shown great pro- data were absent. Moreover, AAVpo2.1 as well as three
mise in preclinical and clinical evaluation is serotype 9 other porcine variants (po4 to po6) robustly transduced the
(AAV9) due to its high efficiency in skeletal muscle, dia- skeletal muscle after direct injection, akin to AAVpo1 in
phragm, and heart, as extensively demonstrated by e.g., the the original report [25], and all except for AAVpo6 were
Müller lab [2, 3], the Duan lab [4, 5], and many others largely resistant to IVIg neutralization [26].
[6–8]. AAV9 was also among the lead candidates in a next-
generation sequencing-based, high-throughput screen of
distinct AAV capsids variants in adult mice recently Results and discussion
performed in our lab (Weinmann et al. manuscript in pre-
paration). Notably, AAV9 is likewise the preferred capsid in Analysis of in vivo luciferase expression reveals
several clinical trials in DMD patients including those a unique biodistribution pattern of systemically
conducted by the companies Solid Biosciences and Pfizer, delivered AAVpo1
and it is the lead for Exonics Therapeutics who harnesses
AAV9 as a carrier for the CRISPR machinery, to induce To analyze the expression pattern of AAVpo1 in adult
therapeutic exon skipping in mutated dystrophin genes CB17-SCID mice following the systemic delivery via tail
[9–11]. Others focus on alternative serotypes, including vein injection, we produced vectors encoding the Luc2
Sarepta Therapeutics (AAVrh.74) or Audentes Therapeutics firefly luciferase reporter under the muscle-tropic, intron-
(AAV8), which were shown to be effective in animal containing SPc5-12 promoter (Fig. 1a). For direct compar-
models of MTM [12–14]. However, the high vector doses ison with the current gold standard in systemic muscle
used may be hazardous owing to possible immunotoxicity transduction, wt AAV9, the latter was produced and
in humans, especially after gene transfer in the liver that analyzed in parallel. Per vector and mouse, 4 × 1010
also occurs with these promiscuous viral isolates [8, 15–20]. recombinant AAVpo1 or AAV9 particles were delivered via
Similarly, muscle-directed gene therapy approaches using intravenous injection (corresponding to roughly 1.6 × 1012
AAV were assessed for treatment of GSD II in preclinical particles per kilogram), and two as well as 4 weeks later,
models, but again required high vector doses to achieve whole-body images of luciferase expression were acquired.
wide-spread muscle transduction [21–24]. Finally, the animals were sacrificed another week later (i.e.,
In efforts to solve the problems with the current gen- 5 weeks after the initial AAV injection) and all major
eration of AAV vectors for muscle gene therapy, others and organs were removed for an additional ex vivo quantifica-
we have started to assess alternative serotypes or synthetic tion of luciferase levels (workflow in Fig. 1b).
Distinct transduction of muscle tissue in mice after systemic delivery of AAVpo1 vectors

A Quantitative ex vivo comparison of reporter gene


expression confirms liver detargeting of AAVpo1
SPc5-12 pA
luc2 rep 2 cap 9 For further and more quantitative validation, we deter-
ITR intron ITR cap po1 mined luciferase expression as photons per second and
square centimeter of tissue (ph/s/cm2/sr) in all samples
(Fig. 3). Indeed, this confirmed our conclusions from the
B visual inspection of the whole mice (Fig. 2a) or the iso-
lated tissues (Fig. 2b), by showing that AAVpo1 had
robustly transduced all tissues albeit at a twofold to
9 po1 threefold lower level as compared with AAV9. Impor-
tantly, congruent with the images in Fig. 2b, luciferase
expression in the liver was entirely undetectable in the
2w 2w 1w
AAVpo1-treated mice, where we detected <1000 ph/s/
cm2/sr (averaged 888.6 ph/s/cm2/sr) similar to the PBS-
imaging: in vivo in vivo ex vivo treated mice (averaged 642.7 ph/s/cm2/sr). This is in stark
contrast to the AAV9 cohort where we consistently
Fig. 1 Constructs and workflow for analysis of AAVpo1 and AAV9 measured around 20,000 ph/s/cm2/sr.
vectors. a (left) AAV vector construct expressing a firefly luciferase
reporter (Luc2) from a muscle-tropic SPc5-12 promoter. ITR inverted
terminal repeat, pA synthetic polyadenylation site. (right) AAV helper Quantification on the DNA and RNA levels validates
constructs co-encoding rep of AAV2 together with cap of either the unique biodistribution of AAVpo1
AAV9 (benchmark) or AAVpo1. b Experimental workflow. Mice
were injected with one of the two vectors, followed by the whole-body
imaging of luciferase expression after 2 or 4 weeks and their sacrifice The aforementioned data had revealed the ability of
after a total of 5 weeks for organ harvesting and ex vivo luciferase AAVpo1 to functionally transduce all muscle tissues from
measurements. This figure contains clipart from Servier Medical Art peripheral delivery, in the absence of detectable transgene
(https://smart.servier.com/) expression in the liver. To our knowledge, this exclusive
pattern of AAVpo1's bioactivity has not been reported
As shown in Fig. 2a, we observed an expected increase before, and it distinguishes this AAV serotype from all
in luciferase expression from week 2 to 4 for both vectors, other isolates that have previously been evaluated in the
in line with the known in vivo kinetics of conventional, muscle. To assess whether this unique biodistribution
single-stranded AAV vectors [28]. Intriguingly, visual profile was also reflected on the level of the vector DNA,
inspection of the whole-body images implied fundamental we measured AAV genome copy numbers in the same
differences in the biodistribution of the two capsid variants. tissues. As is evident from Fig. 4a, the results indeed
Firstly, luciferase expression was slightly reduced overall in mirror the protein expression data in Figs. 2 and 3. In most
the AAVpo1 cohort as compared with the AAV9 standard. tissues, AAVpo1 copy numbers were within a twofold to
Secondly, and more notably, we detected a significant threefold range of those of AAV9, with the most notable
decrease of luciferase signals in the abdominal region exception of the liver where AAVpo1 DNA was >100-
(in particular the area where the liver resides) in mice fold less abundant than that of AAV9. This striking
treated with the AAVpo1 vector relative to the whole body AAVpo1 detargeting from the liver that we consistently
of the same mice as compared with the AAV9 group. This observed on the protein and DNA level is even more
indicated that, following intravenous delivery, the AAVpo1 apparent in a direct side-by-side comparison of vector
capsid is capable to detarget vector gene expression from biodistribution in all eight tissues that we studied here. As
the liver. seen in Fig. 4b, this shows a highly similar profile for both
This was indeed confirmed upon comprehensive ex vivo capsids except for the liver, which is clearly the pre-
measurements of luciferase expression in individual organs dominant target for AAV9 but inconspicuous in the case
including various muscle types, i.e., diaphragm, quadriceps, of AAVpo1.
gastrocnemius, tibialis, biceps, triceps, heart, and liver. In addition, quantitative real-time (qRT-)PCR was per-
Most strikingly, while all muscle tissues were robustly formed to confirm the luciferase expression profile by
transduced with both vectors (Fig. 2b), luciferase expression measuring the levels of Luc2 mRNA in major organs of the
was also prominently detected in the livers of the AAV9 AAV-injected mice (Fig. 5a). The results show that the
cohort (where it was even stronger than in the diaphragm) expression level of Luc2 mRNA from the AAVpo1 was
but at background level in the AAVpo1-transduced animals, only about twofold to threefold reduced as compared
akin to the PBS control group. with AAV9 in the targeted muscle tissues (diaphragm,
W. Tulalamba et al.

A AAV9 AAVpo1 PBS

Week 2

Week 4

B AAV9 AAVpo1 PBS

Diaphragm

Quadriceps

Gastrocnemius

Tibialis

Biceps

Triceps

Heart

Liver

Kidneys

Spleen

Lungs

Brain

Fig. 2 Whole-body and tissue imaging of AAV9- or AAVpo1-injected PBS, exemplifying the lack of any luciferase signal (also at week 4,
mice. a Whole-body images of luciferase expression in mice injected not shown). b Images of luciferase expression in the shown organs
intravenously with the shown vectors, taken at 2 or 4 weeks after from the same mice in a, harvested 5 weeks after AAV injection
injection. Shown on the right are three control mice injected with (see Fig. 1b)

quadriceps, gastrocnemius, tibialis, biceps, triceps, and tissues between the AAV9- or AAVpo1-treated groups.
heart) (Fig. 5a). On the other hand, the expression levels of This is consistent with a comparable expression efficiency
Luc2 mRNA in the livers of AAVpo1-treated mice were of the Luc2 mRNA from the same SPc5-12 promoter-driven
substantially reduced (>100-fold reduction) in comparison construct, regardless of the viral vector capsid used. Hence,
with AAV9 (Fig. 5a), confirming the liver-detargeted the differences in expression levels of the Luc2 reporter
AAVpo1 transduction profile shown in Fig. 4 above. gene and in the biodistribution of AAVpo1 versus AAV9
Lastly, the ratios of Luc2 mRNA and DNA copy num- reflect differences in gene transfer per se due to the unique
bers were calculated. Similar values were detected within all properties of the AAVpo1 capsid.
Distinct transduction of muscle tissue in mice after systemic delivery of AAVpo1 vectors

Fig. 3 Quantification of luciferase protein expression as photon signals Statistical analyses were performed using Mann–Whitney U-test. *p <
in the organs from Fig. 2. Shown data are mean ± s.e.m. n = 5 0.05, **p < 0.01, ***p < 0.001, ****p < 0.0001. ns nonsignificant
for treated/injected group, and n = 3 for PBS/noninjected group.

Conclusion reported here now close these seminal gaps, by illustrating


strong transgene expression in all major muscle types,
The three previous reports [25–27] that have studied including the diaphragm, following peripheral AAVpo1
porcine-derived AAV isolates in mice have implied their vector infusion, to levels that are within a twofold to
potential for muscle-directed gene therapy of diseases, such threefold range of what can be achieved with AAV9 that
as DMD, MTM, or GSD II, by showing (i) robust trans- often serves as the gold standard for muscle-directed gene
duction of skeletal muscle after direct intramuscular therapies.
AAVpo1 injection, (ii) detection of AAVpo1 vector DNA Most notably, in contrast to AAV9, we found that
in skeletal muscle and heart following intravenous delivery, AAVpo1 is markedly detargeted from the liver at the pro-
and (iii) little to no neutralization of AAVpo1 vectors by tein and DNA levels. This liver detargeting likely results
IVIg or anti-AAV sera. However, neither of these reported from the combination of the inherent tissue/cell specificity
studies has assessed actual transgene expression in muscle of this AAV variant and the use of a muscle-tropic promoter
tissues following intravenous AAVpo1 vector delivery nor (i.e., SPc5-12 [29–31]) in our study. Conversely, significant
has the diaphragm been included in prior work. The data levels of transgene expression were detected in the liver
W. Tulalamba et al.

Fig. 4 Quantification of AAV vector DNA copy numbers in a subset eight studied organs. Shown data are mean ± s.e.m. n = 5 for treated/
of the organs from Fig. 2. a Direct comparison of AAV9 versus injected group, and n = 3 for PBS/noninjected group. Statistical
AAVpo1 vector copy numbers in eight different organs. b Compila- analyses were performed using Mann–Whitney U-test. **p < 0.01,
tion of all copy numbers for AAV9 or AAVpo1, respectively, in the ****p < 0.0001. ns nonsignificant

with this promoter in the context of AAV9 but not with AAV vectors of different serotypes (e.g., AAV2, AAV5,
AAVpo1. This highlights the unrestricted tropism of the AAV8, and AAV9) in the context of different clinical trials
AAV9 serotype and its substantial activity in tissues outside [15, 32–36]. At high vector doses, this untoward liver
the muscle, which has important implications for its future transduction and concomitant inflammation even resulted in
use in muscle-directed gene therapy trials and its develop- grade 4 toxicity consistent with an >30-fold increase in liver
ment as a therapeutic product. In particular, the significant transaminases [35], warranting the use of transient immune
liver detargeting obtained with AAVpo1 may minimize the suppression with corticosteroids.
risk of vector dose-dependent hepatotoxicity, which was a Finally, we note again that other porcine AAV variants,
common adverse event associated with systemic delivery of AAVpo2.1, po4, po5, and po6, have previously been
Distinct transduction of muscle tissue in mice after systemic delivery of AAVpo1 vectors

Fig. 5 Expression analysis of Luc2 mRNA from each organ of AAV9- copies within the same organs. Shown data are mean ± s.e.m. n = 5
and AAVpo1-treated mice. a Luc2 mRNA expression as measured by for treated/injected group, and n = 3 for PBS/noninjected group.
quantitative real-time (qRT-)PCR. Luc2 expression levels were nor- Statistical analyses were performed using Mann–Whitney U-test. *p <
malized to endogenous mGapdh mRNA. b Transcription efficiency of 0.05, ****p < 0.0001. ns nonsignificant
Luc2 vectors. Levels of Luc2 mRNA were normalized to Luc2 DNA
W. Tulalamba et al.

reported to perform well in the mouse muscle following overlay onto a gray-scale animal image using a multicolor
direct intramuscular injection and that one of them, scale. No animals were excluded from the analysis, and the
AAVpo2.1, was also detargeted from the liver after per- investigator was not blinded during analysis.
ipheral administration, at least on the vector DNA level
[26]. Combined with the new data reported here and the low Transduction efficiency, biodistribution, and mRNA
reactivity of all tested porcine AAV capsids with IVIg or levels
antisera [25, 26], this implies a great potential of this clade
of AAV variants and supports their further characterization Transduction efficiency and biodistribution were evaluated by
and development as vectors for muscle-directed gene quantifying Luc2 transgene copy numbers in the different
therapies, including their molecular evolution [37, 38] via organs and tissues. Genomic DNA and total RNA were
techniques, such as DNA family shuffling [39, 40] or extracted from different tissues of mice injected with the
ancestral reconstruction [41]. More generally, it showcases various AAV vectors using a Qiagen AllPrep DNA/RNA
the vastly unexplored potential of AAV variants other than purification kit (Qiagen, Germantown, MD, USA). Subse-
the "mainstream" serotypes and motivates the further quently, 100 ng of total RNA from each sample was subjected
exploration of these and other parvoviruses as vectors for to reverse transcription using a SuperScript IV cDNA
human gene therapy, including bocaviruses that we have synthesis kit (Thermo Fisher Scientific, Waltham, MA, USA).
recently identified as another very promising vector for gene Next, a cDNA amount corresponding to 100 ng of total RNA
transfer into primary skeletal muscle cells [42]. was amplified by qPCR on an ABI 7700 (Applied Biosys-
tems, Foster City, CA, USA). To quantify Luc2 mRNA levels
in different tissues, RT qPCR analysis was performed using
Materials and methods Luc2-specific primers F 5′-CCCACCGTCGTATTCGTGAG-
3′ and R 5′-TCAGGGCGATGGTTTTGTCCC-3′, yielding a
AAV production 206 bp amplicon. Luc2 levels were normalized to mRNA
levels of the endogenous murine glyceraldehyde-3-phosphate
The AAV helper constructs used for the production of dehydrogenase (mGapdh) gene, using primers F 5′-TGTG
AAVpo1- or AAV9-based vectors and co-expressing rep of TCCGTCGTGGATCTGA-3′ and R 5′-GCCTGCTTCACC
AAV2 together with the selected cap cDNA have recently ACCTTCTTGA-3′, yielding an 82 bp amplicon. Genomic
been reported by us [40]. Likewise, we have recently DNA (100 ng) from each sample was subjected to qPCR,
described the SPc5-12 promoter-driven luciferase construct using the Luc2-specific primers as mentioned above. The
that was packaged into the two capsids, as well as asso- qPCR results were expressed as mean AAV copy number per
ciated protocols for AAV production, purification, and 100 ng of genomic DNA. Known copy numbers (102–107) of
titration [31]. the corresponding plasmid were serially diluted and used to
generate the standard curve.
In vivo bioluminescence analysis
Statistics
Bioluminescence imaging was performed for in vivo luci-
ferase expression. Four-week-old CB17/IcrTac/Prkdcscid Data were analyzed using Graphpad Prism 6.0. Values
male mice were intravenously injected with purified AAV9 shown in the figures are the mean + s.e.m. Statistical
or AAVpo1 capsids expressing Luc2 as reporter gene under significances were calculated by Mann–Whitney U-test
the SPc5-12 promoter (4 × 1010 vector genomes per mouse). analysis.
Mice were randomly assigned to the experimental groups,
and the number of mice in each group was estimated based Acknowledgements WT, QHP, JEA, TV, MKC, and DG are very
grateful for funding and other support from the MYOCURE project.
on post hoc power analysis. At 2 and 4 weeks post injection, MYOCURE has received funding from the European Union’s Horizon
the mice were subjected to bioluminescence imaging ana- 2020 research and innovation program under grant agreement no.
lysis using an in vivo optical imaging system (Photo- 667751. DG is thankful for support by the German Center for Infection
nImager, Biospace Lab, Paris, France). Prior to imaging, Research (DZIF, BMBF; TTU-HIV 04.803 and TTU-HIV 04.815).
DG acknowledges additional funding by the German Research
mice were intravenously administered with a D-Luciferin
Foundation (DFG) through the Cluster of Excellence CellNetworks
substrate in normal saline (30 mg/ml) at a dose of 150 mg/kg (EXC81) and the Collaborative Research Centers SFB1129 (Pro-
of body weight. Quantitative image analysis of individual jektnummer 240245660) and TRR179 (Projektnummer 272983813).
organs was performed at 5 weeks post vector injection. Mice TV and MKC obtained funding from the Fonds Wetenschappelijk
Onderzoek (FWO), VUB Industrieel Onderzoeksfonds (IOF), Koning
were euthanized by cervical dislocation within 1 min post
Boudewijn Stichting (Creemers-Opdebeek) and Association Belge
D-Luciferin administration. In vivo bioluminescence was contre les Maladies Neuromusculaires (ABMM). We are grateful to
expressed in ph/s/cm2/sr and displayed as a pseudo-colored Alexander Bello and Gary Kobinger for initially supplying the
Distinct transduction of muscle tissue in mice after systemic delivery of AAVpo1 vectors

po1 sequence. The authors thank Julia Fakhiri for critical reading of Sci Transl Med. 2017;9:eaan8081. https://doi.org/10.1126/scitra
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2017;56:943–53.
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