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Biological Assays - Their Role in The Development and Quality Control of Recombinant Biological Medicinal Products
Biological Assays - Their Role in The Development and Quality Control of Recombinant Biological Medicinal Products
Data Provided/Inferred
HPLC:
Size exclusion +++ − − ++ +++ +++ −
Ion exchange − ++++++ +++ − + +++ −
Hydrophobic interaction + + +++ ++ ++ +++ −
Reverse phase HPLC + + ++++ ++ − ++++ −
Circular dichroism − − − ++++ +++ ++ −
MNR + − ++++ ++++++ − ++ −
Mass Spectrometry ++++++ + ++++++ − − ++++ −
SDS gel electrophoresis:
A. R. Mire-Sluis et al .
effective constituent in a biological product, i.e. to Attempts to avoid the requirement for live
determine its biological potency. This contrasts animals testing has led to the production of many
with binding assays such as immunoassays and different formats for the in-vitro estimation of
receptor-ligand methods that do not measure the biological potency for a wide range of biological
ability of a protein to induce a biological response. products (Table 2). The use of cells derived from
The most appropriate method for assessing biologi- blood, bone marrow or tissues allows for many
cal potency is to compare the biological activity of individual estimates of potency with less effort in
a sample to that of a well characterised potency comparison to that required to provide a statisti-
reference standard. Where possible, it is preferable cally valid potency for in-vivo tests. However, cells
to use a response that reflects the biological role derived in this manner are still prone to donor
of the material,26,30,31 although it is not necessary to variation and often require careful preparation
attempt to mimic therapeutic activity for a test that procedures. The development of continuously grow-
is used to assess quality or efficacy. ing cell lines36 has greatly reduced experimental
Such procedures can be carried out in vivo variation because cell lines are single clones of cells
or in vitro. The choice of bioassay depends upon that are available in large numbers suitable for
the nature of biological material available for multiple estimates of potency. Also, they do not
in vitro tests and whether the biological activity require the extensive purification needed for cells
of the biological is only measurable in whole derived directly from in-vivo sources.
animals (Table 2).32–39 It is desirable to develop Although cell line-based bioassays have distinct
in vitro biological tests where possible because advantages over other biological assays they are
they offer distinct advantages over using live prone to problems that need addressing before
animals. reliable estimates of the levels of any biological
Live animal experiments suffer from the major can be derived. The major problem associated with
problem of animal-to-animal variation. In order such cell lines is that they are not specific (e.g.
for an in vivo assay to provide valid estimates of for a single cytokine36,40). The use of murine lines
biological potency, a large number of animals are increases specificity in some cases as they may not
required to account for this variation. A great deal respond to proteins that are species restricted in
of care and expense is required to decrease any their activity.
variation through breeding, housing and feeding The recent development of receptor-transduced
of animals. A balance must also be maintained cell lines has produced several more specific cell
between the large number of animals that could lines, but careful maintenance of such lines is
be used to provide several data points for potency required as the expression of the transduced
estimates and humane, ethical and economic receptor is rarely stable and can be lost during
pressures to reduce the use of laboratory animals for passage. However, even these lines can still respond
assays. to other proteins. It is difficult to find a parent line
It can be argued that testing in vivo provides that does not respond in one way or another to more
biological potency tests more relevant to the than one biological substance; those that do not
clinical use of biologicals because a ‘‘whole body’’ respond may not have the biochemical pathways
approach takes into account bioavailability, serum necessary to induce biological responsiveness.
half life, toxicities etc. However, this argument is Normally, specificity is not a problem for
incorrect because biological assays are not intended purified rDNA-derived products. However, should
to mimic the biological activity of a product in confirmation of specificity be required, a simple
the clinical situation. Bioassays used for quality solution is to include a specific neutralizing
can illustrate the batch-to-batch consistency of antibody to the protein under investigation with
biological potency of a product as well as defining any test sample and compare the response as
the actual potency of each lot of product. measured in the bioassay of the sample incubated
The amount of product required to provide the with and without antibody. The difference in
optimal therapeutic biological activity in humans— response should be due to the protein to which
the therapeutic dose—is determined by clinical the antibody has been raised and highlights the
trials. This issue is extremely important as the response induced by that molecule from any others
biological potency measured for quality purposes contained in the sample.40
and therapeutic dose are very often linked invalidly Continuously growing cell lines can change their
as they are two totally different issues. responsiveness if cultured for long periods and
Biological assays: role and development 355
cpm
performance of bioassays and should be carefully 18 000
screened prior to use. Some batches of sera can 16 000
provide excellent maintenance of cell lines (i.e. cells
grow rapidly), but result in poor bioassays with high 14 000
backgrounds or low stimulation indices. Screening 12 000
of sera should include both performance in cell
maintenance and in bioassays. 10 000
8000
The design and analysis of cell-based in-vitro 6000
bioassays
4000
The assessment of the quality and stability of a
product relies on the use of accurate and reliable 2000
test procedures. Of all the tests available for the 0
analysis of biological products, the bioassay is often 10 100 1000 10 000 100 000
the most variable since it requires the use of live [Sample] (reciprocal dilution)
materials (either animals or cell lines). All analyti- Figure 1. An illustration of a parallel line bioassay. An
cal procedures require validation if they are to be of example of a parallel line bioassay where an unknown
a suitable reliability and particular attention must sample (w) is titrated through a dilution series and
be paid to the validation of bioassays due to their compared to the dilution series of a reference standard
(W). The biological readout of the assay is shown as the
inherent variability. amount of radiolabelled thymidine incorporated into the
The design of a bioassay is not straight forward DNA of a proliferating cell line and ilustrated as counts
since many factors can affect the outcome of the per minute cpm. The more dilute the sample, the less
assay. Bioassay results depend inter alia on the proliferation is induced and this results in lower cpm.
sample, the reference standard used, the various
reagents, the design and conduct of the assay
procedure and the numerial analysis of the data.41–52 the bioassay. Timing of feeding, cell numbers and
Therefore, during the design of bioassays, efforts materials used should all be kept consistent. One
must be made to insure that the bioassay includes, should also attempt, during incubations for both
as far as possible, conditions that test assay validity. cell maintenance and bioassay, to ensure a stable
environment of temperature, humidity and CO2/O2.
Design of bioassays Fluctuations due to the opening and closing of
There are several approaches that can be adopted incubators must be avoided and it is recommended
to reduce the variation inherent to bioassays. that separate incubators are used for cell mainten-
The same principles required to reduce animal- ance and bioassay. Incubators specifically designed
to-animal variation apply to in-vitro cell-based to reduce variation in internal environment should
bioassays, where the growth media, culture con- be used.
ditions and execution of the assay must all be Before a bioassay is carried out, it is vital that the
carefully controlled. It is extremely important to equipment used to execute the assay, such as liquid
reduce variation in a bioassay by carrying out pipettors, is correctly calibrated—preferably prior
strict maintenance regimes for the cells used in to each assay.
356 A. R. Mire-Sluis et al .
Of the various formats available for in-vitro units. The optimal assay range is often chosen in
bioassay, formats based on a 96-well microtitre plate a linear (or linear under suitable transformation)
are rapidly becoming the most popular. Concomit- part of the log dose–response relation. In such
tant with this is the development of equipment a situation, the condition of similarity becomes a
designed specifically for the automation of micro- condition that the log dose–response line for the
titre plate based bioassays. However, the wide- sample should be parallel to that for the reference
spread use of microtitre plates for in-vitro bioassays standard, i.e. a parallel line assay (Fig. 1). Provided
requires certain care in the layout of the plate. at least three or ideally more doses of each
For instance, it has been shown that the wells on preparation are included in the assay, the con-
the edges of microtitre plates are subject to greater ditions of linearity and parallelism of the log
variation than internal wells. It is therefore dose–response lines can be tested in the individual
recommended that the outer wells of microtitre assay. Moreover, the slope of the line or other
plates are not used for estimates of biological characteristics of the responses may also provide
potency, but must be treated in a similar manner information about conformity or otherwise with
to the rest of the plate, but without inclusion of the previously determined complete dose–response
cells. The inclusion of coded duplicates during assay relation.
design must be paralleled in practice with several Various assumptions about the statistical nature
internal duplicates included in the assay. of the assay response data must be satisfied if
Although internal plate variations are difficult estimates derived from such analyses, and the tests
to avoid, it is possible to design the layout of for the conditions of linearity and parallelism
successive plates within an assay to minimise such given by such analysis, are to be valid. These
effects. Randomization of sample position appears to criteria must be experimentally determined and the
be the most efficient method to achieve this. If bioassay design amended to take into account how
samples are rotated on successive plates, as well as such ‘‘variations’’ might affect the bioassay results.
shifting the order of neighbouring samples, many Although it may not be possible to exhaustively test
plate effects can be minimized. these assumptions about the nature of the response
The basic format of all biological assays involves data within individual assays, each assay should
the comparison of an unknown sample to a reference include appropriate replication to permit at least
preparation. The most appropriate format to carry some testing.
this out is by creating a dilution series of each First, one must assume that the ‘‘experimental
preparation. The use of single-point assays is units’’ providing the response represent a random
not suitable due to the lack of information they selection from a defined population of such units. In
provide about the performance of the bioassay and microtitre plates for example, the response unit is
samples. A dilution series will result in a standard often a set of triplicate wells. It must be assumed
dose–response curve of the reference preparation to that any three wells positioned anywhere on the
which the dose–response curve of an unknown plate (or between different plates) are identical in
preparation can be compared (Fig. 1). A great deal nature. However, exceptionally careful definition is
of information about the validity of the bioassay can required both for the ‘‘units’’ which are responding
be derived from the statistical evaluation of a and for the ‘‘treatment’’ which they are receiving.
comparison between these dose response curves. In microtitre plates the position of the well is
critical in the definition of the unit. Wells in some
Validating bioassays rows or columns may be consistently different from
The fundamental condition for assay validity is others. Results obtained for cells applied earlier to
the condition of similarity of sample and reference the plate may be different from those applied later.
standard; that is, the dose–response relations Units may differ as a result of a temperature, oxygen
(i.e. slope, asymtopes etc.) for the sample and the or humidity gradient across the plate. If an assay
reference standard should be identical.53 extends over several microtitre plates such differ-
During assay development substantial infor- ences between wells becomes even greater so these
mation about dose–response curves should be and other factors must become part of the definition
collected in order to select an optimal dose range for of the ‘‘experimental unit’’.
potency estimation assays. After such data are It must also be assumed that the responses are
available, analysis in terms of log doses is often completely determined by the specified doses except
found preferable to analysis in terms of absolute for independent and normally distributed random
Biological assays: role and development 357
156%
125%
Limits around
the mean Mean stated Fiducial limits
stated potency potency of assay
85%
64%
1 2 3 4 5 6 7 8 9 10 11
Batch number
Figure 2. An example of how statistical limits are applied to biological assays. A biological should be assayed in several
independent bioassays. Each independent assay will provide an estimate of the potency of a sample from a specified
batch of the biological (r). A mean potency (W) for the batch is obtained from the independent estimates for that batch
and fiducial limits about that mean are obtained using the variability among the log potency estimates. The limits
around the stated potency are determined on the basis of required accuracy of biological administered to patients. The
fiducial limits are set to allow for the variation inherent in bioassays and to ensure confidence in the calculated mean
value for any batch.
deviations. This is a particularly critical assumption completely determined by the specified doses,
and an assumption which it is easy to violate then this variation cannot be random and indepen-
inadvertently. It can be difficult to ensure that the dent, violating one of the essential statistical
treatment applied to the responding units consists assumptions. For example, if replicate responses
only of the specified dose. It is seldom possible for are obtained from neighbouring wells of a micro-
all experimental units to be treated simultaneously titre plate, then they are likely to have been
which leads inevitably to time differences. Some influenced by other common factors than just
doses will be exposed longer than others to the common specified dose (the ‘‘plate effects’’
particular conditions before being applied. Some already described). Their deviations from the
cell populations will have had a longer time with the dose-determined response are thus correlated (i.e.
treatment than others; different parts of the assay not independent), having been influenced by the
will have been carried out at different times presumed common factors. The deviations are
(however slight these may seem). Other treatment also not random because these factors do not
differences may arise if the units treated with some occur by chance and therefore do not apply equally
specified doses on one microtitre plate are more or to any other responses situated elsewhere in the
less vigourously washed than those treated with plate.
other doses on another plate. It appears to be It has been out experience that failing to take
especially difficult to ensure absolutely uniform such effects into account leads to underestimation
treatment of the whole of a plate during incubations of the response variability. This in turn can lead to
over more than a few minutes. apparently significant departures from linearity or
It is also important to show that the variances parallelism and in others to substantial underesti-
of the deviations are homogeneous over the mation of the width of the fiducial limits.
different doses. The basis for the various tests
of validity of an assay as well as the fiducial Statistical analysis of bioassays
limits (i.e. variation) of the potency estimate is the The statistical analysis of bioassays must incor-
deviation of the observed responses from the mean porate not only the estimation of biological potency
response. but also include analysis that takes into account the
The fiducial limits of the assay are calculated assay validity. Various approaches can be taken
from the variation between replicate responses in the statistical analysis of bioassays to take
(Fig. 2). If, however, the responses are not such eventualities into account. Methods for the
358 A. R. Mire-Sluis et al .
statistical analysis of parallel line assays have thus requires some fixed standard.43,44 Although
been described.53 In some fields, statistical methods there are instances of attempts to produce ‘‘stan-
have been developed which attempt to measure dard assay systems’’, beginning with the use of
and account for some of the common factors animals in which the biological effect of different
(e.g. row and column effects) so that they do not products could be observed, these have been largely
influence the analysis in misleading ways. It has unsucessful.45,46 In order to estimate the potency
been our experience that such factors are not of a succession of unknown samples, the samples
in general sufficiently consistent or predictable must be compared to a consistent reference
to make this a profitable approach. Some assay standard. In-house reference standards, usually
procedures appear to be more subject to the consisting of a single well-characterized batch of the
influence of ‘‘unexpected common factors’’ than biological product, are generally used for the day to
others and there are exceptions to any broad day potency estimates of a manufactured product.
generalizations.54 However, if the potencies of different preparations
An approach which can provide valuable infor- of the same protein are to be compared by different
mation concerning the precision of the whole operators using different bioassays worldwide,
assay procedure is the inclusion in assays of a the need for international reference standards and
coded duplicate.49,50,54 For this, two ‘‘identical’’ international unitages is fundamental. The use of
preparations which are considered by the analyst to various individually derived units and conversion
be either a sample and a reference standard, or two factors causes confusion.
independent and different samples are compared The World Health Organization (WHO) has an
in the same assay. If the relative activity of these active and long-standing programme for the inter-
two preparations differs consistently from 1 then national standardization of biological materials.
it is likely that some phenomenon is affecting International potency standards for a large range of
one preparation differently than the other. If the biological materials are available world-wide for the
deviation of the relative activity from 1 is greater standardization of biological assays to internation-
than that predicted on the basis of the fiducial ally recognised reference preparations with defined
limits, then it is likely that the response variability International potency units. There are therapeutic
has been underestimated. products that are soluble receptors or antagonists
Clearly the most reliable measure of assay for proteins and in such cases, these materials are
precision is that obtained by direct calculation standardised against their equivalent primary
using potency estimates from independently re- ligand.
peated assays of the same pairs of preparations,
although this may presuppose that the condition of
similarity is satisfied.
Regulatory aspects of quality assessment
Biological standardization Guidelines have been prepared in both the U.S.A.
The specific activity of various recombinant and E.C.23,55,56 containing details for the assessment
forms of a biological made by different manu- of the potency and stability of rDNA derived
facturers can vary greatly and therefore it is not products. Protocols for the design and analysis of
possible to quantitate the biological activity of bioassays are also included in the European57,58 and
rDNA derived products by mass.41,42 Because 1 mg U.S. Pharmacopoeias.59 It is implicit in all texts that
of one manufacturer’s material does not have biological assays are a vital part of the assessment
the same biological activity as 1 mg of another of biological products. Although exact formats of
manufacturer’s material, the use of mass units is not bioassays are not discussed, generalized issues have
appropriate. As discussed, biological systems are been included. However, the statistical evaluation
subject to change and the biological responses may of bioassays are covered in the pharmacopoeias
be affected by a number of factors which, even to some depth. It should be noted that it is
if known, may not be under the control of the recommended that in-house reference preparations
operator. EC50 values in particular may shift as the (or working standards) are standardised to the
result of changes in cell lines, reagents and assay WHO International standard when available—if
conditions. not, it is recommended to use a National Institute
The assay of biological products, in common with for Biological Standards and Control (NIBSC)
other measurements, is essentially comparative and interim standard.58,60
Biological assays: role and development 359
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