To be used starting January 2022

updated 6-2022
Change Summary Notes:
There are no orgamism changes for the 2022 NHSN reporting year.

The following updates have been made to the document to assist with usabilty:
• A "Combined" tab has been added that includes a column labeled "NHSN Organism Category".
• The "NHSN Organism Category" column denotes how the organism can be used for NHSN reporting. The legend for the org

Legend:
ALL - Full list of organisms available within the NHSN application
CC - Organisms categorized as Common Commensals
MBI - Organisms categorized for Mucosal Barrier Injury
UTI - Organisms categorized for Urinary Tract Infection

Please refer to the appropriate protocol for details related to organisms from each category.

Based on individual search needs, each column can be sorted using the filter buttons at the top right of each column (see oran
sorted alphabetically by the NHSN Display Name Column - as indicated by .
TIP: To search the organism worksheets
1. Select the “Find & Select” button in the upper-right hand corner of the Excel ribbon, (see purple arrow and circle below).
2. Select "Find" from the dropdown menu
3. Type the organism name in the "Find what" field of the "Find and Replace" pop-up box
4. Select search preference using the "Within" field:
• To search an individual worksheet/organism list select 'Sheet'
• To search the full workbook select 'Workbook'
5. Select the "Find All" button.
As posted on the NHSN website, each organism list (worksheet) is
It is possible that your laboratory may identify an organism that cannot be found when referencing the NHSN Orga
you have an organism which is not found on the NHSN Organism List, please conta

NHSN Code NHSN Organism Category

ABISP ALL/MBI/UTI
GRADJ*2 ALL/MBI/UTI
GRADJ*3 ALL/MBI/UTI
STRDF ALL/MBI/UTI
GRANELEG*1 ALL/MBI/UTI
ACANT ALL
ACHOSP ALL/UTI
ACHOLAID ALL/UTI
ACHOOCUL ALL/UTI
ACHSP ALL/UTI
ACHDENI ALL/UTI
ACHPIEC ALL/UTI
ACHRUHL ALL/UTI
ALCXYL ALL/UTI
ACHXYL ALL/UTI
ACISP ALL/UTI
ACIFE ALL/UTI
AFB ALL/UTI
ACIDSP ALL/UTI
ACDEL ALL/UTI
ACIDFACI ALL/UTI
ACIDTEMP ALL/UTI
ACS ALL/UTI
ACBA ALL/UTI
ACICBA ALL/UTI
ACCA ALL/UTI
ACHA ALL/UTI
ACJH ALL/UTI
ACJU ALL/UTI
ACLW ALL/UTI
ACINNOSO ALL/UTI
ACINPITT ALL/UTI
ACIRADI ALL/UTI
ACISCHI ALL/UTI
ACIURSI ALL/UTI
PSEBOY*5 ALL
SCEDBOYD*3 ALL
ACRE ALL
ACREALAB ALL
ACREKILI ALL
ACREPOTR ALL
ACREPOTR*1 ALL
ACRERECI ALL
ACRESTRI ALL
RHINAQUA*2 ALL
ACBSP ALL/UTI
HAEACT*1 ALL/UTI
ACBEQ ALL/UTI
ACBHOMI ALL/UTI
ACBLI ALL/UTI
ACBSU ALL/UTI
ACURE ALL/UTI
ACTME*1 ALL/CC/UTI
ACTISP ALL/UTI
ACTIMASS ALL/UTI
ACTISCHA*1 ALL/UTI
ACTIURIN*1 ALL/UTI
ACTINSP ALL/UTI
ACTINLATI ALL/UTI
ACTINMADU ALL/UTI
ACTINPELL ALL/UTI
ACTSP ALL/CC/UTI
TRUEBERN*1 ALL/CC/UTI
ACTBO ALL/CC/UTI
ACTCARD ALL/CC/UTI
ACTDENT ALL/CC/UTI
ACTEURO ALL/CC/UTI
ACTFUNK ALL/CC/UTI
ACTGE ALL/CC/UTI
ACTGR ALL/CC/UTI
ACTGRAE ALL/CC/UTI
ACTHONG ALL/CC/UTI
ACTIS ALL/CC/UTI
ACTME ALL/CC/UTI
ACTNA ALL/CC/UTI
ACTNASI ALL/CC/UTI
ACTNEUI
ALL/CC/UTI
ACTOD ALL/CC/UTI
ACTORIC ALL/CC/UTI
ACTORIS ALL/CC/UTI
ARCPY*1 ALL/CC/UTI
ACTRADI ALL/CC/UTI
ACTRADIN ALL/CC/UTI
ACTTURI ALL/CC/UTI
ACTUROG ALL/CC/UTI
ACTVI ALL/CC/UTI
ACTINOTISP ALL/UTI
ACTISCHA ALL/UTI
ACTIURIN ALL/UTI
AEROBE ALL/UTI
AEGU ALL/CC/UTI
AECH ALL/CC/UTI
AESGN ALL/CC/UTI
AEUR ALL/CC/UTI
AEURQ ALL/CC/UTI
AEURH ALL/CC/UTI
AEVI ALL/CC/UTI
AES ALL/UTI
AERBEST ALL/UTI
AERPUN ALL/UTI
AERCAVI ALL/UTI
AERENCH ALL/UTI
AERTR*1 ALL/UTI
AEREUCR ALL/UTI
AH ALL/UTI
AERHYDR ALL/UTI
AERJA ALL/UTI
AERME ALL/UTI
AERMOLL ALL/UTI
AERPOPO ALL/UTI
AERPUN*1 ALL/UTI
AERSA ALL/UTI
AERSC ALL/UTI
AERSIMI ALL/UTI
AERSOB ALL/UTI
AERTR ALL/UTI
AEVER ALL/UTI
AFIPSP ALL/UTI
AFIPCLEV ALL/UTI
AFIPFELI ALL/UTI
AGGRSP ALL/UTI
HAEACT ALL/UTI
HAEAP ALL/UTI
AGGRSEGN ALL/UTI
AGSP ALL/UTI
RHIRAD*1 ALL/UTI
AGROSP ALL/UTI
ALSP ALL/UTI
BORBR*1 ALL/UTI
ALFE ALL/UTI
ALFE*1 ALL/UTI
ACHPIEC*1 ALL/UTI
ALCXYL*1 ALL/UTI
ALXY ALL/UTI
CHRYSP*1 ALL
SCEDAPIO*2 ALL
ALISSP ALL/UTI
ALISFETA ALL/UTI
ALISTSP ALL/MBI/UTI
BACPU ALL/MBI/UTI
PSEBOY*2 ALL
ALLOSP
ALL/UTI

ALLOOTIT ALL/UTI
ALLOSSP ALL/MBI/UTI
ALLOOMNI ALL/MBI/UTI
AS ALL/UTI
ASNSP ALL/CC/MBI/UTI
ALTER ALL
ALTERALTE ALL
ALTERDIAN ALL
ALTERINFE ALL
ALTERALTE*1 ALL
ALTERTENU ALL
ALYSSP ALL/UTI
ALYSCRAS ALL/UTI
AMYCSP ALL/UTI
AMYCORIE ALL/UTI
ANS ALL/UTI
ANAGNR ALL/MBI/UTI
ANAGNCB ALL/UTI
ANAGNC ALL/UTI
ANAGPR ALL/UTI
ANAGPCB ALL/UTI
ANAGPC ALL/UTI
ANSP ALL/MBI/UTI
ANSU ALL/MBI/UTI
ANTHOM ALL/MBI/UTI
ANASP ALL/MBI/UTI
PPSHY ALL/MBI/UTI
ANALAC ALL/MBI/UTI
ANAOCTA ALL/MBI/UTI
ANAPRE ALL/MBI/UTI
ANATETR ALL/MBI/UTI
ANAVAG ALL/MBI/UTI
ANRSP ALL/MBI/UTI
ANRFU ALL/MBI/UTI
ANAPSP ALL/UTI
ANCYC ALL
ANEUSP ALL/UTI
ANEUANEU ALL/UTI
ANGIO ALL
APOPSP ALL
APOPELEG ALL
AQUABSP ALL/UTI
AQUABPARV ALL/UTI
PRPRO*2 ALL/CC/UTI
FLAVI*1 ALL
ARCSP ALL/CC/UTI
TRUEBERN*2 ALL/CC/UTI
ARCHA ALL/CC/UTI
ARCPLUR ALL/CC/UTI
ARCPY*3 ALL/CC/UTI
ACOSP ALL/MBI/UTI
ACOBUTZ ALL/MBI/UTI
ACONI ALL/MBI/UTI
ARETU ALL
ARSENISP ALL/UTI
ARSENIBOLI ALL/UTI
ARTSP ALL/CC/UTI
ARTAGIL ALL/CC/UTI
ARTALBU ALL/CC/UTI
ARTARIL ALL/CC/UTI
ARTASTR ALL/CC/UTI
ARTAURE ALL/CC/UTI
ARTBERG ALL/CC/UTI
ARTCHLO ALL/CC/UTI
ARTCITR ALL/CC/UTI
ARTCREA ALL/CC/UTI
ARTCRYS ALL/CC/UTI
ARTCUMM ALL/CC/UTI
ARTFLAV ALL/CC/UTI
ARTGAND ALL/CC/UTI
ARTGANG ALL/CC/UTI
ARTGLOB ALL/CC/UTI
ARTHIST ALL/CC/UTI
ARTILIC ALL/CC/UTI
ARTKERG ALL/CC/UTI
ARTKORE ALL/CC/UTI
ARTLUTE ALL/CC/UTI
ARTMETH ALL/CC/UTI
ARTMYSO ALL/CC/UTI
ARTNASI ALL/CC/UTI
ARTNICO ALL/CC/UTI
ARTNICOT ALL/CC/UTI
ARTNITR ALL/CC/UTI
ARTORYZ ALL/CC/UTI
ARTOXYD ALL/CC/UTI
ARTPASC ALL/CC/UTI
ARTPOLY ALL/CC/UTI
ARTPROT ALL/CC/UTI
ARTPSYC ALL/CC/UTI
ARTPSYCH ALL/CC/UTI
ARTRAMO ALL/CC/UTI
ARTRHOM ALL/CC/UTI
ARTROSE ALL/CC/UTI
ARTRUSS ALL/CC/UTI
ARTSCLE ALL/CC/UTI
PP*2 ALL/UTI
ARTSULF ALL/CC/UTI
ARTSULFU ALL/CC/UTI
ARTURAT ALL/CC/UTI
ARTUREA ALL/CC/UTI
CORVAR*2 ALL/CC/UTI
ARTVISC ALL/CC/UTI
ARTWOLU ALL/CC/UTI
ARTHSP ALL
ARTHRSP ALL
ASCAR ALL
ASU ALL
ASPCAND ALL
ASPCLAV ALL
ASPDEFL ALL
ASPFLAV ALL
AF ALL
ASPFU ALL
ASPGLAU ALL
ASPNIDU ALL
ASPNI ALL
ASPNIVE ALL
ASPOCHR ALL
ASPOR ALL
ASPPARA ALL
ASPREST ALL
ASPSYDO ALL
ASPTERR ALL
ASPUSTU ALL
ASPVERS ALL
ASPWENT ALL
ASTTU ALL
ATOSP ALL/MBI/UTI
ATOFOSS ALL/MBI/UTI
ATOMIN ALL/MBI/UTI
ATOPAR ALL/MBI/UTI
ATORIM ALL/MBI/UTI
ATOVAGI ALL/MBI/UTI
AUREIALTA*1 ALL/UTI
AUREISP ALL/UTI
AUREIALTA ALL/UTI
MICRLIQU*1 ALL/CC/UTI
AURESP ALL
AUREPULL ALL
AVERSP ALL/MBI/UTI
AZORHSP ALL/UTI
AZORHCAUL ALL/UTI
AZOSSP ALL/UTI
AZOSBRAS ALL/UTI
CANLIP*1 ALL/MBI
PARVOB19 ALL
BABES ALL
BABMI ALL
BAC ALL/CC/UTI
BAEOL ALL/CC/UTI
BAERI ALL/CC/UTI
BAGAR ALL/CC/UTI
BREVIAGRI*1 ALL/CC/UTI
BALCA ALL/CC/UTI
BALGI ALL/CC/UTI
PAEALV*1 ALL/CC/UTI
BAMYL ALL/CC/UTI
ANEUANEU*1 ALL/UTI
BA ALL/UTI
BAQUI ALL/CC/UTI
BARSE ALL/CC/UTI
BASAH ALL/CC/UTI
BATRO ALL/CC/UTI
BAZOT ALL/CC/UTI
BBADI ALL/CC/UTI
BBARB ALL/CC/UTI
BBATA ALL/CC/UTI
BBENZ ALL/CC/UTI
BBORO ALL/CC/UTI
BREBRE*1 ALL/CC/UTI
BBUTA ALL/CC/UTI
BCARB ALL/CC/UTI
BREVICENT*1 ALL/CC/UTI
BC ALL/CC/UTI
BCERG ALL/CC/UTI
BCHIT ALL/CC/UTI
BACCIR ALL/CC/UTI
BACCIRG ALL/CC/UTI
BCLARK ALL/CC/UTI
BCLAUS ALL/CC/UTI
BACCOA ALL/CC/UTI
BCOHN ALL/CC/UTI
BDECI ALL/CC/UTI
BDECO ALL/CC/UTI
BDIPS ALL/CC/UTI
BDREN ALL/CC/UTI
BEDAP*1 ALL/CC/UTI
BEHIM ALL/CC/UTI
BENDO ALL/CC/UTI
BFARR ALL/CC/UTI
BFAST ALL/CC/UTI
BACFIR ALL/CC/UTI
BFLEX ALL/CC/UTI
BFORD ALL/CC/UTI
BFORT ALL/CC/UTI
BFUMA ALL/CC/UTI
BFUNI ALL/CC/UTI
BREVIAGRI*2 ALL/CC/UTI
BGALA ALL/CC/UTI
BGELA ALL/CC/UTI
BGIBS ALL/CC/UTI
BGINS ALL/CC/UTI
BGORN ALL/CC/UTI
BHALM ALL/CC/UTI
BHALDF ALL/CC/UTI
BHALDR ALL/CC/UTI
BHORI ALL/CC/UTI
BHORT ALL/CC/UTI
BHUMI ALL/CC/UTI
BHWAJ ALL/CC/UTI
BIDRI ALL/CC/UTI
BINDI ALL/CC/UTI
BINFA ALL/CC/UTI
BINFE ALL/CC/UTI
BJEOT ALL/CC/UTI
BKAUS ALL/CC/UTI
BKORL ALL/CC/UTI
BKRUL ALL/CC/UTI
BLAEV*1 ALL/UTI
PAELARV*1 ALL/CC/UTI
BRELAT*1 ALL/CC/UTI
PAELENT*1 ALL/CC/UTI
BACLEN ALL/CC/UTI
BACLIC ALL/CC/UTI
BLUCI ALL/CC/UTI
PAEMAC*2 ALL/CC/UTI
BMACR ALL/CC/UTI
BMACY ALL/CC/UTI
BMARN ALL/CC/UTI
BMARS ALL/CC/UTI
BMASS ALL/CC/UTI
BACMEG ALL/CC/UTI
BMETH ALL/CC/UTI
BMOJA ALL/CC/UTI
BMUCI ALL/CC/UTI
BMURA ALL/CC/UTI
BMYCO ALL/CC/UTI
BNAGA ALL/CC/UTI
BNEAL ALL/CC/UTI
BNIAC ALL/CC/UTI
BNOVA ALL/CC/UTI
BODYS ALL/CC/UTI
BOKUH ALL/CC/UTI
BOLER ALL/CC/UTI
PAEPABU*1 ALL/CC/UTI
BPALL ALL/CC/UTI
VIRPAN*1 ALL/CC/UTI
BREVIPARA*1 ALL/CC/UTI
BPAST ALL/CC/UTI
BPATA ALL/CC/UTI
BPOCH ALL/CC/UTI
PAEPOL*2 ALL/CC/UTI
PAEPOPI*1 ALL/CC/UTI
BPSDL ALL/CC/UTI
BPSDF ALL/CC/UTI
BPSMY ALL/CC/UTI
BPSYP ALL/CC/UTI
BPSYS ALL/CC/UTI
BPULV ALL/CC/UTI
BACPUM ALL/CC/UTI
RUMMPYCN*1 ALL/CC/UTI
BSALE ALL/CC/UTI
BSALI ALL/CC/UTI
BSELE ALL/CC/UTI
BSHAC ALL/CC/UTI
BSILV*1 ALL/CC/UTI
BSIMP ALL/CC/UTI
BSIRA ALL/CC/UTI
BACSM ALL/CC/UTI
BSOLI ALL/CC/UTI
BSONO ALL/CC/UTI
BSPOR ALL/CC/UTI
BSUBT ALL/CC/UTI
BSU ALL/CC/UTI
BACSUG ALL/CC/UTI
BSIN ALL/CC/UTI
BSSP ALL/CC/UTI
BSS ALL/CC/UTI
BTEQU ALL/CC/UTI
BTHMN ALL/CC/UTI
BTHMM ALL/CC/UTI
BTHMC ALL/CC/UTI
BTHMCL ALL/CC/UTI
GEOBTHER*1 ALL/UTI
BTHMG ALL/CC/UTI
PAETHIA*1 ALL/CC/UTI
BACTHU ALL/CC/UTI
BTUSC ALL/CC/UTI
PAEVALI*2 ALL/CC/UTI
BVALL ALL/CC/UTI
BVEDD ALL/CC/UTI
BVELE ALL/CC/UTI
BVIET ALL/CC/UTI
CHRVI*1 ALL/UTI
BVIRE ALL/CC/UTI
BWEIH ALL/CC/UTI
BACNANT ALL/CC/UTI
CORMA*1 ALL/CC/UTI
BAS ALL/MBI/UTI
PREBI*1 ALL/MBI/UTI
PREBC*2 ALL/MBI/UTI
PREBU*1 ALL/MBI/UTI
BACCC ALL/MBI/UTI
PSEFCAPI*1 ALL/MBI/UTI
PREBC*3 ALL/MBI/UTI
CLOCL*1 ALL/MBI/UTI
BACCG ALL/MBI/UTI
PRECO*1 ALL/MBI/UTI
PREDE*1 ALL/MBI/UTI
PREDI*1 ALL/MBI/UTI
BACDT*1 ALL/MBI/UTI
BACEG ALL/MBI/UTI
POREN*1 ALL/MBI/UTI
BF ALL/MBI/UTI
BFG ALL/MBI/UTI
ANRFU*1 ALL/MBI/UTI
PORGI*1 ALL/MBI/UTI
PARAGOLD*1 ALL/MBI/UTI
CAMGR*1 ALL/UTI
PREHE*1 ALL/MBI/UTI
MEGAHYPE*2 ALL/MBI/UTI
PREIN*1 ALL/MBI/UTI
PORLE*1 ALL/MBI/UTI
PORSA*1 ALL/MBI/UTI
BACMASS ALL/MBI/UTI
PREM*1 ALL/MBI/UTI
BACMR*1 ALL/MBI/UTI
MITML*2 ALL/MBI/UTI
DICNO*1 ALL/MBI/UTI
BACNORD ALL/MBI/UTI
CAPOC*1 ALL/MBI/UTI
PREOR*1 ALL/MBI/UTI
PREOS*1 ALL/MBI/UTI
PREOU*1 ALL/MBI/UTI
BACOV ALL/MBI/UTI
PREBC*1 ALL/MBI/UTI
TISPR*1 ALL/MBI/UTI
BACPU*1 ALL/MBI/UTI
BACPYOG ALL/MBI/UTI
PRERU*1 ALL/MBI/UTI
PORSA*2 ALL/MBI/UTI
BACSP*1 ALL/MBI/UTI
BACST ALL/MBI/UTI
BACPYOG*1 ALL/MBI/UTI
BACPYOG*2 ALL/MBI/UTI
BACTH ALL/MBI/UTI
BACUN ALL/MBI/UTI
CAMUREO*1 ALL/UTI
PREVE*1 ALL/MBI/UTI
BACVU ALL/MBI/UTI
PREZO ALL/MBI/UTI
BALAN ALL
BALNSP ALL/UTI
BALNALPI ALL/UTI
BARSP ALL/UTI
BARBA ALL/UTI
BARCLAR ALL/UTI
BARELIZ ALL/UTI
BARHEN ALL/UTI
BARQUI ALL/UTI
BARVIN ALL/UTI
BASID ALL
BASIDRAN*1 ALL
BASIDRAN*2 ALL
BASIDRAN*3 ALL
BASIDRAN ALL
BEAUV ALL
BEAUVBAS ALL
VIBAL*2 ALL/UTI
VIBHAR*1 ALL/UTI
VIBPA*2 ALL/UTI
VIBVU*1 ALL/UTI
BERSP ALL/UTI
BERZOO ALL/UTI
BS ALL/UTI
STRABH ALL/UTI
SNABBH ALL/UTI
BIFSP ALL/MBI/UTI
BIFADOL ALL/MBI/UTI
BIFANGU ALL/MBI/UTI
BIFDE*1 ALL/MBI/UTI
BIFBI ALL/MBI/UTI
BIFBR ALL/MBI/UTI
BIFCATE ALL/MBI/UTI
BIFDE ALL/MBI/UTI
BIFDE*2 ALL/MBI/UTI
BIFGALL ALL/MBI/UTI
BIFINF ALL/MBI/UTI
BIFLO ALL/MBI/UTI
BIFPSEU ALL/MBI/UTI
BIFSCAR ALL/MBI/UTI
BIFLO*1 ALL/MBI/UTI
BILSP ALL/MBI/UTI
BILWA ALL/MBI/UTI
BIPOSP ALL
BIPOAUST ALL
BIPOHAWA ALL
BIPOHAWA*1 ALL
BIPOSPIC ALL
BK ALL
BLASSP ALL
BLAUSP ALL/MBI/UTI
BLAUCOCC ALL/MBI/UTI
RUMHAN ALL/MBI/UTI
BLAUPROD ALL/MBI/UTI
BOCA ALL
LICE*1 ALL
BORSP ALL/UTI
BORAVI ALL/UTI
BORBR ALL/UTI
BORHINZ ALL/UTI
BORHOLM ALL/UTI
BORPA ALL/UTI
BORPE ALL/UTI
BORPETR ALL/UTI
BORTREM ALL/UTI
BOSP ALL/UTI
BOAFZE ALL/UTI
BOANSE ALL/UTI
BOBU ALL/UTI
BOCAUC ALL/UTI
BOCORI ALL/UTI
BOCROC ALL/UTI
BODUTT*1 ALL/UTI
BODUTT ALL/UTI
BOGA ALL/UTI
BOHE ALL/UTI
BOHISP ALL/UTI
BOJAPO ALL/UTI
BOLUSI ALL/UTI
BOMAZZ ALL/UTI
BOMIYA ALL/UTI
BORE*2 ALL/UTI
BORE*1 ALL/UTI
BOPA ALL/UTI
BORE ALL/UTI
BOTANU ALL/UTI
BOTHEI ALL/UTI
BOTU ALL/UTI
BOVALA ALL/UTI
BOVENE ALL/UTI
LASISP*1 ALL
LASITHEO*1 ALL
BRACHSP ALL/UTI
BRACHMURI ALL/UTI
BIPOSPIC*1 ALL
BRACSP ALL/UTI
BRACAALB ALL/UTI
BRACPILO ALL/UTI
MORCA*1 ALL/UTI
MORCUNI*2 ALL/UTI
MOROVIS*1 ALL/UTI
BREVISP ALL/CC/UTI
BREVIAGRI ALL/CC/UTI
BREBRE ALL/CC/UTI
BREVICENT ALL/CC/UTI
BRELAT ALL/CC/UTI
BREVIPARA ALL/CC/UTI
BRVSP ALL/CC/UTI
CURTOALBI*1 ALL/UTI
CORAMM*1 ALL/CC/UTI
BRVCAS ALL/CC/UTI
BRVEPI ALL/CC/UTI
MICRIMPE*2 ALL/CC/UTI
BRVLINE ALL/CC/UTI
BRVLUTE ALL/CC/UTI
BRVMCBR ALL/CC/UTI
MICROXYD*1 ALL/CC/UTI
BRVBRAVE ALL/CC/UTI
BRVSANG ALL/CC/UTI
CORVIT*1 ALL/CC/UTI
BREVUSP ALL/UTI
BREDIM ALL/UTI
BREVES ALL/UTI
BRSP ALL/UTI
BRAB ALL/UTI
BRCA ALL/UTI
BRME ALL/UTI
BRNEOT ALL/UTI
BROVIS ALL/UTI
BRSU ALL/UTI
BUDSP ALL/UTI
BUDAQ ALL/UTI
BULLSP ALL/UTI
BULLEXTR ALL/UTI
BUNYA ALL
BURSP ALL/UTI
BURAMBI ALL/UTI
BURANTH ALL/UTI
BURARBO ALL/UTI
BURCENO ALL/UTI
BURCE ALL/UTI
BURCEPCOM ALL/UTI
BURGL*5 ALL/UTI
BURCONT ALL/UTI
BURDIFF ALL/UTI
BURDOLO ALL/UTI
BURFUNG*1 ALL/UTI
BURGL ALL/UTI
BURLATA ALL/UTI
BURLATE ALL/UTI
BURMA ALL/UTI
BURMETA ALL/UTI
BURMULT ALL/UTI
RALPIC*1 ALL/UTI
BURPM ALL/UTI
BURPYRR ALL/UTI
BURSTAB ALL/UTI
BURTHAI ALL/UTI
BURUBON ALL/UTI
BURVIET ALL/UTI
BUTSP ALL/MBI/UTI
BUTAG ALL/MBI/UTI
BUTBREN ALL/MBI/UTI
BUTFERR ALL/MBI/UTI
BUTGAVI ALL/MBI/UTI
BUTIZAR ALL/MBI/UTI
BUTNO ALL/MBI/UTI
BUTWARM ALL/MBI/UTI
EUBLI*1 ALL/MBI/UTI
BUTYRSP ALL/UTI
BUTYRVIRO ALL/UTI
BUTYSP ALL/UTI
BUTYFIBR ALL/UTI
BUTYHUNG ALL/UTI
CALIV ALL
CALENC ALL
CALSP ALL/UTI
KLEGRA*1 ALL/MBI/UTI
CAMSP ALL/UTI
ACOBUTZ*1 ALL/MBI/UTI
HELCI*1 ALL/MBI/UTI
CAMCL ALL/UTI
CAMCO ALL/UTI
CAMCU ALL/UTI
HELFE*1 ALL/MBI/UTI
CAMFU ALL/UTI
CAMFF ALL/UTI
CAMJE*1 ALL/UTI
CAMFV ALL/UTI
CAMGR ALL/UTI
CAMHELV ALL/UTI
CAMHOMI ALL/UTI
CAMHY ALL/UTI
CAMINSU ALL/UTI
CAMJE ALL/UTI
CAMJD ALL/UTI
CAMJJ ALL/UTI
CAMLANI ALL/UTI
CAMLA ALL/UTI
CAMLA*1 ALL/UTI
CAMSM ALL/UTI
HELMU*2 ALL/MBI/UTI
ACONI*1 ALL/MBI/UTI
HELPY*1 ALL/MBI/UTI
CAMRE ALL/UTI
CAMSHOW ALL/UTI
CAMSPUT ALL/UTI
CAMSB ALL/UTI
CAMSM*1 ALL/UTI
CAMSS ALL/UTI
CAMUPSA ALL/UTI
CAMUREO ALL/UTI
CAS ALL/MBI
CA ALL/MBI
CANST*1 ALL/MBI
CAAUR ALL/MBI
CANBRAC ALL/MBI
CANCAT*2 ALL/MBI
CANCAT ALL/MBI
CANCIF ALL/MBI
CANDUB ALL/MBI
CANDUOB ALL/MBI
CYBEFABI*1 ALL
CANFAM*1 ALL
CG ALL/MBI
CANGU ALL/MBI
CANGUI ALL/MBI
CANHAE ALL/MBI
CANINC ALL/MBI
CANINT ALL/MBI
CANKEF ALL/MBI
CK ALL/MBI
CANLAM ALL/MBI
CANLIP ALL/MBI
CANLU ALL/MBI
CANMETA ALL/MBI
CANNIVA ALL/MBI
CANNOR ALL/MBI
CANLU*2 ALL/MBI
CANORTH ALL/MBI
CP ALL/MBI
CANPARACOM ALL/MBI
CANLU*1 ALL/MBI
CANPARA ALL/MBI
CANPEL ALL/MBI
CANPIN ALL/MBI
CANPUL ALL/MBI
CANCAT*1 ALL/MBI
CANRUG ALL/MBI
CANSAKE ALL/MBI
CANPIN*2 ALL/MBI
CANST ALL/MBI
CANDSTEL ALL/MBI
CT ALL/MBI
CANUTI ALL/MBI
CANVIN ALL/MBI
CANVIS ALL/MBI
CANZEY ALL/MBI
CAPSP ALL/MBI/UTI
CAPCA ALL/MBI/UTI
CAPCYNO ALL/MBI/UTI
CAPGI ALL/MBI/UTI
CAPGRAN ALL/MBI/UTI
CAPHEMO ALL/MBI/UTI
CAPOC ALL/MBI/UTI
CAPST ALL/MBI/UTI
ACS*2 ALL/UTI
ENC*4 ALL/MBI/UTI
KP*3 ALL/MBI/UTI
CARSP ALL/UTI
CARHO ALL/UTI
CARVALV ALL/UTI
CATABSP ALL/UTI
CATABHONG ALL/UTI
CATESP ALL/UTI
CATEMITS ALL/UTI
CATOSP ALL/UTI
CATOMORB ALL/UTI
CEDSP ALL/MBI/UTI
CEDDA ALL/MBI/UTI
CEDLA ALL/MBI/UTI
CEDNE ALL/MBI/UTI
CELLSP ALL/CC/UTI
CELLUCELL*1 ALL/CC/UTI
CELLHOMI ALL/CC/UTI
CELLHUMI ALL/CC/UTI
CELLUSP ALL/CC/UTI
CELLUCELL ALL/CC/UTI
CENSP ALL/UTI
CENPE ALL/UTI
ACRE*1 ALL
ACREKILI*1 ALL
ACREPOTR*2 ALL
ACRERECI*1 ALL
ACRESTRI*1 ALL
CHAESP ALL
CHAEATRO ALL
CHAEGLOB ALL
CHIKVI ALL
CHILSP ALL
CHILMESN ALL
CHLSP ALL/UTI
CHLPN*1 ALL/UTI
CHLPS*3 ALL/UTI
CHLTR ALL/UTI
CHLASP ALL/UTI
CHLAABOR ALL/UTI
CHLPN ALL/UTI
CHLPS ALL/UTI
CHRSP ALL/UTI
CHRVI*2 ALL/UTI
CHRVI ALL/UTI
CHRYS ALL/UTI
CHRGLE ALL/UTI
CHRIND ALL/UTI
CHSSP ALL/UTI
CHSLU ALL/UTI
CHSLU*2 ALL/UTI
CHRYSP ALL
CS ALL/MBI/UTI
CITAM ALL/MBI/UTI
CITBRA ALL/MBI/UTI
CITKO*1 ALL/MBI/UTI
CITA1 ALL/MBI/UTI
CF ALL/MBI/UTI
CITGILL ALL/MBI/UTI
CITKO ALL/MBI/UTI
CITMURL ALL/MBI/UTI
CITRODE ALL/MBI/UTI
CITSED ALL/MBI/UTI
CITWER ALL/MBI/UTI
CITYOU ALL/MBI/UTI
CLADSP ALL
CLADBANT ALL
CLADO ALL
CLADOCLAD ALL
CLADOHERB ALL
CLADOSPHA ALL
EXOPWERN*1 ALL
CLAVSP ALL
CLAVLUSI ALL
CLOSTRSP ALL/MBI/UTI
CD ALL/UTI
CLS ALL/MBI/UTI
CLOSAR*1 ALL/MBI/UTI
CLOAR ALL/MBI/UTI
CLOBA*3 ALL/MBI/UTI
CLOBA ALL/MBI/UTI
EUBBARK*1 ALL/MBI/UTI
CLOBART ALL/MBI/UTI
CLOBEIJ ALL/MBI/UTI
CLOBI ALL/MBI/UTI
CLOBOLT ALL/MBI/UTI
CLOBO ALL/MBI/UTI
CLOBU ALL/MBI/UTI
CLOCA ALL/MBI/UTI
CLOCN ALL/MBI/UTI
CLOCELE ALL/MBI/UTI
CLOCL ALL/MBI/UTI
CLOCO ALL/MBI/UTI
CLOCOCL ALL/MBI/UTI
CD*2 ALL/UTI
CLODISP ALL/MBI/UTI
CLOFA ALL/MBI/UTI
CLOGH*1 ALL/MBI/UTI
CLOGH ALL/MBI/UTI
CLOGL ALL/MBI/UTI
CLOHA ALL/MBI/UTI
CLOHT ALL/MBI/UTI
CLOHATH ALL/MBI/UTI
CLOHI ALL/MBI/UTI
CLOID ALL/MBI/UTI
CLOIN ALL/MBI/UTI
CLOINTE ALL/MBI/UTI
CLOIR ALL/MBI/UTI
CLOIR*1 ALL/MBI/UTI
CLOCO*1 ALL/MBI/UTI
CLOLEPT ALL/MBI/UTI
CLOLI ALL/MBI/UTI
CLOMA ALL/MBI/UTI
CLONOVY ALL/MBI/UTI
FLAVPLAU*1 ALL/MBI/UTI
CLOOR ALL/MBI/UTI
CLOBA*1 ALL/MBI/UTI
CLOPU ALL/MBI/UTI
CLOBA*2 ALL/MBI/UTI
CLP ALL/MBI/UTI
CLOFA*1 ALL/MBI/UTI
CLOBU*1 ALL/MBI/UTI
CLOPS ALL/MBI/UTI
CLORA ALL/MBI/UTI
CLOSAR ALL/MBI/UTI
CLOSE ALL/MBI/UTI
CLOSO ALL/MBI/UTI
CLOSH ALL/MBI/UTI
CLOSPIR ALL/MBI/UTI
CLOSP ALL/MBI/UTI
CLOSPOR ALL/MBI/UTI
CLOSU ALL/MBI/UTI
CLOSY ALL/MBI/UTI
CLOTE ALL/MBI/UTI
CLOTT ALL/MBI/UTI
FILVIL*1 ALL/MBI/UTI
CLONPERF ALL/MBI/UTI
COKESP ALL
COKERECU ALL
COSP ALL/MBI/UTI
COLLSP ALL/MBI/UTI
COLAER ALL/MBI/UTI
COLLINTE ALL/MBI/UTI
COLLSTER ALL/MBI/UTI
REOCT ALL
COMSP ALL/UTI
DELFAC*1 ALL/UTI
COMAQUA ALL/UTI
COMKERS ALL/UTI
COMTR ALL/UTI
COMTE ALL/UTI
CONID ALL
CONIDCOR ALL
CONIDINC ALL
CONISP ALL
POXOR*3 ALL
POXOR*1 ALL
COPRSP ALL/UTI
COPREUTA ALL/UTI
CORGN ALL/CC/UTI
CORACC ALL/CC/UTI
CORA ALL/CC/UTI
CORAA ALL/CC/UTI
CORAL ALL/CC/UTI
CORAMM ALL/CC/UTI
CORAMY ALL/CC/UTI
CORAPP ALL/CC/UTI
CORAQL ALL/CC/UTI
CORARG ALL/CC/UTI
CORATY ALL/CC/UTI
CORAR ALL/CC/UTI
CORARS ALL/CC/UTI
CORARSC ALL/CC/UTI
CORBET ALL/CC/UTI
CORBO ALL/CC/UTI
CORCAL ALL/CC/UTI
CORCAM ALL/CC/UTI
CORCAP ALL/CC/UTI
CORCAS ALL/CC/UTI
CORCSP ALL/CC/UTI
CORCIC ALL/CC/UTI
CORCON ALL/CC/UTI
CORCOY ALL/CC/UTI
CORCY ALL/CC/UTI
CORDI ALL/UTI
CORDUR ALL/CC/UTI
COREFF ALL/CC/UTI
RHOEQ*2 ALL/CC/UTI
CORFAL ALL/CC/UTI
RHOFASC*2 ALL/CC/UTI
CORFEL ALL/CC/UTI
CORFVS ALL/CC/UTI
CORST*1 ALL/CC/UTI
CORFRE ALL/CC/UTI
CORGEN ALL/CC/UTI
CORGLA ALL/CC/UTI
CORGLU ALL/CC/UTI
CORGL ALL/CC/UTI
CORHAL ALL/CC/UTI
ARCHA*1 ALL/CC/UTI
CORHOA ALL/CC/UTI
CORPD*1 ALL/CC/UTI
CORIMI ALL/CC/UTI
CORJK ALL/CC/UTI
CORKRO ALL/CC/UTI
CORKU ALL/CC/UTI
CORGL*1 ALL/CC/UTI
CORLIP ALL/CC/UTI
CORMAC ALL/CC/UTI
CORMAN ALL/CC/UTI
CORMSL ALL/CC/UTI
CORMST ALL/CC/UTI
CORMA ALL/CC/UTI
CORMED ALL/CC/UTI
CORMI ALL/CC/UTI
CORVAR*1 ALL/CC/UTI
CORMUC ALL/CC/UTI
CORMRS ALL/CC/UTI
CORKU*1 ALL/CC/UTI
CORMY ALL/CC/UTI
CORNEP ALL/CC/UTI
CORAR*1 ALL/CC/UTI
CORPS*1 ALL/CC/UTI
TSUKPAUR*2 ALL/CC/UTI
CORPHO ALL/CC/UTI
CORPI ALL/CC/UTI
CORPRO ALL/CC/UTI
CORPD ALL/CC/UTI
CORPST ALL/CC/UTI
CORPS ALL/CC/UTI
CORPSM ALL/CC/UTI
ARCPY*2 ALL/CC/UTI
CORPYRU ALL/CC/UTI
CORRE ALL/CC/UTI
CORRES ALL/CC/UTI
CORRIE ALL/CC/UTI
CORRUB ALL/CC/UTI
CORGLU*1 ALL/CC/UTI
CORSIM ALL/CC/UTI
CORSIN ALL/CC/UTI
CORSPI ALL/CC/UTI
CORSPM ALL/CC/UTI
CORST ALL/CC/UTI
CORSUI ALL/CC/UTI
CORSUN ALL/CC/UTI
CORTEN ALL/CC/UTI
CORTER ALL/CC/UTI
CORTES ALL/CC/UTI
CORTHO ALL/CC/UTI
CORTUB ALL/CC/UTI
CORTUSC ALL/CC/UTI
CORUL ALL/CC/UTI
CORUR ALL/CC/UTI
CORURE ALL/CC/UTI
CORVAR ALL/CC/UTI
CORVAR*3 ALL/CC/UTI
CORVIS ALL/CC/UTI
CORVIT ALL/CC/UTI
CORVIT*2 ALL/CC/UTI
CORVIT*3 ALL/CC/UTI
CORXE ALL/CC/UTI
CORNCD ALL/CC/UTI
CORNCJ ALL/CC/UTI
CORTOX ALL/CC/UTI
CORGPB ALL/CC/UTI
CXLSU ALL/UTI
CXLBU ALL/UTI
CJD ALL
BUNCC ALL
CROSP ALL/MBI/UTI
CRODUB ALL/MBI/UTI
CROMAL ALL/MBI/UTI
CROMUY ALL/MBI/UTI
CROSAK ALL/MBI/UTI
CROTUR ALL/MBI/UTI
CRYPSP ALL/UTI
CRYPCURT ALL/UTI
CANPARA*1 ALL/MBI
CANUTI*1 ALL/MBI
CSPOR ALL
CSPORHOM ALL
CSPORPAR ALL
CUNNSP ALL
CUNNBERT ALL
CUPRSP ALL/UTI
CUPRBASI ALL/UTI
CUPRGILA ALL/UTI
CUPRMETA ALL/UTI
CUPRNECA ALL/UTI
CUPRPAUC ALL/UTI
CUPRRESP ALL/UTI
CURTOSP ALL/UTI
CURTOALBI ALL/UTI
CURVA ALL
CURVAGEN ALL
CURVALUN ALL
BIPOSPIC*2 ALL
BIPOSPIC*3 ALL
CUTISP ALL/CC/UTI
PRPAC ALL/CC/UTI
CYBEFABI ALL
CYCLSP ALL
CYCLCAYE ALL
CYSTI ALL
PEDOHEPA*3 ALL/UTI
OCHRCONS*1 ALL
OCHRGALL*2 ALL
DEBASP ALL
CANFAM ALL
PICPOL*2 ALL
DEINOSP ALL/UTI
DELFSP ALL/UTI
DELFAC ALL/UTI
HEPD*1 ALL
DENGE ALL
DERMASP ALL/CC/UTI
DERMAHOM ALL/CC/UTI
DERMSP ALL/CC/UTI
DENISH ALL/CC/UTI
DERMATSP ALL/UTI
DERMATCON ALL/UTI
DERMATCON*1 ALL/UTI
DSMSP ALL/UTI
DSVSP ALL/UTI
DSVDE ALL/UTI
DSVPIG ALL/UTI
DSVVUL ALL/UTI
DIALSP ALL/MBI/UTI
DIALMICR ALL/MBI/UTI
DIALPNEU ALL/MBI/UTI
DIBOT*1 ALL
DICSP ALL/MBI/UTI
DICNO ALL/MBI/UTI
DIENSP ALL
DIENFRAG ALL
DIETSP ALL/UTI
DIETCINN ALL/UTI
DIPTH ALL/CC/UTI
DIPTHAE ALL/CC/UTI
DIPTHAN ALL/CC/UTI
DIBOT ALL
DIPYL ALL
DOLOSP ALL/UTI
DOLOPAUC ALL/UTI
DOLOSSP ALL/UTI
DOLOPIGR ALL/UTI
DORESP ALL/UTI
DOREFORM ALL/UTI
DORELONG ALL/UTI
DRECH ALL
BIPOAUST*1 ALL
EXSEROST*4 ALL
BIPOHAWA*2 ALL
EXSEROST*1 ALL
BIPOSPIC*4 ALL
DYELSP ALL/UTI
DYSGSP ALL/UTI
DYSGCAPN ALL/UTI
DYSGGADE ALL/UTI
EEE ALL
EBOLA ALL
ECHIN ALL
MEASL*2 ALL
EDWSP ALL/MBI/UTI
EDWTR*1 ALL/MBI/UTI
EDWHO ALL/MBI/UTI
EDWIC ALL/MBI/UTI
EDWTR ALL/MBI/UTI
ASCAR*1 ALL
EGGESP ALL/MBI/UTI
EUBLE ALL/MBI/UTI
EGGESINE ALL/MBI/UTI
EGGERSP ALL/MBI/UTI
LACCA ALL/MBI/UTI
EHRLSP ALL/UTI
EIKSP ALL/UTI
EIC ALL/UTI
ELIZSP ALL/UTI
ELIZME ALL/UTI
CHRYSP*2 ALL
EMPSP ALL/UTI
EMPBRE ALL/UTI
ENDOSP ALL
ENDONANA ALL
ENTAS ALL
ENTCO ALL
ENTADISP ALL
ENTAGING ALL
ENTAHART ALL
ENTHI ALL
ENTAHISDIS ALL
ENTAPOLE ALL
ESP ALL/MBI/UTI
EA*1 ALL/MBI/UTI
PANAG*2 ALL/MBI/UTI
PANAG*1 ALL/MBI/UTI
ENTAU ALL/MBI/UTI
ENTAB ALL/MBI/UTI
ENTCAN ALL/MBI/UTI
ENC ALL/MBI/UTI
ENCCX ALL/MBI/UTI
ENTEDISS ALL/MBI/UTI
ENTECOWA*1 ALL/MBI/UTI
ENTEDISS*2 ALL/MBI/UTI
ENTGE*1 ALL/MBI/UTI
HA*1 ALL/MBI/UTI
ENTHO ALL/MBI/UTI
KLUINTE*1 ALL/MBI/UTI
ENTEKOBE ALL/MBI/UTI
SL*1 ALL/MBI/UTI
ENTELUDW ALL/MBI/UTI
ENTENIMI*2 ALL/MBI/UTI
ENTEPYRI*1 ALL/MBI/UTI
ENOT ALL/MBI/UTI
ENTER ALL
ENTSP ALL/MBI/UTI
ENTEASIN ALL/MBI/UTI
ENTA ALL/MBI/UTI
ENTECANI ALL/MBI/UTI
ENTCA ALL/MBI/UTI
ENTECECO ALL/MBI/UTI
ENTDI ALL/MBI/UTI
ENTD ALL/MBI/UTI
ENTFS ALL/MBI/UTI
ENTFM ALL/MBI/UTI
ENTCA*1 ALL/MBI/UTI
ENTGA ALL/MBI/UTI
ENTEGILV ALL/MBI/UTI
ENTEHAEM ALL/MBI/UTI
ENTEHERM ALL/MBI/UTI
ENTHR ALL/MBI/UTI
ENTEITAL ALL/MBI/UTI
ENTMA ALL/MBI/UTI
ENTEMORA ALL/MBI/UTI
ENTMU ALL/MBI/UTI
ENTEPALL ALL/MBI/UTI
ENTEPHOE ALL/MBI/UTI
ENTPS ALL/MBI/UTI
ENTRA ALL/MBI/UTI
ENTERATT ALL/MBI/UTI
ENTESACC ALL/MBI/UTI
ENTEITAL*1 ALL/MBI/UTI
LACTGARV*2 ALL/UTI
TETRSOLI*1 ALL/MBI/UTI
ENTESULF ALL/MBI/UTI
ENTEVILL ALL/MBI/UTI
ENTESP ALL
ECO157 ALL/UTI
ENTERSP ALL
ENTERHOM ALL
ECEP ALL/UTI
ENTRO ALL
HEPA*1 ALL
CONID*1 ALL
CONIDCOR*1 ALL
EPICSP ALL
EPIDE ALL
EBV*1 ALL
ERWSP ALL/UTI
PANANAN*1 ALL/MBI/UTI
ENTCAN*2 ALL/MBI/UTI
ENTEDISS*1 ALL/MBI/UTI
PANAG*3 ALL/MBI/UTI
ENTENIMI*1 ALL/MBI/UTI
ERWPERS ALL/UTI
PANANAN*2 ALL/MBI/UTI
ERYSP ALL/UTI
ERYINOP ALL/UTI
ERYRH*1 ALL/UTI
ERYRH ALL/UTI
ERYTONS ALL/UTI
ESCSP ALL/MBI/UTI
LECAD*1 ALL/MBI/UTI
ESCALB ALL/MBI/UTI
EC ALL/MBI/UTI
ESCFE ALL/MBI/UTI
ESCHE ALL/MBI/UTI
ESCVU ALL/MBI/UTI
EUBSP ALL/MBI/UTI
COLAER*1 ALL/MBI/UTI
PSALA*1 ALL/MBI/UTI
EUBBARK ALL/MBI/UTI
EUBBIFO ALL/MBI/UTI
EUBBR ALL/MBI/UTI
EUBBUDA ALL/MBI/UTI
EUBBUDA*1 ALL/MBI/UTI
EUBCALL ALL/MBI/UTI
EUBCM ALL/MBI/UTI
EUBCN ALL/MBI/UTI
EUBCYLI ALL/MBI/UTI
EUBDOLI ALL/MBI/UTI
EUBELIG ALL/MBI/UTI
SLACEXIG*1 ALL/MBI/UTI
ATOFOSS*1 ALL/MBI/UTI
EUBHADR ALL/MBI/UTI
EUBHALL ALL/MBI/UTI
EUBINFI ALL/MBI/UTI
EUBLE*1 ALL/MBI/UTI
EUBLI ALL/MBI/UTI
EUBMINU ALL/MBI/UTI
EUBMO ALL/MBI/UTI
EUBNI ALL/MBI/UTI
EUBNO ALL/MBI/UTI
FLAVPLAU*2 ALL/MBI/UTI
EUBRAMU ALL/MBI/UTI
EUBRECT ALL/MBI/UTI
EUBSA ALL/MBI/UTI
EUBSAPH ALL/MBI/UTI
EUBSIRA ALL/MBI/UTI
EUBSUL ALL/MBI/UTI
EUBTE ALL/MBI/UTI
MOGTIM*1 ALL/MBI/UTI
EUBVENT ALL/MBI/UTI
EUBYU ALL/MBI/UTI
EWISP ALL/MBI/UTI
EWIAM ALL/MBI/UTI
EXIGSP ALL/CC/UTI
EXIGACET ALL/CC/UTI
EXOPSP ALL
EXOPBERG ALL
WANGDERM*4 ALL
EXOPJEAN ALL
EXOPSPIN ALL
EXOPWERN ALL
EXSESP ALL
EXSEROST ALL
CF*3
ALL/MBI/UTI
ENC*5
ALL/MBI/UTI
EC*1 ALL/MBI/UTI
KO*1 ALL/MBI/UTI
KP*4
ALL/MBI/UTI
PM*2 ALL/MBI/UTI
SHIGD*2 ALL/UTI
FACKSP ALL/UTI
FACKHOMI ALL/UTI
FACKIGNA ALL/UTI
FACKLANG ALL/UTI
FACKSOUR ALL/UTI
FACKTABA ALL/UTI
FAECSP ALL/MBI/UTI
FAECPRAU ALL/MBI/UTI
MOBMU*1 ALL/UTI
MOBCU*1 ALL/UTI
FILISP ALL/MBI/UTI
FILALO ALL/MBI/UTI
FILVIL ALL/MBI/UTI
FINESP ALL/MBI/UTI
FINMAG ALL/MBI/UTI
SARINK*5 ALL
PSORY*1 ALL/UTI
FLAVI ALL
FLASP ALL/UTI
MICRARBO*1 ALL/CC/UTI
CHRIND*3 ALL/UTI
EMPBRE*1 ALL/UTI
FLADEVO ALL/UTI
CHRGLE*1 ALL/UTI
PEDOHEPA*2 ALL/UTI
CHRIND*2 ALL/UTI
MICRMARI*1 ALL/CC/UTI
MICRMARI*2 ALL/CC/UTI
ELIZME*1 ALL/UTI
SPHMI ALL/UTI
SPHMU*2 ALL/UTI
MYROD*1 ALL/UTI
SPMPA*1 ALL/UTI
SPHST*1 ALL/UTI
SPHTH*1 ALL/UTI
SPHST*2 ALL/UTI
FLAVSP ALL/MBI/UTI
FLAVPLAU ALL/MBI/UTI
FLUOSP ALL/UTI
LEGBOZE*1 ALL/UTI
FLDUM*1 ALL/UTI
LEGGO*1 ALL/UTI
FONSE ALL
FONSECOM ALL
FONSECOM*1 ALL
WANGDERM*5 ALL
FONSEPED ALL
FRASP ALL/UTI
FRATU ALL/UTI
FUNG ALL
FUSAR ALL
FUSARCHLA ALL
FUSARCULM ALL
FUSARDIME ALL
FUSARGRAM ALL
FUSARSOLA*1 ALL
FUSARPROL*1 ALL
FUSAROXYS ALL
FUSARPOAE ALL
FUSARPROL ALL
FUSARGRAM*1 ALL
FUSARSEMI ALL
FUSARSOLA ALL
FUSARSPOR ALL
FUSARTRIC*1 ALL
FUSARTRIC ALL
FUSARVERT ALL
NEOSDIMI*1 ALL
FSU ALL/MBI/UTI
FILALO*1 ALL/MBI/UTI
FUSCANI ALL/MBI/UTI
FUSEQUI ALL/MBI/UTI
FUSGO ALL/MBI/UTI
FUSMO ALL/MBI/UTI
FUSNA ALL/MBI/UTI
FUSNC ALL/MBI/UTI
FUSNE ALL/MBI/UTI
FUSND ALL/MBI/UTI
FUSNN ALL/MBI/UTI
FUSNU ALL/MBI/UTI
FUSNS ALL/MBI/UTI
FUSNL ALL/MBI/UTI
FUSNP ALL/MBI/UTI
FUSPE ALL/MBI/UTI
FLAVPLAU*3 ALL/MBI/UTI
FUSNP*1 ALL/MBI/UTI
FAECPRAU*1 ALL/MBI/UTI
FUSRU ALL/MBI/UTI
EUBSUL*1 ALL/MBI/UTI
FUSUL ALL/MBI/UTI
FUSVA ALL/MBI/UTI
GALLSP ALL/UTI
GALLBARN ALL/UTI
GS ALL/UTI
GARSP ALL/UTI
GV ALL/UTI
GEMSP ALL/MBI/UTI
GEMBERG ALL/MBI/UTI
GEMHA ALL/MBI/UTI
GEMMO ALL/MBI/UTI
GEMSANG ALL/MBI/UTI
GEOBSP ALL/UTI
GEOBSTEA ALL/UTI
GEOBTHER ALL/UTI
GEOBTHERM ALL/UTI
GEOTR ALL/MBI
GEOCAN ALL/MBI
GEOTRKLEB ALL/MBI
GEOTRKLEB*1 ALL/MBI
RUBEL*1 ALL
GIARD ALL
GIARDLAMB*2 ALL
GIARDLAMB*1 ALL
GIARDLAMB ALL
CHRYSP*3 ALL
GLIOSP ALL
GLOBSP ALL/UTI
GLOBSANG ALL/UTI
GLOBSULF ALL/UTI
GORDSP ALL/CC/UTI
GORDBRON ALL/CC/UTI
GORDOTIT ALL/CC/UTI
GORDPOLY ALL/CC/UTI
GORDRUBR ALL/CC/UTI
GORDRUBR*1 ALL/CC/UTI
GORDSPUT ALL/CC/UTI
GORDTERR ALL/CC/UTI
GNR ALL/UTI
GNRF ALL/UTI
GNRNF ALL/UTI
GNCB ALL/UTI
GNC ALL/UTI
GNDC ALL/UTI
GNPB ALL/UTI
GPR ALL/UTI
GPCB ALL/UTI
GPC ALL/UTI
GPDC ALL/UTI
GVR ALL/UTI
GVCB ALL/UTI
GVC ALL/UTI
GRANSP ALL/MBI/UTI
GRADJ ALL/MBI/UTI
GRANELEG ALL/MBI/UTI
GRAPSP ALL
GRIMSP ALL/UTI
GRIMHOLL ALL/UTI
HS ALL/UTI
HAEACT*2 ALL/UTI
HAEAEGY ALL/UTI
HAEAP*1 ALL/UTI
HAEHAEM*1 ALL/UTI
HAEDU ALL/UTI
HAEHAEM ALL/UTI
HAEHA ALL/UTI
HIU ALL/UTI
HAEPAH ALL/UTI
HP ALL/UTI
HAEPITT ALL/UTI
AGGRSEGN*1 ALL/UTI
HAFSP ALL/MBI/UTI
HA ALL/MBI/UTI
HALOSP ALL/UTI
HALOVENU ALL/UTI
PICANGU*2 ALL/MBI
PICANA*1 ALL/MBI
CYBEFABI*2 ALL
OGATPOLY*1 ALL
HARTSP ALL
HELCSP ALL/MBI/UTI
HELCKUNZ ALL/MBI/UTI
HELCSUEC ALL/MBI/UTI
HELSP ALL/MBI/UTI
HELACIN ALL/MBI/UTI
HELACIN*1 ALL/MBI/UTI
HELAURA ALL/MBI/UTI
HELBILI ALL/MBI/UTI
HELBIZZ ALL/MBI/UTI
HELCANA ALL/MBI/UTI
HELCANI ALL/MBI/UTI
HELCHOL ALL/MBI/UTI
HELCI ALL/MBI/UTI
HELFELI ALL/MBI/UTI
HELFE ALL/MBI/UTI
HELGANM ALL/MBI/UTI
HELHEPA ALL/MBI/UTI
HELMESO ALL/MBI/UTI
HELMURI ALL/MBI/UTI
HELMU ALL/MBI/UTI
HELPY*2 ALL/MBI/UTI
HELPAME ALL/MBI/UTI
HELPULL ALL/MBI/UTI
HELPY ALL/MBI/UTI
HELRA ALL/MBI/UTI
HELRODE ALL/MBI/UTI
HELSALO ALL/MBI/UTI
HELTROG ALL/MBI/UTI
HELTYPH ALL/MBI/UTI
HELMSP ALL
BIPOAUST*2 ALL
EXSEROST*3 ALL
BIPOHAWA*3 ALL
EXSEROST*2 ALL
BIPOSPIC*5 ALL
BORPE*1 ALL/UTI
HEPA ALL
HB ALL
HEPC ALL
HEPD ALL
HEPE ALL
HEPG ALL
HERBSP ALL/UTI
HERPES ALL
HSV*1 ALL
HETESP ALL
HETEHETE ALL
HOLDSP ALL/UTI
HOLDFILI ALL/UTI
WANGDERM*2 ALL
CLADO*1 ALL
WANGDERM*3 ALL
HORMSP ALL
HORMDERM ALL
EXOPWERN*4 ALL
CMV*1 ALL
ADV ALL
CORTU ALL
COX ALL
COXA ALL
COXB ALL
CMV ALL
ECHOV ALL
HSV ALL
HSV1 ALL
HSV2 ALL
VZ ALL
EBV ALL
HHV6 ALL
HHV8 ALL
HIV2 ALL
HIV1 ALL
HMPV ALL
PAPHW ALL
PFLU ALL
POLIO ALL
RSV ALL
RHINOV ALL
HTLV1 ALL
HTLV2 ALL
TAENI*1 ALL
HYMEN ALL
IGNASP ALL/UTI
IGNARUOF ALL/UTI
FLUA ALL
H1N1 ALL
FLUB ALL
FLUC ALL
FLU ALL
INQUSP ALL/UTI
INQULIMO ALL/UTI
ISOSP ALL
JANISP ALL/CC/UTI
JANIHOYL ALL/CC/UTI
JC ALL
JONSP ALL/UTI
JONDE ALL/UTI
KERSSP ALL/UTI
KERSGYIO ALL/UTI
KINSP ALL/UTI
KINDE ALL/UTI
SUTIND*1 ALL/UTI
KINKI ALL/UTI
KINORAL ALL/UTI
KINPOTU ALL/UTI
KS ALL/MBI/UTI
EA ALL/MBI/UTI
KLEGRA ALL/MBI/UTI
RAOORN*1 ALL/MBI/UTI
KO ALL/MBI/UTI
KLEOZ*1 ALL/MBI/UTI
RAOPLA*1 ALL/MBI/UTI
KP ALL/MBI/UTI
KLEOZ ALL/MBI/UTI
KLEPNE ALL/MBI/UTI
KLERH ALL/MBI/UTI
KLERH*1 ALL/MBI/UTI
KLESING ALL/MBI/UTI
RAOTER*1 ALL/MBI/UTI
RAOPLA*2 ALL/MBI/UTI
KLEVARI ALL/MBI/UTI
KLOESP ALL
KLUSP ALL/MBI/UTI
KLUAS ALL/MBI/UTI
KLUCR ALL/MBI/UTI
KLUGEOR ALL/MBI/UTI
KLUINTE ALL/MBI/UTI
KLUYSP ALL/MBI
KLUYMAR*3 ALL/MBI
KLUYLAC ALL/MBI
KLUYMAR ALL/MBI
KOCSP ALL/CC/UTI
KOCROS*2 ALL/CC/UTI
KOCKRI ALL/CC/UTI
KOCROS ALL/CC/UTI
KOCVAR ALL/CC/UTI
KODASP ALL
PICOHM ALL
KOSASP ALL/MBI/UTI
ENTECOWA ALL/MBI/UTI
YOKRE*2 ALL/MBI/UTI
KROPSP ALL/UTI
KROPEBUR ALL/UTI
KURSP ALL/UTI
KURBE ALL/UTI
KYTSP ALL/CC/UTI
KYSED ALL/CC/UTI
LACHASP ALL
LACHAFERM ALL
LACHSP ALL/UTI
LACHORAL ALL/UTI
LS ALL/MBI/UTI
LACAC ALL/MBI/UTI
LACAM ALL/MBI/UTI
LACANTR ALL/MBI/UTI
LACPLAN*1 ALL/MBI/UTI
LACBRE ALL/MBI/UTI
LACBUCH ALL/MBI/UTI
LACCS ALL/MBI/UTI
LACCA*2 ALL/MBI/UTI
LACFER*1 ALL/MBI/UTI
WEISCONF*1 ALL/MBI/UTI
LACCR ALL/MBI/UTI
LACDELB ALL/MBI/UTI
LACFER ALL/MBI/UTI
LACGA ALL/MBI/UTI
LACGAST ALL/MBI/UTI
LACINER ALL/MBI/UTI
LACJEN ALL/MBI/UTI
LACJO ALL/MBI/UTI
LACKALI ALL/MBI/UTI
ATOMIN*1 ALL/MBI/UTI
LACOR ALL/MBI/UTI
LACPARA ALL/MBI/UTI
LACPLAN ALL/MBI/UTI
LACREUT ALL/MBI/UTI
LACRHAM ALL/MBI/UTI
ATORIM*1 ALL/MBI/UTI
LACSAKE ALL/MBI/UTI
LACSALI ALL/MBI/UTI
LACULTU ALL/MBI/UTI
LACVA ALL/MBI/UTI
LACVITU ALL/MBI/UTI
LACTSP ALL/UTI
LACTGARV ALL/UTI
LACTLACT ALL/UTI
LASISP ALL
LASITHEO ALL
LASA ALL
LECSP ALL/MBI/UTI
LECAD ALL/MBI/UTI
LECYSP ALL
LECYHOFF ALL
LECYMUTA ALL
LEGS ALL/UTI
LEGADEL ALL/UTI
LEGAN ALL/UTI
LEGBELI ALL/UTI
LEGBI ALL/UTI
LEGBOZE ALL/UTI
LEGBR ALL/UTI
LEGBUSA ALL/UTI
LEGCH ALL/UTI
LEGCI ALL/UTI
LEGDRAN ALL/UTI
LEGDROZ ALL/UTI
FLDUM ALL/UTI
LEGER ALL/UTI
LEGFAIR ALL/UTI
LEGFALL ALL/UTI
LEGFE ALL/UTI
LEGGE ALL/UTI
LEGGO ALL/UTI
LEGHA ALL/UTI
LEGIS ALL/UTI
LEGJA ALL/UTI
LEGJO ALL/UTI
LEGLANS ALL/UTI
LEGLO ALL/UTI
LEGLB ALL/UTI
LEGLYTI ALL/UTI
TATMAC ALL/UTI
TATMIC ALL/UTI
LEGMO ALL/UTI
LEGNA ALL/UTI
LEGOK ALL/UTI
LEGPA ALL/UTI
TATMIC*2 ALL/UTI
LP ALL/UTI
LEGQA ALL/UTI
LEGQI ALL/UTI
LEGROWB ALL/UTI
LEGRU ALL/UTI
LEGSH ALL/UTI
LEGSA ALL/UTI
LEGSK ALL/UTI
LEGSP ALL/UTI
LEGST ALL/UTI
LEGTAUR ALL/UTI
LEGTU ALL/UTI
LEGWA ALL/UTI
LEGWALT ALL/UTI
LEGWO ALL/UTI
LEIFSP ALL/CC/UTI
LEIFAQUA ALL/CC/UTI
LEIFXYLI ALL/CC/UTI
LEISH ALL
LELLSP ALL/MBI/UTI
ENTAU*1 ALL/MBI/UTI
ENTENIMI ALL/MBI/UTI
LEMSU ALL/MBI/UTI
LEMGR ALL/MBI/UTI
LEMRI ALL/MBI/UTI
LEPTSP ALL
LEPTSENE ALL
LEPTTOMP ALL
LEPSP ALL/UTI
LEPIN ALL/UTI
LEPTS ALL/MBI/UTI
EUBSA*1 ALL/MBI/UTI
LEPTB ALL/MBI/UTI
LEPTGOOD ALL/MBI/UTI
LEPTTREV ALL/MBI/UTI
LEPTWADE ALL/MBI/UTI
LEUC ALL/MBI/UTI
LEUCI*1 ALL/MBI/UTI
LEUCI ALL/MBI/UTI
LEULA ALL/MBI/UTI
LEUME ALL/MBI/UTI
LEUPS ALL/MBI/UTI
CITAM*1 ALL/MBI/UTI
CITKO*2 ALL/MBI/UTI
LISSP ALL/UTI
JONDE*1 ALL/UTI
LISGR ALL/UTI
LISTIN ALL/UTI
LISIVAN ALL/UTI
LM ALL/UTI
LISSEE ALL/UTI
LISWELS ALL/UTI
LISTSP ALL/UTI
LOBOA ALL
LODDSP ALL
LODDELON ALL
VIBHAR*2 ALL/UTI
LCM ALL
MACSP ALL/UTI
MACBOVI ALL/UTI
MACCARO ALL/UTI
MACCAS ALL/UTI
MACEQUI ALL/UTI
ALTER*1 ALL
MADUR ALL
MADUGRIS ALL
MADUMYCE ALL
MADUMYCE*1 ALL
MALAS ALL
MALFUR ALL
MALGLOB ALL
MALFUR*3 ALL
MALPAC ALL
MALREST ALL
MALSYMP ALL
MALBSP ALL
MANNSP ALL/UTI
PASHE ALL/UTI
MARB ALL
MASSSP ALL/UTI
MASSTIMO ALL/UTI
MASTSP ALL
MEASL ALL
MEGASP ALL/MBI/UTI
MEGAHYPE ALL/MBI/UTI
MEGAHYPE*1 ALL/MBI/UTI
MEGSP ALL/MBI/UTI
MEGEL ALL/MBI/UTI
METASP ALL
METAANIS ALL
SA*4 ALL/UTI
METSP ALL/UTI
METME ALL/UTI
METZATM ALL/UTI
MEYESP ALL
PICGUIL ALL
MICRSP ALL/CC/UTI
MICRARBO ALL/CC/UTI
MICRHYDR ALL/CC/UTI
MICRIMPE ALL/CC/UTI
MICRLACT ALL/CC/UTI
MICRLIQU ALL/CC/UTI
MICRMARI ALL/CC/UTI
MICROXYD ALL/CC/UTI
MICRPARA ALL/CC/UTI
MICRRESI ALL/CC/UTI
MICG ALL/CC/UTI
MICANT ALL/CC/UTI
MICLUT*3 ALL/CC/UTI
NESTHALO*1 ALL/UTI
KOCKRI*1 ALL/CC/UTI
MICLUT ALL/CC/UTI
MICLYL ALL/CC/UTI
MICLUT*1 ALL/CC/UTI
PEPNI*1 ALL/UTI
MICNIS ALL/CC/UTI
KOCROS*1 ALL/CC/UTI
KYSED*1 ALL/CC/UTI
MICROMSP ALL/UTI
MICROMCHAL ALL/UTI
NOCBREV*1 ALL/UTI
MICROSP ALL
MICRO ALL
SARINK*4 ALL
MITSP ALL/MBI/UTI
PREDEN*1 ALL/MBI/UTI
MITML ALL/MBI/UTI
MOBSP ALL/UTI
MOBCU ALL/UTI
MOBMU ALL/UTI
MOESP ALL/MBI/UTI
MOEWI ALL/MBI/UTI
MOGSP ALL/MBI/UTI
MOGDIVE ALL/MBI/UTI
MOGNEGL ALL/MBI/UTI
MOGTIM ALL/MBI/UTI
MOGVESC ALL/MBI/UTI
MOLD ALL
MCV ALL
POXMO ALL
SCEDAPIO*1 ALL
MOS ALL/UTI
RIEMANAT*1 ALL/UTI
MORAT ALL/UTI
MORBOEV ALL/UTI
MORBO ALL/UTI
MORCANI ALL/UTI
MORCAPR ALL/UTI
MORCA ALL/UTI
MORCUNI ALL/UTI
KINKI*1 ALL/UTI
KINKI*2 ALL/UTI
MORLA ALL/UTI
MORLINC ALL/UTI
MORLA*3 ALL/UTI
MORNL ALL/UTI
MOROBLO ALL/UTI
MOROS ALL/UTI
MOROVIS ALL/UTI
PSYPHEN*1 ALL/UTI
OLIUT*1 ALL/UTI
MORBSP ALL
MORSP ALL/MBI/UTI
MORMO ALL/MBI/UTI
MORSI ALL/MBI/UTI
MORTSP ALL
MORTWOLF ALL
MUCSP ALL
MUCCIRC ALL
MUCHIEM ALL
MUCCIRC*1 ALL
MUCCIRC*2 ALL
RHIZMPUS*1 ALL
MUCRACE ALL
MUCRA ALL
MUCROUX ALL
ALCXYL*2 ALL/UTI
ACS*1 ALL/UTI
ENTAB*2 ALL/MBI/UTI
KP*2 ALL/MBI/UTI
MORMO*1 ALL/MBI/UTI
PA*2 ALL/UTI
ENC*3 ALL/MBI/UTI
PM*1 ALL/MBI/UTI
MUMPS ALL
MYCESTER ALL
MYCSP ALL/UTI
MYCAB ALL/UTI
MYCAF ALL/UTI
MYCAGRI ALL/UTI
MYCAICH ALL/UTI
MYCAL ALL/UTI
MYCGO*1 ALL/UTI
MYCAS ALL/UTI
MYCAU ALL/UTI
MYCAUST ALL/UTI
MYSCP ALL/UTI
MYCAV*2 ALL/UTI
MYCMA*1 ALL/UTI
MYCBOEN ALL/UTI
MYCBOHE ALL/UTI
MYCBO ALL/UTI
MYCBRAN ALL/UTI
MYCBRIS ALL/UTI
MYCBRUM ALL/UTI
MYCIN*1 ALL/UTI
MYCCANA ALL/UTI
MYCCAN ALL/UTI
MYCCAPR ALL/UTI
MYCCELA ALL/UTI
MYCCH ALL/UTI
MYCCHES ALL/UTI
MYCCHIT ALL/UTI
MYCCHLO ALL/UTI
MYCCHUB ALL/UTI
MYCCO ALL/UTI
MYCCONS ALL/UTI
MYCCOOK ALL/UTI
MYCCOS ALL/UTI
MYCDIER ALL/UTI
MYCDORI ALL/UTI
MYCDUVA ALL/UTI
MYCELEP ALL/UTI
MYCFALL ALL/UTI
MYCFARC ALL/UTI
MYCFL ALL/UTI
MYCFOR ALL/UTI
MYCFC ALL/UTI
MYCFC*1 ALL/UTI
MYCFRED ALL/UTI
MYCGADI ALL/UTI
MYCGA ALL/UTI
MYCGN ALL/UTI
MYCFOR*1 ALL/UTI
MYCGILV ALL/UTI
MYCGOO ALL/UTI
MYCGO ALL/UTI
MYCSI*1 ALL/UTI
MYCHA ALL/UTI
MYCHASS ALL/UTI
MYCHECK ALL/UTI
MYCHEID ALL/UTI
MYCHIBE ALL/UTI
MYCHODL ALL/UTI
MYCHOLS ALL/UTI
MYCHOUS ALL/UTI
MYCIMMU ALL/UTI
MYCINTE ALL/UTI
MYCBINTE ALL/UTI
MYCIN ALL/UTI
MYCPARAT*1 ALL/UTI
MYCKA ALL/UTI
MYCKOMO ALL/UTI
MYCKUBI ALL/UTI
MYCLACT ALL/UTI
MYCLACU ALL/UTI
MYCLENT ALL/UTI
MYCLE ALL/UTI
MYCKA*1 ALL/UTI
MYCMADA ALL/UTI
MYCMAGE ALL/UTI
MYCML ALL/UTI
MYCMA ALL/UTI
MYCMIC ALL/UTI
MYCFOR*2 ALL/UTI
MYCMONT ALL/UTI
MYCMORI ALL/UTI
MYCMUC ALL/UTI
MYCMURA ALL/UTI
MYCNEOA ALL/UTI
MYCNEWO ALL/UTI
MYCNO ALL/UTI
MYCNOVO ALL/UTI
MYCOBUE ALL/UTI
MYCPALU ALL/UTI
MYCPARA ALL/UTI
MYCPAR ALL/UTI
MYCPARAT ALL/UTI
MYCPARM ALL/UTI
MYCPERE ALL/UTI
MYCPH ALL/UTI
MYCPHO ALL/UTI
MYCPINN ALL/UTI
MYCMA*2 ALL/UTI
MYCPORC ALL/UTI
MYCPSYC ALL/UTI
MYCRHOD ALL/UTI
MYCSC ALL/UTI
MYCSEPT ALL/UTI
MYCSHER ALL/UTI
MYCSH ALL/UTI
MYCSHOT ALL/UTI
MYCSI ALL/UTI
MYCSM ALL/UTI
MYCSPHA ALL/UTI
MYCSZ ALL/UTI
MYCTE ALL/UTI
MYCTERR ALL/UTI
MYCTH ALL/UTI
MYCTOKA ALL/UTI
MYCTRIP ALL/UTI
MYCTR ALL/UTI
TB ALL/UTI
TBCX ALL/UTI
MYCTUSC ALL/UTI
MYCUL ALL/UTI
MYCVA ALL/UTI
MYCVANB ALL/UTI
MYCWOLI ALL/UTI
MYCXE ALL/UTI
MYCAV ALL/UTI
MYCS ALL/UTI
MYCBU ALL/UTI
MYCFA ALL/UTI
MYCFE ALL/UTI
MYCGE ALL/UTI
MYCHO ALL/UTI
MYCFE*1 ALL/UTI
MYCLI ALL/UTI
MYCOR ALL/UTI
MYCPE ALL/UTI
MYCPIRU ALL/UTI
MP ALL/UTI
MYCPR ALL/UTI
MYCSA ALL/UTI
MYCSR ALL/UTI
CANLIP*2 ALL/MBI
MRYSP ALL/UTI
MYROD ALL/UTI
NAEGL ALL
PICSP*1 ALL/MBI
ARTHSP*1 ALL
NECAT ALL
NS ALL/UTI
NEICA ALL/UTI
MORCA*2 ALL/UTI
NEICI ALL/UTI
MORCUNI*1 ALL/UTI
NEIDENT ALL/UTI
NEIEL ALL/UTI
NEIELOELO ALL/UTI
NEIELOGLY ALL/UTI
NEINI ALL/UTI
NEIFL ALL/UTI
GC ALL/UTI
NEIIGUA ALL/UTI
NEILA ALL/UTI
NEIMACA ALL/UTI
NM ALL/UTI
NEIMU ALL/UTI
NEISORAL ALL/UTI
MOROVIS*2 ALL/UTI
NEIPA*1 ALL/UTI
NEISPERF ALL/UTI
NEIPO ALL/UTI
NEISI ALL/UTI
NEISU ALL/UTI
NEIPA ALL/UTI
NEORSP ALL/UTI
NEORSENN ALL/UTI
NEOSP ALL
NEOFISC ALL
NEOSDIMI ALL
NESTSP ALL/UTI
NESTHALO ALL/UTI
NIGRSP ALL
NOCSP ALL/UTI
NOCABSC ALL/UTI
NOCAFRI ALL/UTI
NOCANAE
ALL/UTI
NOCAOBE ALL/UTI
NOCARAO ALL/UTI
NOCARTH ALL/UTI
NOCASIA ALL/UTI
NOCAS ALL/UTI
NOCASTE ALL/UTI
NOCBEIJ ALL/UTI
NOCBR ALL/UTI
NOCBREV ALL/UTI
NOCCARN ALL/UTI
NOCOC*2 ALL/UTI
NOCCYRI ALL/UTI
NOCELEG ALL/UTI
NOCFARC ALL/UTI
NOCHIGO ALL/UTI
NOCINOH ALL/UTI
NOCKRUC ALL/UTI
NOCMEXI
ALL/UTI
NOCNIIG ALL/UTI
NOCNOVA ALL/UTI
AMYCORIE*1 ALL/UTI
NOCOC*3 ALL/UTI
NOCOC ALL/UTI
NOCPAUC ALL/UTI
NOCPNEU ALL/UTI
NOCPSEU ALL/UTI
NOCSIEN ALL/UTI
NOCTEST ALL/UTI
NOCTRAN ALL/UTI
NOCVETE ALL/UTI
NOCYAMA ALL/UTI
NOCASP ALL/UTI
NOCADASS ALL/UTI
NOCASYNN ALL/UTI
NORO ALL
PARNR ALL
NVS ALL/MBI/UTI
OBPSU ALL/MBI/UTI
OBESPROT ALL/MBI/UTI
OCHSP ALL/UTI
OCHAN ALL/UTI
OCHINTE ALL/UTI
OCHRSP ALL
OCHRCONS ALL
OCHRGALL ALL
OCHRGALL*1 ALL
SCOLHUMI*1 ALL
BACSPP ALL/MBI/UTI
BACSP ALL/MBI/UTI
OERSP ALL/CC/UTI
OGATSP ALL
PICANGU*1 ALL/MBI
OGATPOLY ALL
ARTHRSP*1 ALL
OLISP ALL/UTI
OLIUR ALL/UTI
OLIUT ALL/UTI
GEOCAN*1 ALL/MBI
ORBI ALL
POXOR ALL
ORISP ALL/UTI
ORTSU ALL/UTI
REOTU ALL
PAECSP ALL
PAECJAVA ALL
PAECLILA ALL
PAECMARQ ALL
PAECVARI ALL
PAESP ALL/CC/UTI
PAEAGAR ALL/CC/UTI
PAEALV ALL/CC/UTI
BEDAP ALL/CC/UTI
PAEVALI*1 ALL/CC/UTI
PAELARV ALL/CC/UTI
PAELENT ALL/CC/UTI
PAEMAC ALL/CC/UTI
PAEPABU ALL/CC/UTI
PAEPOL ALL/CC/UTI
PAEPOPI ALL/CC/UTI
PAEPROV ALL/CC/UTI
PAETHIA ALL/CC/UTI
PAEURIN ALL/CC/UTI
PAEVALI ALL/CC/UTI
PANDSP ALL/UTI
PANDAPIS ALL/UTI
PANDNORI ALL/UTI
PANDPNOM ALL/UTI
PANDPULM ALL/UTI
PANDSPUT ALL/UTI
PANOT ALL/MBI/UTI
PANAG ALL/MBI/UTI
PANANAN*3 ALL/MBI/UTI
PANANAN ALL/MBI/UTI
PANDI ALL/MBI/UTI
PARASP ALL/MBI/UTI
BACDT ALL/MBI/UTI
PARAGOLD ALL/MBI/UTI
BACMR ALL/MBI/UTI
PARABSP ALL/UTI
BURFUNG ALL/UTI
PARSP ALL/UTI
PARYEE ALL/UTI
PARASSP ALL/UTI
PARADENT ALL/UTI
PARVSP ALL/UTI
PARVMICR ALL/UTI
PARTU ALL
PASSP ALL/UTI
PASAE ALL/UTI
PASBE ALL/UTI
PASCABA ALL/UTI
PASCA ALL/UTI
PASDA ALL/UTI
PASHE*1 ALL/UTI
PASMU ALL/UTI
PASMG ALL/UTI
PASMM ALL/UTI
PASMS ALL/UTI
PASPN ALL/UTI
PASSTOM ALL/UTI
ACURE*1 ALL/UTI
PATUSP ALL/UTI
PECSP ALL/UTI
LICE ALL
PEDSP ALL/UTI
PEDAC ALL/UTI
PEDPE ALL/UTI
AEURQ*1 ALL/CC/UTI
PEDOSP ALL/UTI
PEDOHEPA ALL/UTI
PEDOPISC ALL/UTI
PENIC ALL
PENICITR ALL
PENICOMM ALL
PENIDECU ALL
PENIEXPA ALL
PENIGRIS ALL
PAECLILA*1 ALL
PENIMARN ALL
PENIGRIS*1 ALL
PENIPUBE ALL
TALARUBE*1 ALL
PENISPIN ALL
PENIVERR ALL
PENIVIRI ALL
PSU ALL/UTI
PEPTASAC*2 ALL/MBI/UTI
PEPNI ALL/UTI
STASL*1 ALL/CC/UTI
PEPTSP ALL/MBI/UTI
PEPTASAC ALL/MBI/UTI
PEPTHARE ALL/MBI/UTI
PEPTIVOR ALL/MBI/UTI
PEPTLACR ALL/MBI/UTI
PSS ALL/MBI/UTI
PSA ALL/MBI/UTI
PEPTASAC*1 ALL/MBI/UTI
MEGEL*1 ALL/MBI/UTI
PPSHY*1 ALL/MBI/UTI
ANALAC*1 ALL/MBI/UTI
FINMAG*1 ALL/MBI/UTI
PARVMICR*1 ALL/MBI/UTI
ANAOCTA*1 ALL/MBI/UTI
ATOPAR*1 ALL/MBI/UTI
ANAPRE*1 ALL/MBI/UTI
BLAUPROD*2 ALL/MBI/UTI
ANATET*1 ALL/MBI/UTI
ANAVAG*1 ALL/MBI/UTI
PSEBOY*1 ALL
PSEBOY*4 ALL
PHAESP ALL
PHAEPARA ALL
PHAEOSP ALL
EXOPWERN*2 ALL
EXOPWERN*5 ALL
PHASP ALL
PHAEX ALL
PHIASP ALL
PHIACURV ALL
PHIADIMO ALL
PHIAOBOV ALL
LECYMUTA*1 ALL
PHIAL ALL
PHIAAMER
ALL
FONSECOM*2 ALL
FONSECOM*3 ALL
WANGDERM*1 ALL
PHIAEURO
ALL
EXOPJEAN*2 ALL
LECYHOFF*1 ALL
EXOPJEAN*1 ALL
FONSEPED*1 ALL
PLEURICH*1 ALL
EXOPSPIN*1 ALL
PHIAVERR ALL
PHOMA ALL
PHOSP ALL/UTI
PHODAM ALL/UTI
PHOTSP ALL/UTI
PHOTASYM ALL/UTI
XENLU ALL/UTI
PHOTTEMP ALL/UTI
PICSP ALL/MBI
PICANGU ALL/MBI
PICANA ALL/MBI
CYBEFABI*3 ALL
PICFAR ALL/MBI
PICGUIL*1 ALL
PICKUDR ALL/MBI
PICOHM*1 ALL
PICPOL*1 ALL
PICTU ALL
PIEDR ALL
PIEDHORT ALL
PITHSP ALL
MALAS*1 ALL
MALPAC*1 ALL
MALFUR*1 ALL
MALFUR*2 ALL
MALFUR*4 ALL
MALPAC*2 ALL
PLASP ALL
PLAFA ALL
PLAKNOW ALL
PLAMA ALL
PLAOV ALL
PLAVI ALL
PLESP ALL/UTI
PLESH ALL/UTI
PLEUSP ALL
PLEURICH ALL
PLURSP ALL/MBI/UTI
ENTGE ALL/MBI/UTI
ENTEPYRI ALL/MBI/UTI
POLYOMA ALL
PORSP ALL/MBI/UTI
PORAS ALL/MBI/UTI
PORCANG ALL/MBI/UTI
PORCANO ALL/MBI/UTI
PORCANS ALL/MBI/UTI
PORCATO ALL/MBI/UTI
PORCIRC ALL/MBI/UTI
PORCREV ALL/MBI/UTI
POREN ALL/MBI/UTI
PORGI ALL/MBI/UTI
PORGING ALL/MBI/UTI
PORGULA ALL/MBI/UTI
PORLE ALL/MBI/UTI
PORSA ALL/MBI/UTI
PORSA*3 ALL/MBI/UTI
PORSOME ALL/MBI/UTI
POXTU ALL
PRASP ALL/UTI
PRAFO ALL/UTI
PRESP ALL/MBI/UTI
PREBI ALL/MBI/UTI
PREBC ALL/MBI/UTI
PREBU ALL/MBI/UTI
PRECO ALL/MBI/UTI
PREDEN ALL/MBI/UTI
PREDE ALL/MBI/UTI
PREDI ALL/MBI/UTI
PREENOE ALL/MBI/UTI
PREHE ALL/MBI/UTI
PREIN ALL/MBI/UTI
PRELO ALL/MBI/UTI
PREMARS ALL/MBI/UTI
PREM ALL/MBI/UTI
PREMULT ALL/MBI/UTI
PREMULTI ALL/MBI/UTI
PRENI ALL/MBI/UTI
PREOR ALL/MBI/UTI
PREORAL ALL/MBI/UTI
PREOS ALL/MBI/UTI
PREOU*2 ALL/MBI/UTI
PREOU ALL/MBI/UTI
PREPALL ALL/MBI/UTI
PRERU ALL/MBI/UTI
PRESALI ALL/MBI/UTI
PRESHAH ALL/MBI/UTI
PRETANN ALL/MBI/UTI
PREVE ALL/MBI/UTI
PREZO*1 ALL/MBI/UTI
PRPG ALL/CC/UTI
PRPA ALL/CC/UTI
PRPAC*6 ALL/CC/UTI
PRPAU ALL/CC/UTI
PROAV ALL/CC/UTI
PRPCY ALL/CC/UTI
PRPF ALL/CC/UTI
PROGR ALL/CC/UTI
PFI*1 ALL/CC/UTI
PRPJE ALL/CC/UTI
PRPLY ALL/CC/UTI
PRPMI ALL/CC/UTI
PRPPR ALL/CC/UTI
PRPRO ALL/CC/UTI
PRPTH*1 ALL/CC/UTI
PRPTH ALL/CC/UTI
PROPISP ALL/CC/UTI
PFI ALL/CC/UTI
PROPSP ALL/UTI
PROPLYMP ALL/UTI
PTS ALL/MBI/UTI
PROTHAUS ALL/MBI/UTI
PRVAL*1 ALL/MBI/UTI
PM ALL/MBI/UTI
PRTMY ALL/MBI/UTI
PRTPE ALL/MBI/UTI
PR*2 ALL/MBI/UTI
PV ALL/MBI/UTI
PROTO ALL
SARINK*2 ALL
PROWIC ALL
PROZOP ALL
PROTOZOAN ALL
PRU ALL/MBI/UTI
PRVAL ALL/MBI/UTI
PRVRU*2 ALL/MBI/UTI
PRVHE ALL/MBI/UTI
PR ALL/MBI/UTI
PRVRU ALL/MBI/UTI
PRS ALL/MBI/UTI
PSASP ALL
PSEBOY ALL
PSASP*1 ALL
PSEBOY*3 ALL
PSEUDOCSP ALL/UTI
PSEFSP ALL/MBI/UTI
PSEFCAPI ALL/MBI/UTI
PSP ALL/UTI
DELFAC*2 ALL/UTI
PA ALL/UTI
PSEAL ALL/UTI
BURGL*1 ALL/UTI
BURGL*2 ALL/UTI
STEMA*5 ALL/UTI
STEMA*2 ALL/UTI
BURCE*1 ALL/UTI
PST*3 ALL/UTI
PSECH ALL/UTI
BURGL*3 ALL/UTI
ACDEL*1 ALL/UTI
BREDIM*1 ALL/UTI
ACIDFACI*1 ALL/UTI
PF ALL/UTI
BURGL*4 ALL/UTI
CHSLU*1 ALL/UTI
BURMA*1 ALL/UTI
STEMA*1 ALL/UTI
PSEMARG ALL/UTI
PSEMEN ALL/UTI
PSEMONT ALL/UTI
PSEMOSS ALL/UTI
BURCE*2 ALL/UTI
ALFE*2 ALL/UTI
PSORY ALL/UTI
SPMPA*3 ALL/UTI
PST*1 ALL/UTI
PSEPE ALL/UTI
RALPIC*2 ALL/UTI
PSEPS ALL/UTI
BURPM*4 ALL/UTI
PP ALL/UTI
SHEPF*1 ALL/UTI
BURPYRR*1 ALL/UTI
PST ALL/UTI
COMTE*1 ALL/UTI
PSEVERO ALL/UTI
BREVES*1 ALL/UTI
PSEUSP ALL/MBI/UTI
PSALA ALL/MBI/UTI
PSEUDOXSP ALL/UTI
PSEUDOXKORE ALL/UTI
PSEUDSP ALL
PSEUAPHI ALL
PSYCHRSP ALL/UTI
PSYCH ALL/UTI
PSYIM ALL/UTI
PSYPHEN ALL/UTI
AURESP*1 ALL
AUREPULL*1 ALL
POXOR*2 ALL
PYREN ALL
PYRENROM ALL
RAB ALL
RAHSP ALL/MBI/UTI
RAHAQ ALL/MBI/UTI
RALSP ALL/UTI
CUPRGILA*1 ALL/UTI
RALINSI ALL/UTI
RALMAN ALL/UTI
RALPIC ALL/UTI
CUPRRESP*1 ALL/UTI
RHINAQUA*1 ALL
RAOSP ALL/MBI/UTI
RAOORN ALL/MBI/UTI
RAOPLA ALL/MBI/UTI
RAOTER ALL/MBI/UTI
RGM ALL/UTI
REOTU*2 ALL
RESPV ALL
RHATU ALL
RHINSP ALL
RHINAQUA ALL
RHINATRO ALL
FONSECOM*4 ALL
FONSECOM*5 ALL
FONSEPED*2 ALL
EXOPSPIN*2 ALL
RHINO ALL
RHIZSP ALL/UTI
RHIRAD ALL/UTI
RHIRUBI ALL/UTI
RHIVITI ALL/UTI
RHIZMSP ALL
RHIZMMIE ALL
RHIZMPUS ALL
RHIZO ALL
RHIZARRH ALL
RHIZMICR ALL
RHIZSTOL*1 ALL
RHIZARRH*1 ALL
RHIZSTOL ALL
RHOSP ALL/CC/UTI
TSUKPAUR*1 ALL/CC/UTI
GORDBRON*1 ALL/CC/UTI
MYCCHLO*1 ALL/UTI
GORDSPUT*2 ALL/CC/UTI
RHOEQ ALL/CC/UTI
RHOERYT ALL/CC/UTI
RHOFASC ALL/CC/UTI
RHOGLOB ALL/CC/UTI
RHOGORD ALL/CC/UTI
RHOFASC*1 ALL/CC/UTI
GORDSPUT*1 ALL/CC/UTI
RHORHOD ALL/CC/UTI
RHORHOD*1 ALL/CC/UTI
GORDRUBR*2 ALL/CC/UTI
GORDTERR*1 ALL/CC/UTI
RHODO ALL
RHOGLU ALL
RHOMIN ALL
RHORUB*1 ALL
RHOPIL ALL
RHORUB ALL
RICSP ALL/UTI
RICAK ALL/UTI
RICCO ALL/UTI
RICPARK ALL/UTI
RICPR ALL/UTI
BARQUI*2 ALL/UTI
RICRI ALL/UTI
RICSIBI ALL/UTI
ORTSU*1 ALL/UTI
RICTY ALL/UTI
RIEMSP ALL/UTI
RIEMANAT ALL/UTI
RVF ALL
ROBISP ALL/UTI
ROBIPEOR ALL/UTI
BARELIZ*1 ALL/UTI
BARHEN*1 ALL/UTI
BARQUI*1 ALL/UTI
BARVIN*1 ALL/UTI
ROSE ALL/CC/UTI
ROSECERV ALL/CC/UTI
ROSEGILA ALL/CC/UTI
ROSEMUCO ALL/CC/UTI
ROTA ALL
ROTSP ALL/CC/MBI/UTI
ROTAERI ALL/CC/MBI/UTI
ROTDE ALL/CC/MBI/UTI
ROTHMU ALL/CC/MBI/UTI
RUBEL ALL
MEASL*1 ALL
RUBI ALL
RUMISP ALL/MBI/UTI
RUMIGNAV ALL/MBI/UTI
RUMHAN*2 ALL/MBI/UTI
BLAUPROD*1 ALL/MBI/UTI
RUMMSP ALL/CC/UTI
RUMMPYCN ALL/CC/UTI
SACCSP ALL/UTI
SACCGLAU ALL/UTI
SACCVIRI ALL/UTI
SACCH ALL/MBI
SACCER ALL/MBI
SACCHSP ALL/UTI
SACCHRECT ALL/UTI
SAKSSP ALL
SAKSVASI ALL
CMV*2 ALL
SAS ALL/UTI
SALBONG ALL/UTI
SALENT ALL/UTI
SAPRSP ALL
SARCISP ALL/MBI/UTI
MICLUT*2 ALL/CC/UTI
SARCIVENT ALL/MBI/UTI
SARINK*3 ALL
EXOPWERN*3 ALL
SARCSP ALL
SARINK ALL
SARCO ALL
SARCHOMI ALL
SARCLIND ALL
SARCSUIH ALL
SCAB ALL
NCOV2019 ALL
SCAB*1 ALL
SCARSP ALL/UTI
SCARINOP ALL/UTI
SCEDSP ALL
SCEDAPIO ALL
SCEDBOYD ALL
SCEPRO ALL
SCEPRO*1 ALL
SCHISP ALL
SCHICOMM ALL
SCHWSP ALL
PICPOL ALL
SCOLSP ALL
OCHRCONS*2 ALL
SCOLHUMI ALL
SCOPSP ALL
SCOPACRE ALL
SCOPBREV ALL
SCOPBRUM ALL
SCOPCAND ALL
SCYTSP ALL
NEOSDIMI*2 ALL
SCYTHYAL ALL
SELSP ALL/UTI
SELAR ALL/UTI
SELDI ALL/UTI
SELFL ALL/UTI
SELIN ALL/UTI
SELNO ALL/UTI
SELST ALL/UTI
SEPESP ALL
SERSP ALL/UTI
BRACPILO*1 ALL/UTI
SSP ALL/MBI/UTI
SEREN ALL/MBI/UTI
SERFI ALL/MBI/UTI
SERFO ALL/MBI/UTI
SERGR ALL/MBI/UTI
SL ALL/MBI/UTI
SM ALL/MBI/UTI
SR*1 ALL/MBI/UTI
SEROD ALL/MBI/UTI
SERPL ALL/MBI/UTI
SERPS ALL/MBI/UTI
SERQUIN ALL/MBI/UTI
SR ALL/MBI/UTI
SERUREI ALL/MBI/UTI
SHESP ALL/UTI
SHEALGA ALL/UTI
SHEPF ALL/UTI
SHISP ALL/UTI
SHIGC ALL/UTI
SHIGA ALL/UTI
SHIGB ALL/UTI
SHIGD ALL/UTI
SIMIAN ALL
SIMOSP ALL/UTI
ALYSCRAS*1 ALL/UTI
SIMOMUEL ALL/UTI
SLACSP ALL/MBI/UTI
SLACEXIG ALL/MBI/UTI
SLACHELI ALL/MBI/UTI
STRBA ALL/CC/MBI/UTI
STRBC ALL/CC/MBI/UTI
STRBG ALL/CC/MBI/UTI
POXVR*1 ALL
SNEASP ALL/UTI
SNEASANG ALL/UTI
SOLISP ALL/CC/UTI
BSILV ALL/CC/UTI
SOLOSP ALL/UTI
SOLOMOOR ALL/UTI
SPHSP ALL/UTI
SPHFAEC ALL/UTI
PEDOHEPA*1 ALL/UTI
SPHMI*1 ALL/UTI
SPHMU ALL/UTI
PEDOPISC*1 ALL/UTI
SPHST ALL/UTI
SPHTH ALL/UTI
SPMSP ALL/UTI
SPMPARA ALL/UTI
SPMPA ALL/UTI
SPISP ALL/UTI
SPORSP ALL
SPOROSE ALL
SPOSAL ALL
SPOROLSP ALL/UTI
BLAEV ALL/UTI
SPOROPSP ALL
SPOROSSP ALL/UTI
SPOSP ALL
SPOCYAN ALL
SPOSC*3 ALL
SPOSC ALL
SPOROSP ALL
SPOSC*2 ALL
SPOROPRUI ALL
SPOSC*1 ALL
SPOSC*4 ALL
SLE ALL
STACSP ALL
STACCHAR ALL
SS ALL/UTI
STAARL ALL/CC/UTI
SA ALL/UTI
STAAR ALL/CC/UTI
STACS ALL/CC/UTI
STACC ALL/CC/UTI
STACU ALL/CC/UTI
STACAP ALL/CC/UTI
STACAR ALL/CC/UTI
STACRC ALL/CC/UTI
STACUT ALL/CC/UTI
MACCAS*1 ALL/UTI
STACHR ALL/CC/UTI
STACO ALL/CC/UTI
STASCO ALL/CC/UTI
STASUR ALL/CC/UTI
STACON ALL/CC/UTI
STADELP ALL/UTI
SE ALL/CC/UTI
STAEQ ALL/CC/UTI
STAEE ALL/CC/UTI
STAEL ALL/CC/UTI
STAFE ALL/CC/UTI
STAFL ALL/CC/UTI
STAGA ALL/CC/UTI
STAHA ALL/CC/UTI
STAHO ALL/CC/UTI
STAHOM ALL/CC/UTI
STANOV ALL/CC/UTI
STAHYI ALL/UTI
STACHR*1 ALL/CC/UTI
STAHYI*1 ALL/UTI
STAIN ALL/UTI
STAKLO ALL/CC/UTI
STALE ALL/CC/UTI
STALU ALL/CC/UTI
STALUTR ALL/UTI
STAMUS ALL/CC/UTI
STANEP ALL/CC/UTI
VEIPA*1 ALL/MBI/UTI
STAPAS ALL/CC/UTI
STAPETT ALL/CC/UTI
STAPIS ALL/CC/UTI
STAPSEU ALL/UTI
STAVIT*1 ALL/CC/UTI
STASL ALL/CC/UTI
STASA ALL/CC/UTI
STASB ALL/CC/UTI
STASAP ALL/CC/UTI
STASH ALL/UTI
STACOA ALL/UTI
STASCH ALL/CC/UTI
STASC ALL/CC/UTI
STASCN ALL/CC/UTI
STALE*1 ALL/CC/UTI
STASRO ALL/CC/UTI
STASCU ALL/CC/UTI
STASI ALL/CC/UTI
STASU ALL/CC/UTI
STASUC ALL/CC/UTI
STASUS ALL/CC/UTI
STAVIT ALL/CC/UTI
STAWA ALL/CC/UTI
STAXY ALL/CC/UTI
CNS ALL/CC/UTI
CPS ALL/UTI
STEMSP ALL
STESP ALL/UTI
STEMA ALL/UTI
STEPSP ALL
STEPCIFE ALL
ROTHMU*1 ALL/CC/MBI/UTI
STRBS ALL/UTI
STRBM ALL/UTI
STR ALL/UTI
STRVA ALL/UTI
GRADJ*1 ALL/MBI/UTI
GBS ALL/UTI
STRALAC ALL/CC/MBI/UTI
STRANG*1 ALL/CC/MBI/UTI
STRVN ALL/CC/MBI/UTI
STRANG ALL/CC/MBI/UTI
STRAC ALL/CC/MBI/UTI
STRAUS ALL/CC/MBI/UTI
ENTA*1 ALL/MBI/UTI
STRBOVI ALL/CC/MBI/UTI
STRCANI ALL/UTI
STRGALL*1 ALL/CC/MBI/UTI
ENTCA*2 ALL/MBI/UTI
ENTECECO*1 ALL/MBI/UTI
STRVC ALL/CC/MBI/UTI
STRCC ALL/CC/MBI/UTI
STRCP ALL/CC/MBI/UTI
STRCRC ALL/CC/MBI/UTI
STRCR ALL/CC/MBI/UTI
STRDF*1 ALL/MBI/UTI
STRDENT ALL/CC/MBI/UTI
STRD ALL/CC/MBI/UTI
ENTD*1 ALL/MBI/UTI
STRDYS ALL/UTI
STRDEG ALL/UTI
STRDEQ ALL/UTI
GRANELEG*2 ALL/MBI/UTI
STRENT ALL/UTI
STREG ALL/UTI
STREQ ALL/UTI
STRZOO ALL/UTI
STRDE ALL/CC/MBI/UTI
ENTFS*1 ALL/MBI/UTI
ENTFM*1 ALL/MBI/UTI
STRF ALL/CC/MBI/UTI
ENTGA*1 ALL/MBI/UTI
STRGALL ALL/CC/MBI/UTI
STRGALGAL ALL/CC/MBI/UTI
STRGALMAC ALL/CC/MBI/UTI
STRGALPAS ALL/CC/MBI/UTI
LACTGARV*1 ALL/UTI
STRVG ALL/CC/MBI/UTI
RUMHAN*1 ALL/MBI/UTI
STRHYOV ALL/CC/MBI/UTI
STRINFA ALL/CC/MBI/UTI
STRLUTE*1 ALL/CC/MBI/UTI
STRINFINF ALL/CC/MBI/UTI
STRINF ALL/CC/MBI/UTI
STRINI ALL/UTI
SVI ALL/CC/MBI/UTI
STRALAC*1 ALL/CC/MBI/UTI
LACTLACT*1 ALL/UTI
STRLUTE ALL/CC/MBI/UTI
STRMACA ALL/CC/MBI/UTI
STRANG*2 ALL/CC/MBI/UTI
STRVM ALL/CC/MBI/UTI
STRMIT ALL/CC/MBI/UTI
GEMMO*1 ALL/MBI/UTI
STRVT ALL/CC/MBI/UTI
STRMUG ALL/CC/MBI/UTI
STROLIG ALL/CC/MBI/UTI
STROR ALL/CC/MBI/UTI
STROVIS ALL/UTI
STRPA ALL/CC/MBI/UTI
STRPARA ALL/UTI
ATOPAR*2 ALL/MBI/UTI
STRGALPAS*1 ALL/CC/MBI/UTI
STRPER ALL/CC/MBI/UTI
STRPLUR ALL/UTI
SP ALL/UTI
STRPORC ALL/UTI
BLAUPROD*3 ALL/MBI/UTI
STRPSEU ALL/CC/MBI/UTI
STRPSEUD ALL/UTI
GAS ALL/UTI
STRRT ALL/CC/MBI/UTI
ENTESACC*1 ALL/MBI/UTI
STRVS ALL/CC/MBI/UTI
STRSAG ALL/CC/MBI/UTI
STRSLV ALL/CC/MBI/UTI
STRSAL ALL/CC/MBI/UTI
SVS ALL/CC/MBI/UTI
STRSG ALL/CC/MBI/UTI
STRINI*1 ALL/UTI
STRSINE ALL/CC/MBI/UTI
STRSO ALL/CC/MBI/UTI
STRSUIS ALL/UTI
STRSAL*1 ALL/CC/MBI/UTI
STRTIGU ALL/CC/MBI/UTI
STRVU ALL/UTI
STRVE ALL/CC/MBI/UTI
SC ALL/UTI
GDS ALL/UTI
GFS ALL/CC/MBI/UTI
GGS ALL/UTI
STRESP ALL/UTI
STREALBU ALL/UTI
STREBIKI ALL/UTI
STRECAND ALL/UTI
STREGRIS*1 ALL/UTI
STRECLAV ALL/UTI
STREGRIS*3 ALL/UTI
STREFILA ALL/UTI
STREGRIS ALL/UTI
STRELINC ALL/UTI
STREFILA*1 ALL/UTI
STREGRIS*2 ALL/UTI
STRESOMA ALL/UTI
STRESPEC ALL/UTI
STRETHER ALL/UTI
STREVENE ALL/UTI
STRON ALL
SUCCSP ALL/UTI
SUCCDEXT ALL/UTI
SUTTSP ALL/UTI
SUTTWADS ALL/UTI
SUTSP ALL/UTI
SUTIND ALL/UTI
SYNCSP ALL
SYNCRACE ALL
TAENI ALL
TALASP ALL
PENIMARN*1 ALL
TALARUBE ALL
POXTA ALL
TANNSP ALL/MBI/UTI
TANNFORS ALL/MBI/UTI
TATMAC*1 ALL/UTI
TATMIC*1 ALL/UTI
TATSP ALL/MBI/UTI
TATPT ALL/MBI/UTI
TETRSP ALL/MBI/UTI
TETRHALO ALL/MBI/UTI
TETRSOLI ALL/MBI/UTI
THERSP ALL/UTI
TBE ALL
TISSP ALL/MBI/UTI
TISPR ALL/MBI/UTI
TOGTU ALL
NEOSDIMI*3 ALL
CANLIP*3 ALL/MBI
CANUTI*2 ALL/MBI
CANPARA*2 ALL/MBI
CANHAE*1 ALL/MBI
CANINC*1 ALL/MBI
CANPIN*1 ALL/MBI
CANUTI*3 ALL/MBI
CANUTI*4 ALL/MBI
TOXOC ALL
TOXO ALL
TOXOGOND ALL
TRASP ALL/MBI/UTI
TRAGU ALL/MBI/UTI
TRESP ALL/UTI
TRECA ALL/UTI
TREPALL ALL/UTI
TRICN ALL
TRICSP ALL
TRICVIRI ALL
TRICH ALL
TRICP ALL
TRICS ALL
TRIASA ALL
TRIBEI ALL
TRIBEI*1 ALL
TRIBEI*2 ALL
SARINK*1 ALL
TRILOUB ALL
TRIMUC ALL
TRIMYCO ALL
TRIOVOI ALL
GEOTRKLEB*2 ALL/MBI
TRIPUL ALL
TRICHSP ALL
TRICHOSP ALL
TRICU ALL
TROPSP ALL/UTI
TROPWHIP ALL/UTI
TRUESP ALL/CC/UTI
TRUEBERN ALL/CC/UTI
ARCPY ALL/CC/UTI
TRYSP ALL
TRYBRU ALL
TRYBRURHO ALL
TRYCR ALL
TRYCR*3 ALL
TRYRANG ALL
TRYCR*2 ALL
TSUKSP ALL/CC/UTI
TSUKINCH ALL/CC/UTI
TSUKPAUR ALL/CC/UTI
TSUKPULM ALL/CC/UTI
TSUKSTRA ALL/CC/UTI
TSUKTYRO ALL/CC/UTI
TURISP ALL/CC/UTI
TURIOTIT ALL/CC/UTI
TURICSP ALL/UTI
TURISANG ALL/UTI
ULOCSP ALL
URESP ALL/UTI
UREPARV ALL/UTI
UREUR ALL/UTI
USTISP ALL
POXVC ALL
VAGOSP ALL/UTI
VAGOFLUV ALL/UTI
ENTSP*2 ALL/MBI/UTI
ENTFS*2 ALL/MBI/UTI
ENTFM*2 ALL/MBI/UTI
VARICELLO*1 ALL
VZ*1 ALL
VARICELLO ALL
POXVR ALL
VEISP ALL/MBI/UTI
VEIPA*2 ALL/MBI/UTI
VEIATYP ALL/MBI/UTI
VEICAVI ALL/MBI/UTI
VEICRIC ALL/MBI/UTI
VEIDISP ALL/MBI/UTI
VEIMONT ALL/MBI/UTI
VEIPA ALL/MBI/UTI
VEIRATT ALL/MBI/UTI
VEIRODE ALL/MBI/UTI
VEE ALL
VERTSP ALL
VIBSP ALL/UTI
VIBAL ALL/UTI
VIBHAR*3 ALL/UTI
VCUN ALL/UTI
VIBCI ALL/UTI
PHODAM*1 ALL/UTI
CAMFU*1 ALL/UTI
VIBFL ALL/UTI
VIBFU ALL/UTI
VIBHAR ALL/UTI
VIBME ALL/UTI
VIBMI ALL/UTI
VIBPA ALL/UTI
CAMSPUT*1 ALL/UTI
WOLSU*1 ALL/UTI
VIBHAR*4 ALL/UTI
VIBVU ALL/UTI
VIRSP ALL/CC/UTI
VIRPAN ALL/CC/UTI
SVU ALL/CC/MBI/UTI
VIRUS ALL
WANGSP ALL
WANGDERM ALL
WAUTSP ALL/UTI
CUPRGILA*2 ALL/UTI
CUPRPAUC*1 ALL/UTI
CUPRRESP*2 ALL/UTI
WEESP ALL/UTI
WEEVI ALL/UTI
BERZOO*1 ALL/UTI
WEISSP ALL/MBI/UTI
WEISCONF ALL/MBI/UTI
WNV ALL
WEE ALL
WOLSP ALL/UTI
CAMCU*1 ALL/UTI
CAMRE*1 ALL/UTI
WOLSU ALL/UTI
XANSP ALL/UTI
STEMA*4 ALL/UTI
XENSP ALL/UTI
XENLU*1 ALL/UTI
XENNU ALL/UTI
XMRV ALL
YEAST ALL
TOGYF ALL
YERSP ALL/UTI
YERAL ALL/UTI
YERALEK ALL/UTI
YERBE ALL/UTI
YEREN ALL/UTI
YERFR ALL/UTI
YERIN ALL/UTI
YERKR ALL/UTI
YERMO ALL/UTI
YERPE ALL/UTI
YERPS ALL/UTI
YERRO ALL/UTI
YERRU ALL/UTI
YOKSP ALL/MBI/UTI
YOKRE ALL/MBI/UTI
ZIKAVI ALL
CLOOR*1 ALL/MBI/UTI
y identify an organism that cannot be found when referencing the NHSN Organism List. DO NOT interpret the absence of an or
have an organism which is not found on the NHSN Organism List, please contact us at nhsn@cdc.gov for guidance on appropria

NHSN Display Name

Abiotrophia
Abiotrophia adiacens
Abiotrophia adjacens
Abiotrophia defectiva
Abiotrophia elegans
Acanthamoeba
Acholeplasma
Acholeplasma laidlawii
Acholeplasma oculi
Achromobacter
Achromobacter denitrificans
Achromobacter piechaudii
Achromobacter ruhlandii
Achromobacter xylosoxidans
Achromobacter xylosoxidans xylosoxidans
Acidaminococcus
Acidaminococcus fermentans
Acid-fast bacillus
Acidovorax
Acidovorax delafieldii
Acidovorax facilis
Acidovorax temperans
Acinetobacter
Acinetobacter baumannii
Acinetobacter calcoaceticus
Acinetobacter calcoaceticus-baumannii complex
Acinetobacter haemolyticus
Acinetobacter johnsonii
Acinetobacter junii
Acinetobacter lwoffi
Acinetobacter nosocomialis
Acinetobacter pittii
Acinetobacter radioresistens
Acinetobacter schindleri
Acinetobacter ursingii
Acladium castellani
Acladium castellanii
Acremonium
Acremonium alabamensis
Acremonium kiliense
Acremonium potroni
Acremonium potronii
Acremonium recifei
Acremonium strictum
Acrotheca aquaspersa
Actinobacillus
Actinobacillus actinomycetemcomitans
Actinobacillus equuli
Actinobacillus hominis
Actinobacillus lignieresii
Actinobacillus suis
Actinobacillus ureae
Actinobacterium meyeri
Actinobaculum
Actinobaculum massiliense
Actinobaculum schaalii
Actinobaculum urinale
Actinomadura
Actinomadura latina
Actinomadura madurae
Actinomadura pelletieri
Actinomyces
Actinomyces bernardiae
Actinomyces bovis
Actinomyces cardiffensis
Actinomyces dentalis
Actinomyces europaeus
Actinomyces funkei
Actinomyces georgiae
Actinomyces gerencseriae
Actinomyces graevenitzii
Actinomyces hongkongensis
Actinomyces israelii
Actinomyces meyeri
Actinomyces naeslundii
Actinomyces nasicola
Actinomyces neuii

Actinomyces odontolyticus
Actinomyces oricola
Actinomyces oris
Actinomyces pyogenes
Actinomyces radicidentis
Actinomyces radingae
Actinomyces turicensis
Actinomyces urogenitalis
Actinomyces viscosus
Actinotignum
Actinotignum schaalii
Actinotignum urinale
Aerobe
Aerococcus
Aerococcus christensenii
Aerococcus sanguinicola
Aerococcus urinae
Aerococcus urinaeequi
Aerococcus urinaehominis
Aerococcus viridans
Aeromonas
Aeromonas bestiarum
Aeromonas caviae
Aeromonas caviae complex
Aeromonas encheleia
Aeromonas enteropelogenes
Aeromonas eucrenophila
Aeromonas hydrophila
Aeromonas hydrophila complex
Aeromonas jandaei
Aeromonas media
Aeromonas molluscorum
Aeromonas popoffii
Aeromonas punctata
Aeromonas salmonicida
Aeromonas schubertii
Aeromonas simiae
Aeromonas sobria
Aeromonas trota
Aeromonas veronii
Afipia
Afipia clevelandensis
Afipia felis
Aggregatibacter
Aggregatibacter actinomycetemcomitans
Aggregatibacter aphrophilus
Aggregatibacter segnis
Agrobacterium
Agrobacterium radiobacter
Agromyces
Alcaligenes
Alcaligenes bronchisepticus
Alcaligenes faecalis
Alcaligenes odorans
Alcaligenes piechaudii
Alcaligenes xylosoxidans
Alcaligenes xylosoxidans xylosoxidans
Aleurisma
Aleurisma apiospermum
Alishewanella
Alishewanella fetalis
Alistipes
Alistipes putredinis
Allescheria boydii
Alloiococcus

Alloiococcus otitis
Alloscardovia
Alloscardovia omnicolens
Alpha-hemolytic streptococcus
Alpha-hemolytic Streptococcus, not S pneumoniae
Alternaria
Alternaria alternata
Alternaria dianthicola
Alternaria infectoria
Alternaria tenuis
Alternaria tenuissima
Alysiella
Alysiella crassa
Amycolatopsis
Amycolatopsis orientalis
Anaerobe
Anaerobic Gram-negative bacillus
Anaerobic Gram-negative coccobacillus
Anaerobic Gram-negative coccus
Anaerobic Gram-positive bacillus
Anaerobic Gram-positive coccobacillus
Anaerobic Gram-positive coccus
Anaerobiospirillum
Anaerobiospirillum succiniciproducens
Anaerobiospirillum thomasii
Anaerococcus
Anaerococcus hydrogenalis
Anaerococcus lactolyticus
Anaerococcus octavius
Anaerococcus prevotii
Anaerococcus tetradius
Anaerococcus vaginalis
Anaerorhabdus
Anaerorhabdus furcosus
Anaplasma
Ancylostoma
Aneurinibacillus
Aneurinibacillus aneurinilyticus
Angiostrongylus
Apophysomyces
Apophysomyces elegans
Aquabacterium
Aquabacterium parvum
Arachnia propionica
Arbovirus group B
Arcanobacterium
Arcanobacterium bernardiae
Arcanobacterium haemolyticum
Arcanobacterium pluranimalium
Arcanobacterium pyogenes
Arcobacter
Arcobacter butzleri
Arcobacter nitrofigilis
Arenavirus
Arsenicicoccus
Arsenicicoccus bolidensis
Arthrobacter
Arthrobacter agilis
Arthrobacter albus
Arthrobacter arilaitensis
Arthrobacter astrocyaneus
Arthrobacter aurescens
Arthrobacter bergerei
Arthrobacter chlorophenolicus
Arthrobacter citreus
Arthrobacter creatinolyticus
Arthrobacter crystallopoietes
Arthrobacter cumminsii
Arthrobacter flavus
Arthrobacter gandavensis
Arthrobacter gangotriensis
Arthrobacter globiformis
Arthrobacter histidinolovorans
Arthrobacter ilicis
Arthrobacter kerguelensis
Arthrobacter koreensis
Arthrobacter luteolus
Arthrobacter methylotrophus
Arthrobacter mysorens
Arthrobacter nasiphocae
Arthrobacter nicotianae
Arthrobacter nicotinovorans
Arthrobacter nitroguajacolicus
Arthrobacter oryzae
Arthrobacter oxydans
Arthrobacter pascens
Arthrobacter polychromogenes
Arthrobacter protophormiae
Arthrobacter psychrolactophilus
Arthrobacter psychrophenolicus
Arthrobacter ramosus
Arthrobacter rhombi
Arthrobacter roseus
Arthrobacter russicus
Arthrobacter scleromae
Arthrobacter siderocapsulatus
Arthrobacter sulfonivorans
Arthrobacter sulfureus
Arthrobacter uratoxydans
Arthrobacter ureafaciens
Arthrobacter variabilis
Arthrobacter viscosus
Arthrobacter woluwensis
Arthroderma
Arthrographis
Ascaris
Aspergillus
Aspergillus candidus
Aspergillus clavatus
Aspergillus deflectus
Aspergillus flavipes
Aspergillus flavus
Aspergillus fumigatus
Aspergillus glaucus
Aspergillus nidulans
Aspergillus niger
Aspergillus niveus
Aspergillus ochraceus
Aspergillus oryzae
Aspergillus parasiticus
Aspergillus restrictus
Aspergillus sydowii
Aspergillus terreus
Aspergillus ustus
Aspergillus versicolor
Aspergillus wentii
Astroviridae
Atopobium
Atopobium fossor
Atopobium minutum
Atopobium parvulum
Atopobium rimae
Atopobium vaginae
Aurantimonas altamirensis
Aureimonas
Aureimonas altamirensis
Aureobacterium liquefaciens
Aureobasidium
Aureobasidium pullulans
Averyella
Azorhizobium
Azorhizobium caulinodans
Azospirillum
Azospirillum brasilense
Azymoprocandida lipolytica
B19 virus
Babesia
Babesia microti
Bacillus
Bacillus aeolius
Bacillus aerius
Bacillus agaradhaerens
Bacillus agri
Bacillus alcalophilus
Bacillus algicola
Bacillus alvei
Bacillus amyloliquefaciens
Bacillus aneurinolyticus
Bacillus anthracis
Bacillus aquimaris
Bacillus arseniciselenatis
Bacillus asahii
Bacillus atrophaeus
Bacillus azotoformans
Bacillus badius
Bacillus barbaricus
Bacillus bataviensis
Bacillus benzoevorans
Bacillus boroniphilus
Bacillus brevis
Bacillus butanolivorans
Bacillus carboniphilus
Bacillus centrosporus
Bacillus cereus
Bacillus cereus group
Bacillus chittonlyticus
Bacillus circulans
Bacillus circulans group
Bacillus clarkii
Bacillus clausii
Bacillus coagulans
Bacillus cohnii
Bacillus decisifrondis
Bacillus decolorationis
Bacillus dipsosauri
Bacillus drentensis
Bacillus edaphicus
Bacillus ehimensis
Bacillus endophyticus
Bacillus farraginis
Bacillus fastidiosus
Bacillus firmus
Bacillus flexus
Bacillus fordii
Bacillus fortis
Bacillus fumarioli
Bacillus funiculus
Bacillus galactophilus
Bacillus galactosidilyticus
Bacillus gelatini
Bacillus gibsonii
Bacillus ginsengi
Bacillus gornadae
Bacillus halmapalus
Bacillus halodenitrificans
Bacillus halodurans
Bacillus horikoshii
Bacillus horti
Bacillus humi
Bacillus hwajinpoensis
Bacillus idriensis
Bacillus indicus
Bacillus infantis
Bacillus infernus
Bacillus jeotgali
Bacillus kaustophilus
Bacillus korlensis
Bacillus krulwichiae
Bacillus laevolacticus
Bacillus larvae
Bacillus laterosporus
Bacillus lentimorbus
Bacillus lentus
Bacillus licheniformis
Bacillus luciferensis
Bacillus macerans
Bacillus macroides
Bacillus macyae
Bacillus marinus
Bacillus marisflavi
Bacillus massiliensis
Bacillus megaterium
Bacillus methanolicus
Bacillus mojavensis
Bacillus mucilaginosus
Bacillus muralis
Bacillus mycoides
Bacillus naganoensis
Bacillus nealsonii
Bacillus niacini
Bacillus novalis
Bacillus odysseyi
Bacillus okuhidensis
Bacillus oleronius
Bacillus pabuli
Bacillus pallidus
Bacillus pantothenticus
Bacillus parabrevis
Bacillus pasteurii
Bacillus patagoniensis
Bacillus pocheonensis
Bacillus polymyxa
Bacillus popilliae
Bacillus pseudalcaliphilus
Bacillus pseudofirmus
Bacillus pseudomycoides
Bacillus psychrophilus
Bacillus psychrosaccharolyticus
Bacillus pulvifaciens
Bacillus pumilus
Bacillus pycnus
Bacillus salexigens
Bacillus saliphilus
Bacillus selenitireducens
Bacillus shackletonii
Bacillus silvestris
Bacillus simplex
Bacillus siralis
Bacillus smithii
Bacillus soli
Bacillus sonorensis
Bacillus sporothermodurans
Bacillus subterraneus
Bacillus subtilis
Bacillus subtilis group
Bacillus subtilis inaquosorum
Bacillus subtilis spizizenii
Bacillus subtilis subtilis
Bacillus tequilensis
Bacillus thermantarcticus
Bacillus thermoamylovorans
Bacillus thermocatenulatus
Bacillus thermocloacae
Bacillus thermodenitrificans
Bacillus thermoglucosidasius
Bacillus thiaminolyticus
Bacillus thuringiensis
Bacillus tusciae
Bacillus validus
Bacillus vallismortis
Bacillus vedderi
Bacillus velezensis
Bacillus vietnamensis
Bacillus violaceus
Bacillus vireti
Bacillus weihenstephanensis
Bacillus, not B. anthracis
Bacterionema matruchotii
Bacteroides
Bacteroides bivius
Bacteroides buccae
Bacteroides buccalis
Bacteroides caccae
Bacteroides capillosus
Bacteroides capillus
Bacteroides clostridiiformis
Bacteroides coagulans
Bacteroides corporis
Bacteroides denticola
Bacteroides disiens
Bacteroides distasonis
Bacteroides eggerthii
Bacteroides endodontalis
Bacteroides fragilis
Bacteroides fragilis group
Bacteroides furcosus
Bacteroides gingivalis
Bacteroides goldsteinii
Bacteroides gracilis
Bacteroides heparinolyticus
Bacteroides hypermegas
Bacteroides intermedius
Bacteroides levii
Bacteroides macacae
Bacteroides massiliensis
Bacteroides melaninogenicus
Bacteroides merdae
Bacteroides multiacidus
Bacteroides nodosus
Bacteroides nordii
Bacteroides ochraceus
Bacteroides oralis
Bacteroides oris
Bacteroides oulorum
Bacteroides ovatus
Bacteroides pentosaceus
Bacteroides praeacutus
Bacteroides putredinis
Bacteroides pyogenes
Bacteroides ruminicola
Bacteroides salivosus
Bacteroides splanchnicus
Bacteroides stercoris
Bacteroides suis
Bacteroides tectus
Bacteroides thetaiotaomicron
Bacteroides uniformis
Bacteroides ureolyticus
Bacteroides veroralis
Bacteroides vulgatus
Bacteroides zoogleoformans
Balantidium
Balneatrix
Balneatrix alpica
Bartonella
Bartonella bacilliformis
Bartonella clarridgeiae
Bartonella elizabethae
Bartonella henselae
Bartonella quintana
Bartonella vinsonii
Basidiobolus
Basidiobolus haptosporus
Basidiobolus heterosporus
Basidiobolus meristosporus
Basidiobolus ranarum
Beauveria
Beauveria bassiana
Beneckea alginolytica
Beneckea harveyi
Beneckea parahaemolytica
Beneckea vulnifica
Bergeyella
Bergeyella zoohelcum
Beta-hemolytic streptococcus
Beta-hemolytic Streptococcus, group A
Beta-hemolytic streptococcus, non-Group A, non-Group B
Bifidobacterium
Bifidobacterium adolescentis
Bifidobacterium angulatum
Bifidobacterium appendicitis
Bifidobacterium bifidum
Bifidobacterium breve
Bifidobacterium catenulatum
Bifidobacterium dentium
Bifidobacterium ericksonii
Bifidobacterium gallicum
Bifidobacterium infantis
Bifidobacterium longum
Bifidobacterium pseudocatenulatum
Bifidobacterium scardovii
Bifidobacterium suis
Bilophila
Bilophila wadsworthia
Bipolaris
Bipolaris australiensis
Bipolaris hawaiiense
Bipolaris hawaiiensis
Bipolaris spicifera
BK Polyomavirus
Blastoschizomyces
Blautia
Blautia coccoides
Blautia hansenii
Blautia producta
Bocavirus
Body lice
Bordetella
Bordetella avium
Bordetella bronchiseptica
Bordetella hinzii
Bordetella holmesii
Bordetella parapertussis
Bordetella pertussis
Bordetella petrii
Bordetella trematum
Borrelia
Borrelia afzelii
Borrelia anserina
Borrelia burgdorferi
Borrelia caucasica
Borrelia coriaceae
Borrelia crocidurae
Borrelia duttoni
Borrelia duttonii
Borrelia garinii
Borrelia hermsii
Borrelia hispanica
Borrelia japonica
Borrelia lusitaniae
Borrelia mazzottii
Borrelia miyamotoi
Borrelia novyi
Borrelia obermyeri
Borrelia parkeri
Borrelia recurrentis
Borrelia tanukii
Borrelia theileri
Borrelia turicatae
Borrelia valaisiana
Borrelia venezuelensis
Botryodiplodia
Botryodiplodia theobromae
Brachybacterium
Brachybacterium muris
Brachycladium spiciferum
Brachyspira
Brachyspira aalborgi
Brachyspira pilosicoli
Branhamella catarrhalis
Branhamella cuniculi
Branhamella ovis
Brevibacillus
Brevibacillus agri
Brevibacillus brevis
Brevibacillus centrosporus
Brevibacillus laterosporus
Brevibacillus parabrevis
Brevibacterium
Brevibacterium albidum
Brevibacterium ammoniagenes
Brevibacterium casei
Brevibacterium epidermidis
Brevibacterium imperiale
Brevibacterium linens
Brevibacterium luteolum
Brevibacterium mcbrellneri
Brevibacterium oxydans
Brevibacterium ravenspurgense
Brevibacterium sanguinis
Brevibacterium vitarumen
Brevundimonas
Brevundimonas diminuta
Brevundimonas vesicularis
Brucella
Brucella abortus
Brucella canis
Brucella melitensis
Brucella neotomae
Brucella ovis
Brucella suis
Budvicia
Budvicia aquatica
Bulleidia
Bulleidia extructa
Bunyaviridae
Burkholderia
Burkholderia ambifaria
Burkholderia anthina
Burkholderia arboris
Burkholderia cenocepacia
Burkholderia cepacia
Burkholderia cepacia complex
Burkholderia cocovenenans
Burkholderia contaminans
Burkholderia diffusa
Burkholderia dolosa
Burkholderia fungorum
Burkholderia gladioli
Burkholderia lata
Burkholderia latens
Burkholderia mallei
Burkholderia metallica
Burkholderia multivorans
Burkholderia pickettii
Burkholderia pseudomallei
Burkholderia pyrrocinia
Burkholderia stabilis
Burkholderia thailandensis
Burkholderia ubonensis
Burkholderia vietnamiensis
Buttiauxella
Buttiauxella agrestis
Buttiauxella brennerae
Buttiauxella ferragutiae
Buttiauxella gaviniae
Buttiauxella izardii
Buttiauxella noackiae
Buttiauxella warmboldiae
Butyribacterium rettgeri
Butyricimonas
Butyricimonas virosa
Butyrivibrio
Butyrivibrio fibrisolvens
Butyrivibrio hungatei
Calicivirus
California encephalitis virus
Calymmatobacterium
Calymmatobacterium granulomatis
Campylobacter
Campylobacter butzleri
Campylobacter cinaedi
Campylobacter coli
Campylobacter concisus
Campylobacter curvus
Campylobacter fennelliae
Campylobacter fetus
Campylobacter fetus fetus
Campylobacter fetus jejuni
Campylobacter fetus venerealis
Campylobacter gracilis
Campylobacter helveticus
Campylobacter hominis
Campylobacter hyointestinalis
Campylobacter insulaenigrae
Campylobacter jejuni
Campylobacter jejuni doylei
Campylobacter jejuni jejuni
Campylobacter lanienae
Campylobacter lari
Campylobacter laridis
Campylobacter mucosalis
Campylobacter mustelae
Campylobacter nitrofigilis
Campylobacter pylori
Campylobacter rectus
Campylobacter showae
Campylobacter sputorum
Campylobacter sputorum bubulus
Campylobacter sputorum mucosalis
Campylobacter sputorum sputorum
Campylobacter upsaliensis
Campylobacter ureolyticus
Candida
Candida albicans
Candida albicans var stellatoidea
Candida auris
Candida bracarensis
Candida brumptii
Candida catenulata
Candida ciferrii
Candida dubliniensis
Candida duobushaemulonii
Candida fabianii
Candida famata
Candida glabrata
Candida guilliermondii
Candida guilliermondii var membranaefaciens
Candida haemulonii
Candida inconspicua
Candida intermedia
Candida kefyr
Candida krusei
Candida lambica
Candida lipolytica
Candida lusitaniae
Candida metapsilosis
Candida nivariensis
Candida norvegensis
Candida obtusa
Candida orthopsilosis
Candida parapsilosis
Candida parapsilosis complex
Candida parapsilosis var obtusa
Candida pararugosa
Candida pelliculosa
Candida pintolopesii
Candida pulcherrima
Candida ravautii
Candida rugosa
Candida sake
Candida slooffii
Candida stellatoidea
Candida stellimalicola
Candida tropicalis
Candida utilis
Candida vini
Candida viswanathii
Candida zeylanoides
Capnocytophaga
Capnocytophaga canimorsus
Capnocytophaga cynodegmi
Capnocytophaga gingivalis
Capnocytophaga granulosa
Capnocytophaga haemolytica
Capnocytophaga ochracea
Capnocytophaga sputigena
carbapenem resistant Acinetobacter
carbapenem resistant Enterobacter cloacae
carbapenem resistant Klebsiella pneumoniae
Cardiobacterium
Cardiobacterium hominis
Cardiobacterium valvarum
Catabacter
Catabacter hongkongensis
Catenibacterium
Catenibacterium mitsuokai
Catonella
Catonella morbi
Cedecea
Cedecea davisae
Cedecea lapagei
Cedecea neteri
Cellulomonas
Cellulomonas cellulans
Cellulomonas hominis
Cellulomonas humilata
Cellulosimicrobium
Cellulosimicrobium cellulans
Centipeda
Centipeda periodontii
Cephalosporium
Cephalosporium kiliense
Cephalosporium potronii
Cephalosporium recifei
Cephalosporium strictum
Chaetomium
Chaetomium atrobrunneum
Chaetomium globosum
Chikungunya virus
Chilomastix
Chilomastix mesnili
Chlamydia
Chlamydia pneumoniae
Chlamydia psittaci
Chlamydia trachomatis
Chlamydophila
Chlamydophila abortus
Chlamydophila pneumoniae
Chlamydophila psittaci
Chromobacterium
Chromobacterium janthinum
Chromobacterium violaceum
Chryseobacterium
Chryseobacterium gleum
Chryseobacterium indologenes
Chryseomonas
Chryseomonas luteola
Chryseomonas polytricha
Chrysosporium
Citrobacter
Citrobacter amalonaticus
Citrobacter braakii
Citrobacter diversus
Citrobacter farmeri
Citrobacter freundii
Citrobacter gillenii
Citrobacter koseri
Citrobacter murliniae
Citrobacter rodentium
Citrobacter sedlakii
Citrobacter werkmanii
Citrobacter youngae
Cladophialophora
Cladophialophora bantiana
Cladosporium
Cladosporium cladosporioides
Cladosporium herbarum
Cladosporium sphaerospermum
Cladosporium werneckii
Clavispora
Clavispora lusitaniae
Clostridioides
Clostridioides difficile
Clostridium
Clostridium absonum
Clostridium argentinense
Clostridium barati
Clostridium baratii
Clostridium barkeri
Clostridium bartlettii
Clostridium beijerinckii
Clostridium bifermentans
Clostridium bolteae
Clostridium botulinum
Clostridium butyricum
Clostridium cadaveris
Clostridium carnis
Clostridium celerecrescens
Clostridium clostridioforme
Clostridium cochlearium
Clostridium cocleatum
Clostridium difficile
Clostridium disporicum
Clostridium fallax
Clostridium ghoni
Clostridium ghonii
Clostridium glycolicum
Clostridium haemolyticum
Clostridium hastiforme
Clostridium hathewayi
Clostridium histolyticum
Clostridium indolis
Clostridium innocuum
Clostridium intestinale
Clostridium irregulare
Clostridium irregularis
Clostridium lentoputrescens
Clostridium leptum
Clostridium limosum
Clostridium malenominatum
Clostridium novyi
Clostridium orbiscindens
Clostridium oroticum
Clostridium paraperfringens
Clostridium paraputrificum
Clostridium perenne
Clostridium perfringens
Clostridium pseudofallax
Clostridium pseudotetanicum
Clostridium putrefaciens
Clostridium ramosum
Clostridium sardiniense
Clostridium septicum
Clostridium sordellii
Clostridium sphenoides
Clostridium spiroforme
Clostridium sporogenes
Clostridium sporosphaeroides
Clostridium subterminale
Clostridium symbiosum
Clostridium tertium
Clostridium tetani
Clostridium villosum
Clostridium, not C. perfringens
Cokeromyces
Cokeromyces recurvatus
Coliform bacteria
Collinsella
Collinsella aerofaciens
Collinsella intestinalis
Collinsella stercoris
Colorado tick fever virus
Comamonas
Comamonas acidovorans
Comamonas aquatica
Comamonas kerstersii
Comamonas terrigena
Comamonas testosteroni
Conidiobolus
Conidiobolus coronatus
Conidiobolus incongruus
Coniothyrium
Contagious ecthyma virus
Contagious pustular dermatitis virus
Coprococcus
Coprococcus eutactus
Corynebacterium
Corynebacterium accolens
Corynebacterium afermentans
Corynebacterium afermentans afermentans
Corynebacterium afermentans lipophilum
Corynebacterium ammoniagenes
Corynebacterium amycolatum
Corynebacterium appendicis
Corynebacterium aquilae
Corynebacterium argentoratense
Corynebacterium atypicum
Corynebacterium aurimucosum
Corynebacterium auris
Corynebacterium auriscanis
Corynebacterium beticola
Corynebacterium bovis
Corynebacterium callunae
Corynebacterium camporealensis
Corynebacterium capitovis
Corynebacterium casei
Corynebacterium caspium
Corynebacterium ciconiae
Corynebacterium confusum
Corynebacterium coyleae
Corynebacterium cystitidis
Corynebacterium diphtheriae
Corynebacterium durum
Corynebacterium efficiens
Corynebacterium equi
Corynebacterium falsenii
Corynebacterium fascians
Corynebacterium felinum
Corynebacterium flavescens
Corynebacterium flavidum
Corynebacterium freneyi
Corynebacterium genitalium
Corynebacterium glaucum
Corynebacterium glucuronolyticum
Corynebacterium glutamicum
Corynebacterium halotolerans
Corynebacterium hemolyticum
Corynebacterium hoagii
Corynebacterium hofmannii
Corynebacterium imitans
Corynebacterium jeikeium
Corynebacterium kroppenstedtii
Corynebacterium kutscheri
Corynebacterium lilium
Corynebacterium lipophiloflavum
Corynebacterium macginleyi
Corynebacterium manihot
Corynebacterium massiliense
Corynebacterium mastitidis
Corynebacterium matruchotii
Corynebacterium mediolanum
Corynebacterium minutissimum
Corynebacterium mooreparkense
Corynebacterium mucifaciens
Corynebacterium murisepticum
Corynebacterium murium
Corynebacterium mycetoides
Corynebacterium nephridii
Corynebacterium nigricans
Corynebacterium ovis
Corynebacterium paurometabolum
Corynebacterium phocae
Corynebacterium pilosum
Corynebacterium propinquum
Corynebacterium pseudodiphtheriticum
Corynebacterium pseudogenitalium
Corynebacterium pseudotuberculosis
Corynebacterium pseudotuberculostearicum
Corynebacterium pyogenes
Corynebacterium pyruviciproducens
Corynebacterium renale
Corynebacterium resistens
Corynebacterium riegelii
Corynebacterium rubrum
Corynebacterium seminale
Corynebacterium simulans
Corynebacterium singulare
Corynebacterium sphenisci
Corynebacterium spheniscorum
Corynebacterium striatum
Corynebacterium suicordis
Corynebacterium sundsvallense
Corynebacterium tenuis
Corynebacterium terpenotabidum
Corynebacterium testudinoris
Corynebacterium thomssenii
Corynebacterium tuberculostearicum
Corynebacterium tuscaniense
Corynebacterium ulcerans
Corynebacterium urealyticum
Corynebacterium ureicelerivorans
Corynebacterium variabile
Corynebacterium variabilis
Corynebacterium viscosum
Corynebacterium vitaeruminis
Corynebacterium vitarumen
Corynebacterium vitaruminis
Corynebacterium xerosis
Corynebacterium, not C. diphtheriae
Corynebacterium, not C. jeikeium
Corynebacterium, toxigenic
coryneform gram positive bacilli
Coxiella
Coxiella burnetii
Creutzfeldt-Jakob agent
Crimean-Congo hemorrhagic fever virus
Cronobacter
Cronobacter dublinensis
Cronobacter malonaticus
Cronobacter muytjensii
Cronobacter sakazakii
Cronobacter turicensis
Cryptobacterium
Cryptobacterium curtum
Cryptococcus aggregatus
Cryptococcus utilis
Cryptosporidium
Cryptosporidium hominis
Cryptosporidium parvum
Cunninghamella
Cunninghamella bertholletiae
Cupriavidus
Cupriavidus basilensis
Cupriavidus gilardii
Cupriavidus metallidurans
Cupriavidus necator
Cupriavidus pauculus
Cupriavidus respiraculi
Curtobacterium
Curtobacterium albidum
Curvularia
Curvularia geniculata
Curvularia lunata
Curvularia speciferum
Curvularia spicifera
Cutibacterium
Cutibacterium acnes
Cyberlindnera fabianii
Cyclospora
Cyclospora cayetanensis
Cysticercus
Cytophaga heparina
Dactylaria constricta
Dactylaria constricta var gallopava
Debaryomyces
Debaryomyces hansenii
Debaryomyces polymorphus
Deinococcus
Delftia
Delftia acidovorans
Delta hepatitis viral agent
Dengue virus
Dermabacter
Dermabacter hominis
Dermacoccus
Dermacoccus nishinomiyaensis
Dermatophilus
Dermatophilus congolensis
Dermatophilus pedis
Desulfomonas
Desulfovibrio
Desulfovibrio desulfuricans
Desulfovibrio piger
Desulfovibrio vulgaris
Dialister
Dialister micraerophilus
Dialister pneumosintes
Dibothriocephalus
Dichelobacter
Dichelobacter nodosus
Dientamoeba
Dientamoeba fragilis
Dietzia
Dietzia cinnamea
Diphtheroids
Diphtheroids, aerobic
Diphtheroids, anaerobic
Diphyllobothrium
Dipylidium
Dolosicoccus
Dolosicoccus paucivorans
Dolosigranulum
Dolosigranulum pigrum
Dorea
Dorea formicigenerans
Dorea longicatena
Drechslera
Drechslera australiensis
Drechslera halodes
Drechslera hawaiiensis
Drechslera rostrata
Drechslera spicifera
Dyella
Dysgonomonas
Dysgonomonas capnocytophagoides
Dysgonomonas gadei
Eastern equine encephalitis virus
Ebolavirus
Echinococcus
Edmonston virus
Edwardsiella
Edwardsiella anguillimortifera
Edwardsiella hoshinae
Edwardsiella ictaluri
Edwardsiella tarda
Eelworm
Eggerthella
Eggerthella lenta
Eggerthella sinesis
Eggerthia
Eggerthia catenaformis
Ehrlichia
Eikenella
Eikenella corrodens
Elizabethkingia
Elizabethkingia meningoseptica
Emmonsia
Empedobacter
Empedobacter brevis
Endolimax
Endolimax nana
Entamoeba
Entamoeba coli
Entamoeba dispar
Entamoeba gingivalis
Entamoeba hartmanni
Entamoeba histolytica
Entamoeba histolytica/dispar
Entamoeba polecki
Enterobacter
Enterobacter aerogenes
Enterobacter agglomerans
Enterobacter agglomerans group
Enterobacter amnigenus
Enterobacter asburiae
Enterobacter cancerogenus
Enterobacter cloacae
Enterobacter cloacae complex
Enterobacter cloacae dissolvens
Enterobacter cowanii
Enterobacter dissolvens
Enterobacter gergoviae
Enterobacter hafniae
Enterobacter hormaechei
Enterobacter intermedius
Enterobacter kobei
Enterobacter liquefaciens
Enterobacter ludwigii
Enterobacter nimipressuralis
Enterobacter pyrinus
Enterobacteriaceae
Enterobius
Enterococcus
Enterococcus asini
Enterococcus avium
Enterococcus canis
Enterococcus casseliflavus
Enterococcus cecorum
Enterococcus dispar
Enterococcus durans
Enterococcus faecalis
Enterococcus faecium
Enterococcus flavescens
Enterococcus gallinarum
Enterococcus gilvus
Enterococcus haemoperoxidus
Enterococcus hermanniensis
Enterococcus hirae
Enterococcus italicus
Enterococcus malodoratus
Enterococcus moraviensis
Enterococcus mundtii
Enterococcus pallens
Enterococcus phoeniculicola
Enterococcus pseudoavium
Enterococcus raffinosus
Enterococcus ratti
Enterococcus saccharolyticus
Enterococcus saccharominimus
Enterococcus seriolicida
Enterococcus solitarius
Enterococcus sulfureus
Enterococcus villorum
Enterocytozoon
Enterohemorrhagic Escherichia coli, serotype O157:H7
Enteromonas
Enteromonas hominis
Enteropathogenic Escherichia coli
Enterovirus
Enterovirus type 72
Entomophthora
Entomophthora coronata
Epicoccum
Epidermophyton
Epstein-Barr virus
Erwinia
Erwinia ananas
Erwinia cancerogena
Erwinia dissolvens
Erwinia herbicola-Enterobacter agglomerans group
Erwinia nimipressuralis
Erwinia persicina
Erwinia uredovora
Erysipelothrix
Erysipelothrix inopinata
Erysipelothrix insidiosa
Erysipelothrix rhusiopathiae
Erysipelothrix tonsillarum
Escherichia
Escherichia adecarboxylata
Escherichia albertii
Escherichia coli
Escherichia fergusonii
Escherichia hermannii
Escherichia vulneris
Eubacterium
Eubacterium aerofaciens
Eubacterium alactolyticum
Eubacterium barkeri
Eubacterium biforme
Eubacterium brachy
Eubacterium budayi
Eubacterium cadaveris
Eubacterium callanderi
Eubacterium combesii
Eubacterium contortum
Eubacterium cylindroides
Eubacterium dolichum
Eubacterium eligens
Eubacterium exiguum
Eubacterium fossor
Eubacterium hadrum
Eubacterium hallii
Eubacterium infirmum
Eubacterium lentum
Eubacterium limosum
Eubacterium minutum
Eubacterium moniliforme
Eubacterium nitrogenes
Eubacterium nodatum
Eubacterium plautii
Eubacterium ramulus
Eubacterium rectale
Eubacterium saburreum
Eubacterium saphenum
Eubacterium siraeum
Eubacterium sulci
Eubacterium tenue
Eubacterium timidum
Eubacterium ventriosum
Eubacterium yurii
Ewingella
Ewingella americana
Exiguobacterium
Exiguobacterium acetylicum
Exophiala
Exophiala bergeri
Exophiala dermatitidis
Exophiala jeanselmei
Exophiala spinifera
Exophiala werneckii
Exserohilum
Exserohilum rostratum
Extended spectrum beta-lactamase producing Citrobacter freundii

Extended spectrum beta-lactamase producing Enterobacter cloacae

Extended spectrum beta-lactamase producing Escherichia coli

Extended spectrum beta-lactamase producing Klebsiella oxytoca
Extended spectrum beta-lactamase producing Klebsiella pneumoniae

Extended spectrum beta-lactamase producing Proteus mirabilis

Extended spectrum beta-lactamase producing Shigella sonnei
Facklamia
Facklamia hominis
Facklamia ignava
Facklamia languida
Facklamia sourekii
Facklamia tabacinasalis
Faecalibacterium
Faecalibacterium prausnitzii
Falcivibrio grandis
Falcivibrio vaginalis
Filifactor
Filifactor alocis
Filifactor villosus
Finegoldia
Finegoldia magna
Fissuricella filamenta
Flavimonas oryzihabitans
Flavivirus
Flavobacterium
Flavobacterium arborescens
Flavobacterium aureum
Flavobacterium breve
Flavobacterium devorans
Flavobacterium gleum
Flavobacterium heparinum
Flavobacterium indologenes
Flavobacterium marinotypicum
Flavobacterium maritypicum
Flavobacterium meningosepticum
Flavobacterium mitzutaii
Flavobacterium multivorum
Flavobacterium odoratum
Flavobacterium paucimobilis
Flavobacterium spiritivorum
Flavobacterium thalpophilum
Flavobacterium yabuuchiae
Flavonifractor
Flavonifractor plautii
Fluoribacter
Fluoribacter bozemanae
Fluoribacter dumoffii
Fluoribacter gormanii
Fonsecaea
Fonsecaea compacta
Fonsecaea compactum
Fonsecaea dermatitidis
Fonsecaea pedrosoi
Francisella
Francisella tularensis
Fungi
Fusarium
Fusarium chlamydosporum
Fusarium culmorum
Fusarium dimerum
Fusarium graminearum
Fusarium javanicum
Fusarium moniforme var intermedium
Fusarium oxysporum
Fusarium poae
Fusarium proliferatum
Fusarium roseum
Fusarium semitectum
Fusarium solani
Fusarium sporotrichioides
Fusarium tricinctum
Fusarium tricintum
Fusarium verticillioides
Fusicoccum dimidiatum
Fusobacterium
Fusobacterium alocis
Fusobacterium canifelinum
Fusobacterium equinum
Fusobacterium gonidiaformans
Fusobacterium mortiferum
Fusobacterium naviforme
Fusobacterium necrogenes
Fusobacterium necrophorum
Fusobacterium necrophorum fundiliforme
Fusobacterium necrophorum necrophorum
Fusobacterium nucleatum
Fusobacterium nucleatum fusiforme
Fusobacterium nucleatum nucleatum
Fusobacterium nucleatum polymorphum
Fusobacterium periodonticum
Fusobacterium plauti
Fusobacterium polymorphum
Fusobacterium prausnitzii
Fusobacterium russii
Fusobacterium sulci
Fusobacterium ulcerans
Fusobacterium varium
Gallicola
Gallicola barnesae
Gamma (non)-hemolytic streptococcus
Gardnerella
Gardnerella vaginalis
Gemella
Gemella bergeriae
Gemella haemolysans
Gemella morbillorum
Gemella sanguinis
Geobacillus
Geobacillus stearothermophilus
Geobacillus thermodenitrificans
Geobacillus thermoglucosidasius
Geotrichum
Geotrichum candidum
Geotrichum klebahnii
Geotrichum penicillatum
German measles virus
Giardia
Giardia duodenalis
Giardia intestinalis
Giardia lamblia
Glenosporella
Gliocladium
Globicatella
Globicatella sanguinis
Globicatella sulfidifaciens
Gordonia
Gordonia bronchialis
Gordonia otitidis
Gordonia polyisoprenivorans
Gordonia rubripertincta
Gordonia rubropertinctus
Gordonia sputi
Gordonia terrae
Gram-negative bacillus
Gram-negative bacillus, fermentative
Gram-negative bacillus, non-fermentative
Gram-negative coccobacillus
Gram-negative coccus
Gram-negative diplococcus
Gram-negative pleomorphic bacillus
Gram-positive bacillus
Gram-positive coccobacillus
Gram-positive coccus
Gram-positive diplococcus
Gram-variable bacillus
Gram-variable coccobacillus
Gram-variable coccus
Granulicatella
Granulicatella adiacens
Granulicatella elegans
Graphium
Grimontia
Grimontia hollisae
Haemophilus
Haemophilus actinomycetemcomitans
Haemophilus aegyptius
Haemophilus aphrophilus
Haemophilus canis
Haemophilus ducreyi
Haemophilus haemoglobinophilus
Haemophilus haemolyticus
Haemophilus influenzae
Haemophilus parahaemolyticus
Haemophilus parainfluenzae
Haemophilus pittmaniae
Haemophilus segnis
Hafnia
Hafnia alvei
Halomonas
Halomonas venusta
Hansenula angusta
Hansenula anomala
Hansenula fabianii
Hansenula polymorpha
Hartmannella
Helcococcus
Helcococcus kunzii
Helcococcus sueciensis
Helicobacter
Helicobacter acinonychis
Helicobacter acinonyx
Helicobacter aurati
Helicobacter bilis
Helicobacter bizzozeroni
Helicobacter canadensis
Helicobacter canis
Helicobacter cholecystus
Helicobacter cinaedi
Helicobacter felis
Helicobacter fennelliae
Helicobacter ganmani
Helicobacter hepaticus
Helicobacter mesocricetorum
Helicobacter muridarum
Helicobacter mustelae
Helicobacter nemestrinae
Helicobacter pametensis
Helicobacter pullorum
Helicobacter pylori
Helicobacter rappini
Helicobacter rodentium
Helicobacter salomonis
Helicobacter trogontum
Helicobacter typhlonius
Helminthosporium
Helminthosporium australiensis
Helminthosporium halodes
Helminthosporium hawaiiensis
Helminthosporium rostratum
Helminthosporium spiciferum
Hemophilus pertussis
Hepatitis A virus
Hepatitis B virus
Hepatitis C virus
Hepatitis D virus
Hepatitis E virus
Hepatitis G virus
Herbaspirillum
Herpesviridae
Herpesvirus
Heterophyes
Heterophyes heterophyes
Holdemania
Holdemania filiformis
Hormiscium dermatitidis
Hormodendrum
Hormodendrum dermatitidis
Hormonema
Hormonema dermatoides
Hortaea werneckii
Human (beta) herpes virus 5
Human adenovirus
Human coronavirus
Human coxsackievirus
Human coxsackievirus A
Human coxsackievirus B
Human cytomegalovirus 5
Human echovirus
Human herpes simplex virus
Human herpes simplex virus type 1
Human herpes simplex virus type 2
Human herpesvirus 3
Human herpesvirus 4
Human Herpesvirus 6
Human Herpesvirus 8
Human immunodeficiency virus type 2
Human immunodeficiency virus type I
Human metapneumovirus
Human papillomavirus
Human parainfluenza viruses
Human poliovirus
Human respiratory syncytial virus
Human rhinovirus
Human T-lymphotropic virus 1
Human T-lymphotropic virus 2
Hydatigera
Hymenolepis
Ignavigranum
Ignavigranum ruoffiae
Influenza A virus
Influenza A virus subtype H1N1
Influenza B virus
Influenza C virus
Influenza virus
Inquilinus
Inquilinus limosus
Isospora
Janibacter
Janibacter hoylei
JC virus
Jonesia
Jonesia denitrificans
Kerstersia
Kerstersia gyiorum
Kingella
Kingella denitrificans
Kingella indologenes
Kingella kingae
Kingella oralis
Kingella potus
Klebsiella
Klebsiella aerogenes
Klebsiella granulomatis
Klebsiella ornithinolytica
Klebsiella oxytoca
Klebsiella ozaenae
Klebsiella planticola
Klebsiella pneumoniae
Klebsiella pneumoniae ozaenae
Klebsiella pneumoniae pneumoniae
Klebsiella pneumoniae rhinoscleromatis
Klebsiella rhinoscleromatis
Klebsiella singaporensis
Klebsiella terrigena
Klebsiella trevisanii
Klebsiella variicola
Kloeckera
Kluyvera
Kluyvera ascorbata
Kluyvera cryocrescens
Kluyvera georgiana
Kluyvera intermedia
Kluyveromyces
Kluyveromyces fragilis
Kluyveromyces lactis
Kluyveromyces marxianus
Kocuria
Kocuria erythromyxa
Kocuria kristinae
Kocuria rosea
Kocuria varians
Kodamaea
Kodamaea ohmeri
Kosakonia
Kosakonia cowanii
Koserella trabulsii
Kroppenstedtia
Kroppenstedtia eburnea
Kurthia
Kurthia bessoni
Kytococcus
Kytococcus sedentarius
Lachancea
Lachancea fermentati
Lachnoanaerobaculum
Lachnoanaerobaculum orale
Lactobacillus
Lactobacillus acidophilus
Lactobacillus amylovorus
Lactobacillus antri
Lactobacillus arizonensis
Lactobacillus brevis
Lactobacillus buchneri
Lactobacillus casei
Lactobacillus catenaformis
Lactobacillus cellobiosus
Lactobacillus confusus
Lactobacillus crispatus
Lactobacillus delbrueckii
Lactobacillus fermentum
Lactobacillus gasseri
Lactobacillus gastricus
Lactobacillus iners
Lactobacillus jensenii
Lactobacillus johnsonii
Lactobacillus kalixensis
Lactobacillus minutus
Lactobacillus oris
Lactobacillus paracasei
Lactobacillus plantarum
Lactobacillus reuteri
Lactobacillus rhamnosus
Lactobacillus rimae
Lactobacillus sakei
Lactobacillus salivarius
Lactobacillus ultunensis
Lactobacillus vaginalis
Lactobacillus vitulinus
Lactococcus
Lactococcus garvieae
Lactococcus lactis
Lasiodiplodia
Lasiodiplodia theobromae
Lassa virus
Leclercia
Leclercia adecarboxylata
Lecythophora
Lecythophora hoffmannii
Lecythophora mutabilis
Legionella
Legionella adelaidensis
Legionella anisa
Legionella beliardensis
Legionella birminghamensis
Legionella bozemanae
Legionella brunensis
Legionella busanensis
Legionella cherrii
Legionella cincinnatiensis
Legionella drancourtii
Legionella drozanskii
Legionella dumoffii
Legionella erythra
Legionella fairfieldensis
Legionella fallonii
Legionella feeleii
Legionella geestiana
Legionella gormanii
Legionella hackeliae
Legionella israelensis
Legionella jamestowniensis
Legionella jordanis
Legionella lansingensis
Legionella londiniensis
Legionella longbeachae
Legionella lytica
Legionella maceachernii
Legionella micdadei
Legionella moravica
Legionella nautarum
Legionella oakridgensis
Legionella parisiensis
Legionella pittsburghensis
Legionella pneumophila
Legionella quateirensis
Legionella quinlivanii
Legionella rowbothamii
Legionella rubrilucens
Legionella sainthelensi
Legionella santicrucis
Legionella shakespearei
Legionella spiritensis
Legionella steigerwaltii
Legionella taurinensis
Legionella tucsonensis
Legionella wadsworthii
Legionella waltersii
Legionella worsleiensis
Leifsonia
Leifsonia aquatica
Leifsonia xyli
Leishmania
Lelliottia
Lelliottia amnigena
Lelliottia nimipressuralis
Leminorella
Leminorella grimontii
Leminorella richardii
Leptosphaeria
Leptosphaeria senegalensis
Leptosphaeria tompkinsii
Leptospira
Leptospira interrogans
Leptotrichia
Leptotrichia aerogenes
Leptotrichia buccalis
Leptotrichia goodfellowii
Leptotrichia trevisanii
Leptotrichia wadei
Leuconostoc
Leuconostoc amelibiosum
Leuconostoc citreum
Leuconostoc lactis
Leuconostoc mesenteroides
Leuconostoc pseudomesenteroides
Levinea amalonatica
Levinea malonitica
Listeria
Listeria denitrificans
Listeria grayi
Listeria innocua
Listeria ivanovii
Listeria monocytogenes
Listeria seeligeri
Listeria welshimeri
Listonella
Loboa
Lodderomyces
Lodderomyces elongisporus
Lucibacterium harveyi
Lymphocytic choriomeningitis virus
Macrococcus
Macrococcus bovicus
Macrococcus carouselicus
Macrococcus caseolyticus
Macrococcus equipercicus
Macrosporium
Madurella
Madurella grisea
Madurella mycetomatis
Madurella mycetomi
Malassezia
Malassezia furfur
Malassezia globosa
Malassezia ovale
Malassezia pachydermatis
Malassezia restricta
Malassezia sympodialis
Malbranchea
Mannheimia
Mannheimia haemolytica
Marburgvirus
Massilia
Massilia timonae
Mastadenovirus
Measles virus
Megamonas
Megamonas hypermegale
Megamonas hypermegas
Megasphaera
Megasphaera elsdenii
Metarhizium
Metarhizium anisopliae
Methicillin-resistant Staphylococcus aureus
Methylobacterium
Methylobacterium mesophilicum
Methylobacterium zatmanii
Meyerozyma
Meyerozyma guilliermondii
Microbacterium
Microbacterium arborescens
Microbacterium hydrocarbonoxydans
Microbacterium imperiale
Microbacterium lacticum
Microbacterium liquefaciens
Microbacterium maritypicum
Microbacterium oxydans
Microbacterium paraoxydans
Microbacterium resistens
Micrococcus
Micrococcus antarcticus
Micrococcus flavus
Micrococcus halobius
Micrococcus kristinae
Micrococcus luteus
Micrococcus lylae
Micrococcus lysodeikticus
Micrococcus niger
Micrococcus nishinomiyaensis
Micrococcus roseus
Micrococcus sedentarius
Micromonospora
Micromonospora chalcea
Micropolyspora brevicatena
Microsporidium
Microsporum
Microsporum brachytomum
Mitsuokella
Mitsuokella dentalis
Mitsuokella multacida
Mobiluncus
Mobiluncus curtisii
Mobiluncus mulieris
Moellerella
Moellerella wisconsensis
Mogibacterium
Mogibacterium diversum
Mogibacterium neglectum
Mogibacterium timidum
Mogibacterium vescum
Mold
Molluscum contagiosum virus
Monkeypox virus
Monosporium apiospermum
Moraxella
Moraxella anatipestifer
Moraxella atlantae
Moraxella boevrei
Moraxella bovis
Moraxella canis
Moraxella caprae
Moraxella catarrhalis
Moraxella cuniculi
Moraxella kingae
Moraxella kingii
Moraxella lacunata
Moraxella lincolnii
Moraxella liquefaciens
Moraxella nonliquefaciens
Moraxella oblonga
Moraxella osloensis
Moraxella ovis
Moraxella phenylpyruvica
Moraxella urethralis
Morbillivirus
Morganella
Morganella morganii
Morganella morganii sibonii
Mortierella
Mortierella wolfii
Mucor
Mucor circinelloides
Mucor hiemalis
Mucor janssenii
Mucor javanicus
Mucor pusillus
Mucor racemosus
Mucor ramosissimus
Mucor rouxians
multidrug resistant Achromobacter xylosoxidans
multidrug resistant Acinetobacter
multidrug resistant Enterobacter asburiae
multidrug resistant Klebsiella pneumoniae
multidrug resistant Morganella morganii
multidrug resistant Pseudomonas aeruginosa
multiple drug-resistant Enterobacter cloacae
multiple drug-resistant Proteus mirabilis
Mumps virus
Mycelia sterilia
Mycobacterium
Mycobacterium abscessus
Mycobacterium africanum
Mycobacterium agri
Mycobacterium aichiense
Mycobacterium alvei
Mycobacterium aquae
Mycobacterium asiaticum
Mycobacterium aurum
Mycobacterium austroafricanum
Mycobacterium avium
Mycobacterium avium complex
Mycobacterium balnei
Mycobacterium boenickei
Mycobacterium bohemicum
Mycobacterium bovis
Mycobacterium branderi
Mycobacterium brisbanense
Mycobacterium brumae
Mycobacterium brunense
Mycobacterium canariasense
Mycobacterium canetti
Mycobacterium caprae
Mycobacterium celatum
Mycobacterium chelonae
Mycobacterium chesapeaki
Mycobacterium chitae
Mycobacterium chlorophenolicum
Mycobacterium chubuense
Mycobacterium confluentis
Mycobacterium conspicuum
Mycobacterium cookii
Mycobacterium cosmeticum
Mycobacterium diernhoferi
Mycobacterium doricum
Mycobacterium duvalii
Mycobacterium elephantis
Mycobacterium fallax
Mycobacterium farcinogenes
Mycobacterium flavescens
Mycobacterium fortuitum
Mycobacterium fortuitum complex
Mycobacterium fortuitum-chelonae complex
Mycobacterium frederiksbergense
Mycobacterium gadium
Mycobacterium gastri
Mycobacterium genavense
Mycobacterium giae
Mycobacterium gilvum
Mycobacterium goodii
Mycobacterium gordonae
Mycobacterium habana
Mycobacterium haemophilum
Mycobacterium hassiacum
Mycobacterium heckeshornense
Mycobacterium heidelbergense
Mycobacterium hiberniae
Mycobacterium hodleri
Mycobacterium holsaticum
Mycobacterium houstonense
Mycobacterium immunogenum
Mycobacterium interjectum
Mycobacterium intermedium
Mycobacterium intracellulare
Mycobacterium johnei
Mycobacterium kansasii
Mycobacterium komossense
Mycobacterium kubicae
Mycobacterium lacticola
Mycobacterium lacus
Mycobacterium lentiflavum
Mycobacterium leprae
Mycobacterium luciflavum
Mycobacterium madagascariense
Mycobacterium mageritense
Mycobacterium malmoense
Mycobacterium marinum
Mycobacterium microti
Mycobacterium minetti
Mycobacterium montefiorense
Mycobacterium moriokaense
Mycobacterium mucogenicum
Mycobacterium murale
Mycobacterium neoaurum
Mycobacterium neworleansense
Mycobacterium nonchromogenicum
Mycobacterium novocastrense
Mycobacterium obuense
Mycobacterium palustre
Mycobacterium parafortuitum
Mycobacterium parascrofulaceum
Mycobacterium paratuberculosis
Mycobacterium parmense
Mycobacterium peregrinum
Mycobacterium phlei
Mycobacterium phocaicum
Mycobacterium pinnipedii
Mycobacterium platypoecilus
Mycobacterium porcinum
Mycobacterium psychrotolerans
Mycobacterium rhodesiae
Mycobacterium scrofulaceum
Mycobacterium septicum
Mycobacterium sherrisii
Mycobacterium shimoidei
Mycobacterium shottsii
Mycobacterium simiae
Mycobacterium smegmatis
Mycobacterium sphagni
Mycobacterium szulgai
Mycobacterium terrae
Mycobacterium terrae complex
Mycobacterium thermoresistibile
Mycobacterium tokaiense
Mycobacterium triplex
Mycobacterium triviale
Mycobacterium tuberculosis
Mycobacterium tuberculosis complex
Mycobacterium tusciae
Mycobacterium ulcerans
Mycobacterium vaccae
Mycobacterium vanbaalenii
Mycobacterium wolinskyi
Mycobacterium xenopi
Mycobacterium, avium-intracellulare group
Mycoplasma
Mycoplasma buccale
Mycoplasma faucium
Mycoplasma fermentans
Mycoplasma genitalium
Mycoplasma hominis
Mycoplasma incognitus
Mycoplasma lipophilum
Mycoplasma orale
Mycoplasma penetrans
Mycoplasma pirum
Mycoplasma pneumoniae
Mycoplasma primatum
Mycoplasma salivarium
Mycoplasma spermatophilum
Mycotorula lipolytica
Myroides
Myroides odoratus
Naegleria
Nakazawaea
Nannizzia
Necator
Neisseria
Neisseria canis
Neisseria catarrhalis
Neisseria cinerea
Neisseria cuniculi
Neisseria dentiae
Neisseria elongata
Neisseria elongata elongata
Neisseria elongata glycolytica
Neisseria elongata nitroreducens
Neisseria flavescens
Neisseria gonorrhoeae
Neisseria iguanae
Neisseria lactamica
Neisseria macacae
Neisseria meningitidis
Neisseria mucosa
Neisseria oralis
Neisseria ovis
Neisseria parelongata
Neisseria perflava
Neisseria polysaccharea
Neisseria sicca
Neisseria subflava
Neisseria weaveri
Neorickettsia
Neorickettsia sennetsu
Neosartorya
Neosartorya fischeri
Neoscytalidium dimidiatum
Nesterenkonia
Nesterenkonia halobia
Nigrospora
Nocardia
Nocardia abscessus
Nocardia africana
Nocardia anaemiae
Nocardia aobensis
Nocardia araoensis
Nocardia arthritidis
Nocardia asiatica
Nocardia asteroides
Nocardia asteroides complex
Nocardia beijingensis
Nocardia brasiliensis
Nocardia brevicatena
Nocardia carnea
Nocardia caviae
Nocardia cyriacigeorgica
Nocardia elegans
Nocardia farcinica
Nocardia higoensis
Nocardia inohanensis
Nocardia kruczakiae
Nocardia mexicana

Nocardia niigatensis
Nocardia nova
Nocardia orientalis
Nocardia otitidiscaviarum
Nocardia otitis caviarum
Nocardia paucivorans
Nocardia pneumoniae
Nocardia pseudobrasiliensis
Nocardia sienata
Nocardia testacea
Nocardia transvalensis
Nocardia veterana
Nocardia yamanashiensis
Nocardiopsis
Nocardiopsis dassonvillei
Nocardiopsos synnemataformans
Norovirus
Norwalk virus
Nutritionally variant streptococci
Obesumbacterium
Obesumbacterium proteus
Ochrobactrum
Ochrobactrum anthropi
Ochrobactrum intermedium
Ochroconis
Ochroconis constricta
Ochroconis gallopava
Ochroconis gallopavum
Ochroconis humicola
Odoribacter
Odoribacter splanchnicus
Oerskovia
Ogataea
Ogataea angusta
Ogataea polymorpha
Oidiodendron
Oligella
Oligella ureolytica
Oligella urethralis
Oospora lactis
Orbivirus
Orf virus
Orientia
Orientia tsutsugamushi
Orthoreovirus
Paecilomyces
Paecilomyces javanicus
Paecilomyces lilacinus
Paecilomyces marquandii
Paecilomyces variotii
Paenibacillus
Paenibacillus agaridevorans
Paenibacillus alvei
Paenibacillus edaphicus
Paenibacillus gordonae
Paenibacillus larvae
Paenibacillus lentimorbus
Paenibacillus macerans
Paenibacillus pabuli
Paenibacillus polymyxa
Paenibacillus popilliae
Paenibacillus provencensis
Paenibacillus thiaminolyticus
Paenibacillus urinalis
Paenibacillus validus
Pandoraea
Pandoraea apista
Pandoraea norimbergensis
Pandoraea pnomenusa
Pandoraea pulmonicola
Pandoraea sputorum
Pantoea
Pantoea agglomerans
Pantoea ananas
Pantoea ananatis
Pantoea dispersa
Parabacteroides
Parabacteroides distasonis
Parabacteroides goldsteinii
Parabacteroides merdae
Paraburkholderia
Paraburkholderia fungorum
Paracoccus
Paracoccus yeei
Parascardovia
Parascardovia denticolens
Parvimonas
Parvimonas micra
Parvovirus
Pasteurella
Pasteurella aerogenes
Pasteurella bettyae
Pasteurella caballi
Pasteurella canis
Pasteurella dagmatis
Pasteurella haemolytica
Pasteurella multocida
Pasteurella multocida gallicida
Pasteurella multocida multocida
Pasteurella multocida septica
Pasteurella pneumotropica
Pasteurella stomatis
Pasteurella ureae
Patulibacter
Pectobacterium
Pediculus humanus
Pediococcus
Pediococcus acidilactici
Pediococcus pentosaceus
Pediococcus urinaeequi
Pedobacter
Pedobacter heparinus
Pedobacter piscium
Penicillium
Penicillium citrinum
Penicillium commune
Penicillium decumbens
Penicillium expansum
Penicillium griseofulvum
Penicillium lilacinum
Penicillium marneffei
Penicillium patulum
Penicillium puberulum
Penicillium rubrum
Penicillium spinulosum
Penicillium verruculosum
Penicillium viridicatum
Peptococcus
Peptococcus asaccharolyticus
Peptococcus niger
Peptococcus saccharolyticus
Peptoniphilus
Peptoniphilus asaccharolyticus
Peptoniphilus harei
Peptoniphilus ivorii
Peptoniphilus lacrimalis
Peptostreptococcus
Peptostreptococcus anaerobius
Peptostreptococcus asaccharolyticus
Peptostreptococcus elsdenii
Peptostreptococcus hydrogenalis
Peptostreptococcus lactolyticus
Peptostreptococcus magnus
Peptostreptococcus micros
Peptostreptococcus octavius
Peptostreptococcus parvulus
Peptostreptococcus prevotii
Peptostreptococcus productus
Peptostreptococcus tetradius
Peptostreptococcus vaginalis
Petriellidium boydii
Petriellidum boydii
Phaeoacremonium
Phaeoacremonium parasiticum
Phaeoannellomyces
Phaeoannellomyces werneckii
Phaeoannelomyces werneckii
Phaeococcomyces
Phaeococcomyces exophialae
Phialemonium
Phialemonium curvatum
Phialemonium dimorphosporum
Phialemonium obovatum
Phialophera mutabilis
Phialophora
Phialophora americana

Phialophora compacta
Phialophora compactum
Phialophora dermatitidis
Phialophora europaea

Phialophora gougerotii
Phialophora hoffmannii
Phialophora jeanselmei
Phialophora pedrosoi
Phialophora richardsiae
Phialophora spinifera
Phialophora verrucosa
Phoma
Photobacterium
Photobacterium damselae damselae
Photorhabdus
Photorhabdus asymbiotica
Photorhabdus luminescens
Photorhabdus temperata
Pichia
Pichia angusta
Pichia anomala
Pichia fabianii
Pichia farinosa
Pichia guilliermondii
Pichia kudriavzevii
Pichia ohmeri
Pichia polymorpha
Picornavirus group
Piedraia
Piedraia hortae
Pithomyces
Pityrosporum
Pityrosporum canis
Pityrosporum furfur
Pityrosporum orbiculare
Pityrosporum ovale
Pityrosporum pachydermatis
Plasmodium
Plasmodium falciparum
Plasmodium knowlesi
Plasmodium malariae
Plasmodium ovale
Plasmodium vivax
Plesiomonas
Plesiomonas shigelloides
Pleurostomophora
Pleurostomophora richardsiae
Pluralibacter
Pluralibacter gergoviae
Pluralibacter pyrinus
Polyomavirus
Porphyromonas
Porphyromonas asaccharolyticus
Porphyromonas cangingivalis
Porphyromonas canoris
Porphyromonas cansulci
Porphyromonas catoniae
Porphyromonas circumdentaria
Porphyromonas crevioricanis
Porphyromonas endodontalis
Porphyromonas gingivalis
Porphyromonas gingivicanis
Porphyromonas gulae
Porphyromonas levii
Porphyromonas macacae
Porphyromonas salivosa
Porphyromonas somerae
Poxviridae
Pragia
Pragia fontium
Prevotella
Prevotella bivia
Prevotella buccae
Prevotella buccalis
Prevotella corporis
Prevotella dentalis
Prevotella denticola
Prevotella disiens
Prevotella enoeca
Prevotella heparinolytica
Prevotella intermedia
Prevotella loescheii
Prevotella marshii
Prevotella melaninogenica
Prevotella multiformis
Prevotella multisaccharivorax
Prevotella nigrescens
Prevotella oralis
Prevotella oralis group
Prevotella oris
Prevotella oulora
Prevotella oulorum
Prevotella pallens
Prevotella ruminicola
Prevotella salivae
Prevotella shahii
Prevotella tannerae
Prevotella veroralis
Prevotella zoogleoformans
Propionibacterium
Propionibacterium acidipropionici
Propionibacterium acnes
Propionibacterium australiense
Propionibacterium avidum
Propionibacterium cyclohexanicum
Propionibacterium freudenreichii
Propionibacterium granulosum
Propionibacterium innocuum
Propionibacterium jensenii
Propionibacterium lymphophilum
Propionibacterium microaerophilum
Propionibacterium prionicus
Propionibacterium propionicum
Propionibacterium rubrum
Propionibacterium thoenii
Propioniferax
Propioniferax innocus
Propionimicrobium
Propionimicrobium lymphophilum
Proteus
Proteus hauseri
Proteus inconstans, subgroup A
Proteus mirabilis
Proteus myxofaciens
Proteus penneri
Proteus rettgeri
Proteus vulgaris
Prototheca
Prototheca filamenta
Prototheca wickerhamii
Prototheca zopfii
Protozoan
Providencia
Providencia alcalifaciens
Providencia friedericiana
Providencia heimbachae
Providencia rettgeri
Providencia rustigianii
Providencia stuartii
Pseudallescheria
Pseudallescheria boydii
Pseudoallescheria
Pseudoallescheria boydii
Pseudoclavibacter
Pseudoflavonifractor
Pseudoflavonifractor capillosus
Pseudomonas
Pseudomonas acidovorans
Pseudomonas aeruginosa
Pseudomonas alcaligenes
Pseudomonas alliicola
Pseudomonas antimicrobica
Pseudomonas beteli
Pseudomonas betle
Pseudomonas cepacia
Pseudomonas chloritidismutans
Pseudomonas chlororaphis
Pseudomonas cocovenenans
Pseudomonas delafieldii
Pseudomonas diminuta
Pseudomonas facilis
Pseudomonas fluorescens
Pseudomonas gladioli
Pseudomonas luteola
Pseudomonas mallei
Pseudomonas maltophilia
Pseudomonas marginalis
Pseudomonas mendocina
Pseudomonas monteilii
Pseudomonas mosselii
Pseudomonas multivorans
Pseudomonas odorans
Pseudomonas oryzihabitans
Pseudomonas paucimobilis
Pseudomonas perfectomarina
Pseudomonas pertucinogena
Pseudomonas pickettii
Pseudomonas pseudoalcaligenes
Pseudomonas pseudomallei
Pseudomonas putida
Pseudomonas putrefaciens
Pseudomonas pyrrocinia
Pseudomonas stutzeri
Pseudomonas testosteroni
Pseudomonas veronii
Pseudomonas vesicularis
Pseudoramibacter
Pseudoramibacter alactolyticus
Pseudoxanthomonas
Pseudoxanthomonas koreensis
Pseudozyma
Pseudozyma aphidids
Psychrobacillus
Psychrobacter
Psychrobacter immobilis
Psychrobacter phenylpyruvicus
Pullularia
Pullularia pullulans
Pustular dermatitis virus
Pyrenochaeta
Pyrenochaeta romeroi
Rabies virus
Rahnella
Rahnella aquatilis
Ralstonia
Ralstonia gilardii
Ralstonia insidiosa
Ralstonia mannitolilytica
Ralstonia pickettii
Ralstonia respiraculi
Ramichloridium cerophilum
Raoultella
Raoultella ornithinolytica
Raoultella planticola
Raoultella terrigena
Rapid growing mycobacteria
Reovirus group
Respirovirus
Rhabdovirus
Rhinocladiella
Rhinocladiella aquaspersa
Rhinocladiella atrovirens
Rhinocladiella compacta
Rhinocladiella compactum
Rhinocladiella pedrosoi
Rhinocladiella spinifera
Rhinosporidium
Rhizobium
Rhizobium radiobacter
Rhizobium rubi
Rhizobium vitis
Rhizomucor
Rhizomucor miehei
Rhizomucor pusillus
Rhizopus
Rhizopus arrhizus
Rhizopus microsporus
Rhizopus nigricans
Rhizopus oryzae
Rhizopus stolonifer
Rhodococcus
Rhodococcus aurantiacus
Rhodococcus bronchialis
Rhodococcus chlorophenolicus
Rhodococcus chubuensis
Rhodococcus equi
Rhodococcus erythropolis
Rhodococcus fascians
Rhodococcus globerulus
Rhodococcus gordoniae
Rhodococcus luteus
Rhodococcus obuensis
Rhodococcus rhodochrous
Rhodococcus roseus
Rhodococcus rubropertinctus
Rhodococcus terrae
Rhodotorula
Rhodotorula glutinis
Rhodotorula minuta
Rhodotorula mucilaginosa
Rhodotorula pilimanae
Rhodotorula rubra
Rickettsia
Rickettsia akari
Rickettsia conorii
Rickettsia parkeri
Rickettsia prowazekii
Rickettsia quintana
Rickettsia rickettsii
Rickettsia sibirica
Rickettsia tsutsugamushi
Rickettsia typhi
Riemerella
Riemerella anatipestifer
Rift Valley fever virus
Robinsoniella
Robinsoniella peoriensis
Rochalimaea elizabethae
Rochalimaea henselae
Rochalimaea quintana
Rochalimaea vinsonii
Roseomonas
Roseomonas cervicalis
Roseomonas gilardii
Roseomonas mucosa
Rotavirus
Rothia
Rothia aeria
Rothia dentocariosa
Rothia mucilaginosa
Rubella virus
Rubeola virus
Rubivirus
Ruminococcus
Ruminococcus gnavus
Ruminococcus hansenii
Ruminococcus productus
Rummeliibacillus
Rummeliibacillus pycnus
Saccharomonospora
Saccharomonospora glauca
Saccharomonospora viridis
Saccharomyces
Saccharomyces cerevisiae
Saccharopolyspora
Saccharopolyspora rectivirgula
Saksenaea
Saksenaea vasiformis
Salivary gland virus
Salmonella
Salmonella bongori
Salmonella enterica
Saprochaete
Sarcina
Sarcina luteus
Sarcina ventriculi
Sarcinomyces inkin
Sarcinomyces werneckii
Sarcinosporon
Sarcinosporon inkin
Sarcocystis
Sarcocystis hominis
Sarcocystis lindemanni
Sarcocystis suihominis
Sarcoptes scabiei
SARS-CoV-2
Scabies mite
Scardovia
Scardovia inopinata
Scedosporium
Scedosporium apiospermum
Scedosporium boydii
Scedosporium inflatum
Scedosporium prolificans
Schizophyllum
Schizophyllum commune
Schwanniomyces
Schwanniomyces polymorphus
Scolecobasidium
Scolecobasidium constrictum
Scolecobasidium humicola
Scopulariopsis
Scopulariopsis acremonium
Scopulariopsis brevicaulis
Scopulariopsis brumptii
Scopulariopsis candida
Scytalidium
Scytalidium dimidiatum
Scytalidium hyalinum
Selenomonas
Selenomonas artemidis
Selenomonas dianae
Selenomonas flueggei
Selenomonas infelix
Selenomonas noxia
Selenomonas sputigena
Sepedonium
Serpulina
Serpulina pilosicoli
Serratia
Serratia entomophila
Serratia ficaria
Serratia fonticola
Serratia grimesii
Serratia liquefaciens
Serratia marcescens
Serratia marinorubra
Serratia odorifera
Serratia plymuthica
Serratia proteamaculans
Serratia quinivorans
Serratia rubidaea
Serratia ureilytica
Shewanella
Shewanella algae
Shewanella putrefaciens
Shigella
Shigella boydii
Shigella dysenteriae
Shigella flexneri
Shigella sonnei
Simian Virus 40
Simonsiella
Simonsiella crassa
Simonsiella muelleri
Slackia
Slackia exigua
Slackia heliotrinireducens
Small-colony-forming beta-hemolytic group A streptococci
Small-colony-forming beta-hemolytic group C streptococci
Small-colony-forming beta-hemolytic group G streptococci
Smallpox virus
Sneathia
Sneathia sanguinegens
Solibacillus
Solibacillus silvestris
Solobacterium
Solobacterium moorei
Sphingobacterium
Sphingobacterium faecium
Sphingobacterium heparinum
Sphingobacterium mizutae
Sphingobacterium multivorum
Sphingobacterium piscium
Sphingobacterium spiritivorum
Sphingobacterium thalpophilum
Sphingomonas
Sphingomonas parapaucimobilis
Sphingomonas paucimobilis
Spirillum
Sporobolomyces
Sporobolomyces roseus
Sporobolomyces salmonicolor
Sporolactobacillus
Sporolactobacillus laevolacticus
Sporopachydermia
Sporosarcina
Sporothrix
Sporothrix cyanescens
Sporothrix schenckii
Sporothrix schenkii
Sporotrichum
Sporotrichum beurmannii
Sporotrichum pruinosum
Sporotrichum schenckii
Sporotrichum schenkii
St Louis encephalitis virus
Stachybotrys
Stachybotrys chartarum
Staphylococcus
Staphylococcus arlettae
Staphylococcus aureus
Staphylococcus auricularis
Staphylococcus capitis
Staphylococcus capitis capitis
Staphylococcus capitis urealyticus
Staphylococcus caprae
Staphylococcus carnosus
Staphylococcus carnosus carnosus
Staphylococcus carnosus utilis
Staphylococcus caseolyticus
Staphylococcus chromogenes
Staphylococcus cohnii
Staphylococcus cohnii cohnii
Staphylococcus cohnii urealyticus
Staphylococcus condimenti
Staphylococcus delphini
Staphylococcus epidermidis
Staphylococcus equorum
Staphylococcus equorum equorum
Staphylococcus equorum linens
Staphylococcus felis
Staphylococcus fleurettii
Staphylococcus gallinarum
Staphylococcus haemolyticus
Staphylococcus hominis
Staphylococcus hominis hominis
Staphylococcus hominis novobiosepticus
Staphylococcus hyicus
Staphylococcus hyicus chromogenes
Staphylococcus hyicus hyicus
Staphylococcus intermedius
Staphylococcus kloosii
Staphylococcus lentus
Staphylococcus lugdunensis
Staphylococcus lutrae
Staphylococcus muscae
Staphylococcus nepalensis
Staphylococcus parvulus
Staphylococcus pasteuri
Staphylococcus pettenkoferi
Staphylococcus piscifermentans
Staphylococcus pseudintermedius
Staphylococcus pulvereri
Staphylococcus saccharolyticus
Staphylococcus saprophyticus
Staphylococcus saprophyticus bovis
Staphylococcus saprophyticus saprophyticus
Staphylococcus schleiferi
Staphylococcus schleiferi coagulans
Staphylococcus schleiferi schleiferi
Staphylococcus sciuri
Staphylococcus sciuri carnaticus
Staphylococcus sciuri lentus
Staphylococcus sciuri rodentium
Staphylococcus scuiri scuiri
Staphylococcus simulans
Staphylococcus succinus
Staphylococcus succinus casei
Staphylococcus succinus succinus
Staphylococcus vitulinus
Staphylococcus warneri
Staphylococcus xylosus
Staphylococcus, coagulase negative
Staphylococcus, coagulase positive
Stemphylium
Stenotrophomonas
Stenotrophomonas maltophilia
Stephanoascus
Stephanoascus ciferrii
Stomatococcus mucilaginosus
Streptobacillus
Streptobacillus moniliformis
Streptococcus
Streptococcus acidominimus
Streptococcus adjacens
Streptococcus agalactiae (group B streptococci)
Streptococcus alactolyticus
Streptococcus anginosis milleri group
Streptococcus anginosus
Streptococcus anginosus group
Streptococcus anginosus-constellatus
Streptococcus australis
Streptococcus avium
Streptococcus bovis group
Streptococcus canis
Streptococcus caprinus
Streptococcus casseliflavus
Streptococcus cecorum
Streptococcus constellatus
Streptococcus constellatus constellatus
Streptococcus constellatus pharyngis
Streptococcus criceti
Streptococcus cristatus
Streptococcus defectivus
Streptococcus dentisani
Streptococcus downei
Streptococcus durans
Streptococcus dysgalactiae
Streptococcus dysgalactiae dysgalactiae
Streptococcus dysgalactiae equisimilis
Streptococcus elegans
Streptococcus entericus
Streptococcus equi
Streptococcus equi equi
Streptococcus equi zooepidemicus
Streptococcus equinus
Streptococcus faecalis
Streptococcus faecium
Streptococcus ferus
Streptococcus gallinarum
Streptococcus gallolyticus
Streptococcus gallolyticus gallolyticus
Streptococcus gallolyticus macedonicus
Streptococcus gallolyticus pasteurianus
Streptococcus garviae
Streptococcus gordonii
Streptococcus hansenii
Streptococcus hyovaginalis
Streptococcus infantarius
Streptococcus infantarius coli
Streptococcus infantarius infantarius
Streptococcus infantis
Streptococcus iniae
Streptococcus intermedius
Streptococcus intestinalis
Streptococcus lactis
Streptococcus lutetiensis
Streptococcus macacae
Streptococcus milleri group
Streptococcus mitis
Streptococcus mitis group
Streptococcus morbillorum
Streptococcus mutans
Streptococcus mutans group
Streptococcus oligofermentans
Streptococcus oralis
Streptococcus ovis
Streptococcus parasanguinis
Streptococcus parauberis
Streptococcus parvulus
Streptococcus pasteurianus
Streptococcus peroris
Streptococcus pluranimalium
Streptococcus pneumoniae
Streptococcus porcinus
Streptococcus productus
Streptococcus pseudopneumoniae
Streptococcus pseudoporcinus
Streptococcus pyogenes (group A streptococci)
Streptococcus ratti
Streptococcus saccharolyticus
Streptococcus salivarius
Streptococcus salivarius group
Streptococcus salivarius salivarius
Streptococcus salivarius thermophilus
Streptococcus sanguinis
Streptococcus sanguinis group
Streptococcus shiloi
Streptococcus sinensis
Streptococcus sobrinus
Streptococcus suis
Streptococcus thermophilus
Streptococcus tigurinus
Streptococcus uberis
Streptococcus vestibularis
Streptococcus, group C
Streptococcus, group D
Streptococcus, group F
Streptococcus, group G
Streptomyces
Streptomyces albus
Streptomyces bikiniensis
Streptomyces candidus
Streptomyces caviscabies
Streptomyces clavuligerus
Streptomyces erumpens
Streptomyces filamentosus
Streptomyces griseus
Streptomyces lincolnensis
Streptomyces roseosporus
Streptomyces setonii
Streptomyces somaliensis
Streptomyces spectabilis
Streptomyces thermovulgaris
Streptomyces venezuelae
Strongyloides
Succinivibrio
Succinivibrio dextrinosolvens
Sutterella
Sutterella wadsworthensis
Suttonella
Suttonella indologenes
Syncephalastrum
Syncephalastrum racemosum
Taenia
Talaromyces
Talaromyces marneffei
Talaromyces ruber
Tanapox virus
Tannerella
Tannerella forsythia
Tatlockia macaechernii
Tatlockia micdadei
Tatumella
Tatumella ptyseos
Tetragenococcus
Tetragenococcus halophilus
Tetragenococcus solitarius
Thermoactinomyces
Tick-borne encephalitis virus
Tissierella
Tissierella praeacuta
Togavirus
Torula dimidiata
Torula lipolytica
Torula utilis
Torulopsis aggregata
Torulopsis haemulonii
Torulopsis inconspicua
Torulopsis pintolopesii
Torulopsis utilis
Torulopsis utilis var utilis
Toxocara
Toxoplasma
Toxoplasma gondii
Trabulsiella
Trabulsiella guamensis
Treponema
Treponema carateum
Treponema pallidum
Trichinella
Trichoderma
Trichoderma viride
Trichomonas
Trichophyton
Trichosporon
Trichosporon asahii
Trichosporon beigelii
Trichosporon cutaneum
Trichosporon giganteum
Trichosporon inkin
Trichosporon loubieri
Trichosporon mucoides
Trichosporon mycotoxinivorans
Trichosporon ovoides
Trichosporon penicillatum
Trichosporon pullulans
Trichostrongylus
Trichothecium
Trichuris
Tropheryma
Tropheryma whipplei
Trueperella
Trueperella bernardiae
Trueperella pyogenes
Trypanosoma
Trypanosoma brucei
Trypanosoma brucei rhodesiense
Trypanosoma cruzi
Trypanosoma escomelis
Trypanosoma rangeli
Trypanosoma triatomae
Tsukamurella
Tsukamurella inchonensis
Tsukamurella paurometabola
Tsukamurella pulmonis
Tsukamurella strandjordii
Tsukamurella tyrosinosolvens
Turicella
Turicella otitidis
Turicibacter
Turicibacter sanguinis
Ulocladium
Ureaplasma
Ureaplasma parvum
Ureaplasma urealyticum
Ustilago
Vaccinia virus
Vagococcus
Vagococcus fluvialis
Vancomycin resistant Enterococcus
Vancomycin resistant Enterococcus faecalis
Vancomycin resistant Enterococcus faecium
Varicellavirus
Varicella-zoster virus
Varicellovirus
Variola virus
Veillonella
Veillonella alcalescens
Veillonella atypica
Veillonella caviae
Veillonella criceti
Veillonella dispar
Veillonella montpellierensis
Veillonella parvula
Veillonella ratti
Veillonella rodentium
Venezuelan equine encephalomyelitis virus
Verticillium
Vibrio
Vibrio alginolyticus
Vibrio carchariae
Vibrio cholerae
Vibrio cincinnatiensis
Vibrio damsela
Vibrio fetus
Vibrio fluvialis
Vibrio furnissii
Vibrio harveyi
Vibrio metschnikovii
Vibrio mimicus
Vibrio parahaemolyticus
Vibrio sputorum
Vibrio succinogenes
Vibrio trachuri
Vibrio vulnificus
Virgibacillus
Virgibacillus pantothenticus
Viridans group streptococci
Virus
Wangiella
Wangiella dermatitidis
Wautersia
Wautersia gilardii
Wautersia paucula
Wautersia respiaculi
Weeksella
Weeksella virosa
Weeksella zoohelcum
Weissella
Weissella confusa
West Nile virus
Western equine encephalomyelitis virus
Wolinella
Wolinella curva
Wolinella recta
Wolinella succinogenes
Xanthomonas
Xanthomonas maltophilia
Xenorhabdus
Xenorhabdus luminescens
Xenorhabdus nematophila
Xenotropic murine leukemia virus-related virus
Yeast
Yellow fever virus
Yersinia
Yersinia aldovae
Yersinia aleksiciae
Yersinia bercovieri
Yersinia enterocolitica
Yersinia frederiksenii
Yersinia intermedia
Yersinia kristensenii
Yersinia mollaretii
Yersinia pestis
Yersinia pseudotuberculosis
Yersinia rohdei
Yersinia ruckeri
Yokenella
Yokenella regensburgei
Zika virus
Zymobacterium oroticum
 HSN Organism List. DO NOT interpret the absence of an organism to mean the event is not reportable. If
ease contact us at nhsn@cdc.gov for guidance on appropriate reporting.

SNOMED Preferred Term SNOMED Code

Abiotrophia 115161005
Granulicatella adiacens 113713009
Granulicatella adiacens 113713009
Abiotrophia defectiva 113714003
Granulicatella elegans 115944008
Acanthamoeba 50875003
Acholeplasma 84858009
Acholeplasma laidlawii 89082003
Acholeplasma oculi 86450009
Achromobacter 91620006
Achromobacter denitrificans 413414001
Achromobacter piechaudii 413420000
Achromobacter ruhlandii 413421001
Achromobacter xylosoxidans 413424009
Achromobacter xylosoxidans xylosoxidans 423897003
Acidaminococcus 28207003
Acidaminococcus fermentans 63005002
Acid-fast bacillus 243365003
Acidovorax 115153000
Acidovorax delafieldii 113685003
Acidovorax facilis 113686002
Acidovorax temperans 113687006
Acinetobacter 7757008
Acinetobacter baumannii 91288006
Acinetobacter calcoaceticus 82550008
Acinetobacter calcoaceticus-Acinetobacter baumannii complex 113376007
Acinetobacter haemolyticus 77045006
Acinetobacter johnsonii 252000
Acinetobacter junii 13879009
Acinetobacter lwoffi 83088009
Acinetobacter nosocomialis 708859003
Acinetobacter pittii 698244000
Acinetobacter radioresistens 113381003
Acinetobacter schindleri 423732001
Acinetobacter ursingii 424791004
Pseudallescheria boydii 91088000
Scedosporium boydii 24305000
Acremonium 63996006
Acremonium alabamensis 83075006
Acremonium kiliense 243484001
Acremonium potroni 36128004
Acremonium potroni 36128004
Acremonium recifei 654006
Acremonium strictum 17720002
Rhinocladiella aquaspersa 45462000
Actinobacillus 85851009
Aggregatibacter actinomycetemcomitans 442680008
Actinobacillus equuli 27165004
Actinobacillus hominis 43638004
Actinobacillus lignieresii 78043002
Actinobacillus suis 112272003
Actinobacillus ureae 1839009
Actinomyces meyeri 3174002
Actinobaculum 114043007
Actinobaculum massiliense 416353004
Actinotignum schaalii 716526006
Actinotignum urinale 427148009
Actinomadura 41571004
Actinomadura latina 113402007
Actinomadura madurae 90285002
Actinomadura pelletieri 65202006
Actinomyces 40560008
Trueperella bernardiae 704975008
Actinomyces bovis 59806008
Actinomyces cardiffensis 427237005
Actinomyces dentalis 426330001
Actinomyces europaeus 113414004
Actinomyces funkei 419012004
Actinomyces georgiae 113415003
Actinomyces gerencseriae 113416002
Actinomyces graevenitzii 113417006
Actinomyces hongkongensis 427269001
Actinomyces israelii 46369004
Actinomyces meyeri 3174002
Actinomyces naeslundii 8940004
Actinomyces nasicola 425520001
Actinomyces neuii 87780299100008710
9
Actinomyces odontolyticus 12069003
Actinomyces oricola 425488009
Actinomyces oris 447175005
Trueperella pyogenes 258933002
Actinomyces radicidentis 427691003
Actinomyces radingae 113421004
Actinomyces turicensis 113422006
Actinomyces urogenitalis 409827009
Actinomyces viscosus 33529006
Actinotignum 716525005
Actinotignum schaalii 716526006
Actinotignum urinale 427148009
Aerobic bacteria 27471002
Aerococcus 9008009
Aerococcus christensenii 409818008
Aerococcus sanguinicola 427222006
Aerococcus urinae 243230001
Aerococcus urinaeequi 430979003
Aerococcus urinaehominis 409819000
Aerococcus viridans 78803006
Aeromonas 88529008
Aeromonas bestiarum 115027006
Aeromonas caviae 115036005
Aeromonas caviae complex 429561000124107
Aeromonas encheleia 115028001
Aeromonas trota 243316008
Aeromonas eucrenophilia 115030004
Aeromonas hydrophila 85823000
Aeromonas hydrophila complex 429581000124102
Aeromonas jandei 115034008
Aeromonas media 65192005
Aeromonas molluscorum 425862003
Aeromonas popoffii 115035009
Aeromonas caviae 115036005
Aeromonas salmonicida 30334005
Aeromonas schubertii 115039003
Aeromonas simiae 426333004
Aeromonas sobria 43731003
Aeromonas trota 243316008
Aeromonas veronii 9281006
Afipia 114234007
Afipia clevelandensis 114236009
Afipia felis 114237000
Aggregatibacter 441718002
Aggregatibacter actinomycetemcomitans 442680008
Aggregatibacter aphrophilus 442683005
Aggregatibacter segnis 442651004
Agrobacterium 33436009
Rhizobium radiobacter 438107000
Agromyces 427200004
Alcaligenes 68571003
Bordetella bronchiseptica 10620008
Alcaligenes faecalis 25223004
Alcaligenes faecalis 25223004
Achromobacter piechaudii 413420000
Achromobacter xylosoxidans 413424009
Alcaligenes xylosoxidans ss. xylosoxidans 53735001
Chrysosporium 55038006
Scedosporium apiospermum 26861000146102
Alishewanella 416056000
Alishewanella fetalis 417165004
Alistipes 427315001
Alistipes putredinis 426435007
Pseudallescheria boydii 91088000
Alloiococcus 396453006

Alloiococcus otitis 396454000

Genus Alloscardovia 429601004
Alloscardovia omnicolens 429317001
Alpha-hemolytic streptococcus 60631002
Alpha-hemolytic Streptococcus species not Streptococcus pneumoniae 713921004
Alternaria 75059003
Alternaria alternata 36703000
Alternaria dianthicola 28387003
Alternaria infectoria 21702003
Alternaria alternata 36703000
Alternaria tenuissima 35667002
Alysiella 55181006
Alysiella crassa 444924000
Amycolatopsis 115149002
Amycolatopsis orientalis 427705005
Anaerobe 59343002
Anaerobic Gram-negative bacillus 243386003
Anaerobic Gram negative coccobacillus 445380009
Anaerobic Gram-negative coccus 243397003
Anaerobic Gram-positive bacillus 243398008
Anaerobic Gram positive coccobacillus 445381008
Anaerobic Gram-positive coccus 243416009
Anaerobiospirillum 55757006
Anaerobiospirillum succinoproducens 46934005
Anaerobiospirillum thomasii 426729008
Anaerococcus 413518000
Anaerococcus hydrogenalis 413519008
Anaerococcus lactolyticus 413520002
Anaerococcus octavius 413521003
Anaerococcus prevotii 413522005
Anaerococcus tetradius 427220003
Anaerococcus vaginalis 413525007
Anaerorhabdus 54522000
Anaerorhabdus furcosus 24716009
Anaplasma 3351007
Ancylostoma 17113000
Aneurinibacillus 114125006
Aneurinibacillus aneurinilyticus 114126007
Angiostrongylus 7153002
Apophysomyces 68038008
Apophysomyces elegans 71235006
Aquabacterium 428044007
Aquabacterium parvum 429109001
Propionibacterium propionicum 427413007
Flavivirus 28375005
Arcanobacterium 51714009
Trueperella bernardiae 704975008
Arcanobacterium haemolyticum 44723000
Arcanobacterium pluranimalium 428939003
Trueperella pyogenes 258933002
Arcobacter 114206000
Arcobacter butzleri 114207009
Arcobacter nitrofigilis 408629003
Arenavirus 58234003
Arsenicicoccus 428986004
Arsenicicoccus bolidensis 428067009
Arthrobacter 56214009
Arthrobacter agilis 113432004
Arthrobacter albus 127496003
Arthrobacter arilaitensis 428949000
Arthrobacter astrocyaneus 113433009
Arthrobacter aurescens 113434003
Arthrobacter bergerei 428950000
Arthrobacter chlorophenolicus 428038008
Arthrobacter citreus 44955005
Arthrobacter creatinolyticus 417608004
Arthrobacter crystallopoietes 113435002
Arthrobacter cumminsii 113436001
Arthrobacter flavus 429762004
Arthrobacter gandavensis 428332000
Arthrobacter gangotriensis 429237000
Arthrobacter globiformis 3840003
Arthrobacter histidinolovorans 113437005
Arthrobacter ilicis 48276002
Arthrobacter kerguelensis 429238005
Arthrobacter koreensis 427847001
Arthrobacter luteolus 127497007
Arthrobacter methylotrophus 428270003
Arthrobacter mysorens 113438000
Arthrobacter nasiphocae 428337006
Arthrobacter nicotianae 113439008
Arthrobacter nicotinovorans 113440005
Arthrobacter nitroguajacolicus 429001000
Arthrobacter oryzae 446485009
Arthrobacter oxydans 113441009
Arthrobacter pascens 113442002
Arthrobacter polychromogenes 113443007
Arthrobacter protophormiae 62636004
Arthrobacter psychrolactophilus 428338001
Arthrobacter psychrophenolicus 428048005
Arthrobacter ramosus 113444001
Arthrobacter rhombi 428277000
Arthrobacter roseus 429003002
Arthrobacter russicus 428049002
Arthrobacter scleromae 704978005
Pseudomonas putida 68608003
Arthrobacter sulfonivorans 429111005
Arthrobacter sulfureus 33287009
Arthrobacter uratoxydans 112273008
Arthrobacter ureafaciens 113446004
Corynebacterium variabile 11575001
Arthrobacter viscosus 113447008
Arthrobacter woluwensis 113448003
Arthroderma 11860003
Arthrographis 112406004
Ascaris 66953006
Aspergillus 2429008
Aspergillus candidus 21477007
Aspergillus clavatus 87240002
Aspergillus deflectus 4204003
Aspergillus flavipes 54120001
Aspergillus flavus 66821001
Aspergillus fumigatus 32684000
Aspergillus glaucus 19556009
Aspergillus nidulans 60264008
Aspergillus niger 89354002
Aspergillus niveus 18651002
Aspergillus ochraceus 60111002
Aspergillus oryzae 35805009
Aspergillus parasiticus 57685002
Aspergillus restrictus 12871004
Aspergillus sydowii 46388006
Aspergillus terreus 26406003
Aspergillus ustus 23179008
Aspergillus versicolor 48315007
Aspergillus wentii 26030007
Astroviridae 424055004
Atopobium 115136007
Atopobium fossor 428580003
Atopobium minutum 113630002
Atopobium parvulum 113631003
Atopobium rimae 113632005
Atopobium vaginae 417246003
Aureimonas altamirensis 708495002
Aureimonas 708491006
Aureimonas altamirensis 708495002
Microbacterium liquefaciens 114063000
Aureobasidium 34121008
Aureobasidium pullulans 39129008
Genus Averyella 421099007
Azorhizobium 429633008
Azorhizobium caulinodans 428325009
Azospirillum 413607005
Azospirillum brasilense 413609008
Candida lipolytica 63775007
B19 virus 63603005
Babesia 35029001
Babesia microti 76828008
Bacillus 44762009
Bacillus aeolius 428272006
Bacillus aerius 446486005
Bacillus agaradhaerens 429112003
Brevibacillus agri 114115001
Bacillus alcalophilus 90547001
Bacillus algicola 428278005
Paenibacillus alvei 114088008
Bacillus amyloliquefaciens 82289003
Aneurinibacillus aneurinilyticus 114126007
Bacillus anthracis 21927003
Bacillus aquimaris 423188000
Bacillus arseniciselenatis 429004008
Bacillus asahii 429115001
Bacillus atrophaeus 113450006
Bacillus azotoformans 72997009
Bacillus badius 33457001
Bacillus barbaricus 429638004
Bacillus bataviensis 429246006
Bacillus benzoevorans 39232002
Bacillus boroniphilus 427831003
Brevibacillus brevis 114117009
Bacillus butanolivorans 447039005
Bacillus carboniphilus 113451005
Brevibacillus centrosporus 114118004
Bacillus cereus 84408007
Bacillus cereus group 413618005
Bacillus chittonlyticus 113452003
Bacillus circulans 71812004
Bacillus circulans group 413619002
Bacillus clarkii 113453008
Bacillus clausii 113454002
Bacillus coagulans 81346002
Bacillus cohnii 113455001
Bacillus decisifrondis 445081000
Bacillus decolorationis 429116000
Bacillus dipsosauri 113456000
Bacillus drentensis 428129008
Paenibacillus edaphicus 8501000146105
Bacillus ehimensis 113457009
Bacillus endophyticus 429137008
Bacillus farraginis 429348009
Bacillus fastidiosus 35784003
Bacillus firmus 13430008
Bacillus flexus 113458004
Bacillus fordii 417062004
Bacillus fortis 427859002
Bacillus fumarioli 429118004
Bacillus funiculus 428387004
Brevibacillus agri 114115001
Bacillus galactosidilyticus 427864003
Bacillus gelatini 429034003
Bacillus gibsonii 113460002
Bacillus ginsengi 445082007
Bacillus gornadae 29100001
Bacillus halmapalus 113462005
Bacillus halodenitrificans 113464006
Bacillus halodurans 113465007
Bacillus horikoshii 113467004
Bacillus horti 429138003
Bacillus humi 429139006
Bacillus hwajinpoensis 429035002
Bacillus idriensis 447040007
Bacillus indicus 429145003
Bacillus infantis 432698009
Bacillus infernus 113468009
Bacillus jeotgali 429127003
Bacillus kaustophilus 113469001
Bacillus korlensis 447041006
Bacillus krulwichiae 429126007
Sporolactobacillus laevolacticus 8331000146107
Paenibacillus larvae 114098002
Brevibacillus laterosporus 114121002
Paenibacillus lentimorbus 414989004
Bacillus lentus 3020006
Bacillus licheniformis 74867004
Bacillus luciferensis 429675009
Paenibacillus macerans 114101003
Bacillus macroides 413620008
Bacillus macyae 429206000
Bacillus marinus 87850009
Bacillus marisflavi 424425003
Bacillus massiliensis 445083002
Bacillus megaterium 79109002
Bacillus methanolicus 113471001
Bacillus mojavensis 113472008
Bacillus mucilaginosus 429210002
Bacillus muralis 428576008
Bacillus mycoides 33900003
Bacillus naganoensis 113473003
Bacillus nealsonii 428577004
Bacillus niacini 429747001
Bacillus novalis 429212005
Bacillus odysseyi 428958007
Bacillus okuhidensis 429468004
Bacillus oleronius 113487003
Paenibacillus pabuli 114103000
Bacillus pallidus 84897001
Virgibacillus pantothenticus 114109001
Brevibacillus parabrevis 114122009
Bacillus pasteurii 43131009
Bacillus patagoniensis 428962001
Bacillus pocheonensis 442283002
Paenibacillus polymyxa 114105007
Paenibacillus popilliae 414990008
Bacillus pseudalcaliphilus 113474009
Bacillus pseudofirmus 113475005
Bacillus pseudomycoides 429077002
Bacillus psychrophilus 1810009
Bacillus psychrosaccharolyticus 113476006
Bacillus pulvifaciens 112274002
Bacillus pumilus 16580009
Rummeliibacillus pycnus 450459009
Bacillus salexigens 113478007
Bacillus saliphilus 428588005
Bacillus selenitireducens 428966003
Bacillus shackletonii 429221006
Solibacillus silvestris 429471007
Bacillus simplex 113479004
Bacillus siralis 428972003
Bacillus smithii 84789000
Bacillus soli 428973008
Bacillus sonorensis 429472000
Bacillus sporothermodurans 113480001
Bacillus subterraneus 429486001
Bacillus subtilis 83512007
Bacillus subtilis group 413621007
Bacillus subtilis subspecies inaquosorum 447068006
Bacillus subtilis spizizenii 427760003
Bacillus subtilis subtilis 427764007
Bacillus tequilensis 447069003
Bacillus thermantarcticus 429760007
Bacillus thermoamylovorans 113481002
Bacillus thermocatenulatus 113482009
Bacillus thermocloacae 113483004
Geobacillus thermodenitrificans 433668006
Bacillus thermoglucosidasius 36302007
Paenibacillus thiaminolyticus 114106008
Bacillus thuringiensis 64840009
Bacillus tusciae 34498004
Paenibacillus validus 114107004
Bacillus vallismortis 113484005
Bacillus vedderi 113485006
Bacillus velezensis 429488000
Bacillus vietnamensis 429229008
Chromobacterium violaceum 11042002
Bacillus vireti 429230003
Bacillus weihenstephanensis 413622000
Bacillus species not Bacillus anthracis 413352001
Corynebacterium matruchotii 89922004
Bacteroides 57522007
Prevotella bivia 114131009
Prevotella buccae 114134001
Prevotella buccalis 114135000
Bacteroides caccae 14342006
Pseudoflavonifractor capillosus 447428000
Prevotella buccae 114134001
Clostridium clostridioforme 53220001
Bacteroides coagulans 86193002
Prevotella corporis 114136004
Prevotella denticola 114138003
Prevotella disiens 114139006
Parabacteroides distasonis 447512008
Bacteroides eggerthii 90072006
Porphyromonas endodontalis 2401005
Bacteroides fragilis 55247009
Bacteroides fragilis group 417375007
Anaerorhabdus furcosus 24716009
Porphyromonas gingivalis 114163003
Parabacteroides goldsteinii 5691000146107
Campylobacter gracilis 113528007
Prevotella heparinolytica 114141007
Megamonas hypermegale 9199006
Prevotella intermedia 114142000
Porphyromonas levii 114165005
Porphyromonas macacae 114166006
Bacteroides massiliensis 708567004
Prevotella melaninogenica 114144004
Parabacteroides merdae 447513003
Mitsuokella multacida 55553008
Dichelobacter nodosus 114168007
Bacteroides nordii 10091000087105
Capnocytophaga ochracea 4256006
Prevotella oralis 114146002
Prevotella oris 114147006
Prevotella oulorum 419466004
Bacteroides ovatus 86936008
Prevotella buccae 114134001
Tissierella praeacuta 75376009
Alistipes putredinis 426435007
Bacteroides pyogenes 50504006
Prevotella ruminicola 115949003
Porphyromonas macacae 114166006
Odoribacter splanchnicus 446487001
Bacteroides stercoris 163009
Bacteroides pyogenes 50504006
Bacteroides pyogenes 50504006
Bacteroides thetaiotaomicron 34236001
Bacteroides uniformis 59604009
Campylobacter ureolyticus 450602004
Prevotella veroralis 114152001
Bacteroides vulgatus 52798008
Bacteroides zoogleoformans 425729002
Balantidium 14479005
Balneatrix 416418007
Balneatrix alpica 416691007
Bartonella 62496009
Bartonella bacilliformis 243352007
Bartonella clarridgeiae 114223009
Bartonella elizabethae 103513003
Bartonella henselae 103510000
Bartonella quintana 103511001
Bartonella vinsonii 103512008
Basidiobolus 26217004
Basidiobolus ranarum 68673006
Basidiobolus ranarum 68673006
Basidiobolus ranarum 68673006
Basidiobolus ranarum 68673006
Beauveria 66193005
Beauveria bassiana 65562008
Vibrio alginolyticus 45749000
Vibrio harveyi 84003007
Vibrio parahaemolyticus 11736008
Vibrio vulnificus 55905000
Bergeyella 115659000
Bergeyella zoohelcum 113718000
Beta-hemolytic streptococcus 53490009
Beta-hemolytic Streptococcus, group A 413643004
Beta-hemolytic streptococcus, non-Group A, non-Group B 406609007
Bifidobacterium 5912005
Bifidobacterium adolescentis 34446001
Bifidobacterium angulatum 33811005
Bifidobacterium dentium 36623007
Bifidobacterium bifidum 27108000
Bifidobacterium breve 35011006
Bifidobacterium catenulatum 11539003
Bifidobacterium dentium 36623007
Bifidobacterium dentium 36623007
Bifidobacterium gallicum 51095003
Bifidobacterium infantis 35848003
Bifidobacterium longum 19464000
Bifidobacterium pseudocatenulatum 19333001
Bifidobacterium scardovii 385502004
Bifidobacterium longum 19464000
Bilophila 114242008
Bilophila wadsworthia 114243003
Bipolaris 24145000
Bipolaris australiensis 80923003
Bipolaris hawaiiense 31335001
Bipolaris hawaiiense 31335001
Bipolaris spicifera 88228004
BK virus 83397001
Blastoschizomyces 48211001
Blautia 448390002
Blautia coccoides 449531007
Blautia hansenii 449574005
Blautia producta 698205008
Bocavirus 430902006
Pediculus humanus 84936006
Bordetella 46466005
Bordetella avium 43354005
Bordetella bronchiseptica 10620008
Bordetella hinzii 113495004
Bordetella holmesii 116035000
Bordetella parapertussis 26183002
Bordetella pertussis 5247005
Bordetella petrii 416665006
Bordetella trematum 113496003
Borrelia 112277009
Borrelia afzelii 416551001
Borrelia anserina 58382007
Borrelia burgdorferi 76327009
Borrelia caucasica 12544007
Borrelia coriaceae 43459001
Borrelia crocidurae 35660000
Borrelia duttonii 39709002
Borrelia duttonii 39709002
Borrelia garinii 113497007
Borrelia hermsii 62748005
Borrelia hispanica 11787006
Borrelia japonica 113498002
Borrelia lusitaniae 113499005
Borrelia mazzottii 3293005
Borrelia miyamotoi 113500001
Borrelia recurrentis 34726005
Borrelia recurrentis 34726005
Borrelia parkeri 41704008
Borrelia recurrentis 34726005
Borrelia tanukii 113501002
Borrelia theileri 89068003
Borrelia turicatae 24986006
Borrelia valaisiana 113503004
Borrelia venezuelensis 30765003
Lasiodiplodia 78690001
Lasiodiplodia theobromae 784008
Brachybacterium 413689006
Brachybacterium muris 413695007
Bipolaris spicifera 88228004
Brachyspira 11572003
Brachyspira aalborgi 48621001
Brachyspira pilosicoli 113517008
Moraxella catarrhalis 24226003
Moraxella cuniculi 46450008
Moraxella ovis 112332009
Brevibacillus 114114002
Brevibacillus agri 114115001
Brevibacillus brevis 114117009
Brevibacillus centrosporus 114118004
Brevibacillus laterosporus 114121002
Brevibacillus parabrevis 114122009
Brevibacterium 3603008
Curtobacterium albidum 114182007
Corynebacterium ammoniagenes 113607008
Brevibacterium casei 6405003
Brevibacterium epidermidis 57301000
Microbacterium imperiale 114203008
Brevibacterium linens 112278004
Brevibacterium luteolum 409826000
Brevibacterium mcbrellneri 431099002
Microbacterium oxydans 414713001
Brevibacterium ravenspurgense 446348002
Brevibacterium sanguinis 431681006
Corynebacterium vitaeruminis 116390001
Brevundimonas 115154006
Brevundimonas diminuta 113689009
Brevundimonas vesicularis 113690000
Brucella 26250004
Brucella abortus 24224000
Brucella canis 38025008
Brucella melitensis 72829003
Brucella neotomae 28461002
Brucella ovis 35049005
Brucella suis 48317004
Budvicia 55851000
Budvicia aquatica 75464008
Bulleidia 413724008
Bulleidia extructa 413725009
Family Bunyaviridae 243615000
Burkholderia 414324002
Burkholderia ambifaria 416467009
Burkholderia anthina 417565005
Burkholderia arboris 445778000
Burkholderia cenocepacia 416941006
Burkholderia cepacia 113669008
Burkholderia cepacia complex 131281002
Burkholderia gladioli 113671008
Burkholderia contaminans 698061006
Burkholderia diffusa 700394003
Burkholderia dolosa 431173006
Paraburkholderia fungorum 417285005
Burkholderia gladioli 113671008
Burkholderia lata 442143003
Burkholderia latens 700393009
Burkholderia mallei 113674000
Burkholderia metallica 700392004
Burkholderia multivorans 113675004
Ralstonia pickettii 114053008
Burkholderia pseudomallei 116399000
Burkholderia pyrrocinia 113677007
Burkholderia stabilis 416616001
Burkholderia thailandensis 113678002
Burkholderia ubonensis 431686001
Burkholderia vietnamiensis 113680008
Buttiauxella 3451006
Buttiauxella agrestis 10969007
Buttiauxella brennerae 416844002
Buttiauxella ferragutiae 417520001
Buttiauxella gaviniae 416852004
Buttiauxella izardii 417035007
Buttiauxella noackiae 114261007
Buttiauxella warmboldiae 416444007
Eubacterium limosum 87632000
Butyricimonas 447185006
Butyricimonas virosa 447458006
Butyrivibrio 20778009
Butyrivibrio fibrisolvens 22176007
Butyrivibrio hungatei 431168000
Family Caliciviridae 243627002
California encephalitis virus 64979004
Calymmatobacterium 86702009
Klebsiella granulomatis 417443008
Campylobacter 35408001
Arcobacter butzleri 114207009
Helicobacter cinaedi 29258005
Campylobacter coli 40614002
Campylobacter concisus 9892000
Campylobacter curvus 116037008
Helicobacter fennelliae 58177005
Campylobacter fetus 84210007
Campylobacter fetus ss. fetus 64589009
Campylobacter jejuni 66543000
Campylobacter fetus ss. venerealis 60817000
Campylobacter gracilis 113528007
Campylobacter helveticus 113522008
Campylobacter hominis 416679003
Campylobacter hyointestinalis 9041007
Campylobacter insulaenigrae 432460004
Campylobacter jejuni 66543000
Campylobacter jejuni ss doylei 113523003
Campylobacter jejuni ss jejuni 113524009
Campylobacter lanienae 432537009
Campylobacter lari 116386003
Campylobacter lari 116386003
Campylobacter mucosalis 87402003
Helicobacter mustelae 10402009
Arcobacter nitrofigilis 408629003
Helicobacter pylori 80774000
Campylobacter rectus 113525005
Campylobacter showae 113526006
Campylobacter sputorum 91524009
Campylobacter sputorum ss. bubulus 19552006
Campylobacter mucosalis 87402003
Campylobacter sputorum ss. sputorum 58928003
Campylobacter upsaliensis 103427005
Campylobacter ureolyticus 450602004
Candida 3265006
Candida albicans 53326005
Candida stellatoidea 20849004
Candida auris 3491000146109
Candida bracarensis 3521000146107
Candida catenulata 283868009
Candida catenulata 283868009
Candida ciferrii 283867004
Candida dubliniensis 115952006
Candida duobushaemulonii 4001000146106
Cyberlindnera fabianii 10151000087104
Debaryomyces hansenii 243428001
Candida glabrata 444877006
Candida guilliermondii 16557001
Candida guilliermondii var membranaefaciens 283874009
Candida haemulonii 243452008
Candida inconspicua 283871001
Candida intermedia 243455005
Candida kefyr 446237006
Candida krusei 76995003
Candida lambica 116458007
Candida lipolytica 63775007
Candida lusitaniae 47608006
Candida metapsilosis 712760003
Candida nivariensis 3681000146109
Candida norvegensis 243458007
Candida lusitaniae 47608006
Candida orthopsilosis 3691000146106
Candida parapsilosis 61302002
Candida parapsilosis complex 717979000
Candida lusitaniae 47608006
Candida pararugosa 702328004
Candida pelliculosa 115953001
Candida pintolopesii 283870000
Candida pulcherrima 243459004
Candida catenulata 283868009
Candida rugosa 23773004
Candida sake 446283000
Candida pintolopesii 283870000
Candida stellatoidea 20849004
Candida stellimalicola 735367000
Candida tropicalis 47885008
Candida utilis 243464000
Candida vini 45362004
Candida viswanathii 243465004
Candida zeylanoides 243466003
Capnocytophaga 22294008
Capnocytophaga canimorsus 113529004
Capnocytophaga cynodegmi 113530009
Capnocytophaga gingivalis 66463009
Capnocytophaga granulosa 113531008
Capnocytophaga haemolytica 113532001
Capnocytophaga ochracea 4256006
Capnocytophaga sputigena 89892005
carbapenem resistant Acinetobacter 445721008
carbapenem resistant Enterobacter cloacae 714007005
carbapenem resistant Klebsiella pneumoniae 446870005
Cardiobacterium 22292007
Cardiobacterium hominis 7333005
Cardiobacterium valvarum 428148007
Catabacter 444347005
Catabacter hongkongensis 444515001
Catenibacterium 417391005
Catenibacterium mitsuokai 416305003
Catonella 363774008
Catonella morbi 363775009
Cedecea 69937007
Cedecea davisae 30854004
Cedecea lapagei 2345009
Cedecea neteri 83767006
Cellulomonas 114188006
Cellulosimicrobium cellulans 409862004
Cellulomonas hominis 114196001
Cellulomonas humilata 431580002
Cellulosimicrobium 409860007
Cellulosimicrobium cellulans 409862004
Centipeda 90699007
Centipeda periodontii 72002007
Acremonium 63996006
Acremonium kiliense 243484001
Acremonium potroni 36128004
Acremonium recifei 654006
Acremonium strictum 17720002
Chaetomium 10210008
Chaetomium atrobrunneum 415894007
Chaetomium globosum 38270005
Chikungunya virus 2423009
Chilomastix 72548008
Chilomastix mesnili 41340007
Chlamydia 16241000
Chlamydophila pneumoniae 103514009
Chlamydophila psittaci 14590003
Chlamydia trachomatis 63938009
Chlamydophila 372926008
Chlamydophila abortus 413820006
Chlamydophila pneumoniae 103514009
Chlamydophila psittaci 14590003
Chromobacterium 20064000
Chromobacterium violaceum 11042002
Chromobacterium violaceum 11042002
Chryseobacterium 115125000
Chryseobacterium gleum 113548000
Chryseobacterium indologenes 113549008
Chryseomonas 5274006
Chryseomonas luteola 33919008
Chryseomonas luteola 33919008
Chrysosporium 55038006
Citrobacter 75972000
Citrobacter amalonaticus 55744003
Citrobacter braakii 114262000
Citrobacter koseri 114264004
Citrobacter farmeri 114263005
Citrobacter freundii 6265002
Citrobacter gillenii 416990006
Citrobacter koseri 114264004
Citrobacter murliniae 417581000
Citrobacter rodentium 114444007
Citrobacter sedlakii 114265003
Citrobacter werkmanii 114442006
Citrobacter youngae 114443001
Cladophialophora 415897000
Cladophialophora bantiana 415898005
Cladosporium 32043002
Cladosporium cladosporioides 21121003
Cladosporium herbarum 3459008
Cladosporium sphaerospermum 19358006
Exophiala werneckii 83801002
Clavispora 28615005
Clavispora lusitaniae 50164000
Genus Clostridioides 772036006
Clostridioides difficile 5933001
Clostridium 8191000
Clostridium sardiniense 84958008
Clostridium argentiense 113565009
Clostridium baratii 31169007
Clostridium baratii 31169007
Eubacterium barkeri 113728009
Clostridium bartlettii 432470002
Clostridium beijerinckii 9766004
Clostridium bifermentans 8208007
Clostridium bolteae 413879005
Clostridium botulinum 13080008
Clostridium butyricum 19084008
Clostridium cadaveris 16616000
Clostridium carnis 7889007
Clostridium celerecrescens 113566005
Clostridium clostridioforme 53220001
Clostridium cochlearium 76955000
Clostridium cocleatum 24656001
Clostridioides difficile 5933001
Clostridium disporicum 57230009
Clostridium fallax 14264000
Clostridium ghonii 10467001
Clostridium ghonii 10467001
Clostridium glycolicum 112279007
Clostridium haemolyticum 45724004
Clostridium hastiforme 19185007
Clostridium hathewayi 416526002
Clostridium histolyticum 87443003
Clostridium indolis 50884003
Clostridium innocuum 19415008
Clostridium intestinale 113580003
Clostridium irregulare 40423006
Clostridium irregulare 40423006
Clostridium cochlearium 76955000
Clostridium leptum 37059005
Clostridium limosum 48305001
Clostridium malenominatum 12948002
Clostridium novyi 45891006
Flavonifractor plautii 447490001
Clostridium oroticum 29280008
Clostridium baratii 31169007
Clostridium paraputrificum 41966004
Clostridium baratii 31169007
Clostridium perfringens 8331005
Clostridium fallax 14264000
Clostridium butyricum 19084008
Clostridium putrefaciens 22321006
Clostridium ramosum 42706008
Clostridium sardiniense 84958008
Clostridium septicum 33101000
Clostridium sordellii 89313005
Clostridium sphenoides 65891000
Clostridium spiroforme 42936009
Clostridium sporogenes 41468005
Clostridium sporosphaeroides 89918009
Clostridium subterminale 58838009
Clostridium symbiosum 48321006
Clostridium tertium 81909005
Clostridium tetani 30917009
Filifactor villosus 114216008
Clostridium species, not Clostridium perfringens 413881007
Cokeromyces 22539001
Cokeromyces recurvatus 30049007
Coliform bacteria 77309002
Collinsella 417046005
Collinsella aerofaciens 417399007
Collinsella intestinalis 432267004
Collinsella stercoris 432759008
Colorado tick fever virus 34212000
Comamonas 413887006
Delftia acidovorans 20432002
Comamonas aquatica 413888001
Comamonas kerstersii 413892008
Comamonas terrigena 81829007
Comamonas testosteroni 43721005
Conidiobolus 42178002
Conidiobolus coronatus 15684003
Conidiobolus incongruus 55952006
Coniothyrium 416782000
Orf virus 64753004
Orf virus 64753004
Coprococcus 416549000
Coprococcus eutactus 416184008
Corynebacterium 77086004
Corynebacterium accolens 243254006
Corynebacterium afermentans 113608003
Corynebacterium afermentans ss afermentans 113609006
Corynebacterium afermentans ss lipophilum 113610001
Corynebacterium ammoniagenes 113607008
Corynebacterium amycolatum 113611002
Corynebacterium appendicis 423659000
Corynebacterium aquilae 424012003
Corynebacterium argentoratense 417499006
Corynebacterium atypicum 424209005
Corynebacterium aurimucosum 385503009
Corynebacterium auris 413925000
Corynebacterium auriscanis 424389005
Corynebacterium beticola 432270000
Corynebacterium bovis 44885001
Corynebacterium callunae 88866008
Corynebacterium camporealensis 424560007
Corynebacterium capitovis 424721008
Corynebacterium casei 424906005
Corynebacterium caspium 422791000
Corynebacterium ciconiae 424459004
Corynebacterium confusum 417134008
Corynebacterium coyleae 116461008
Corynebacterium cystitidis 50169005
Corynebacterium diphtheriae 5851001
Corynebacterium durum 413926004
Corynebacterium efficiens 423379003
Rhodococcus equi 80771008
Corynebacterium falsenii 116389005
Rhodococcus fascians 28901005
Corynebacterium felinum 423568009
Corynebacterium flavescens 47802009
Corynebacterium striatum 63815007
Corynebacterium freneyi 416914001
Corynebacterium genitalium 243260006
Corynebacterium glaucum 432808003
Corynebacterium glucuronolyticum 413927008
Corynebacterium glutamicum 89651003
Corynebacterium halotolerans 424529007
Arcanobacterium haemolyticum 44723000
Corynebacterium hoagii 54276004
Corynebacterium pseudodiphtheriticum 12050008
Corynebacterium imitans 413928003
Corynebacterium jeikeium 63410006
Corynebacterium kroppenstedtii 363777001
Corynebacterium kutscheri 88575000
Corynebacterium glutamicum 89651003
Corynebacterium lipophiloflavum 416863001
Corynebacterium macginleyi 363772007
Corynebacterium manihot 243261005
Corynebacterium massiliense 446285007
Corynebacterium mastitidis 424709009
Corynebacterium matruchotii 89922004
Corynebacterium mediolanum 243262003
Corynebacterium minutissimum 83594007
Corynebacterium variabile 11575001
Corynebacterium mucifaciens 413929006
Corynebacterium murisepticum 302583000
Corynebacterium kutscheri 88575000
Corynebacterium mycetoides 58879005
Corynebacterium nephridii 243263008
Corynebacterium aurimucosum 385503009
Corynebacterium pseudotuberculosis 55084001
Tsukamurella paurometabola 113510005
Corynebacterium phocae 116462001
Corynebacterium pilosum 81368007
Corynebacterium propinquum 113612009
Corynebacterium pseudodiphtheriticum 12050008
Corynebacterium pseudogenitalium 243264002
Corynebacterium pseudotuberculosis 55084001
Corynebacterium pseudotuberculostearicum 416570006
Trueperella pyogenes 258933002
Corynebacterium pyruviciproducens 450383002
Corynebacterium renale 62000003
Corynebacterium resistens 442804004
Corynebacterium riegelii 131241009
Corynebacterium rubrum 243265001
Corynebacterium glucuronolyticum 413927008
Corynebacterium simulans 416655000
Corynebacterium singulare 422898002
Corynebacterium sphenisci 422705004
Corynebacterium spheniscorum 432362008
Corynebacterium striatum 63815007
Corynebacterium suicordis 423784007
Corynebacterium sundsvallense 425307003
Corynebacterium tenuis 72243003
Corynebacterium terpenotabidum 422496009
Corynebacterium testudinoris 424212008
Corynebacterium thomssenii 416311000
Corynebacterium tuberculostearicum 416356007
Corynebacterium tuscaniense 450409000
Corynebacterium ulcerans 103428000
Corynebacterium urealyticum 113613004
Corynebacterium ureicelerivorans 429443001
Corynebacterium variabile 11575001
Corynebacterium variabile 11575001
Corynebacterium viscosum 243266000
Corynebacterium vitaeruminis 116390001
Corynebacterium vitaeruminis 116390001
Corynebacterium vitaeruminis 116390001
Corynebacterium xerosis 27101006
Corynebacterium species, not Corynebacterium diphtheriae 413931002
Corynebacterium species not Corynebacterium jeikeium 413930001
Toxigenic Corynebacterium 397426001
Coryneform bacteria 116442009
Coxiella 12220009
Coxiella burnetii 22533000
Creutzfeldt-Jakob agent 88520007
Crimean-Congo hemorrhagic fever virus 79875007
Cronobacter 444664004
Cronobacter dublinensis 445559002
Cronobacter malonaticus 445560007
Cronobacter muytjensii 445561006
Cronobacter sakazakii 445562004
Cronobacter turicensis 445639005
Cryptobacterium 416082009
Cryptobacterium curtum 417538003
Candida pararugosa 702328004
Candida utilis 243464000
Cryptosporidium 83821001
Cryptosporidium hominis 417722006
Cryptosporidium parvum 51504002
Cunninghamella 24861001
Cunninghamella bertholletiae 60182000
Cupriavidus 416121002
Cupriavidus basilensis 425009006
Cupriavidus gilardii 416329005
Cupriavidus metallidurans 423135006
Cupriavidus necator 432717007
Cupriavidus pauculus 429465001
Cupriavidus respiraculi 416495009
Curtobacterium 114181000
Curtobacterium albidum 114182007
Curvularia 5214001
Curvularia geniculata 22068007
Curvularia lunata 33165007
Bipolaris spicifera 88228004
Bipolaris spicifera 88228004
Cutibacterium 763051006
Cutibacterium acnes 39473003
Cyberlindnera fabianii 10151000087104
Cyclospora 103560006
Cyclospora cayetanensis 103561005
Cysticercus 78167007
Pedobacter heparinus 113554004
Ochroconis constricta 116451001
Ochroconis gallopava 116453003
Debaryomyces 243427006
Debaryomyces hansenii 243428001
Schwanniomyces polymorphus 717238009
Deinococcus 116424004
Delftia 416493002
Delftia acidovorans 20432002
Hepatitis D virus 83617006
Dengue virus 34348001
Dermabacter 413976002
Dermabacter hominis 413977006
Dermacoccus 115142006
Dermacoccus nishinomiyaensis 113776005
Dermatophilus 79048004
Dermatophilus congolensis 58141003
Dermatophilus congolensis 58141003
Desulfomonas 37456006
Desulfovibrio 243393004
Desulfovibrio desulfuricans 243394005
Desulfovibrio piger 431119000
Desulfovibrio vulgaris 431923009
Dialister 114169004
Dialister micraerophilus 446809007
Dialister pneumosintes 114170003
Diphyllobothrium 48262003
Dichelobacter 114167002
Dichelobacter nodosus 114168007
Dientamoeba 29334008
Dientamoeba fragilis 41542000
Dietzia 409831003
Dietzia cinnamea 443020004
Diphtheroids 54642001
Aerobic diphtheroids 44661006
Anaerobic diphtheroids 26481006
Diphyllobothrium 48262003
Dipylidium 21041005
Dolosicoccus 416690008
Dolosicoccus paucivorans 416464002
Dolosigranulum 363764005
Dolosigranulum pigrum 363765006
Dorea 432232004
Dorea formicigenerans 433913005
Dorea longicatena 433914004
Drechslera 73185003
Bipolaris australiensis 80923003
Exserohilum rostratum 76951009
Bipolaris hawaiiense 31335001
Exserohilum rostratum 76951009
Bipolaris spicifera 88228004
Dyella 713873002
Dysgonomonas 409809006
Dysgonomonas capnocytophagoides 409811002
Dysgonomonas gadei 409812009
Eastern equine encephalitis virus 243601002
Ebolavirus 424206003
Echinococcus 47622006
Measles virus 52584002
Edwardsiella 14566004
Edwardsiella tarda 74672006
Edwardsiella hoshinae 4280005
Edwardsiella ictaluri 68227003
Edwardsiella tarda 74672006
Ascaris 66953006
Eggerthella 414075007
Eggerthella lenta 414077004
Eggerthella sinesis 414078009
Eggerthia 7991000146108
Eggerthia catenaformis 59836004
Ehrlichia 27334000
Eikenella 4346009
Eikenella corrodens 52591004
Elizabethkingia 426244005
Elizabethkingia meningoseptica 425774009
Chrysosporium 55038006
Empedobacter 115126004
Empedobacter brevis 113629007
Endolimax 75866001
Endolimax nana 53272006
Entamoeba 38324000
Entamoeba coli 79235009
Entamoeba dispar 415987008
Entamoeba gingivalis 44457009
Entamoeba hartmanni 70632005
Entamoeba histolytica 4716008
Entamoeba histolytica/Entamoeba dispar complex 363769000
Entamoeba polecki 66223005
Enterobacter 58683007
Klebsiella aerogenes 62592009
Pantoea agglomerans 115015008
Pantoea agglomerans 115015008
Enterobacter amnigenus 84221003
Enterobacter asburiae 33115003
Enterobacter cancerogenus 114451003
Enterobacter cloacae 14385002
Enterobacter cloacae complex 414102007
Enterobacter cloacae subspecies dissolvens 56813009
Kosakonia cowanii 416229008
Enterobacter cloacae subspecies dissolvens 56813009
Pluralibacter gergoviae 716346000
Hafnia alvei 76694001
Enterobacter hormaechei 114454006
Kluyvera intermedia 431977008
Enterobacter kobei 114456008
Serratia liquefaciens 23787004
Enterobacter ludwigii 432763001
Lelliottia nimipressuralis 29511003
Pluralibacter pyrinus 114455007
Enterobacteriaceae 106544002
Enterobius 88569009
Genus Enterococcus 2785000
Enterococcus asini 425342004
Enterococcus avium 87875008
Enterococcus canis 424191009
Enterococcus casseliflavus 30949009
Enterococcus cecorum 113722005
Enterococcus dispar 113724006
Enterococcus durans 46464008
Enterococcus faecalis 78065002
Enterococcus faecium 90272000
Enterococcus casseliflavus 30949009
Enterococcus gallinarum 53233007
Enterococcus gilvus 416934000
Enterococcus haemoperoxidus 423614008
Enterococcus hermanniensis 422482003
Enterococcus hirae 73852008
Enterococcus italicus 422707007
Enterococcus malodoratus 10262005
Enterococcus moraviensis 424862009
Enterococcus mundtii 38004008
Enterococcus pallens 417099004
Enterococcus phoeniculicola 432791009
Enterococcus pseudoavium 103436009
Enterococcus raffinosus 103437000
Enterococcus ratti 431989005
Enterococcus saccharolyticus 103438005
Enterococcus italicus 422707007
Lactococcus garvieae 27716002
Tetragenococcus solitarius 431990001
Enterococcus sulfureus 113726008
Enterococcus villorum 424710004
Enterocytozoon 20581002
EHEC, serotype O157:H7 103429008
Enteromonas 58815006
Enteromonas hominis 78006004
Enteropathogenic Escherichia coli 83285000
Genus Enterovirus 243633006
hepatitis A virus 32452004
Conidiobolus 42178002
Conidiobolus coronatus 15684003
Epicoccum 7633000
Epidermophyton 112403007
Human herpesvirus 4 40168006
Erwinia 38865008
Pantoea ananatis 115014007
Enterobacter cancerogenus 114451003
Enterobacter cloacae subspecies dissolvens 56813009
Pantoea agglomerans 115015008
Lelliottia nimipressuralis 29511003
Erwinia persicina 431272005
Pantoea ananatis 115014007
Erysipelothrix 88266001
Erysipelothrix inopinata 431389000
Erysipelothrix rhusiopathiae 48666005
Erysipelothrix rhusiopathiae 48666005
Erysipelothrix tonsillarum 12575003
Escherichia 64735005
Leclercia adecarboxylata 57459006
Escherichia albertii 419388003
Escherichia coli 112283007
Escherichia fergusonii 72461005
Escherichia hermannii 85786000
Escherichia vulneris 53013003
Eubacterium 5615005
Collinsella aerofaciens 417399007
Pseudoramibacter alactolyticus 113828002
Eubacterium barkeri 113728009
Eubacterium biforme 20347007
Eubacterium brachy 12734008
Eubacterium budayi 29984006
Eubacterium budayi 29984006
Eubacterium callanderi 113730006
Eubacterium combesii 13257008
Eubacterium contortum 59949005
Eubacterium cylindroides 20804002
Eubacterium dolichum 82964000
Eubacterium eligens 66412009
Slackia exigua 434236002
Atopobium fossor 428580003
Eubacterium hadrum 4696003
Eubacterium hallii 58040000
Eubacterium infirmum 113733008
Eggerthella lenta 414077004
Eubacterium limosum 87632000
Eubacterium minutum 113734002
Eubacterium moniliforme 46192006
Eubacterium nitrogenes 22777005
Eubacterium nodatum 48215005
Flavonifractor plautii 447490001
Eubacterium ramulus 8315002
Eubacterium rectale 69189003
Eubacterium saburreum 41543005
Eubacterium saphenum 113735001
Eubacterium siraeum 70459007
Eubacterium sulci 432171006
Eubacterium tenue 29575000
Mogibacterium timidum 417280000
Eubacterium ventriosum 20578007
Eubacterium yurii 4791002
Ewingella 3878001
Ewingella americana 19027003
Exiguobacterium 114178005
Exiguobacterium acetylicum 114179002
Exophiala 12210004
Exophiala bergeri 415908000
Wangiella dermatitidis 20586007
Exophiala jeanselmei 38224003
Exophiala spinifera 66283007
Exophiala werneckii 83801002
Exserohilum 78813003
Exserohilum rostratum 76951009
ESBL Citrobacter freundii 721909006

ESBL Enterobacter cloacae 721910001

ESBL Escherichia coli 409800005

Extended spectrum beta-lactamase producing Klebsiella oxytoca 713928005
ESBL Klebsiella pneumoniae 409801009

ESBL Proteus mirabilis 713929002

ESBL Shigella sonnei 721911002
Facklamia 414180001
Facklamia hominis 414181002
Facklamia ignava 417537008
Facklamia languida 416607000
Facklamia sourekii 416870001
Facklamia tabacinasalis 432914009
Faecalibacterium 432915005
Faecalibacterium prausnitzii 433993006
Mobiluncus mulieris 13716002
Mobiluncus curtisii 30224004
Genus Filifactor 115663007
Filifactor alocis 431367004
Filifactor villosus 114216008
Finegoldia 417248002
Finegoldia magna 417469002
Sarcinosporon inkin 243547001
Pseudomonas oryzihabitans 113931000
Flavivirus 28375005
Flavobacterium 18986002
Microbacterium arborescens 414699006
Chryseobacterium indologenes 113549008
Empedobacter brevis 113629007
Flavobacterium devorans 14795006
Chryseobacterium gleum 113548000
Pedobacter heparinus 113554004
Chryseobacterium indologenes 113549008
Microbacterium maritypicum 414710003
Microbacterium maritypicum 414710003
Elizabethkingia meningoseptica 425774009
Flavobacterium mitzutaii 113749005
Sphingobacterium multivorum 51595006
Myroides odoratus 113558001
Sphingomonas paucimobilis 243350004
Sphingobacterium spiritivorum 61675006
Sphingobacterium thalpophilum 113954009
Sphingobacterium spiritivorum 61675006
Flavonifractor 447035004
Flavonifractor plautii 447490001
Fluoribacter 115165001
Legionella bozemanae 450611004
Legionella dumoffii 113720002
Legionella gormanii 113721003
Fonsecaea 23639003
Fonsecaea compacta 76124007
Fonsecaea compacta 76124007
Wangiella dermatitidis 20586007
Fonsecaea pedrosoi 69356007
Francisella 50255000
Francisella tularensis 51526001
Fungi 414561005
Fusarium 35238009
Fusarium chlamydosporum 79265004
Fusarium culmorum 15773001
Fusarium dimerum 62624005
Fusarium graminearum 11090009
Fusarium solani 46351008
Fusarium proliferatum 243549003
Fusarium oxysporum 38836002
Fusarium poae 36116007
Fusarium proliferatum 243549003
Fusarium graminearum 11090009
Fusarium semitectum 29238009
Fusarium solani 46351008
Fusarium sporotrichioides 7626000
Fusarium tricintum 75448000
Fusarium tricintum 75448000
Fusarium verticillioides 57877009
Neoscytalidium dimidiatum 715363007
Fusobacterium 33562003
Filifactor alocis 431367004
Fusobacterium canifelinum 432342000
Fusobacterium equinum 432343005
Fusobacterium gonidiaformans 84644009
Fusobacterium mortiferum 112330001
Fusobacterium naviforme 33311002
Fusobacterium necrogenes 17304009
Fusobacterium necrophorum 27274008
Fusobacterium necrophorum ss fundiliforme 113757008
Fusobacterium necrophorum ss necrophorum 113758003
Fusobacterium nucleatum 32763000
Fusobacterium nucleatum ss fusiforme 113760001
Fusobacterium nucleatum ss nucleatum 113761002
Fusobacterium nucleatum ss polymorphum 113762009
Fusobacterium periodonticum 69601004
Flavonifractor plautii 447490001
Fusobacterium nucleatum ss polymorphum 113762009
Faecalibacterium prausnitzii 433993006
Fusobacterium russii 85226004
Eubacterium sulci 432171006
Fusobacterium ulcerans 113764005
Fusobacterium varium 1972005
Gallicola 432277002
Gallicola barnesae 433725004
gamma-hemolytic streptococcus 22339002
Gardnerella 69256005
Gardnerella vaginalis 64071004
Gemella 11590002
Gemella bergeriae 131310006
Gemella haemolysans 37511002
Gemella morbillorum 113765006
Gemella sanguinis 125038007
Geobacillus 432566007
Geobacillus stearothermophilus 433616004
Geobacillus thermodenitrificans 433668006
Geobacillus thermoglucosidasius 434278008
Geotrichum 34324005
Geotrichum candidum 41625002
Geotrichum klebahnii 446493009
Geotrichum klebahnii 446493009
Rubella virus 5210005
Giardia 61419001
Giardia lamblia 78181009
Giardia lamblia 78181009
Giardia lamblia 78181009
Chrysosporium 55038006
Gliocladium 28920007
Globicatella 414344008
Globicatella sanguinis 414345009
Globicatella sulfidifaciens 414347001
Gordonia 115143001
Gordonia bronchialis 113646005
Gordonia otitidis 443659007
Gordonia polyisoprenivorans 420096009
Gordonia rubripertincta 113647001
Gordonia rubripertincta 113647001
Gordonia sputi 113648006
Gordonia terrae 113649003
Gram-negative bacillus 87172008
Fermentative Gram-negative bacillus 243312005
Non-fermentative Gram-negative bacillus 243328000
Gram-negative coccobacillus 53932007
Gram-negative coccus 18383003
Gram-negative diplococcus 83410001
Gram-negative pleomorphic bacillus 73460001
Gram-positive bacillus 83514008
Gram positive coccobacillus 49682003
Gram-positive coccus 59206002
Gram-positive diplococcus 11471007
Gram-variable bacillus 243288000
Gram-variable coccobacillus 301782009
Gram-variable coccus 301781002
Granulicatella 409814005
Granulicatella adiacens 113713009
Granulicatella elegans 115944008
Graphium 21755009
Grimontia 431444000
Grimontia hollisae 433669003
Haemophilus 71268004
Aggregatibacter actinomycetemcomitans 442680008
Haemophilus aegyptius 27784005
Aggregatibacter aphrophilus 442683005
Haemophilus haemoglobinophilus 72339004
Haemophilus ducreyi 64889004
Haemophilus haemoglobinophilus 72339004
Haemophilus haemolyticus 54950008
Haemophilus influenzae 44470000
Haemophilus parahaemolyticus 89800007
Haemophilus parainfluenzae 51593004
Haemophilus pittmaniae 432919004
Aggregatibacter segnis 442651004
Hafnia 20523001
Hafnia alvei 76694001
Halomonas 114046004
Halomonas venusta 417325005
Pichia angusta 449402006
Pichia anomala 427041001
Cyberlindnera fabianii 10151000087104
Ogataea polymorpha 707830000
Hartmannella 112412009
Helcococcus 127526006
Helcococcus kunzii 127527002
Helcococcus sueciensis 431369001
Helicobacter 19454009
Helicobacter acinonychis 60081005
Helicobacter acinonychis 60081005
Helicobacter aurati 431287000
Helicobacter bilis 113537007
Helicobacter bizzozeroni 113538002
Helicobacter canadensis 416087003
Helicobacter canis 113539005
Helicobacter cholecystus 113540007
Helicobacter cinaedi 29258005
Helicobacter felis 68625001
Helicobacter fennelliae 58177005
Helicobacter ganmani 431448002
Helicobacter hepaticus 113541006
Helicobacter mesocricetorum 431449005
Helicobacter muridarum 78504006
Helicobacter mustelae 10402009
Helicobacter pylori 80774000
Helicobacter pametensis 432972000
Helicobacter pullorum 113543009
Helicobacter pylori 80774000
Helicobacter rappini 49037001
Helicobacter rodentium 113544003
Helicobacter salomonis 113545002
Helicobacter trogontum 113546001
Helicobacter typhlonius 432973005
Helminthosporium 14877004
Bipolaris australiensis 80923003
Exserohilum rostratum 76951009
Bipolaris hawaiiense 31335001
Exserohilum rostratum 76951009
Bipolaris spicifera 88228004
Bordetella pertussis 5247005
hepatitis A virus 32452004
hepatitis B virus 81665004
hepatitis C virus 62944002
Hepatitis D virus 83617006
Hepatitis E virus 78475006
Hepatitis G virus 397582004
Herbaspirillum 116406001
Family Herpesviridae 128377001
Human herpes simplex virus 19965007
Heterophyes 13029007
Heterophyes heterophyes 15310008
Holdemania 416161001
Holdemania filiformis 417221003
Wangiella dermatitidis 20586007
Cladosporium 32043002
Wangiella dermatitidis 20586007
Hormonema 116445006
Hormonema dermatoides 116471005
Exophiala werneckii 83801002
Human cytomegalovirus 5 243579005
Human adenovirus 74871001
Human coronavirus 84101006
Human coxsackievirus 57757007
Human coxsackievirus A 53744000
Human coxsackievirus B 49018005
Human cytomegalovirus 5 243579005
Human echovirus 39164004
Human herpes simplex virus 19965007
Human herpes simplex virus type 1 15302007
Human herpes simplex virus type 2 13687007
Human herpesvirus 3 19551004
Human herpesvirus 4 40168006
human herpesvirus 6 103528003
human herpesvirus 8 427605002
Human immunodeficiency virus type 2 36115006
Human immunodeficiency virus type I 89293008
Human metapneumovirus 416730002
Human papillomavirus 9482002
human parainfluenza viruses 407498006
human poliovirus 44172002
Human respiratory syncytial virus 6415009
Human rhinovirus 1838001
Human T-lymphotropic virus 1 77457007
Human T-lymphotropic virus 2 30417003
Taenia 28625000
Hymenolepis 76403008
Ignavigranum 432322009
Ignavigranum ruoffiae 434190004
Influenza A virus 407479009
Influenza A virus subtype H1N1 442352004
Influenza B virus 407480007
Influenza C virus 407482004
Influenza virus 725894000
Inquilinus 428734002
Inquilinus limosus 427977006
Isospora 26704001
Janibacter 409828004
Janibacter hoylei 698246003
JC virus 36319009
Jonesia 115138008
Jonesia denitrificans 113769000
Kerstersia 417655009
Kerstersia gyiorum 417628000
Kingella 32017003
Kingella denitrificans 78676004
Suttonella indologenes 116392009
Kingella kingae 90422000
Kingella oralis 129080004
Kingella potus 423288009
Klebsiella 75032006
Klebsiella aerogenes 62592009
Klebsiella granulomatis 417443008
Raoultella ornithinolytica 416832000
Klebsiella oxytoca 40886007
Klebsiella pneumoniae ss. ozaenae 65186004
Raoultella planticola 416264004
Klebsiella pneumoniae 56415008
Klebsiella pneumoniae ss. ozaenae 65186004
Klebsiella pneumoniae ss. pneumoniae 18400002
Klebsiella pneumoniae ss. rhinoscleromatis 17688001
Klebsiella pneumoniae ss. rhinoscleromatis 17688001
Klebsiella singaporensis 433047006
Raoultella terrigena 416096003
Raoultella planticola 416264004
Klebsiella variicola 431976004
Kloeckera 415932007
Kluyvera 61161003
Kluyvera ascorbata 58493008
Kluyvera cryocrescens 32547006
Kluyvera georgiana 416156003
Kluyvera intermedia 431977008
Kluyveromyces 78377004
Kluyveromyces marxianus 243431000
Kluyveromyces lactis 243430004
Kluyveromyces marxianus 243431000
Kocuria 414328004
Kocuria rosea 113773002
Kocuria kristinae 113772007
Kocuria rosea 113773002
Kocuria varians 113774008
Kodamaea 447042004
Kodamaea ohmeri 447491002
Kosakonia 8031000146105
Kosakonia cowanii 416229008
Yokenella regensburgei 89477001
Kroppenstedtia 699369007
Kroppenstedtia eburnea 699374004
Kurthia 69512006
Kurthia bessoni 243283009
Kytococcus 115141004
Kytococcus sedentarius 113775009
Lachancea 4661000146103
Lachancea fermentati 4981000146101
Genus Lachnoanaerobaculum 705168000
Lachnoanaerobaculum orale 705171008
Lactobacillus 43690008
Lactobacillus acidophilus 45707005
Lactobacillus amylovorus 9534006
Lactobacillus antri 431689008
Lactobacillus plantarum 14332009
Lactobacillus brevis 90396007
Lactobacillus buchneri 49217007
Lactobacillus casei 1017006
Eggerthia catenaformis 59836004
Lactobacillus fermentum 65506008
Weissella confusa 113639001
Lactobacillus crispatus 89237007
Lactobacillus delbrueckii 5197002
Lactobacillus fermentum 65506008
Lactobacillus gasseri 71158000
Lactobacillus gastricus 431787001
Lactobacillus iners 431967006
Lactobacillus jensenii 65904004
Lactobacillus johnsonii 113786006
Lactobacillus kalixensis 432574008
Atopobium minutum 113630002
Lactobacillus oris 87480009
Lactobacillus paracasei 113792000
Lactobacillus plantarum 14332009
Lactobacillus reuteri 86271002
Lactobacillus rhamnosus 113798001
Atopobium rimae 113632005
Lactobacillus sakei 39861009
Lactobacillus salivarius 37809002
Lactobacillus ultunensis 432284005
Lactobacillus vaginalis 113803005
Lactobacillus vitulinus 10276006
Lactococcus 9879003
Lactococcus garvieae 27716002
Lactococcus lactis 62079003
Lasiodiplodia 78690001
Lasiodiplodia theobromae 784008
Lassa virus 85944001
Leclercia 43590002
Leclercia adecarboxylata 57459006
Lecythophora 17712004
Lecythophora hoffmannii 55153000
Lecythophora mutabilis 38749003
Legionella 7527002
Legionella adelaidensis 103447002
Legionella anisa 18214000
Legionella beliardensis 432714000
Legionella birminghamensis 22592008
Legionella bozemanae 450611004
Legionella brunensis 103448007
Legionella busanensis 433050009
Legionella cherrii 52462004
Legionella cincinnatiensis 58923007
Legionella drancourtii 432325006
Legionella drozanskii 432712001
Legionella dumoffii 113720002
Legionella erythra 28109006
Legionella fairfieldensis 103449004
Legionella fallonii 432453005
Legionella feeleii 17083009
Legionella geestiana 103450004
Legionella gormanii 113721003
Legionella hackeliae 58939000
Legionella israelensis 3128001
Legionella janestowniensis 89709001
Legionella jordanis 39739007
Legionella lansingensis 103452007
Legionella londiniensis 103453002
Legionella longbeachae 89605004
Legionella lytica 113806002
Legionella maceachernii 116379006
Legionella micdadei 116380009
Legionella moravica 103454008
Legionella nautarum 103455009
Legionella oakridgensis 638008
Legionella parisiensis 38322001
Legionella micdadei 116380009
Legionella pneumophila 80897008
Legionella quateirensis 113807006
Legionella quinlivanii 103459003
Legionella rowbothamii 432713006
Legionella rubrilucens 17298000
Legionella sainthelens 87271006
Legionella santicrucis 72814000
Legionella shakespearei 103460008
Legionella spiritensis 64930007
Legionella steigerwaltii 14121003
Legionella taurinensis 433048001
Legionella tucsonensis 103461007
Legionella wadsworthii 8147000
Legionella waltersii 113808001
Legionella worsleiensis 103462000
Leifsonia 414590004
Leifsonia aquatica 414591000
Leifsonia xyli 414596005
Leishmania 79357004
Lelliottia 717652001
Enterobacter amnigenus 84221003
Lelliottia nimipressuralis 29511003
Leminorella 31556000
Leminorella grimontii 74357002
Leminorella richardii 45354007
Leptosphaeria 42797005
Leptosphaeria senegalensis 48529007
Leptosphaeria tompkinsii 80279006
Leptospira 26764003
Leptospira interrogans 116401006
Leptotrichia 52505003
Eubacterium saburreum 41543005
Leptotrichia buccalis 85744006
Leptotrichia goodfellowii 433192002
Leptotrichia trevisanii 431794003
Leptotrichia wadei 433194001
Leuconostoc 43639007
Leuconostoc citreum 113821008
Leuconostoc citreum 113821008
Leuconostoc lactis 70285009
Leuconostoc mesenteroides 71403009
Leuconostoc pseudomesenteroides 243235006
Citrobacter amalonaticus 55744003
Citrobacter koseri 114264004
Listeria 23566007
Jonesia denitrificans 113769000
Listeria grayi 67816007
Listeria innocua 48331004
Listeria ivanovii 55032007
Listeria monocytogenes 36094007
Listeria seeligeri 43091008
Listeria welshimeri 80757000
Listonella 115043004
Loboa 90959007
Lodderomyces 448291001
Lodderomyces elongisporus 449485005
Vibrio harveyi 84003007
Lymphocytic choriomeningitis virus 82518003
Macrococcus 414633005
Macrococcus bovicus 414634004
Macrococcus carouselicus 414636002
Macrococcus caseolyticus 416613009
Macrococcus equipercicus 414637006
Alternaria 75059003
Madurella 23009007
Madurella grisea 82871006
Madurella mycetomatis 24876009
Madurella mycetomatis 24876009
Malassezia 18097004
Malassezia furfur 29619007
Malassezia globosa 707291006
Malassezia furfur 29619007
Malassezia pachydermatis 51257000
Malassezia restricta 10171000087105
Malassezia sympodialis 447178007
Malbranchea 87186007
Mannheimia 128381001
Mannheimia haemolytica 128385005
Marburgvirus 424421007
Massilia 409856009
Massilia timonae 409858005
Mastadenovirus 38350001
Measles virus 52584002
Megamonas 44152007
Megamonas hypermegale 9199006
Megamonas hypermegale 9199006
Megasphaera 48889004
Megasphaera elsdenii 26044001
Metarhizium 116443004
Metarhizium anisopliae 116446007
methicillin resistant Staphylococcus aureus 115329001
Methylobacterium 38395008
Methylobacterium mesophilicum 103486003
Methylobacterium zatmanii 103491002
Meyerozyma 718505003
Meyerozyma guilliermondii 29812000
Microbacterium 114199008
Microbacterium arborescens 414699006
Microbacterium hydrocarbonoxydans 414707005
Microbacterium imperiale 114203008
Microbacterium lacticum 114204002
Microbacterium liquefaciens 114063000
Microbacterium maritypicum 414710003
Microbacterium oxydans 414713001
Microbacterium paraoxydans 414714007
Microbacterium resistens 414716009
Micrococcus 52864008
Micrococcus antarcticus 416555005
Micrococcus luteus 48299003
Nesterenkonia halobia 113770004
Kocuria kristinae 113772007
Micrococcus luteus 48299003
Micrococcus lylae 61376003
Micrococcus luteus 48299003
Peptococcus niger 112344007
Micrococcus nishinomiyaensis 67084000
Kocuria rosea 113773002
Kytococcus sedentarius 113775009
Micromonospora 416958001
Micromonospora chalcea 430840008
Nocardia brevicatena 70366009
Microsporidium 243662007
Microsporum 11983001
Sarcinosporon inkin 243547001
Mitsuokella 24231001
Prevotella dentalis 114137008
Mitsuokella multacida 55553008
Mobiluncus 8984004
Mobiluncus curtisii 30224004
Mobiluncus mulieris 13716002
Moellerella 71655003
Moellerella wisconsensis 37107002
Mogibacterium 416887004
Mogibacterium diversum 429898003
Mogibacterium neglectum 429899006
Mogibacterium timidum 417280000
Mogibacterium vescum 416225002
Mold 84489001
Molluscum contagiosum virus 68855006
Monkeypox virus 59774002
Scedosporium apiospermum 26861000146102
Moraxella 36361003
Riemerella anatipestifer 113658005
Moraxella atlantae 47491001
Moraxella boevrei 113832008
Moraxella bovis 19425003
Moraxella canis 113833003
Moraxella caprae 113834009
Moraxella catarrhalis 24226003
Moraxella cuniculi 46450008
Kingella kingae 90422000
Kingella kingae 90422000
Moraxella lacunata 84066001
Moraxella lincolnii 113836006
Moraxella lacunata 84066001
Moraxella nonliquefaciens 46455003
Moraxella oblonga 430486003
Moraxella osloensis 72401008
Moraxella ovis 112332009
Psychrobacter phenylpyruvicus 113941002
Oligella urethralis 90341001
Genus Morbillivirus 83313003
Morganella 50713005
Morganella morganii 243301005
Morganella morganii subsp sibonii 243303008
Mortierella 61016004
Mortierella wolfii 63197001
Mucor 49782006
Mucor circinelloides 67625003
Mucor hiemalis 243423005
Mucor circinelloides 67625003
Mucor circinelloides 67625003
Rhizomucor pusillus 70399006
Mucor racemosus 29589005
Mucor ramosissimus 79297004
Mucor rouxianus 243425003
multidrug resistant Achromobacter xylosoxidans 707330008
multidrug resistant Acinetobacter 446157004
multidrug resistant Enterobacter asburiae 714316001
multidrug resistant Klebsiella pneumoniae 714315002
multidrug resistant Morganella morganii 707293009
multidrug resistant Pseudomonas aeruginosa 710332005
multiple drug-resistant Enterobacter cloacae 714317005
multiple drug-resistant Proteus mirabilis 714314003
Mumps virus 50384007
Mycelia sterilia 243555008
Mycobacterium 243368001
Mycobacterium abscessus 113838007
Mycobacterium africanum 51320008
Mycobacterium agri 29111009
Mycobacterium aichiense 66940008
Mycobacterium alvei 113839004
Mycobacterium gordonae 24871004
Mycobacterium asiaticum 44760001
Mycobacterium aurum 48134004
Mycobacterium austroafricanum 27365009
Mycobacterium avium 83723009
Mycobacterium, avium-intracellulare group 58503001
Mycobacterium marinum 58869008
Mycobacterium boenickei 430995003
Mycobacterium bohemicum 430996002
Mycobacterium bovis 27142009
Mycobacterium branderi 113843000
Mycobacterium brisbanense 430998001
Mycobacterium brumae 113844006
Mycobacterium intracellulare 83841006
Mycobacterium canariasense 432476008
Mycobacterium canetti 414789006
Mycobacterium caprae 430579009
Mycobacterium celatum 103475000
Mycobacterium chelonae 243377008
Mycobacterium chesapeaki 430667000
Mycobacterium chitae 89896008
Mycobacterium chlorophenolicus chlorophenolicum 713611009
Mycobacterium chubuense 20498000
Mycobacterium confluentis 113845007
Mycobacterium conspicuum 113846008
Mycobacterium cookii 113847004
Mycobacterium cosmeticum 430580007
Mycobacterium diernhoferi 6199007
Mycobacterium doricum 430581006
Mycobacterium duvalii 66838002
Mycobacterium elephantis 385509008
Mycobacterium fallax 9939008
Mycobacterium farcinogenes 61708000
Mycobacterium flavescens 5885000
Mycobacterium fortuitum 243378003
Mycobacterium fortuitum complex 103474001
Mycobacterium fortuitum complex 103474001
Mycobacterium frederiksbergense 429917008
Mycobacterium gadium 74917007
Mycobacterium gastri 70463000
Mycobacterium genavense 103476004
Mycobacterium fortuitum 243378003
Mycobacterium gilvum 24618002
Mycobacterium goodii 127522008
Mycobacterium gordonae 24871004
Mycobacterium simiae 84180005
Mycobacterium haemophilum 21996001
Mycobacterium hassiacum 113848009
Mycobacterium heckeshornense 429919006
Mycobacterium heidelbergense 429920000
Mycobacterium hiberniae 113849001
Mycobacterium hodleri 113850001
Mycobacterium holsaticum 429946001
Mycobacterium houstonense 429947005
Mycobacterium immunogenum 428319005
Mycobacterium interjectum 113851002
Mycobacterium intermedium 113852009
Mycobacterium intracellulare 83841006
Mycobacterium paratuberculosis 74028009
Mycobacterium kansasii 1507005
Mycobacterium komossence 36249008
Mycobacterium kubicae 427768005
Mycobacterium lacticola 429948000
Mycobacterium lacus 430014001
Mycobacterium lentiflavum 113853004
Mycobacterium leprae 58242002
Mycobacterium kansasii 1507005
Mycobacterium madagascariense 113854005
Mycobacterium mageritense 385507005
Mycobacterium malmoense 73576007
Mycobacterium marinum 58869008
Mycobacterium microti 70801007
Mycobacterium fortuitum 243378003
Mycobacterium montefiorense 430740001
Mycobacterium moriokaense 9679001
Mycobacterium mucogenicum 113856007
Mycobacterium murale 385506001
Mycobacterium neoaurum 51459000
Mycobacterium neworleansense 430911006
Mycobacterium nonchromogenicum 21433000
Mycobacterium novocastrense 113857003
Mycobacterium obuense 41304005
Mycobacterium palustre 430912004
Mycobacterium parafortuitum 909007
Mycobacterium parascrofulaceum 428856007
Mycobacterium paratuberculosis 74028009
Mycobacterium parmense 430913009
Mycobacterium peregrinum 113859000
Mycobacterium phlei 78112006
Mycobacterium phocaicum 432888001
Mycobacterium pinnipedii 430914003
Mycobacterium marinum 58869008
Mycobacterium porcinum 91336002
Mycobacterium psychrotolerans 429901002
Mycobacterium rhodesiae 72130005
Mycobacterium scrofulaceum 20141004
Mycobacterium septicum 385508000
Mycobacterium sherrisii 429904005
Mycobacterium shimoidei 79817008
Mycobacterium shottsii 430487007
Mycobacterium simiae 84180005
Mycobacterium smegmatis 53114006
Mycobacterium sphagni 78444002
Mycobacterium szulgai 65613000
Mycobacterium terrae 45662006
Mycobacterium terrae complex 428765006
Mycobacterium thermoresistibile 20973006
Mycobacterium tokaiense 72477006
Mycobacterium triplex 113860005
Mycobacterium triviale 40333002
Mycobacterium tuberculosis 113861009
Mycobacterium tuberculosis complex 113858008
Mycobacterium tusciae 430489005
Mycobacterium ulcerans 40713003
Mycobacterium vaccae 54925005
Mycobacterium vanbaalenii 430490001
Mycobacterium wolinskyi 127523003
Mycobacterium xenopi 58663006
Mycobacterium, avium-intracellulare group 58503001
Genus Mycoplasma 78981005
Mycoplasma buccale 112338008
Mycoplasma faucium 76010005
Mycoplasma fermentans 88263009
Mycoplasma genitalium 5056007
Mycoplasma hominis 1290001
Mycoplasma fermentans 88263009
Mycoplasma lipophilum 11412008
Mycoplasma orale 46705005
Mycoplasma penetrans 113884002
Mycoplasma pirum 81314002
Mycoplasma pneumoniae 58720004
Mycoplasma primatum 112337003
Mycoplasma salivarium 2654003
Mycoplasma spermatophilum 113890003
Candida lipolytica 63775007
Myroides 115127008
Myroides odoratus 113558001
Naegleria 18441007
Pichia 4163004
Arthroderma 11860003
Necator 46112007
Neisseria 59083001
Neisseria canis 54978009
Moraxella catarrhalis 24226003
Neisseria cinerea 69312007
Moraxella cuniculi 46450008
Neisseria dentiae 113896009
Neisseria elongata 12638001
Neisseria elongata ss. elongata 54127003
Neisseria elongata ss. glycolytica 35693009
Neisseria elongata ss nitroreducens 113895008
Neisseria flavescens 75566007
Neisseria gonorrhoeae 68704007
Neisseria iguanae 113897000
Neisseria lactamica 54915000
Neisseria macacae 112341004
Neisseria meningitidis 17872004
Neisseria mucosa 81795000
Neisseria oralis 723475000
Moraxella ovis 112332009
Neisseria weaveri 113894007
Neisseria perflava 116412006
Neisseria polysaccharea 66768001
Neisseria sicca 49074002
Neisseria subflava 77700001
Neisseria weaveri 113894007
Neorickettsia 58579003
Neorickettsia sennetsu 423477000
Neosartorya 414826007
Neosartorya fischeri 414831009
Neoscytalidium dimidiatum 715363007
Nesterenkonia 414331003
Nesterenkonia halobia 113770004
Nigrospora 41278006
Nocardia 59674005
Nocardia abscessus 414863003
Nocardia africana 417342004
Nocardia anaemiae 47223080100008710
2
Nocardia aobensis 444683006
Nocardia araoensis 430602008
Nocardia arthritidis 427275005
Nocardia asiatica 426054003
Nocardia asteroides 30092002
Nocardia asteroides complex 414864009
Nocardia beijingensis 430848001
Nocardia brasiliensis 58970008
Nocardia brevicatena 70366009
Nocardia carnea 61208001
Nocardia otitidis caviarum 63087008
Nocardia cyriacigeorgica 414866006
Nocardia elegans 418717009
Nocardia farcinica 85516007
Nocardia higoensis 430654003
Nocardia inohanensis 430770006
Nocardia kruczakiae 450468006
Nocardia mexicana 85508529100008710
9
Nocardia niigatensis 430772003
Nocardia nova 37621001
Amycolatopsis orientalis 427705005
Nocardia otitidis caviarum 63087008
Nocardia otitidis caviarum 63087008
Nocardia paucivorans 414867002
Nocardia pneumoniae 431063007
Nocardia pseudobrasiliensis 414868007
Nocardia sienata 430672009
Nocardia testacea 430588000
Nocardia transvalensis 80379008
Nocardia veterana 414869004
Nocardia yamanashiensis 430661004
Nocardiopsis 23593005
Nocardiopsis dassonvillei 15526005
Nocardiopsis synnemataformans 416314008
Norovirus 407359000
Norwalk virus 10514003
Nutritionally variant streptococci 698214003
Obesumbacterium 50732004
Obesumbacterium proteus 28501001
Ochrobactrum 116423005
Ochrobactrum anthropi 116490002
Ochrobactrum intermedium 414926008
Ochroconis 116450000
Ochroconis constricta 116451001
Ochroconis gallopava 116453003
Ochroconis gallopava 116453003
Scolecobasidium humicola 47560005
Odoribacter 418523002
Odoribacter splanchnicus 446487001
Oerskovia 81194007
Ogataea 707829005
Pichia angusta 449402006
Ogataea polymorpha 707830000
Arthrographis 112406004
Oligella 112343001
Oligella ureolytica 11309009
Oligella urethralis 90341001
Geotrichum candidum 41625002
Genus Orbivirus 44725007
Orf virus 64753004
Orientia 114232006
Orientia tsutsugamushi 114233001
Orthoreovirus 243591001
Paecilomyces 26001000
Paecilomyces javanicus 51306001
Paecilomyces lilacinus 243514005
Paecilomyces marquandii 88336005
Paecilomyces variotii 20035009
Paenibacillus 114086007
Paenibacillus agaridevorans 429907003
Paenibacillus alvei 114088008
Paenibacillus edaphicus 8501000146105
Paenibacillus validus 114107004
Paenibacillus larvae 114098002
Paenibacillus lentimorbus 414989004
Paenibacillus macerans 114101003
Paenibacillus pabuli 114103000
Paenibacillus polymyxa 114105007
Paenibacillus popilliae 414990008
Paenibacillus provencensis 438962008
Paenibacillus thiaminolyticus 114106008
Paenibacillus urinalis 445240003
Paenibacillus validus 114107004
Pandoraea 414998001
Pandoraea apista 414999009
Pandoraea norimbergensis 415000009
Pandoraea pnomenusa 415001008
Pandoraea pulmonicola 415002001
Pandoraea sputorum 415004000
Pantoea 115013001
Pantoea agglomerans 115015008
Pantoea ananatis 115014007
Pantoea ananatis 115014007
Pantoea dispersa 115017000
Parabacteroides 447036003
Parabacteroides distasonis 447512008
Parabacteroides goldsteinii 5691000146107
Parabacteroides merdae 447513003
Paraburkholderia 723767007
Paraburkholderia fungorum 417285005
Paracoccus 415013003
Paracoccus yeei 415033004
Parascardovia 431018006
Parascardovia denticolens 433344009
Parvimonas 430005006
Parvimonas micra 434293007
Genus Parvovirus 11970002
Pasteurella 87579009
Pasteurella aerogenes 87075007
Pasteurella bettyae 113902004
Pasteurella caballi 113903009
Pasteurella canis 7784009
Pasteurella dagmatis 80948000
Mannheimia haemolytica 128385005
Pasteurella multocida 10879005
Pasteurella multocida ss. gallicida 1743002
Pasteurella multocida ss. multocida 71068007
Pasteurella multocida ss. septica 14298009
Pasteurella pneumotropica 32562008
Pasteurella stomatis 46827009
Actinobacillus ureae 1839009
Patulibacter 734237002
Genus Pectobacterium 422013009
Pediculus humanus 84936006
Pediococcus 243236007
Pediococcus acidilactici 243237003
Pediococcus pentosaceus 243242006
Aerococcus urinaeequi 430979003
Pedobacter 115128003
Pedobacter heparinus 113554004
Pedobacter piscium 113555003
Penicillium 42993004
Penicillium citrinum 48370005
Penicillium commune 67330005
Penicillium decumbens 415947003
Penicillium expansum 28266005
Penicillium griseofulvum 75778008
Paecilomyces lilacinus 243514005
Penicillium marneffei 71825007
Penicillium griseofulvum 75778008
Penicillium puberulum 54269009
Talaromyces ruber 724055009
Penicillium spinulosum 39115007
Penicillium verruculosum 82397008
Penicillium viridicatum 34886002
Peptococcus 20585006
Peptoniphilus asaccharolyticus 433440001
Peptococcus niger 112344007
Staphylococcus saccharolyticus 41103009
Peptoniphilus 430742009
Peptoniphilus asaccharolyticus 433440001
Peptoniphilus harei 433373007
Peptoniphilus ivorii 433375000
Peptoniphilus lacrimalis 433376004
Peptostreptococcus 243417000
Peptostreptococcus anaerobius 19217002
Peptoniphilus asaccharolyticus 433440001
Megasphaera elsdenii 26044001
Anaerococcus hydrogenalis 413519008
Anaerococcus lactolyticus 413520002
Finegoldia magna 417469002
Parvimonas micra 434293007
Anaerococcus octavius 413521003
Atopobium parvulum 113631003
Anaerococcus prevotii 413522005
Blautia producta 698205008
Anaerococcus tretradius 413524006
Anaerococcus vaginalis 413525007
Pseudallescheria boydii 91088000
Pseudallescheria boydii 91088000
Phaeoacremonium 415948008
Phaeoacremonium parasiticum 415950000
Phaeoannellomyces 243541000
Exophiala werneckii 83801002
Exophiala werneckii 83801002
Phaeococcomyces 86327004
Phaeococcomyces exophialae 51929003
Phialemonium 84481003
Phialemonium curvatum 80571005
Phialemonium dimorphosporum 419272001
Phialemonium obovatum 4074005
Lecythophora mutabilis 38749003
Phialophora 41402008
Phialophora americana 14516430100008710
8
Fonsecaea compacta 76124007
Fonsecaea compacta 76124007
Wangiella dermatitidis 20586007
Phialophora europaea 34677840100008710
8
Exophiala jeanselmei 38224003
Lecythophora hoffmannii 55153000
Exophiala jeanselmei 38224003
Fonsecaea pedrosoi 69356007
Pleurostomophora richardsiae 698239007
Exophiala spinifera 66283007
Phialophora verrucosa 67301003
Phoma 61019006
Photobacterium 115046007
Photobacterium damselae subsp damselae 387799003
Photorhabdus 115022000
Photorhabdus asymbiotica 415093002
Photorhabdus luminescens 115023005
Photorhabdus temperata 415094008
Pichia 4163004
Pichia angusta 449402006
Pichia anomala 427041001
Cyberlindnera fabianii 10151000087104
Pichia farinosa 243433002
Meyerozyma guilliermondii 29812000
Pichia kudriavzevii 16452009
Kodamaea ohmeri 447491002
Schwanniomyces polymorphus 717238009
Family Picornaviridae 407344006
Piedraia 50411008
Piedraia hortae 89782007
Pithomyces 12760009
Malassezia 18097004
Malassezia pachydermatis 51257000
Malassezia furfur 29619007
Malassezia furfur 29619007
Malassezia furfur 29619007
Malassezia pachydermatis 51257000
Plasmodium 34706006
Plasmodium falciparum 30020004
Plasmodium knowlesi 49918008
Plasmodium malariae 56395006
Plasmodium ovale 18508006
Plasmodium vivax 74746009
Plesiomonas 42929008
Plesiomonas shigelloides 38643006
Pleurostomophora 698238004
Pleurostomophora richardsiae 698239007
Pluralibacter 716344002
Pluralibacter gergoviae 716346000
Pluralibacter pyrinus 114455007
Genus Polyomavirus 407456008
Porphyromonas 114154000
Porphyromonas asaccharolyticus 115950003
Porphyromonas cangingivalis 114156003
Porphyromonas canoris 114157007
Porphyromonas cansulci 114158002
Porphyromonas catoniae 114159005
Porphyromonas circumentaria 114160000
Porphyromonas crevioricanis 114161001
Porphyromonas endodontalis 2401005
Porphyromonas gingivalis 114163003
Porphyromonas gingivicanis 114164009
Porphyromonas gulae 433019007
Porphyromonas levii 114165005
Porphyromonas macacae 114166006
Porphyromonas macacae 114166006
Porphyromonas somerae 450442004
Poxviridae 424976006
Pragia 115024004
Pragia fontium 115025003
Prevotella 114129000
Prevotella bivia 114131009
Prevotella buccae 114134001
Prevotella buccalis 114135000
Prevotella corporis 114136004
Prevotella dentalis 114137008
Prevotella denticola 114138003
Prevotella disiens 114139006
Prevotella enoeca 114140008
Prevotella heparinolytica 114141007
Prevotella intermedia 114142000
Prevotella loescheii 114143005
Prevotella marshii 417919003
Prevotella melaninogenica 114144004
Prevotella multiformis 418615005
Prevotella multisaccharivorax 418858007
Prevotella nigrescens 114145003
Prevotella oralis 114146002
Prevotella oralis group 440091000124102
Prevotella oris 114147006
Prevotella oulorum 419466004
Prevotella oulorum 419466004
Prevotella pallens 114149009
Prevotella ruminicola 115949003
Prevotella salivae 418278009
Prevotella shahii 419720005
Prevotella tannerae 114151008
Prevotella veroralis 114152001
Bacteroides zoogleoformans 425729002
Propionibacterium 34844008
Propionibacterium acidipropionici 2379005
Cutibacterium acnes 39473003
Propionibacterium australiense 433037008
Propionibacterium avidum 47473006
Propionibacterium cyclohexanicum 113916009
Propionibacterium freudenreichii 23871008
Propionibacterium granulosum 87755005
Propioniferax innocus 114056000
Propionibacterium jensenii 86720000
Propionibacterium lymphophilum 26102005
Propionibacterium microaerophilum 431383004
Propionibacterium prionicus 113919002
Propionibacterium propionicum 427413007
Propionibacterium thoenii 30087004
Propionibacterium thoenii 30087004
Propioniferax 114055001
Propioniferax innocus 114056000
Propionimicrobium 429177000
Propionimicrobium lymphophilum 429395008
Proteus 50517009
Proteus hauseri 417592004
Providencia alcalifaciens 46349009
Proteus mirabilis 73457008
Proteus myxofaciens 86145008
Proteus penneri 45298005
Providencia rettgeri 14196002
Proteus vulgaris 45834001
Prototheca 37563009
Sarcinosporon inkin 243547001
Prototheca wickerhamii 70523003
Prototheca zopfii 32768009
Kingdom Protozoa 417396000
Providencia 112284001
Providencia alcalifaciens 46349009
Providencia rustigianii 19196004
Providencia heimbachae 47300009
Providencia rettgeri 14196002
Providencia rustigianii 19196004
Providencia stuartii 1445008
Pseudallescheria 54930009
Pseudallescheria boydii 91088000
Pseudallescheria 54930009
Pseudallescheria boydii 91088000
Pseudoclavibacter 440171004
Pseudoflavonifractor 447037007
Pseudoflavonifractor capillosus 447428000
Pseudomonas 57032008
Delftia acidovorans 20432002
Pseudomonas aeruginosa 52499004
Pseudomonas alcaligenes 46247008
Burkholderia gladioli 113671008
Burkholderia gladioli 113671008
Stenotrophomonas maltophilia 113697002
Stenotrophomonas maltophilia 113697002
Burkholderia cepacia 113669008
Pseudomonas stutzeri 58024003
Pseudomonas chlororaphis 63949003
Burkholderia gladioli 113671008
Acidovorax delafieldii 113685003
Brevundimonas diminuta 113689009
Acidovorax facilis 113686002
Pseudomonas fluorescens 39289003
Burkholderia gladioli 113671008
Chryseomonas luteola 33919008
Burkholderia mallei 113674000
Stenotrophomonas maltophilia 113697002
Pseudomonas marginalis 116414007
Pseudomonas mendocina 59419001
Pseudomonas monteilii 113930004
Pseudomonas mosselii 437937006
Burkholderia cepacia 113669008
Alcaligenes faecalis 25223004
Pseudomonas oryzihabitans 113931000
Sphingomonas paucimobilis 243350004
Pseudomonas stutzeri 58024003
Pseudomonas pertucinogena 17191002
Ralstonia pickettii 114053008
Pseudomonas pseudoalcaligenes 30955004
Burkholderia pseudomallei 116399000
Pseudomonas putida 68608003
Shewanella putrefaciens 113700003
Burkholderia pyrrocinia 113677007
Pseudomonas stutzeri 58024003
Comamonas testosteroni 43721005
Pseudomonas veronii 113940001
Brevundimonas vesicularis 113690000
Pseudoramibacter 115131002
Pseudoramibacter alactolyticus 113828002
Pseudoxanthomonas 428474009
Pseudoxanthomonas koreensis 698063009
Pseudozyma 415958007
Pseudozyma aphidids 415959004
Psychrobacillus 709302003
Psychrobacter 34412002
Psychrobacter immobilis 70465007
Psychrobacter phenylpyruvicus 113941002
Aureobasidium 34121008
Aureobasidium pullulans 39129008
Orf virus 64753004
Pyrenochaeta 33478003
Pyrenochaeta romeroi 79274002
Rabies virus 59881000
Rahnella 48569008
Rahnella aquatilis 10021006
Ralstonia 415234001
Cupriavidus gilardii 416329005
Ralstonia insidiosa 415235000
Ralstonia mannitolilytica 415236004
Ralstonia pickettii 114053008
Cupriavidus respiraculi 416495009
Rhinocladiella aquaspersa 45462000
Raoultella 417468005
Raoultella ornithinolytica 416832000
Raoultella planticola 416264004
Raoultella terrigena 416096003
Rapid growing mycobacteria 116494006
Orthoreovirus 243591001
Genus Respirovirus 407487005
Genus Rhabdovirus 407327007
Rhinocladiella 21690009
Rhinocladiella aquaspersa 45462000
Rhinocladiella atrovirens 243545009
Fonsecaea compacta 76124007
Fonsecaea compacta 76124007
Fonsecaea pedrosoi 69356007
Exophiala spinifera 66283007
Rhinosporidium 65470001
Rhizobium 415303003
Rhizobium radiobacter 438107000
Rhizobium rubi 438073004
Rhizobium vitis 438218005
Rhizomucor 85711000
Rhizomucor miehei 61389009
Rhizomucor pusillus 70399006
Rhizopus 17683005
Rhizopus arrhizus 87002009
Rhizopus microsporus 14504004
Rhizopus stolonifer 37060000
Rhizopus arrhizus 87002009
Rhizopus stolonifer 37060000
Rhodococcus 34534002
Tsukamurella paurometabola 113510005
Gordonia bronchialis 113646005
Mycobacterium chlorophenolicus chlorophenolicum 713611009
Gordonia sputi 113648006
Rhodococcus equi 80771008
Rhodococcus erythropolis 22478004
Rhodococcus fascians 28901005
Rhodococcus globerulus 44348004
Rhodococcus gordoniae 430885009
Rhodococcus fascians 28901005
Gordonia sputi 113648006
Rhodococcus rhodochrous 54379008
Rhodococcus rhodochrous 54379008
Gordonia rubripertincta 113647001
Gordonia terrae 113649003
Rhodotorula 51976007
Rhodotorula glutinis 69250004
Rhodotorula minuta 416777007
Rhodotorula rubra 86724009
Rhodotorula pilimanae 243470006
Rhodotorula rubra 86724009
Rickettsia 62065006
Rickettsia akari 30769009
Rickettsia conorii 32691002
Rickettsia parkeri 85738007
Rickettsia prowazekii 28499009
Bartonella quintana 103511001
Rickettsia rickettsii 18054009
Rickettsia sibirica 85288000
Orientia tsutsugamushi 114233001
Rickettsia typhi 79284001
Riemerella 115145008
Riemerella anatipestifer 113658005
Rift Valley fever virus 28335002
Robinsoniella 450447005
Robinsoniella peoriensis 450448000
Bartonella elizabethae 103513003
Bartonella henselae 103510000
Bartonella quintana 103511001
Bartonella vinsonii 103512008
Roseomonas 115159001
Roseomonas cervicalis 113711006
Roseomonas gilardii 113710007
Roseomonas mucosa 415351006
Rotavirus 417542000
Rothia 90163001
Rothia aeria 417029007
Rothia dentocariosa 35379007
Rothia mucilaginosa 416544005
Rubella virus 5210005
Measles virus 52584002
Rubivirus 45156000
Ruminococcus 28907009
Ruminococcus gnavus 88513000
Blautia hansenii 449574005
Blautia producta 698205008
Rummeliibacillus 450458001
Rummeliibacillus pycnus 450459009
Saccharomonospora 103501008
Saccharomonospora glauca 103504000
Saccharomonospora viridis 103505004
Saccharomyces 27069008
Saccharomyces cerevisiae 58296003
Saccharopolyspora 115144007
Saccharopolyspora rectivirgula 113657000
Saksenaea 71259001
Saksenaea vasiformis 58478009
Human cytomegalovirus 5 243579005
Salmonella 27268008
Salmonella bongori 398393000
Salmonella enterica 110378009
Saprochaete 8091000146106
Sarcina 58039002
Micrococcus luteus 48299003
Sarcina ventriculi 22267009
Sarcinosporon inkin 243547001
Exophiala werneckii 83801002
Sarcinosporon 243546005
Sarcinosporon inkin 243547001
Sarcocystis 34666003
Sarcocystis hominis 17696006
Sarcocystis lindemanni 71131007
Sarcocystis suihominis 35193008
Sarcoptes scabiei 67333007
SARS-CoV-2 840533007
Sarcoptes scabiei 67333007
Scardovia 438181001
Scardovia inopinata 441142005
Scedosporium 31901009
Scedosporium apiospermum 26861000146102
Scedosporium boydii 24305000
Scedosporium inflatum 69564000
Scedosporium inflatum 69564000
Schizophyllum 243444005
Schizophyllum commune 243445006
Schwanniomyces 713330003
Schwanniomyces polymorphus 717238009
Scolecobasidium 14462004
Ochroconis constricta 116451001
Scolecobasidium humicola 47560005
Scopulariopsis 39949000
Scopulariopsis acremonium 59520005
Scopulariopsis brevicaulis 3245004
Scopulariopsis brumptii 243523008
Scopulariopsis candida 243524002
Scytalidium 12678008
Neoscytalidium dimidiatum 715363007
Scytalidium hyalinum 6430000
Selenomonas 85986007
Selenomonas artemidis 6754006
Selenomonas dianae 86435000
Selenomonas flueggei 27333006
Selenomonas infelix 43571005
Selenomonas noxia 70096005
Selenomonas sputigena 23595003
Sepedonium 17046009
Serpulina 115162003
Brachyspira pilosicoli 113517008
Serratia 42025004
Serratia entomophila 76656001
Serratia ficaria 802004
Serratia fonticola 112329006
Serratia grimesii 115005002
Serratia liquefaciens 23787004
Serratia marcescens 33522002
Serratia rubidaea 55825002
Serratia odorifera 10413007
Serratia plymuthica 28955009
Serratia proteamaculans 116135003
Serratia quinivorans 438199009
Serratia rubidaea 55825002
Serratia ureilytica 450416004
Shewanella 115158009
Shewanella algae 113702006
Shewanella putrefaciens 113700003
Shigella 77352002
Shigella boydii 55462008
Shigella dysenteriae 43612004
Shigella flexneri 85729005
Shigella sonnei 4298009
Simian virus 40 38244009
Simonsiella 16344005
Alysiella crassa 444924000
Simonsiella muelleri 74269008
Slackia 432913003
Slackia exigua 434236002
Slackia heliotrinireducens 437984006
Small-colony-forming beta-hemolytic group A streptococci 415534000
Small-colony-forming beta-hemolytic group C streptococci 415535004
Small-colony-forming beta-hemolytic group G streptococci 415536003
Variola virus 243568000
Sneathia 416469007
Sneathia sanguinegens 416737004
Solibacillus 699375003
Solibacillus silvestris 429471007
Solobacterium 415558001
Solobacterium moorei 413348001
Sphingobacterium 43780008
Sphingobacterium faecium 113953003
Pedobacter heparinus 113554004
Flavobacterium mitzutaii 113749005
Sphingobacterium multivorum 51595006
Pedobacter piscium 113555003
Sphingobacterium spiritivorum 61675006
Sphingobacterium thalpophilum 113954009
Sphingomonas 115130001
Sphingomonas parapaucimobilis 243349004
Sphingomonas paucimobilis 243350004
Spirillum 54700005
Sporobolomyces 112398006
Sporobolomyces roseus 243481009
Sporobolomyces salmonicolor 243446007
Sporolactobacillus 439462006
Sporolactobacillus laevolacticus 8331000146107
Sporopachydermia 415961008
Sporosarcina 115164002
Sporothrix 63100009
Sporothrix cyanescens 20302006
Sporothrix schenckii 32662000
Sporothrix schenckii 32662000
Sporotrichum 415963006
Sporothrix schenckii 32662000
Sporotrichum pruinosum 415964000
Sporothrix schenckii 32662000
Sporothrix schenckii 32662000
St. Louis encephalitis virus 58432001
Stachybotrys 61175005
Stachybotrys chartarum 418469000
Staphylococcus 65119002
Staphylococcus arlettae 72465001
Staphylococcus aureus 3092008
Staphylococcus auricularis 45654003
Staphylococcus capitis 40347003
Staphylococcus capitis ss capitis 113962001
Staphylococcus capitis subspecies urealyticus 103492009
Staphylococcus caprae 76969000
Staphylococcus carnosus 9784002
Staphylococcus carnosus carnosus 438905007
Staphylococcus carnosus utilis 438733001
Macrococcus caseolyticus 416613009
Staphylococcus chromogenes 56629004
Staphylococcus cohnii 66872005
Staphylococcus cohnii ss cohnii 113963006
Staphylococcus cohnii subspecies urealyticus 103493004
Staphylococcus condimenti 439185000
Staphylococcus delphini 113964000
Staphylococcus epidermidis 60875001
Staphylococcus equorum 28217008
Staphylococcus equorum equorum 438005005
Staphylococcus equorum linens 438164005
Staphylococcus felis 113965004
Staphylococcus fleurettii 438257002
Staphylococcus gallinarum 8056006
Staphylococcus haemolyticus 83452006
Staphylococcus hominis 44827007
Staphylococcus hominis hominis 432505008
Staphylococcus hominis novobiosepticus 438202004
Staphylococcus hyicus 19683001
Staphylococcus chromogenes 56629004
Staphylococcus hyicus 19683001
Staphylococcus intermedius 34605002
Staphylococcus kloosii 53227003
Staphylococcus lentus 40253001
Staphylococcus lugdunensis 103494005
Staphylococcus lutrae 113968002
Staphylococcus muscae 113969005
Staphylococcus nepalensis 438681002
Veillonella parvula 90435009
Staphylococcus pasteuri 103495006
Staphylococcus pettenkoferi 428731005
Staphylococcus piscifermentans 113970006
Staphylococcus pseudintermedius 427316000
Staphylococcus vitulinus 440569005
Staphylococcus saccharolyticus 41103009
Staphylococcus saprophyticus 19743000
Staphylococcus saprophyticus ss bovis 113972003
Staphylococcus saprophyticus ss saprophyticus 113973008
Staphylococcus schleiferi 131360000
Staphylococcus schleiferi subsp. coagulans 113974002
Staphylococcus schleiferi ss. schleiferi 103496007
Staphylococcus sciuri 70806002
Staphylococcus sciuri carnaticus 113975001
Staphylococcus lentus 40253001
Staphylococcus sciuri rodentium 113976000
Staphylococcus scuiri scuiri 113977009
Staphylococcus simulans 52122005
Staphylococcus succinus 438729008
Staphylococcus succinus casei 440815004
Staphylococcus succinus ss. succinus 441130000
Staphylococcus vitulinus 440569005
Staphylococcus warneri 63550006
Staphylococcus xylosus 32737005
Staphylococcus, coagulase negative 116197008
Staphylococcus, coagulase positive 127535004
Stemphylium 90824006
Stenotrophomonas 115656007
Stenotrophomonas maltophilia 113697002
Stephanoascus 415965004
Stephanoascus ciferrii 415966003
Rothia mucilaginosa 416544005
Streptobacillus 29295005
Streptobacillus moniliformis 16372003
Streptococcus 58800005
Streptococcus acidominimus 51182006
Granulicatella adiacens 113713009
Group B streptococcus 43492007
Streptococcus alactolyticus 34228005
Streptococcus anginosus group 415597009
Streptococcus anginosus 44304009
Streptococcus anginosus group 415597009
Streptococcus anginosus-constellatus 70160008
Streptococcus australis 415598004
Enterococcus avium 87875008
Streptococcus bovis group 415599007
Streptococcus canis 88231003
Streptococcus gallolyticus 113985000
Enterococcus casseliflavus 30949009
Enterococcus cecorum 113722005
Streptococcus constellatus 76199005
Streptococcus constellatus subspecies constellatus 415601009
Streptococcus constellatus subspecies pharyngis 415602002
Streptococcus criceti 34838009
Streptococcus cristatus 113980005
Abiotrophia defectiva 113714003
Streptococcus dentisani 708952006
Streptococcus dolonei 12704003
Enterococcus durans 46464008
Streptococcus dysgalactiae 40812000
Streptococcus dysgalactiae subsp. dysgalactiae 113982002
Streptococcus dysgalactiae subsp. equisimilis 128338004
Granulicatella elegans 115944008
Streptococcus entericus 437956001
Streptococcus equi 12447002
Streptococcus equi subsp. equi 113984001
Streptococcus equi subsp. zooepidemicus 33708000
Streptococcus equinus 72646003
Enterococcus faecalis 78065002
Enterococcus faecium 90272000
Streptococcus ferus 10049004
Enterococcus gallinarum 53233007
Streptococcus gallolyticus 113985000
Streptococcus gallolyticus subspecies gallolyticus 421544007
Streptococcus gallolyticus subspecies macedonicus 421004005
Streptococcus gallolyticus subspecies pasteurianus 421253004
Lactococcus garvieae 27716002
Streptococcus gordonii 113986004
Blautia hansenii 449574005
Streptococcus hyovaginalis 113988003
Streptococcus infantarius 415603007
Streptococcus lutetiensis 415605000
Streptococcus infantarius subspecies infantarius 432506009
Streptococcus infantis 415604001
Streptococcus iniae 79050007
Streptococcus intermedius 62170002
Streptococcus alactolyticus 34228005
Lactococcus lactis 62079003
Streptococcus lutetiensis 415605000
Streptococcus macacae 59717000
Streptococcus anginosus group 415597009
Streptococcus mitis 57997003
Streptococcus mitis group 127539005
Gemella morbillorum 113765006
Streptococcus mutans 214001
Streptococcus mutans group 127536003
Streptococcus oligofermentans 440296007
Streptococcus oralis 19870004
Streptococcus ovis 438035003
Streptococcus parasanguinis 113990002
Streptococcus parauberis 113991003
Atopobium parvulum 113631003
Streptococcus gallolyticus subspecies pasteurianus 421253004
Streptococcus peroris 416347004
Streptococcus pluranimalium 438187002
Streptococcus pneumoniae 9861002
Streptococcus porcinus 59512008
Blautia producta 698205008
Streptococcus pseudopneumoniae 420470004
Streptococcus pseudoporcinus 429189003
Streptococcus pyogenes 80166006
Streptococcus ratti 10667007
Enterococcus saccharolyticus 103438005
Streptococcus salivarius 39888004
Streptococcus salivarius group 127537007
Streptococcus salivarius subsp. salivarius 84684000
Streptococcus salivarius subsp. thermophilus 23310006
Streptococcus sanguinis 113993000
Streptococcus sanguinis group 115658008
Streptococcus iniae 79050007
Streptococcus sinensis 438909001
Streptococcus sobrinus 43777007
Streptococcus suis 7912006
Streptococcus salivarius subsp. thermophilus 23310006
Streptococcus tigurinus 699479005
Streptococcus uberis 13250005
Streptococcus vestibularis 113998009
Streptococcus, group C 89181007
Streptococcus, group D 55547008
Streptococcus, group F 83503005
Streptococcus, group G 75012005
Streptomyces 47304000
Streptomyces albus 114001000
Streptomyces bikiniensis 438930005
Streptomyces candidus 438237001
Streptomyces griseus 114000004
Streptomyces clavuligerus 438736009
Streptomyces griseus 114000004
Streptomyces filamentosus 438231000
Streptomyces griseus 114000004
Streptomyces lincolnensis 437827000
Streptomyces filamentosus 438231000
Streptomyces griseus 114000004
Streptomyces somaliensis 11007001
Streptomyces spectabilis 438852000
Streptomyces thermovulgaris 437780007
Streptomyces venezuelae 66591004
Strongyloides 10823008
Succinivibrio 66866005
Succinivibrio dextrinosolvens 63902002
Sutterella 417407002
Sutterella wadsworthensis 417645005
Suttonella 116391002
Suttonella indologenes 116392009
Syncephalastrum 62678005
Syncephalastrum racemosum 243426002
Taenia 28625000
Talaromyces 724054008
Penicillium marneffei 71825007
Talaromyces ruber 724055009
Tanapox virus 69683003
Tannerella 419107003
Tannerella forsythia 420048009
Legionella maceachernii 116379006
Legionella micdadei 116380009
Tatumella 12162005
Tatumella ptyseos 1546007
Tetragenococcus 417005000
Tetragenococcus halophilus 438324001
Tetragenococcus solitarius 431990001
Thermoactinomyces 28042005
Tick-borne encephalitis virus 32323003
Tissierella 37421007
Tissierella praeacuta 75376009
Togaviridae 129231002
Neoscytalidium dimidiatum 715363007
Candida lipolytica 63775007
Candida utilis 243464000
Candida pararugosa 702328004
Candida haemulonii 243452008
Candida inconspicua 283871001
Candida pintolopesii 283870000
Candida utilis 243464000
Candida utilis 243464000
Toxocara 39091000
Toxoplasma 61949005
Toxoplasma gondii 4649006
Trabulsiella 243308004
Trabulsiella guamensis 243309007
Treponema 30345008
Treponema carateum 14562002
Treponema pallidum 72904005
Trichinella 37900004
Trichoderma 83597000
Trichoderma viride 61143007
Trichomonas 3764006
Trichophyton 88578003
Trichosporon 62289009
Trichosporon asahii 243475001
Trichosporon beigelii 39268007
Trichosporon beigelii 39268007
Trichosporon beigelii 39268007
Sarcinosporon inkin 243547001
Trichosporon loubieri 415972003
Trichosporon mucoides 243478004
Trichosporon mycotoxinivorans 415973008
Trichosporon ovoides 243479007
Geotrichum klebahnii 446493009
Trichosporon pullulans 25783003
Trichostrongylus 20065004
Trichothecium 70034005
Trichuris 2572000
Tropheryma 417733009
Tropheryma whipplei 417060007
Trueperella 704974007
Trueperella bernardiae 704975008
Trueperella pyogenes 258933002
Trypanosoma 40740003
Trypanosoma brucei 243659009
Trypanosoma brucei rhodesiense 79513002
Trypanosoma cruzi 88274000
Trypanosoma cruzi 88274000
Trypanosoma rangeli 72637009
Trypanosoma cruzi 88274000
Tsukamurella 115135006
Tsukamurella inchonensis 113509000
Tsukamurella paurometabola 113510005
Tsukamurella pulmonis 113511009
Tsukamurella strandjordii 417316004
Tsukamurella tyrosinosolvens 113512002
Turicella 415762009
Turicella otitidis 415763004
Turicibacter 438726001
Turicibacter sanguinis 440839009
Ulocladium 65789000
Ureaplasma 29680004
Ureaplasma parvum 438391000
Ureaplasma urealyticum 12006007
Ustilago 49086004
Vaccinia virus 13126002
Vagococcus 116416009
Vagococcus fluvialis 116418005
Vancomycin resistant Enterococcus 113727004
Vancomycin resistant Enterococcus faecalis 712663006
Vancomycin resistant Enterococcus faecium 712665004
Varicellovirus 80298008
Human herpesvirus 3 19551004
Varicellovirus 80298008
Variola virus 243568000
Veillonella 29875005
Veillonella parvula 90435009
Veillonella atypica 21633009
Veillonella caviae 63486005
Veillonella criceti 77243008
Veillonella dispar 29564004
Veillonella montpellierensis 438330001
Veillonella parvula 90435009
Veillonella ratti 4427009
Veillonella rodentium 78654008
Venezuelan equine encephalomyelitis virus 62958000
Verticillium 50734003
Vibrio 34872001
Vibrio alginolyticus 45749000
Vibrio harveyi 84003007
Vibrio cholerae 75953000
Vibrio cincinnatiensis 36764009
Photobacterium damselae subsp damselae 387799003
Campylobacter fetus 84210007
Vibrio fluvialis 43199008
Vibrio furnissii 6387008
Vibrio harveyi 84003007
Vibrio metschnikovii 28382009
Vibrio mimicus 11776003
Vibrio parahaemolyticus 11736008
Campylobacter sputorum 91524009
Wolinella succinogenes 32360004
Vibrio harveyi 84003007
Vibrio vulnificus 55905000
Virgibacillus 114108009
Virgibacillus pantothenticus 114109001
Streptococcus, viridans group 31703004
Virus 49872002
Wangiella 70200002
Wangiella dermatitidis 20586007
Wautersia 415834009
Cupriavidus gilardii 416329005
Cupriavidus pauculus 429465001
Cupriavidus respiraculi 416495009
Weeksella 28853003
Weeksella virosa 83326004
Bergeyella zoohelcum 113718000
Weissella 118293006
Weissella confusa 113639001
West Nile virus 57311007
Western equine encephalomyelitis virus 11428003
Wolinella 84909009
Campylobacter curvus 116037008
Campylobacter rectus 113525005
Wolinella succinogenes 32360004
Xanthomonas 21544006
Stenotrophomonas maltophilia 113697002
Xenorhabdus 22423005
Photorhabdus luminescens 115023005
Xenorhabdus nematophila 57111002
Xenotropic murine leukemia virus-related virus 445325002
Yeast 62093005
Yellow fever virus 26630006
Yersinia 4668009
Yersinia aldovae 91246002
Yersinia aleksiciae 450391006
Yersinia bercovieri 103434007
Yersinia enterocolitica 65255000
Yersinia frederiksenii 85159008
Yersinia intermedia 10334001
Yersinia kristensenii 91042006
Yersinia mollaretii 103435008
Yersinia pestis 54365000
Yersinia pseudotuberculosis 90530002
Yersinia rohdei 87145000
Yersinia ruckeri 64125009
Yokenella 14943005
Yokenella regensburgei 89477001
Zika virus 50471002
Clostridium oroticum 29280008
It is possible that your laboratory may identify an organism that cannot be found when referencing the NHSN Organ
is not reportable. If you have an organism which is not found on the NHSN Organism List, please conta

NHSN Code NHSN Display Name

ABISP Abiotrophia
GRADJ*2 Abiotrophia adiacens
GRADJ*3 Abiotrophia adjacens
STRDF Abiotrophia defectiva
GRANELEG*1 Abiotrophia elegans
ACANT Acanthamoeba
ACHOSP Acholeplasma
ACHOLAID Acholeplasma laidlawii
ACHOOCUL Acholeplasma oculi
ACHSP Achromobacter
ACHDENI Achromobacter denitrificans
ACHPIEC Achromobacter piechaudii
ACHRUHL Achromobacter ruhlandii
ALCXYL Achromobacter xylosoxidans
ACHXYL Achromobacter xylosoxidans xylosoxidans
ACISP Acidaminococcus
ACIFE Acidaminococcus fermentans
AFB Acid-fast bacillus
ACIDSP Acidovorax
ACDEL Acidovorax delafieldii
ACIDFACI Acidovorax facilis
ACIDTEMP Acidovorax temperans
ACS Acinetobacter
ACBA Acinetobacter baumannii
ACICBA Acinetobacter calcoaceticus
ACCA Acinetobacter calcoaceticus-baumannii complex
ACHA Acinetobacter haemolyticus
ACJH Acinetobacter johnsonii
ACJU Acinetobacter junii
ACLW Acinetobacter lwoffi
ACINNOSO Acinetobacter nosocomialis
ACINPITT Acinetobacter pittii
ACIRADI Acinetobacter radioresistens
ACISCHI Acinetobacter schindleri
ACIURSI Acinetobacter ursingii
PSEBOY*5 Acladium castellani
SCEDBOYD*3 Acladium castellanii
ACRE Acremonium
ACREALAB Acremonium alabamensis
ACREKILI Acremonium kiliense
ACREPOTR Acremonium potroni
ACREPOTR*1 Acremonium potronii
ACRERECI Acremonium recifei
ACRESTRI Acremonium strictum
RHINAQUA*2 Acrotheca aquaspersa
ACBSP Actinobacillus
HAEACT*1 Actinobacillus actinomycetemcomitans
ACBEQ Actinobacillus equuli
ACBHOMI Actinobacillus hominis
ACBLI Actinobacillus lignieresii
ACBSU Actinobacillus suis
ACURE Actinobacillus ureae
ACTME*1 Actinobacterium meyeri
ACTISP Actinobaculum
ACTIMASS Actinobaculum massiliense
ACTISCHA*1 Actinobaculum schaalii
ACTIURIN*1 Actinobaculum urinale
ACTINSP Actinomadura
ACTINLATI Actinomadura latina
ACTINMADU Actinomadura madurae
ACTINPELL Actinomadura pelletieri
ACTSP Actinomyces
TRUEBERN*1 Actinomyces bernardiae
ACTBO Actinomyces bovis
ACTCARD Actinomyces cardiffensis
ACTDENT Actinomyces dentalis
ACTEURO Actinomyces europaeus
ACTFUNK Actinomyces funkei
ACTGE Actinomyces georgiae
ACTGR Actinomyces gerencseriae
ACTGRAE Actinomyces graevenitzii
ACTHONG Actinomyces hongkongensis
ACTIS Actinomyces israelii
ACTME Actinomyces meyeri
ACTNA Actinomyces naeslundii
ACTNASI Actinomyces nasicola
ACTNEUI Actinomyces neuii
ACTOD Actinomyces odontolyticus
ACTORIC Actinomyces oricola
ACTORIS Actinomyces oris
ARCPY*1 Actinomyces pyogenes
ACTRADI Actinomyces radicidentis
ACTRADIN Actinomyces radingae
ACTTURI Actinomyces turicensis
ACTUROG Actinomyces urogenitalis
ACTVI Actinomyces viscosus
ACTINOTISP Actinotignum
ACTISCHA Actinotignum schaalii
ACTIURIN Actinotignum urinale
AEROBE Aerobe
AEGU Aerococcus
AECH Aerococcus christensenii
AESGN Aerococcus sanguinicola
AEUR Aerococcus urinae
AEURQ Aerococcus urinaeequi
AEURH Aerococcus urinaehominis
AEVI Aerococcus viridans
AES Aeromonas
AERBEST Aeromonas bestiarum
AERPUN Aeromonas caviae
AERCAVI Aeromonas caviae complex
AERENCH Aeromonas encheleia
AERTR*1 Aeromonas enteropelogenes
AEREUCR Aeromonas eucrenophila
AH Aeromonas hydrophila
AERHYDR Aeromonas hydrophila complex
AERJA Aeromonas jandaei
AERME Aeromonas media
AERMOLL Aeromonas molluscorum
AERPOPO Aeromonas popoffii
AERPUN*1 Aeromonas punctata
AERSA Aeromonas salmonicida
AERSC Aeromonas schubertii
AERSIMI Aeromonas simiae
AERSOB Aeromonas sobria
AERTR Aeromonas trota
AEVER Aeromonas veronii
AFIPSP Afipia
AFIPCLEV Afipia clevelandensis
AFIPFELI Afipia felis
AGGRSP Aggregatibacter
HAEACT Aggregatibacter actinomycetemcomitans
HAEAP Aggregatibacter aphrophilus
AGGRSEGN Aggregatibacter segnis
AGSP Agrobacterium
RHIRAD*1 Agrobacterium radiobacter
AGROSP Agromyces
ALSP Alcaligenes
BORBR*1 Alcaligenes bronchisepticus
ALFE Alcaligenes faecalis
ALFE*1 Alcaligenes odorans
ACHPIEC*1 Alcaligenes piechaudii
ALCXYL*1 Alcaligenes xylosoxidans
ALXY Alcaligenes xylosoxidans xylosoxidans
CHRYSP*1 Aleurisma
SCEDAPIO*2 Aleurisma apiospermum
ALISSP Alishewanella
ALISFETA Alishewanella fetalis
ALISTSP Alistipes
BACPU Alistipes putredinis
PSEBOY*2 Allescheria boydii
ALLOSP Alloiococcus
ALLOOTIT Alloiococcus otitis
ALLOSSP Alloscardovia
ALLOOMNI Alloscardovia omnicolens
AS Alpha-hemolytic streptococcus
ASNSP Alpha-hemolytic Streptococcus, not S pneumoniae
ALTER Alternaria
ALTERALTE Alternaria alternata
ALTERDIAN Alternaria dianthicola
ALTERINFE Alternaria infectoria
ALTERALTE*1 Alternaria tenuis
ALTERTENU Alternaria tenuissima
ALYSSP Alysiella
ALYSCRAS Alysiella crassa
AMYCSP Amycolatopsis
AMYCORIE Amycolatopsis orientalis
ANS Anaerobe
ANAGNR Anaerobic Gram-negative bacillus
ANAGNCB Anaerobic Gram-negative coccobacillus
ANAGNC Anaerobic Gram-negative coccus
ANAGPR Anaerobic Gram-positive bacillus
ANAGPCB Anaerobic Gram-positive coccobacillus
ANAGPC Anaerobic Gram-positive coccus
ANSP Anaerobiospirillum
ANSU Anaerobiospirillum succiniciproducens
ANTHOM Anaerobiospirillum thomasii
ANASP Anaerococcus
PPSHY Anaerococcus hydrogenalis
ANALAC Anaerococcus lactolyticus
ANAOCTA Anaerococcus octavius
ANAPRE Anaerococcus prevotii
ANATETR Anaerococcus tetradius
ANAVAG Anaerococcus vaginalis
ANRSP Anaerorhabdus
ANRFU Anaerorhabdus furcosus
ANAPSP Anaplasma
ANCYC Ancylostoma
ANEUSP Aneurinibacillus
ANEUANEU Aneurinibacillus aneurinilyticus
ANGIO Angiostrongylus
APOPSP Apophysomyces
APOPELEG Apophysomyces elegans
AQUABSP Aquabacterium
AQUABPARV Aquabacterium parvum
PRPRO*2 Arachnia propionica
FLAVI*1 Arbovirus group B
ARCSP Arcanobacterium
TRUEBERN*2 Arcanobacterium bernardiae
ARCHA Arcanobacterium haemolyticum
ARCPLUR Arcanobacterium pluranimalium
ARCPY*3 Arcanobacterium pyogenes
ACOSP Arcobacter
ACOBUTZ Arcobacter butzleri
ACONI Arcobacter nitrofigilis
ARETU Arenavirus
ARSENISP Arsenicicoccus
ARSENIBOLI Arsenicicoccus bolidensis
ARTSP Arthrobacter
ARTAGIL Arthrobacter agilis
ARTALBU Arthrobacter albus
ARTARIL Arthrobacter arilaitensis
ARTASTR Arthrobacter astrocyaneus
ARTAURE Arthrobacter aurescens
ARTBERG Arthrobacter bergerei
ARTCHLO Arthrobacter chlorophenolicus
ARTCITR Arthrobacter citreus
ARTCREA Arthrobacter creatinolyticus
ARTCRYS Arthrobacter crystallopoietes
ARTCUMM Arthrobacter cumminsii
ARTFLAV Arthrobacter flavus
ARTGAND Arthrobacter gandavensis
ARTGANG Arthrobacter gangotriensis
ARTGLOB Arthrobacter globiformis
ARTHIST Arthrobacter histidinolovorans
ARTILIC Arthrobacter ilicis
ARTKERG Arthrobacter kerguelensis
ARTKORE Arthrobacter koreensis
ARTLUTE Arthrobacter luteolus
ARTMETH Arthrobacter methylotrophus
ARTMYSO Arthrobacter mysorens
ARTNASI Arthrobacter nasiphocae
ARTNICO Arthrobacter nicotianae
ARTNICOT Arthrobacter nicotinovorans
ARTNITR Arthrobacter nitroguajacolicus
ARTORYZ Arthrobacter oryzae
ARTOXYD Arthrobacter oxydans
ARTPASC Arthrobacter pascens
ARTPOLY Arthrobacter polychromogenes
ARTPROT Arthrobacter protophormiae
ARTPSYC Arthrobacter psychrolactophilus
ARTPSYCH Arthrobacter psychrophenolicus
ARTRAMO Arthrobacter ramosus
ARTRHOM Arthrobacter rhombi
ARTROSE Arthrobacter roseus
ARTRUSS Arthrobacter russicus
ARTSCLE Arthrobacter scleromae
PP*2 Arthrobacter siderocapsulatus
ARTSULF Arthrobacter sulfonivorans
ARTSULFU Arthrobacter sulfureus
ARTURAT Arthrobacter uratoxydans
ARTUREA Arthrobacter ureafaciens
CORVAR*2 Arthrobacter variabilis
ARTVISC Arthrobacter viscosus
ARTWOLU Arthrobacter woluwensis
ARTHSP Arthroderma
ARTHRSP Arthrographis
ASCAR Ascaris
ASU Aspergillus
ASPCAND Aspergillus candidus
ASPCLAV Aspergillus clavatus
ASPDEFL Aspergillus deflectus
ASPFLAV Aspergillus flavipes
AF Aspergillus flavus
ASPFU Aspergillus fumigatus
ASPGLAU Aspergillus glaucus
ASPNIDU Aspergillus nidulans
ASPNI Aspergillus niger
ASPNIVE Aspergillus niveus
ASPOCHR Aspergillus ochraceus
ASPOR Aspergillus oryzae
ASPPARA Aspergillus parasiticus
ASPREST Aspergillus restrictus
ASPSYDO Aspergillus sydowii
ASPTERR Aspergillus terreus
ASPUSTU Aspergillus ustus
ASPVERS Aspergillus versicolor
ASPWENT Aspergillus wentii
ASTTU Astroviridae
ATOSP Atopobium
ATOFOSS Atopobium fossor
ATOMIN Atopobium minutum
ATOPAR Atopobium parvulum
ATORIM Atopobium rimae
ATOVAGI Atopobium vaginae
AUREIALTA*1 Aurantimonas altamirensis
AUREISP Aureimonas
AUREIALTA Aureimonas altamirensis
MICRLIQU*1 Aureobacterium liquefaciens
AURESP Aureobasidium
AUREPULL Aureobasidium pullulans
AVERSP Averyella
AZORHSP Azorhizobium
AZORHCAUL Azorhizobium caulinodans
AZOSSP Azospirillum
AZOSBRAS Azospirillum brasilense
CANLIP*1 Azymoprocandida lipolytica
PARVOB19 B19 virus
BABES Babesia
BABMI Babesia microti
BAC Bacillus
BAEOL Bacillus aeolius
BAERI Bacillus aerius
BAGAR Bacillus agaradhaerens
BREVIAGRI*1 Bacillus agri
BALCA Bacillus alcalophilus
BALGI Bacillus algicola
PAEALV*1 Bacillus alvei
BAMYL Bacillus amyloliquefaciens
ANEUANEU*1 Bacillus aneurinolyticus
BA Bacillus anthracis
BAQUI Bacillus aquimaris
BARSE Bacillus arseniciselenatis
BASAH Bacillus asahii
BATRO Bacillus atrophaeus
BAZOT Bacillus azotoformans
BBADI Bacillus badius
BBARB Bacillus barbaricus
BBATA Bacillus bataviensis
BBENZ Bacillus benzoevorans
BBORO Bacillus boroniphilus
BREBRE*1 Bacillus brevis
BBUTA Bacillus butanolivorans
BCARB Bacillus carboniphilus
BREVICENT*1 Bacillus centrosporus
BC Bacillus cereus
BCERG Bacillus cereus group
BCHIT Bacillus chittonlyticus
BACCIR Bacillus circulans
BACCIRG Bacillus circulans group
BCLARK Bacillus clarkii
BCLAUS Bacillus clausii
BACCOA Bacillus coagulans
BCOHN Bacillus cohnii
BDECI Bacillus decisifrondis
BDECO Bacillus decolorationis
BDIPS Bacillus dipsosauri
BDREN Bacillus drentensis
BEDAP*1 Bacillus edaphicus
BEHIM Bacillus ehimensis
BENDO Bacillus endophyticus
BFARR Bacillus farraginis
BFAST Bacillus fastidiosus
BACFIR Bacillus firmus
BFLEX Bacillus flexus
BFORD Bacillus fordii
BFORT Bacillus fortis
BFUMA Bacillus fumarioli
BFUNI Bacillus funiculus
BREVIAGRI*2 Bacillus galactophilus
BGALA Bacillus galactosidilyticus
BGELA Bacillus gelatini
BGIBS Bacillus gibsonii
BGINS Bacillus ginsengi
BGORN Bacillus gornadae
BHALM Bacillus halmapalus
BHALDF Bacillus halodenitrificans
BHALDR Bacillus halodurans
BHORI Bacillus horikoshii
BHORT Bacillus horti
BHUMI Bacillus humi
BHWAJ Bacillus hwajinpoensis
BIDRI Bacillus idriensis
BINDI Bacillus indicus
BINFA Bacillus infantis
BINFE Bacillus infernus
BJEOT Bacillus jeotgali
BKAUS Bacillus kaustophilus
BKORL Bacillus korlensis
BKRUL Bacillus krulwichiae
BLAEV*1 Bacillus laevolacticus
PAELARV*1 Bacillus larvae
BRELAT*1 Bacillus laterosporus
PAELENT*1 Bacillus lentimorbus
BACLEN Bacillus lentus
BACLIC Bacillus licheniformis
BLUCI Bacillus luciferensis
PAEMAC*2 Bacillus macerans
BMACR Bacillus macroides
BMACY Bacillus macyae
BMARN Bacillus marinus
BMARS Bacillus marisflavi
BMASS Bacillus massiliensis
BACMEG Bacillus megaterium
BMETH Bacillus methanolicus
BMOJA Bacillus mojavensis
BMUCI Bacillus mucilaginosus
BMURA Bacillus muralis
BMYCO Bacillus mycoides
BNAGA Bacillus naganoensis
BNEAL Bacillus nealsonii
BNIAC Bacillus niacini
BNOVA Bacillus novalis
BODYS Bacillus odysseyi
BOKUH Bacillus okuhidensis
BOLER Bacillus oleronius
PAEPABU*1 Bacillus pabuli
BPALL Bacillus pallidus
VIRPAN*1 Bacillus pantothenticus
BREVIPARA*1 Bacillus parabrevis
BPAST Bacillus pasteurii
BPATA Bacillus patagoniensis
BPOCH Bacillus pocheonensis
PAEPOL*2 Bacillus polymyxa
PAEPOPI*1 Bacillus popilliae
BPSDL Bacillus pseudalcaliphilus
BPSDF Bacillus pseudofirmus
BPSMY Bacillus pseudomycoides
BPSYP Bacillus psychrophilus
BPSYS Bacillus psychrosaccharolyticus
BPULV Bacillus pulvifaciens
BACPUM Bacillus pumilus
RUMMPYCN*1 Bacillus pycnus
BSALE Bacillus salexigens
BSALI Bacillus saliphilus
BSELE Bacillus selenitireducens
BSHAC Bacillus shackletonii
BSILV*1 Bacillus silvestris
BSIMP Bacillus simplex
BSIRA Bacillus siralis
BACSM Bacillus smithii
BSOLI Bacillus soli
BSONO Bacillus sonorensis
BSPOR Bacillus sporothermodurans
BSUBT Bacillus subterraneus
BSU Bacillus subtilis
BACSUG Bacillus subtilis group
BSIN Bacillus subtilis inaquosorum
BSSP Bacillus subtilis spizizenii
BSS Bacillus subtilis subtilis
BTEQU Bacillus tequilensis
BTHMN Bacillus thermantarcticus
BTHMM Bacillus thermoamylovorans
BTHMC Bacillus thermocatenulatus
BTHMCL Bacillus thermocloacae
GEOBTHER*1 Bacillus thermodenitrificans
BTHMG Bacillus thermoglucosidasius
PAETHIA*1 Bacillus thiaminolyticus
BACTHU Bacillus thuringiensis
BTUSC Bacillus tusciae
PAEVALI*2 Bacillus validus
BVALL Bacillus vallismortis
BVEDD Bacillus vedderi
BVELE Bacillus velezensis
BVIET Bacillus vietnamensis
CHRVI*1 Bacillus violaceus
BVIRE Bacillus vireti
BWEIH Bacillus weihenstephanensis
BACNANT Bacillus, not B. anthracis
CORMA*1 Bacterionema matruchotii
BAS Bacteroides
PREBI*1 Bacteroides bivius
PREBC*2 Bacteroides buccae
PREBU*1 Bacteroides buccalis
BACCC Bacteroides caccae
PSEFCAPI*1 Bacteroides capillosus
PREBC*3 Bacteroides capillus
CLOCL*1 Bacteroides clostridiiformis
BACCG Bacteroides coagulans
PRECO*1 Bacteroides corporis
PREDE*1 Bacteroides denticola
PREDI*1 Bacteroides disiens
BACDT*1 Bacteroides distasonis
BACEG Bacteroides eggerthii
POREN*1 Bacteroides endodontalis
BF Bacteroides fragilis
BFG Bacteroides fragilis group
ANRFU*1 Bacteroides furcosus
PORGI*1 Bacteroides gingivalis
PARAGOLD*1 Bacteroides goldsteinii
CAMGR*1 Bacteroides gracilis
PREHE*1 Bacteroides heparinolyticus
MEGAHYPE*2 Bacteroides hypermegas
PREIN*1 Bacteroides intermedius
PORLE*1 Bacteroides levii
PORSA*1 Bacteroides macacae
BACMASS Bacteroides massiliensis
PREM*1 Bacteroides melaninogenicus
BACMR*1 Bacteroides merdae
MITML*2 Bacteroides multiacidus
DICNO*1 Bacteroides nodosus
BACNORD Bacteroides nordii
CAPOC*1 Bacteroides ochraceus
PREOR*1 Bacteroides oralis
PREOS*1 Bacteroides oris
PREOU*1 Bacteroides oulorum
BACOV Bacteroides ovatus
PREBC*1 Bacteroides pentosaceus
TISPR*1 Bacteroides praeacutus
BACPU*1 Bacteroides putredinis
BACPYOG Bacteroides pyogenes
PRERU*1 Bacteroides ruminicola
PORSA*2 Bacteroides salivosus
BACSP*1 Bacteroides splanchnicus
BACST Bacteroides stercoris
BACPYOG*1 Bacteroides suis
BACPYOG*2 Bacteroides tectus
BACTH Bacteroides thetaiotaomicron
BACUN Bacteroides uniformis
CAMUREO*1 Bacteroides ureolyticus
PREVE*1 Bacteroides veroralis
BACVU Bacteroides vulgatus
PREZO Bacteroides zoogleoformans
BALAN Balantidium
BALNSP Balneatrix
BALNALPI Balneatrix alpica
BARSP Bartonella
BARBA Bartonella bacilliformis
BARCLAR Bartonella clarridgeiae
BARELIZ Bartonella elizabethae
BARHEN Bartonella henselae
BARQUI Bartonella quintana
BARVIN Bartonella vinsonii
BASID Basidiobolus
BASIDRAN*1 Basidiobolus haptosporus
BASIDRAN*2 Basidiobolus heterosporus
BASIDRAN*3 Basidiobolus meristosporus
BASIDRAN Basidiobolus ranarum
BEAUV Beauveria
BEAUVBAS Beauveria bassiana
VIBAL*2 Beneckea alginolytica
VIBHAR*1 Beneckea harveyi
VIBPA*2 Beneckea parahaemolytica
VIBVU*1 Beneckea vulnifica
BERSP Bergeyella
BERZOO Bergeyella zoohelcum
BS Beta-hemolytic streptococcus
STRABH Beta-hemolytic Streptococcus, group A
SNABBH Beta-hemolytic streptococcus, non-Group A, non-Group B
BIFSP Bifidobacterium
BIFADOL Bifidobacterium adolescentis
BIFANGU Bifidobacterium angulatum
BIFDE*1 Bifidobacterium appendicitis
BIFBI Bifidobacterium bifidum
BIFBR Bifidobacterium breve
BIFCATE Bifidobacterium catenulatum
BIFDE Bifidobacterium dentium
BIFDE*2 Bifidobacterium ericksonii
BIFGALL Bifidobacterium gallicum
BIFINF Bifidobacterium infantis
BIFLO Bifidobacterium longum
BIFPSEU Bifidobacterium pseudocatenulatum
BIFSCAR Bifidobacterium scardovii
BIFLO*1 Bifidobacterium suis
BILSP Bilophila
BILWA Bilophila wadsworthia
BIPOSP Bipolaris
BIPOAUST Bipolaris australiensis
BIPOHAWA Bipolaris hawaiiense
BIPOHAWA*1 Bipolaris hawaiiensis
BIPOSPIC Bipolaris spicifera
BK BK Polyomavirus
BLASSP Blastoschizomyces
BLAUSP Blautia
BLAUCOCC Blautia coccoides
RUMHAN Blautia hansenii
BLAUPROD Blautia producta
BOCA Bocavirus
LICE*1 Body lice
BORSP Bordetella
BORAVI Bordetella avium
BORBR Bordetella bronchiseptica
BORHINZ Bordetella hinzii
BORHOLM Bordetella holmesii
BORPA Bordetella parapertussis
BORPE Bordetella pertussis
BORPETR Bordetella petrii
BORTREM Bordetella trematum
BOSP Borrelia
BOAFZE Borrelia afzelii
BOANSE Borrelia anserina
BOBU Borrelia burgdorferi
BOCAUC Borrelia caucasica
BOCORI Borrelia coriaceae
BOCROC Borrelia crocidurae
BODUTT*1 Borrelia duttoni
BODUTT Borrelia duttonii
BOGA Borrelia garinii
BOHE Borrelia hermsii
BOHISP Borrelia hispanica
BOJAPO Borrelia japonica
BOLUSI Borrelia lusitaniae
BOMAZZ Borrelia mazzottii
BOMIYA Borrelia miyamotoi
BORE*2 Borrelia novyi
BORE*1 Borrelia obermyeri
BOPA Borrelia parkeri
BORE Borrelia recurrentis
BOTANU Borrelia tanukii
BOTHEI Borrelia theileri
BOTU Borrelia turicatae
BOVALA Borrelia valaisiana
BOVENE Borrelia venezuelensis
LASISP*1 Botryodiplodia
LASITHEO*1 Botryodiplodia theobromae
BRACHSP Brachybacterium
BRACHMURI Brachybacterium muris
BIPOSPIC*1 Brachycladium spiciferum
BRACSP Brachyspira
BRACAALB Brachyspira aalborgi
BRACPILO Brachyspira pilosicoli
MORCA*1 Branhamella catarrhalis
MORCUNI*2 Branhamella cuniculi
MOROVIS*1 Branhamella ovis
BREVISP Brevibacillus
BREVIAGRI Brevibacillus agri
BREBRE Brevibacillus brevis
BREVICENT Brevibacillus centrosporus
BRELAT Brevibacillus laterosporus
BREVIPARA Brevibacillus parabrevis
BRVSP Brevibacterium
CURTOALBI*1 Brevibacterium albidum
CORAMM*1 Brevibacterium ammoniagenes
BRVCAS Brevibacterium casei
BRVEPI Brevibacterium epidermidis
MICRIMPE*2 Brevibacterium imperiale
BRVLINE Brevibacterium linens
BRVLUTE Brevibacterium luteolum
BRVMCBR Brevibacterium mcbrellneri
MICROXYD*1 Brevibacterium oxydans
BRVBRAVE Brevibacterium ravenspurgense
BRVSANG Brevibacterium sanguinis
CORVIT*1 Brevibacterium vitarumen
BREVUSP Brevundimonas
BREDIM Brevundimonas diminuta
BREVES Brevundimonas vesicularis
BRSP Brucella
BRAB Brucella abortus
BRCA Brucella canis
BRME Brucella melitensis
BRNEOT Brucella neotomae
BROVIS Brucella ovis
BRSU Brucella suis
BUDSP Budvicia
BUDAQ Budvicia aquatica
BULLSP Bulleidia
BULLEXTR Bulleidia extructa
BUNYA Bunyaviridae
BURSP Burkholderia
BURAMBI Burkholderia ambifaria
BURANTH Burkholderia anthina
BURARBO Burkholderia arboris
BURCENO Burkholderia cenocepacia
BURCE Burkholderia cepacia
BURCEPCOM Burkholderia cepacia complex
BURGL*5 Burkholderia cocovenenans
BURCONT Burkholderia contaminans
BURDIFF Burkholderia diffusa
BURDOLO Burkholderia dolosa
BURFUNG*1 Burkholderia fungorum
BURGL Burkholderia gladioli
BURLATA Burkholderia lata
BURLATE Burkholderia latens
BURMA Burkholderia mallei
BURMETA Burkholderia metallica
BURMULT Burkholderia multivorans
RALPIC*1 Burkholderia pickettii
BURPM Burkholderia pseudomallei
BURPYRR Burkholderia pyrrocinia
BURSTAB Burkholderia stabilis
BURTHAI Burkholderia thailandensis
BURUBON Burkholderia ubonensis
BURVIET Burkholderia vietnamiensis
BUTSP Buttiauxella
BUTAG Buttiauxella agrestis
BUTBREN Buttiauxella brennerae
BUTFERR Buttiauxella ferragutiae
BUTGAVI Buttiauxella gaviniae
BUTIZAR Buttiauxella izardii
BUTNO Buttiauxella noackiae
BUTWARM Buttiauxella warmboldiae
EUBLI*1 Butyribacterium rettgeri
BUTYRSP Butyricimonas
BUTYRVIRO Butyricimonas virosa
BUTYSP Butyrivibrio
BUTYFIBR Butyrivibrio fibrisolvens
BUTYHUNG Butyrivibrio hungatei
CALIV Calicivirus
CALENC California encephalitis virus
CALSP Calymmatobacterium
KLEGRA*1 Calymmatobacterium granulomatis
CAMSP Campylobacter
ACOBUTZ*1 Campylobacter butzleri
HELCI*1 Campylobacter cinaedi
CAMCL Campylobacter coli
CAMCO Campylobacter concisus
CAMCU Campylobacter curvus
HELFE*1 Campylobacter fennelliae
CAMFU Campylobacter fetus
CAMFF Campylobacter fetus fetus
CAMJE*1 Campylobacter fetus jejuni
CAMFV Campylobacter fetus venerealis
CAMGR Campylobacter gracilis
CAMHELV Campylobacter helveticus
CAMHOMI Campylobacter hominis
CAMHY Campylobacter hyointestinalis
CAMINSU Campylobacter insulaenigrae
CAMJE Campylobacter jejuni
CAMJD Campylobacter jejuni doylei
CAMJJ Campylobacter jejuni jejuni
CAMLANI Campylobacter lanienae
CAMLA Campylobacter lari
CAMLA*1 Campylobacter laridis
CAMSM Campylobacter mucosalis
HELMU*2 Campylobacter mustelae
ACONI*1 Campylobacter nitrofigilis
HELPY*1 Campylobacter pylori
CAMRE Campylobacter rectus
CAMSHOW Campylobacter showae
CAMSPUT Campylobacter sputorum
CAMSB Campylobacter sputorum bubulus
CAMSM*1 Campylobacter sputorum mucosalis
CAMSS Campylobacter sputorum sputorum
CAMUPSA Campylobacter upsaliensis
CAMUREO Campylobacter ureolyticus
CAS Candida
CA Candida albicans
CANST*1 Candida albicans var stellatoidea
CAAUR Candida auris
CANBRAC Candida bracarensis
CANCAT*2 Candida brumptii
CANCAT Candida catenulata
CANCIF Candida ciferrii
CANDUB Candida dubliniensis
CANDUOB Candida duobushaemulonii
CYBEFABI*1 Candida fabianii
CANFAM*1 Candida famata
CG Candida glabrata
CANGU Candida guilliermondii
CANGUI Candida guilliermondii var membranaefaciens
CANHAE Candida haemulonii
CANINC Candida inconspicua
CANINT Candida intermedia
CANKEF Candida kefyr
CK Candida krusei
CANLAM Candida lambica
CANLIP Candida lipolytica
CANLU Candida lusitaniae
CANMETA Candida metapsilosis
CANNIVA Candida nivariensis
CANNOR Candida norvegensis
CANLU*2 Candida obtusa
CANORTH Candida orthopsilosis
CP Candida parapsilosis
CANPARACOM Candida parapsilosis complex
CANLU*1 Candida parapsilosis var obtusa
CANPARA Candida pararugosa
CANPEL Candida pelliculosa
CANPIN Candida pintolopesii
CANPUL Candida pulcherrima
CANCAT*1 Candida ravautii
CANRUG Candida rugosa
CANSAKE Candida sake
CANPIN*2 Candida slooffii
CANST Candida stellatoidea
CANDSTEL Candida stellimalicola
CT Candida tropicalis
CANUTI Candida utilis
CANVIN Candida vini
CANVIS Candida viswanathii
CANZEY Candida zeylanoides
CAPSP Capnocytophaga
CAPCA Capnocytophaga canimorsus
CAPCYNO Capnocytophaga cynodegmi
CAPGI Capnocytophaga gingivalis
CAPGRAN Capnocytophaga granulosa
CAPHEMO Capnocytophaga haemolytica
CAPOC Capnocytophaga ochracea
CAPST Capnocytophaga sputigena
ACS*2 carbapenem resistant Acinetobacter
ENC*4 carbapenem resistant Enterobacter cloacae
KP*3 carbapenem resistant Klebsiella pneumoniae
CARSP Cardiobacterium
CARHO Cardiobacterium hominis
CARVALV Cardiobacterium valvarum
CATABSP Catabacter
CATABHONG Catabacter hongkongensis
CATESP Catenibacterium
CATEMITS Catenibacterium mitsuokai
CATOSP Catonella
CATOMORB Catonella morbi
CEDSP Cedecea
CEDDA Cedecea davisae
CEDLA Cedecea lapagei
CEDNE Cedecea neteri
CELLSP Cellulomonas
CELLUCELL*1 Cellulomonas cellulans
CELLHOMI Cellulomonas hominis
CELLHUMI Cellulomonas humilata
CELLUSP Cellulosimicrobium
CELLUCELL Cellulosimicrobium cellulans
CENSP Centipeda
CENPE Centipeda periodontii
ACRE*1 Cephalosporium
ACREKILI*1 Cephalosporium kiliense
ACREPOTR*2 Cephalosporium potronii
ACRERECI*1 Cephalosporium recifei
ACRESTRI*1 Cephalosporium strictum
CHAESP Chaetomium
CHAEATRO Chaetomium atrobrunneum
CHAEGLOB Chaetomium globosum
CHIKVI Chikungunya virus
CHILSP Chilomastix
CHILMESN Chilomastix mesnili
CHLSP Chlamydia
CHLPN*1 Chlamydia pneumoniae
CHLPS*3 Chlamydia psittaci
CHLTR Chlamydia trachomatis
CHLASP Chlamydophila
CHLAABOR Chlamydophila abortus
CHLPN Chlamydophila pneumoniae
CHLPS Chlamydophila psittaci
CHRSP Chromobacterium
CHRVI*2 Chromobacterium janthinum
CHRVI Chromobacterium violaceum
CHRYS Chryseobacterium
CHRGLE Chryseobacterium gleum
CHRIND Chryseobacterium indologenes
CHSSP Chryseomonas
CHSLU Chryseomonas luteola
CHSLU*2 Chryseomonas polytricha
CHRYSP Chrysosporium
CS Citrobacter
CITAM Citrobacter amalonaticus
CITBRA Citrobacter braakii
CITKO*1 Citrobacter diversus
CITA1 Citrobacter farmeri
CF Citrobacter freundii
CITGILL Citrobacter gillenii
CITKO Citrobacter koseri
CITMURL Citrobacter murliniae
CITRODE Citrobacter rodentium
CITSED Citrobacter sedlakii
CITWER Citrobacter werkmanii
CITYOU Citrobacter youngae
CLADSP Cladophialophora
CLADBANT Cladophialophora bantiana
CLADO Cladosporium
CLADOCLAD Cladosporium cladosporioides
CLADOHERB Cladosporium herbarum
CLADOSPHA Cladosporium sphaerospermum
EXOPWERN*1 Cladosporium werneckii
CLAVSP Clavispora
CLAVLUSI Clavispora lusitaniae
CLOSTRSP Clostridioides
CD Clostridioides difficile
CLS Clostridium
CLOSAR*1 Clostridium absonum
CLOAR Clostridium argentinense
CLOBA*3 Clostridium barati
CLOBA Clostridium baratii
EUBBARK*1 Clostridium barkeri
CLOBART Clostridium bartlettii
CLOBEIJ Clostridium beijerinckii
CLOBI Clostridium bifermentans
CLOBOLT Clostridium bolteae
CLOBO Clostridium botulinum
CLOBU Clostridium butyricum
CLOCA Clostridium cadaveris
CLOCN Clostridium carnis
CLOCELE Clostridium celerecrescens
CLOCL Clostridium clostridioforme
CLOCO Clostridium cochlearium
CLOCOCL Clostridium cocleatum
CD*2 Clostridium difficile
CLODISP Clostridium disporicum
CLOFA Clostridium fallax
CLOGH*1 Clostridium ghoni
CLOGH Clostridium ghonii
CLOGL Clostridium glycolicum
CLOHA Clostridium haemolyticum
CLOHT Clostridium hastiforme
CLOHATH Clostridium hathewayi
CLOHI Clostridium histolyticum
CLOID Clostridium indolis
CLOIN Clostridium innocuum
CLOINTE Clostridium intestinale
CLOIR Clostridium irregulare
CLOIR*1 Clostridium irregularis
CLOCO*1 Clostridium lentoputrescens
CLOLEPT Clostridium leptum
CLOLI Clostridium limosum
CLOMA Clostridium malenominatum
CLONOVY Clostridium novyi
FLAVPLAU*1 Clostridium orbiscindens
CLOOR Clostridium oroticum
CLOBA*1 Clostridium paraperfringens
CLOPU Clostridium paraputrificum
CLOBA*2 Clostridium perenne
CLP Clostridium perfringens
CLOFA*1 Clostridium pseudofallax
CLOBU*1 Clostridium pseudotetanicum
CLOPS Clostridium putrefaciens
CLORA Clostridium ramosum
CLOSAR Clostridium sardiniense
CLOSE Clostridium septicum
CLOSO Clostridium sordellii
CLOSH Clostridium sphenoides
CLOSPIR Clostridium spiroforme
CLOSP Clostridium sporogenes
CLOSPOR Clostridium sporosphaeroides
CLOSU Clostridium subterminale
CLOSY Clostridium symbiosum
CLOTE Clostridium tertium
CLOTT Clostridium tetani
FILVIL*1 Clostridium villosum
CLONPERF Clostridium, not C. perfringens
COKESP Cokeromyces
COKERECU Cokeromyces recurvatus
COSP Coliform bacteria
COLLSP Collinsella
COLAER Collinsella aerofaciens
COLLINTE Collinsella intestinalis
COLLSTER Collinsella stercoris
REOCT Colorado tick fever virus
COMSP Comamonas
DELFAC*1 Comamonas acidovorans
COMAQUA Comamonas aquatica
COMKERS Comamonas kerstersii
COMTR Comamonas terrigena
COMTE Comamonas testosteroni
CONID Conidiobolus
CONIDCOR Conidiobolus coronatus
CONIDINC Conidiobolus incongruus
CONISP Coniothyrium
POXOR*3 Contagious ecthyma virus
POXOR*1 Contagious pustular dermatitis virus
COPRSP Coprococcus
COPREUTA Coprococcus eutactus
CORGN Corynebacterium
CORACC Corynebacterium accolens
CORA Corynebacterium afermentans
CORAA Corynebacterium afermentans afermentans
CORAL Corynebacterium afermentans lipophilum
CORAMM Corynebacterium ammoniagenes
CORAMY Corynebacterium amycolatum
CORAPP Corynebacterium appendicis
CORAQL Corynebacterium aquilae
CORARG Corynebacterium argentoratense
CORATY Corynebacterium atypicum
CORAR Corynebacterium aurimucosum
CORARS Corynebacterium auris
CORARSC Corynebacterium auriscanis
CORBET Corynebacterium beticola
CORBO Corynebacterium bovis
CORCAL Corynebacterium callunae
CORCAM Corynebacterium camporealensis
CORCAP Corynebacterium capitovis
CORCAS Corynebacterium casei
CORCSP Corynebacterium caspium
CORCIC Corynebacterium ciconiae
CORCON Corynebacterium confusum
CORCOY Corynebacterium coyleae
CORCY Corynebacterium cystitidis
CORDI Corynebacterium diphtheriae
CORDUR Corynebacterium durum
COREFF Corynebacterium efficiens
RHOEQ*2 Corynebacterium equi
CORFAL Corynebacterium falsenii
RHOFASC*2 Corynebacterium fascians
CORFEL Corynebacterium felinum
CORFVS Corynebacterium flavescens
CORST*1 Corynebacterium flavidum
CORFRE Corynebacterium freneyi
CORGEN Corynebacterium genitalium
CORGLA Corynebacterium glaucum
CORGLU Corynebacterium glucuronolyticum
CORGL Corynebacterium glutamicum
CORHAL Corynebacterium halotolerans
ARCHA*1 Corynebacterium hemolyticum
CORHOA Corynebacterium hoagii
CORPD*1 Corynebacterium hofmannii
CORIMI Corynebacterium imitans
CORJK Corynebacterium jeikeium
CORKRO Corynebacterium kroppenstedtii
CORKU Corynebacterium kutscheri
CORGL*1 Corynebacterium lilium
CORLIP Corynebacterium lipophiloflavum
CORMAC Corynebacterium macginleyi
CORMAN Corynebacterium manihot
CORMSL Corynebacterium massiliense
CORMST Corynebacterium mastitidis
CORMA Corynebacterium matruchotii
CORMED Corynebacterium mediolanum
CORMI Corynebacterium minutissimum
CORVAR*1 Corynebacterium mooreparkense
CORMUC Corynebacterium mucifaciens
CORMRS Corynebacterium murisepticum
CORKU*1 Corynebacterium murium
CORMY Corynebacterium mycetoides
CORNEP Corynebacterium nephridii
CORAR*1 Corynebacterium nigricans
CORPS*1 Corynebacterium ovis
TSUKPAUR*2 Corynebacterium paurometabolum
CORPHO Corynebacterium phocae
CORPI Corynebacterium pilosum
CORPRO Corynebacterium propinquum
CORPD Corynebacterium pseudodiphtheriticum
CORPST Corynebacterium pseudogenitalium
CORPS Corynebacterium pseudotuberculosis
CORPSM Corynebacterium pseudotuberculostearicum
ARCPY*2 Corynebacterium pyogenes
CORPYRU Corynebacterium pyruviciproducens
CORRE Corynebacterium renale
CORRES Corynebacterium resistens
CORRIE Corynebacterium riegelii
CORRUB Corynebacterium rubrum
CORGLU*1 Corynebacterium seminale
CORSIM Corynebacterium simulans
CORSIN Corynebacterium singulare
CORSPI Corynebacterium sphenisci
CORSPM Corynebacterium spheniscorum
CORST Corynebacterium striatum
CORSUI Corynebacterium suicordis
CORSUN Corynebacterium sundsvallense
CORTEN Corynebacterium tenuis
CORTER Corynebacterium terpenotabidum
CORTES Corynebacterium testudinoris
CORTHO Corynebacterium thomssenii
CORTUB Corynebacterium tuberculostearicum
CORTUSC Corynebacterium tuscaniense
CORUL Corynebacterium ulcerans
CORUR Corynebacterium urealyticum
CORURE Corynebacterium ureicelerivorans
CORVAR Corynebacterium variabile
CORVAR*3 Corynebacterium variabilis
CORVIS Corynebacterium viscosum
CORVIT Corynebacterium vitaeruminis
CORVIT*2 Corynebacterium vitarumen
CORVIT*3 Corynebacterium vitaruminis
CORXE Corynebacterium xerosis
CORNCD Corynebacterium, not C. diphtheriae
CORNCJ Corynebacterium, not C. jeikeium
CORTOX Corynebacterium, toxigenic
CORGPB coryneform gram positive bacilli
CXLSU Coxiella
CXLBU Coxiella burnetii
CJD Creutzfeldt-Jakob agent
BUNCC Crimean-Congo hemorrhagic fever virus
CROSP Cronobacter
CRODUB Cronobacter dublinensis
CROMAL Cronobacter malonaticus
CROMUY Cronobacter muytjensii
CROSAK Cronobacter sakazakii
CROTUR Cronobacter turicensis
CRYPSP Cryptobacterium
CRYPCURT Cryptobacterium curtum
CANPARA*1 Cryptococcus aggregatus
CANUTI*1 Cryptococcus utilis
CSPOR Cryptosporidium
CSPORHOM Cryptosporidium hominis
CSPORPAR Cryptosporidium parvum
CUNNSP Cunninghamella
CUNNBERT Cunninghamella bertholletiae
CUPRSP Cupriavidus
CUPRBASI Cupriavidus basilensis
CUPRGILA Cupriavidus gilardii
CUPRMETA Cupriavidus metallidurans
CUPRNECA Cupriavidus necator
CUPRPAUC Cupriavidus pauculus
CUPRRESP Cupriavidus respiraculi
CURTOSP Curtobacterium
CURTOALBI Curtobacterium albidum
CURVA Curvularia
CURVAGEN Curvularia geniculata
CURVALUN Curvularia lunata
BIPOSPIC*2 Curvularia speciferum
BIPOSPIC*3 Curvularia spicifera
CUTISP Cutibacterium
PRPAC Cutibacterium acnes
CYBEFABI Cyberlindnera fabianii
CYCLSP Cyclospora
CYCLCAYE Cyclospora cayetanensis
CYSTI Cysticercus
PEDOHEPA*3 Cytophaga heparina
OCHRCONS*1 Dactylaria constricta
OCHRGALL*2 Dactylaria constricta var gallopava
DEBASP Debaryomyces
CANFAM Debaryomyces hansenii
PICPOL*2 Debaryomyces polymorphus
DEINOSP Deinococcus
DELFSP Delftia
DELFAC Delftia acidovorans
HEPD*1 Delta hepatitis viral agent
DENGE Dengue virus
DERMASP Dermabacter
DERMAHOM Dermabacter hominis
DERMSP Dermacoccus
DENISH Dermacoccus nishinomiyaensis
DERMATSP Dermatophilus
DERMATCON Dermatophilus congolensis
DERMATCON*1 Dermatophilus pedis
DSMSP Desulfomonas
DSVSP Desulfovibrio
DSVDE Desulfovibrio desulfuricans
DSVPIG Desulfovibrio piger
DSVVUL Desulfovibrio vulgaris
DIALSP Dialister
DIALMICR Dialister micraerophilus
DIALPNEU Dialister pneumosintes
DIBOT*1 Dibothriocephalus
DICSP Dichelobacter
DICNO Dichelobacter nodosus
DIENSP Dientamoeba
DIENFRAG Dientamoeba fragilis
DIETSP Dietzia
DIETCINN Dietzia cinnamea
DIPTH Diphtheroids
DIPTHAE Diphtheroids, aerobic
DIPTHAN Diphtheroids, anaerobic
DIBOT Diphyllobothrium
DIPYL Dipylidium
DOLOSP Dolosicoccus
DOLOPAUC Dolosicoccus paucivorans
DOLOSSP Dolosigranulum
DOLOPIGR Dolosigranulum pigrum
DORESP Dorea
DOREFORM Dorea formicigenerans
DORELONG Dorea longicatena
DRECH Drechslera
BIPOAUST*1 Drechslera australiensis
EXSEROST*4 Drechslera halodes
BIPOHAWA*2 Drechslera hawaiiensis
EXSEROST*1 Drechslera rostrata
BIPOSPIC*4 Drechslera spicifera
DYELSP Dyella
DYSGSP Dysgonomonas
DYSGCAPN Dysgonomonas capnocytophagoides
DYSGGADE Dysgonomonas gadei
EEE Eastern equine encephalitis virus
EBOLA Ebolavirus
ECHIN Echinococcus
MEASL*2 Edmonston virus
EDWSP Edwardsiella
EDWTR*1 Edwardsiella anguillimortifera
EDWHO Edwardsiella hoshinae
EDWIC Edwardsiella ictaluri
EDWTR Edwardsiella tarda
ASCAR*1 Eelworm
EGGESP Eggerthella
EUBLE Eggerthella lenta
EGGESINE Eggerthella sinesis
EGGERSP Eggerthia
LACCA Eggerthia catenaformis
EHRLSP Ehrlichia
EIKSP Eikenella
EIC Eikenella corrodens
ELIZSP Elizabethkingia
ELIZME Elizabethkingia meningoseptica
CHRYSP*2 Emmonsia
EMPSP Empedobacter
EMPBRE Empedobacter brevis
ENDOSP Endolimax
ENDONANA Endolimax nana
ENTAS Entamoeba
ENTCO Entamoeba coli
ENTADISP Entamoeba dispar
ENTAGING Entamoeba gingivalis
ENTAHART Entamoeba hartmanni
ENTHI Entamoeba histolytica
ENTAHISDIS Entamoeba histolytica/dispar
ENTAPOLE Entamoeba polecki
ESP Enterobacter
EA*1 Enterobacter aerogenes
PANAG*2 Enterobacter agglomerans
PANAG*1 Enterobacter agglomerans group
ENTAU Enterobacter amnigenus
ENTAB Enterobacter asburiae
ENTCAN Enterobacter cancerogenus
ENC Enterobacter cloacae
ENCCX Enterobacter cloacae complex
ENTEDISS Enterobacter cloacae dissolvens
ENTECOWA*1 Enterobacter cowanii
ENTEDISS*2 Enterobacter dissolvens
ENTGE*1 Enterobacter gergoviae
HA*1 Enterobacter hafniae
ENTHO Enterobacter hormaechei
KLUINTE*1 Enterobacter intermedius
ENTEKOBE Enterobacter kobei
SL*1 Enterobacter liquefaciens
ENTELUDW Enterobacter ludwigii
ENTENIMI*2 Enterobacter nimipressuralis
ENTEPYRI*1 Enterobacter pyrinus
ENOT Enterobacteriaceae
ENTER Enterobius
ENTSP Enterococcus
ENTEASIN Enterococcus asini
ENTA Enterococcus avium
ENTECANI Enterococcus canis
ENTCA Enterococcus casseliflavus
ENTECECO Enterococcus cecorum
ENTDI Enterococcus dispar
ENTD Enterococcus durans
ENTFS Enterococcus faecalis
ENTFM Enterococcus faecium
ENTCA*1 Enterococcus flavescens
ENTGA Enterococcus gallinarum
ENTEGILV Enterococcus gilvus
ENTEHAEM Enterococcus haemoperoxidus
ENTEHERM Enterococcus hermanniensis
ENTHR Enterococcus hirae
ENTEITAL Enterococcus italicus
ENTMA Enterococcus malodoratus
ENTEMORA Enterococcus moraviensis
ENTMU Enterococcus mundtii
ENTEPALL Enterococcus pallens
ENTEPHOE Enterococcus phoeniculicola
ENTPS Enterococcus pseudoavium
ENTRA Enterococcus raffinosus
ENTERATT Enterococcus ratti
ENTESACC Enterococcus saccharolyticus
ENTEITAL*1 Enterococcus saccharominimus
LACTGARV*2 Enterococcus seriolicida
TETRSOLI*1 Enterococcus solitarius
ENTESULF Enterococcus sulfureus
ENTEVILL Enterococcus villorum
ENTESP Enterocytozoon
ECO157 Enterohemorrhagic Escherichia coli, serotype O157:H7
ENTERSP Enteromonas
ENTERHOM Enteromonas hominis
ECEP Enteropathogenic Escherichia coli
ENTRO Enterovirus
HEPA*1 Enterovirus type 72
CONID*1 Entomophthora
CONIDCOR*1 Entomophthora coronata
EPICSP Epicoccum
EPIDE Epidermophyton
EBV*1 Epstein-Barr virus
ERWSP Erwinia
PANANAN*1 Erwinia ananas
ENTCAN*2 Erwinia cancerogena
ENTEDISS*1 Erwinia dissolvens
PANAG*3 Erwinia herbicola-Enterobacter agglomerans group
ENTENIMI*1 Erwinia nimipressuralis
ERWPERS Erwinia persicina
PANANAN*2 Erwinia uredovora
ERYSP Erysipelothrix
ERYINOP Erysipelothrix inopinata
ERYRH*1 Erysipelothrix insidiosa
ERYRH Erysipelothrix rhusiopathiae
ERYTONS Erysipelothrix tonsillarum
ESCSP Escherichia
LECAD*1 Escherichia adecarboxylata
ESCALB Escherichia albertii
EC Escherichia coli
ESCFE Escherichia fergusonii
ESCHE Escherichia hermannii
ESCVU Escherichia vulneris
EUBSP Eubacterium
COLAER*1 Eubacterium aerofaciens
PSALA*1 Eubacterium alactolyticum
EUBBARK Eubacterium barkeri
EUBBIFO Eubacterium biforme
EUBBR Eubacterium brachy
EUBBUDA Eubacterium budayi
EUBBUDA*1 Eubacterium cadaveris
EUBCALL Eubacterium callanderi
EUBCM Eubacterium combesii
EUBCN Eubacterium contortum
EUBCYLI Eubacterium cylindroides
EUBDOLI Eubacterium dolichum
EUBELIG Eubacterium eligens
SLACEXIG*1 Eubacterium exiguum
ATOFOSS*1 Eubacterium fossor
EUBHADR Eubacterium hadrum
EUBHALL Eubacterium hallii
EUBINFI Eubacterium infirmum
EUBLE*1 Eubacterium lentum
EUBLI Eubacterium limosum
EUBMINU Eubacterium minutum
EUBMO Eubacterium moniliforme
EUBNI Eubacterium nitrogenes
EUBNO Eubacterium nodatum
FLAVPLAU*2 Eubacterium plautii
EUBRAMU Eubacterium ramulus
EUBRECT Eubacterium rectale
EUBSA Eubacterium saburreum
EUBSAPH Eubacterium saphenum
EUBSIRA Eubacterium siraeum
EUBSUL Eubacterium sulci
EUBTE Eubacterium tenue
MOGTIM*1 Eubacterium timidum
EUBVENT Eubacterium ventriosum
EUBYU Eubacterium yurii
EWISP Ewingella
EWIAM Ewingella americana
EXIGSP Exiguobacterium
EXIGACET Exiguobacterium acetylicum
EXOPSP Exophiala
EXOPBERG Exophiala bergeri
WANGDERM*4 Exophiala dermatitidis
EXOPJEAN Exophiala jeanselmei
EXOPSPIN Exophiala spinifera
EXOPWERN Exophiala werneckii
EXSESP Exserohilum
EXSEROST Exserohilum rostratum
CF*3 Extended spectrum beta-lactamase producing Citrobacter freundii

ENC*5 Extended spectrum beta-lactamase producing Enterobacter cloacae

EC*1 Extended spectrum beta-lactamase producing Escherichia coli

KO*1 Extended spectrum beta-lactamase producing Klebsiella oxytoca

KP*4 Extended spectrum beta-lactamase producing Klebsiella pneumoniae

PM*2 Extended spectrum beta-lactamase producing Proteus mirabilis

SHIGD*2 Extended spectrum beta-lactamase producing Shigella sonnei
FACKSP Facklamia
FACKHOMI Facklamia hominis
FACKIGNA Facklamia ignava
FACKLANG Facklamia languida
FACKSOUR Facklamia sourekii
FACKTABA Facklamia tabacinasalis
FAECSP Faecalibacterium
FAECPRAU Faecalibacterium prausnitzii
MOBMU*1 Falcivibrio grandis
MOBCU*1 Falcivibrio vaginalis
FILISP Filifactor
FILALO Filifactor alocis
FILVIL Filifactor villosus
FINESP Finegoldia
FINMAG Finegoldia magna
SARINK*5 Fissuricella filamenta
PSORY*1 Flavimonas oryzihabitans
FLAVI Flavivirus
FLASP Flavobacterium
MICRARBO*1 Flavobacterium arborescens
CHRIND*3 Flavobacterium aureum
EMPBRE*1 Flavobacterium breve
FLADEVO Flavobacterium devorans
CHRGLE*1 Flavobacterium gleum
PEDOHEPA*2 Flavobacterium heparinum
CHRIND*2 Flavobacterium indologenes
MICRMARI*1 Flavobacterium marinotypicum
MICRMARI*2 Flavobacterium maritypicum
ELIZME*1 Flavobacterium meningosepticum
SPHMI Flavobacterium mitzutaii
SPHMU*2 Flavobacterium multivorum
MYROD*1 Flavobacterium odoratum
SPMPA*1 Flavobacterium paucimobilis
SPHST*1 Flavobacterium spiritivorum
SPHTH*1 Flavobacterium thalpophilum
SPHST*2 Flavobacterium yabuuchiae
FLAVSP Flavonifractor
FLAVPLAU Flavonifractor plautii
FLUOSP Fluoribacter
LEGBOZE*1 Fluoribacter bozemanae
FLDUM*1 Fluoribacter dumoffii
LEGGO*1 Fluoribacter gormanii
FONSE Fonsecaea
FONSECOM Fonsecaea compacta
FONSECOM*1 Fonsecaea compactum
WANGDERM*5 Fonsecaea dermatitidis
FONSEPED Fonsecaea pedrosoi
FRASP Francisella
FRATU Francisella tularensis
FUNG Fungi
FUSAR Fusarium
FUSARCHLA Fusarium chlamydosporum
FUSARCULM Fusarium culmorum
FUSARDIME Fusarium dimerum
FUSARGRAM Fusarium graminearum
FUSARSOLA*1 Fusarium javanicum
FUSARPROL*1 Fusarium moniforme var intermedium
FUSAROXYS Fusarium oxysporum
FUSARPOAE Fusarium poae
FUSARPROL Fusarium proliferatum
FUSARGRAM*1 Fusarium roseum
FUSARSEMI Fusarium semitectum
FUSARSOLA Fusarium solani
FUSARSPOR Fusarium sporotrichioides
FUSARTRIC*1 Fusarium tricinctum
FUSARTRIC Fusarium tricintum
FUSARVERT Fusarium verticillioides
NEOSDIMI*1 Fusicoccum dimidiatum
FSU Fusobacterium
FILALO*1 Fusobacterium alocis
FUSCANI Fusobacterium canifelinum
FUSEQUI Fusobacterium equinum
FUSGO Fusobacterium gonidiaformans
FUSMO Fusobacterium mortiferum
FUSNA Fusobacterium naviforme
FUSNC Fusobacterium necrogenes
FUSNE Fusobacterium necrophorum
FUSND Fusobacterium necrophorum fundiliforme
FUSNN Fusobacterium necrophorum necrophorum
FUSNU Fusobacterium nucleatum
FUSNS Fusobacterium nucleatum fusiforme
FUSNL Fusobacterium nucleatum nucleatum
FUSNP Fusobacterium nucleatum polymorphum
FUSPE Fusobacterium periodonticum
FLAVPLAU*3 Fusobacterium plauti
FUSNP*1 Fusobacterium polymorphum
FAECPRAU*1 Fusobacterium prausnitzii
FUSRU Fusobacterium russii
EUBSUL*1 Fusobacterium sulci
FUSUL Fusobacterium ulcerans
FUSVA Fusobacterium varium
GALLSP Gallicola
GALLBARN Gallicola barnesae
GS Gamma (non)-hemolytic streptococcus
GARSP Gardnerella
GV Gardnerella vaginalis
GEMSP Gemella
GEMBERG Gemella bergeriae
GEMHA Gemella haemolysans
GEMMO Gemella morbillorum
GEMSANG Gemella sanguinis
GEOBSP Geobacillus
GEOBSTEA Geobacillus stearothermophilus
GEOBTHER Geobacillus thermodenitrificans
GEOBTHERM Geobacillus thermoglucosidasius
GEOTR Geotrichum
GEOCAN Geotrichum candidum
GEOTRKLEB Geotrichum klebahnii
GEOTRKLEB*1 Geotrichum penicillatum
RUBEL*1 German measles virus
GIARD Giardia
GIARDLAMB*2 Giardia duodenalis
GIARDLAMB*1 Giardia intestinalis
GIARDLAMB Giardia lamblia
CHRYSP*3 Glenosporella
GLIOSP Gliocladium
GLOBSP Globicatella
GLOBSANG Globicatella sanguinis
GLOBSULF Globicatella sulfidifaciens
GORDSP Gordonia
GORDBRON Gordonia bronchialis
GORDOTIT Gordonia otitidis
GORDPOLY Gordonia polyisoprenivorans
GORDRUBR Gordonia rubripertincta
GORDRUBR*1 Gordonia rubropertinctus
GORDSPUT Gordonia sputi
GORDTERR Gordonia terrae
GNR Gram-negative bacillus
GNRF Gram-negative bacillus, fermentative
GNRNF Gram-negative bacillus, non-fermentative
GNCB Gram-negative coccobacillus
GNC Gram-negative coccus
GNDC Gram-negative diplococcus
GNPB Gram-negative pleomorphic bacillus
GPR Gram-positive bacillus
GPCB Gram-positive coccobacillus
GPC Gram-positive coccus
GPDC Gram-positive diplococcus
GVR Gram-variable bacillus
GVCB Gram-variable coccobacillus
GVC Gram-variable coccus
GRANSP Granulicatella
GRADJ Granulicatella adiacens
GRANELEG Granulicatella elegans
GRAPSP Graphium
GRIMSP Grimontia
GRIMHOLL Grimontia hollisae
HS Haemophilus
HAEACT*2 Haemophilus actinomycetemcomitans
HAEAEGY Haemophilus aegyptius
HAEAP*1 Haemophilus aphrophilus
HAEHAEM*1 Haemophilus canis
HAEDU Haemophilus ducreyi
HAEHAEM Haemophilus haemoglobinophilus
HAEHA Haemophilus haemolyticus
HIU Haemophilus influenzae
HAEPAH Haemophilus parahaemolyticus
HP Haemophilus parainfluenzae
HAEPITT Haemophilus pittmaniae
AGGRSEGN*1 Haemophilus segnis
HAFSP Hafnia
HA Hafnia alvei
HALOSP Halomonas
HALOVENU Halomonas venusta
PICANGU*2 Hansenula angusta
PICANA*1 Hansenula anomala
CYBEFABI*2 Hansenula fabianii
OGATPOLY*1 Hansenula polymorpha
HARTSP Hartmannella
HELCSP Helcococcus
HELCKUNZ Helcococcus kunzii
HELCSUEC Helcococcus sueciensis
HELSP Helicobacter
HELACIN Helicobacter acinonychis
HELACIN*1 Helicobacter acinonyx
HELAURA Helicobacter aurati
HELBILI Helicobacter bilis
HELBIZZ Helicobacter bizzozeroni
HELCANA Helicobacter canadensis
HELCANI Helicobacter canis
HELCHOL Helicobacter cholecystus
HELCI Helicobacter cinaedi
HELFELI Helicobacter felis
HELFE Helicobacter fennelliae
HELGANM Helicobacter ganmani
HELHEPA Helicobacter hepaticus
HELMESO Helicobacter mesocricetorum
HELMURI Helicobacter muridarum
HELMU Helicobacter mustelae
HELPY*2 Helicobacter nemestrinae
HELPAME Helicobacter pametensis
HELPULL Helicobacter pullorum
HELPY Helicobacter pylori
HELRA Helicobacter rappini
HELRODE Helicobacter rodentium
HELSALO Helicobacter salomonis
HELTROG Helicobacter trogontum
HELTYPH Helicobacter typhlonius
HELMSP Helminthosporium
BIPOAUST*2 Helminthosporium australiensis
EXSEROST*3 Helminthosporium halodes
BIPOHAWA*3 Helminthosporium hawaiiensis
EXSEROST*2 Helminthosporium rostratum
BIPOSPIC*5 Helminthosporium spiciferum
BORPE*1 Hemophilus pertussis
HEPA Hepatitis A virus
HB Hepatitis B virus
HEPC Hepatitis C virus
HEPD Hepatitis D virus
HEPE Hepatitis E virus
HEPG Hepatitis G virus
HERBSP Herbaspirillum
HERPES Herpesviridae
HSV*1 Herpesvirus
HETESP Heterophyes
HETEHETE Heterophyes heterophyes
HOLDSP Holdemania
HOLDFILI Holdemania filiformis
WANGDERM*2 Hormiscium dermatitidis
CLADO*1 Hormodendrum
WANGDERM*3 Hormodendrum dermatitidis
HORMSP Hormonema
HORMDERM Hormonema dermatoides
EXOPWERN*4 Hortaea werneckii
CMV*1 Human (beta) herpes virus 5
ADV Human adenovirus
CORTU Human coronavirus
COX Human coxsackievirus
COXA Human coxsackievirus A
COXB Human coxsackievirus B
CMV Human cytomegalovirus 5
ECHOV Human echovirus
HSV Human herpes simplex virus
HSV1 Human herpes simplex virus type 1
HSV2 Human herpes simplex virus type 2
VZ Human herpesvirus 3
EBV Human herpesvirus 4
HHV6 Human Herpesvirus 6
HHV8 Human Herpesvirus 8
HIV2 Human immunodeficiency virus type 2
HIV1 Human immunodeficiency virus type I
HMPV Human metapneumovirus
PAPHW Human papillomavirus
PFLU Human parainfluenza viruses
POLIO Human poliovirus
RSV Human respiratory syncytial virus
RHINOV Human rhinovirus
HTLV1 Human T-lymphotropic virus 1
HTLV2 Human T-lymphotropic virus 2
TAENI*1 Hydatigera
HYMEN Hymenolepis
IGNASP Ignavigranum
IGNARUOF Ignavigranum ruoffiae
FLUA Influenza A virus
H1N1 Influenza A virus subtype H1N1
FLUB Influenza B virus
FLUC Influenza C virus
FLU Influenza virus
INQUSP Inquilinus
INQULIMO Inquilinus limosus
ISOSP Isospora
JANISP Janibacter
JANIHOYL Janibacter hoylei
JC JC virus
JONSP Jonesia
JONDE Jonesia denitrificans
KERSSP Kerstersia
KERSGYIO Kerstersia gyiorum
KINSP Kingella
KINDE Kingella denitrificans
SUTIND*1 Kingella indologenes
KINKI Kingella kingae
KINORAL Kingella oralis
KINPOTU Kingella potus
KS Klebsiella
EA Klebsiella aerogenes
KLEGRA Klebsiella granulomatis
RAOORN*1 Klebsiella ornithinolytica
KO Klebsiella oxytoca
KLEOZ*1 Klebsiella ozaenae
RAOPLA*1 Klebsiella planticola
KP Klebsiella pneumoniae
KLEOZ Klebsiella pneumoniae ozaenae
KLEPNE Klebsiella pneumoniae pneumoniae
KLERH Klebsiella pneumoniae rhinoscleromatis
KLERH*1 Klebsiella rhinoscleromatis
KLESING Klebsiella singaporensis
RAOTER*1 Klebsiella terrigena
RAOPLA*2 Klebsiella trevisanii
KLEVARI Klebsiella variicola
KLOESP Kloeckera
KLUSP Kluyvera
KLUAS Kluyvera ascorbata
KLUCR Kluyvera cryocrescens
KLUGEOR Kluyvera georgiana
KLUINTE Kluyvera intermedia
KLUYSP Kluyveromyces
KLUYMAR*3 Kluyveromyces fragilis
KLUYLAC Kluyveromyces lactis
KLUYMAR Kluyveromyces marxianus
KOCSP Kocuria
KOCROS*2 Kocuria erythromyxa
KOCKRI Kocuria kristinae
KOCROS Kocuria rosea
KOCVAR Kocuria varians
KODASP Kodamaea
PICOHM Kodamaea ohmeri
KOSASP Kosakonia
ENTECOWA Kosakonia cowanii
YOKRE*2 Koserella trabulsii
KROPSP Kroppenstedtia
KROPEBUR Kroppenstedtia eburnea
KURSP Kurthia
KURBE Kurthia bessoni
KYTSP Kytococcus
KYSED Kytococcus sedentarius
LACHASP Lachancea
LACHAFERM Lachancea fermentati
LACHSP Lachnoanaerobaculum
LACHORAL Lachnoanaerobaculum orale
LS Lactobacillus
LACAC Lactobacillus acidophilus
LACAM Lactobacillus amylovorus
LACANTR Lactobacillus antri
LACPLAN*1 Lactobacillus arizonensis
LACBRE Lactobacillus brevis
LACBUCH Lactobacillus buchneri
LACCS Lactobacillus casei
LACCA*2 Lactobacillus catenaformis
LACFER*1 Lactobacillus cellobiosus
WEISCONF*1 Lactobacillus confusus
LACCR Lactobacillus crispatus
LACDELB Lactobacillus delbrueckii
LACFER Lactobacillus fermentum
LACGA Lactobacillus gasseri
LACGAST Lactobacillus gastricus
LACINER Lactobacillus iners
LACJEN Lactobacillus jensenii
LACJO Lactobacillus johnsonii
LACKALI Lactobacillus kalixensis
ATOMIN*1 Lactobacillus minutus
LACOR Lactobacillus oris
LACPARA Lactobacillus paracasei
LACPLAN Lactobacillus plantarum
LACREUT Lactobacillus reuteri
LACRHAM Lactobacillus rhamnosus
ATORIM*1 Lactobacillus rimae
LACSAKE Lactobacillus sakei
LACSALI Lactobacillus salivarius
LACULTU Lactobacillus ultunensis
LACVA Lactobacillus vaginalis
LACVITU Lactobacillus vitulinus
LACTSP Lactococcus
LACTGARV Lactococcus garvieae
LACTLACT Lactococcus lactis
LASISP Lasiodiplodia
LASITHEO Lasiodiplodia theobromae
LASA Lassa virus
LECSP Leclercia
LECAD Leclercia adecarboxylata
LECYSP Lecythophora
LECYHOFF Lecythophora hoffmannii
LECYMUTA Lecythophora mutabilis
LEGS Legionella
LEGADEL Legionella adelaidensis
LEGAN Legionella anisa
LEGBELI Legionella beliardensis
LEGBI Legionella birminghamensis
LEGBOZE Legionella bozemanae
LEGBR Legionella brunensis
LEGBUSA Legionella busanensis
LEGCH Legionella cherrii
LEGCI Legionella cincinnatiensis
LEGDRAN Legionella drancourtii
LEGDROZ Legionella drozanskii
FLDUM Legionella dumoffii
LEGER Legionella erythra
LEGFAIR Legionella fairfieldensis
LEGFALL Legionella fallonii
LEGFE Legionella feeleii
LEGGE Legionella geestiana
LEGGO Legionella gormanii
LEGHA Legionella hackeliae
LEGIS Legionella israelensis
LEGJA Legionella jamestowniensis
LEGJO Legionella jordanis
LEGLANS Legionella lansingensis
LEGLO Legionella londiniensis
LEGLB Legionella longbeachae
LEGLYTI Legionella lytica
TATMAC Legionella maceachernii
TATMIC Legionella micdadei
LEGMO Legionella moravica
LEGNA Legionella nautarum
LEGOK Legionella oakridgensis
LEGPA Legionella parisiensis
TATMIC*2 Legionella pittsburghensis
LP Legionella pneumophila
LEGQA Legionella quateirensis
LEGQI Legionella quinlivanii
LEGROWB Legionella rowbothamii
LEGRU Legionella rubrilucens
LEGSH Legionella sainthelensi
LEGSA Legionella santicrucis
LEGSK Legionella shakespearei
LEGSP Legionella spiritensis
LEGST Legionella steigerwaltii
LEGTAUR Legionella taurinensis
LEGTU Legionella tucsonensis
LEGWA Legionella wadsworthii
LEGWALT Legionella waltersii
LEGWO Legionella worsleiensis
LEIFSP Leifsonia
LEIFAQUA Leifsonia aquatica
LEIFXYLI Leifsonia xyli
LEISH Leishmania
LELLSP Lelliottia
ENTAU*1 Lelliottia amnigena
ENTENIMI Lelliottia nimipressuralis
LEMSU Leminorella
LEMGR Leminorella grimontii
LEMRI Leminorella richardii
LEPTSP Leptosphaeria
LEPTSENE Leptosphaeria senegalensis
LEPTTOMP Leptosphaeria tompkinsii
LEPSP Leptospira
LEPIN Leptospira interrogans
LEPTS Leptotrichia
EUBSA*1 Leptotrichia aerogenes
LEPTB Leptotrichia buccalis
LEPTGOOD Leptotrichia goodfellowii
LEPTTREV Leptotrichia trevisanii
LEPTWADE Leptotrichia wadei
LEUC Leuconostoc
LEUCI*1 Leuconostoc amelibiosum
LEUCI Leuconostoc citreum
LEULA Leuconostoc lactis
LEUME Leuconostoc mesenteroides
LEUPS Leuconostoc pseudomesenteroides
CITAM*1 Levinea amalonatica
CITKO*2 Levinea malonitica
LISSP Listeria
JONDE*1 Listeria denitrificans
LISGR Listeria grayi
LISTIN Listeria innocua
LISIVAN Listeria ivanovii
LM Listeria monocytogenes
LISSEE Listeria seeligeri
LISWELS Listeria welshimeri
LISTSP Listonella
LOBOA Loboa
LODDSP Lodderomyces
LODDELON Lodderomyces elongisporus
VIBHAR*2 Lucibacterium harveyi
LCM Lymphocytic choriomeningitis virus
MACSP Macrococcus
MACBOVI Macrococcus bovicus
MACCARO Macrococcus carouselicus
MACCAS Macrococcus caseolyticus
MACEQUI Macrococcus equipercicus
ALTER*1 Macrosporium
MADUR Madurella
MADUGRIS Madurella grisea
MADUMYCE Madurella mycetomatis
MADUMYCE*1 Madurella mycetomi
MALAS Malassezia
MALFUR Malassezia furfur
MALGLOB Malassezia globosa
MALFUR*3 Malassezia ovale
MALPAC Malassezia pachydermatis
MALREST Malassezia restricta
MALSYMP Malassezia sympodialis
MALBSP Malbranchea
MANNSP Mannheimia
PASHE Mannheimia haemolytica
MARB Marburgvirus
MASSSP Massilia
MASSTIMO Massilia timonae
MASTSP Mastadenovirus
MEASL Measles virus
MEGASP Megamonas
MEGAHYPE Megamonas hypermegale
MEGAHYPE*1 Megamonas hypermegas
MEGSP Megasphaera
MEGEL Megasphaera elsdenii
METASP Metarhizium
METAANIS Metarhizium anisopliae
SA*4 Methicillin-resistant Staphylococcus aureus
METSP Methylobacterium
METME Methylobacterium mesophilicum
METZATM Methylobacterium zatmanii
MEYESP Meyerozyma
PICGUIL Meyerozyma guilliermondii
MICRSP Microbacterium
MICRARBO Microbacterium arborescens
MICRHYDR Microbacterium hydrocarbonoxydans
MICRIMPE Microbacterium imperiale
MICRLACT Microbacterium lacticum
MICRLIQU Microbacterium liquefaciens
MICRMARI Microbacterium maritypicum
MICROXYD Microbacterium oxydans
MICRPARA Microbacterium paraoxydans
MICRRESI Microbacterium resistens
MICG Micrococcus
MICANT Micrococcus antarcticus
MICLUT*3 Micrococcus flavus
NESTHALO*1 Micrococcus halobius
KOCKRI*1 Micrococcus kristinae
MICLUT Micrococcus luteus
MICLYL Micrococcus lylae
MICLUT*1 Micrococcus lysodeikticus
PEPNI*1 Micrococcus niger
MICNIS Micrococcus nishinomiyaensis
KOCROS*1 Micrococcus roseus
KYSED*1 Micrococcus sedentarius
MICROMSP Micromonospora
MICROMCHAL Micromonospora chalcea
NOCBREV*1 Micropolyspora brevicatena
MICROSP Microsporidium
MICRO Microsporum
SARINK*4 Microsporum brachytomum
MITSP Mitsuokella
PREDEN*1 Mitsuokella dentalis
MITML Mitsuokella multacida
MOBSP Mobiluncus
MOBCU Mobiluncus curtisii
MOBMU Mobiluncus mulieris
MOESP Moellerella
MOEWI Moellerella wisconsensis
MOGSP Mogibacterium
MOGDIVE Mogibacterium diversum
MOGNEGL Mogibacterium neglectum
MOGTIM Mogibacterium timidum
MOGVESC Mogibacterium vescum
MOLD Mold
MCV Molluscum contagiosum virus
POXMO Monkeypox virus
SCEDAPIO*1 Monosporium apiospermum
MOS Moraxella
RIEMANAT*1 Moraxella anatipestifer
MORAT Moraxella atlantae
MORBOEV Moraxella boevrei
MORBO Moraxella bovis
MORCANI Moraxella canis
MORCAPR Moraxella caprae
MORCA Moraxella catarrhalis
MORCUNI Moraxella cuniculi
KINKI*1 Moraxella kingae
KINKI*2 Moraxella kingii
MORLA Moraxella lacunata
MORLINC Moraxella lincolnii
MORLA*3 Moraxella liquefaciens
MORNL Moraxella nonliquefaciens
MOROBLO Moraxella oblonga
MOROS Moraxella osloensis
MOROVIS Moraxella ovis
PSYPHEN*1 Moraxella phenylpyruvica
OLIUT*1 Moraxella urethralis
MORBSP Morbillivirus
MORSP Morganella
MORMO Morganella morganii
MORSI Morganella morganii sibonii
MORTSP Mortierella
MORTWOLF Mortierella wolfii
MUCSP Mucor
MUCCIRC Mucor circinelloides
MUCHIEM Mucor hiemalis
MUCCIRC*1 Mucor janssenii
MUCCIRC*2 Mucor javanicus
RHIZMPUS*1 Mucor pusillus
MUCRACE Mucor racemosus
MUCRA Mucor ramosissimus
MUCROUX Mucor rouxians
ALCXYL*2 multidrug resistant Achromobacter xylosoxidans
ACS*1 multidrug resistant Acinetobacter
ENTAB*2 multidrug resistant Enterobacter asburiae
KP*2 multidrug resistant Klebsiella pneumoniae
MORMO*1 multidrug resistant Morganella morganii
PA*2 multidrug resistant Pseudomonas aeruginosa
ENC*3 multiple drug-resistant Enterobacter cloacae
PM*1 multiple drug-resistant Proteus mirabilis
MUMPS Mumps virus
MYCESTER Mycelia sterilia
MYCSP Mycobacterium
MYCAB Mycobacterium abscessus
MYCAF Mycobacterium africanum
MYCAGRI Mycobacterium agri
MYCAICH Mycobacterium aichiense
MYCAL Mycobacterium alvei
MYCGO*1 Mycobacterium aquae
MYCAS Mycobacterium asiaticum
MYCAU Mycobacterium aurum
MYCAUST Mycobacterium austroafricanum
MYSCP Mycobacterium avium
MYCAV*2 Mycobacterium avium complex
MYCMA*1 Mycobacterium balnei
MYCBOEN Mycobacterium boenickei
MYCBOHE Mycobacterium bohemicum
MYCBO Mycobacterium bovis
MYCBRAN Mycobacterium branderi
MYCBRIS Mycobacterium brisbanense
MYCBRUM Mycobacterium brumae
MYCIN*1 Mycobacterium brunense
MYCCANA Mycobacterium canariasense
MYCCAN Mycobacterium canetti
MYCCAPR Mycobacterium caprae
MYCCELA Mycobacterium celatum
MYCCH Mycobacterium chelonae
MYCCHES Mycobacterium chesapeaki
MYCCHIT Mycobacterium chitae
MYCCHLO Mycobacterium chlorophenolicum
MYCCHUB Mycobacterium chubuense
MYCCO Mycobacterium confluentis
MYCCONS Mycobacterium conspicuum
MYCCOOK Mycobacterium cookii
MYCCOS Mycobacterium cosmeticum
MYCDIER Mycobacterium diernhoferi
MYCDORI Mycobacterium doricum
MYCDUVA Mycobacterium duvalii
MYCELEP Mycobacterium elephantis
MYCFALL Mycobacterium fallax
MYCFARC Mycobacterium farcinogenes
MYCFL Mycobacterium flavescens
MYCFOR Mycobacterium fortuitum
MYCFC Mycobacterium fortuitum complex
MYCFC*1 Mycobacterium fortuitum-chelonae complex
MYCFRED Mycobacterium frederiksbergense
MYCGADI Mycobacterium gadium
MYCGA Mycobacterium gastri
MYCGN Mycobacterium genavense
MYCFOR*1 Mycobacterium giae
MYCGILV Mycobacterium gilvum
MYCGOO Mycobacterium goodii
MYCGO Mycobacterium gordonae
MYCSI*1 Mycobacterium habana
MYCHA Mycobacterium haemophilum
MYCHASS Mycobacterium hassiacum
MYCHECK Mycobacterium heckeshornense
MYCHEID Mycobacterium heidelbergense
MYCHIBE Mycobacterium hiberniae
MYCHODL Mycobacterium hodleri
MYCHOLS Mycobacterium holsaticum
MYCHOUS Mycobacterium houstonense
MYCIMMU Mycobacterium immunogenum
MYCINTE Mycobacterium interjectum
MYCBINTE Mycobacterium intermedium
MYCIN Mycobacterium intracellulare
MYCPARAT*1 Mycobacterium johnei
MYCKA Mycobacterium kansasii
MYCKOMO Mycobacterium komossense
MYCKUBI Mycobacterium kubicae
MYCLACT Mycobacterium lacticola
MYCLACU Mycobacterium lacus
MYCLENT Mycobacterium lentiflavum
MYCLE Mycobacterium leprae
MYCKA*1 Mycobacterium luciflavum
MYCMADA Mycobacterium madagascariense
MYCMAGE Mycobacterium mageritense
MYCML Mycobacterium malmoense
MYCMA Mycobacterium marinum
MYCMIC Mycobacterium microti
MYCFOR*2 Mycobacterium minetti
MYCMONT Mycobacterium montefiorense
MYCMORI Mycobacterium moriokaense
MYCMUC Mycobacterium mucogenicum
MYCMURA Mycobacterium murale
MYCNEOA Mycobacterium neoaurum
MYCNEWO Mycobacterium neworleansense
MYCNO Mycobacterium nonchromogenicum
MYCNOVO Mycobacterium novocastrense
MYCOBUE Mycobacterium obuense
MYCPALU Mycobacterium palustre
MYCPARA Mycobacterium parafortuitum
MYCPAR Mycobacterium parascrofulaceum
MYCPARAT Mycobacterium paratuberculosis
MYCPARM Mycobacterium parmense
MYCPERE Mycobacterium peregrinum
MYCPH Mycobacterium phlei
MYCPHO Mycobacterium phocaicum
MYCPINN Mycobacterium pinnipedii
MYCMA*2 Mycobacterium platypoecilus
MYCPORC Mycobacterium porcinum
MYCPSYC Mycobacterium psychrotolerans
MYCRHOD Mycobacterium rhodesiae
MYCSC Mycobacterium scrofulaceum
MYCSEPT Mycobacterium septicum
MYCSHER Mycobacterium sherrisii
MYCSH Mycobacterium shimoidei
MYCSHOT Mycobacterium shottsii
MYCSI Mycobacterium simiae
MYCSM Mycobacterium smegmatis
MYCSPHA Mycobacterium sphagni
MYCSZ Mycobacterium szulgai
MYCTE Mycobacterium terrae
MYCTERR Mycobacterium terrae complex
MYCTH Mycobacterium thermoresistibile
MYCTOKA Mycobacterium tokaiense
MYCTRIP Mycobacterium triplex
MYCTR Mycobacterium triviale
TB Mycobacterium tuberculosis
TBCX Mycobacterium tuberculosis complex
MYCTUSC Mycobacterium tusciae
MYCUL Mycobacterium ulcerans
MYCVA Mycobacterium vaccae
MYCVANB Mycobacterium vanbaalenii
MYCWOLI Mycobacterium wolinskyi
MYCXE Mycobacterium xenopi
MYCAV Mycobacterium, avium-intracellulare group
MYCS Mycoplasma
MYCBU Mycoplasma buccale
MYCFA Mycoplasma faucium
MYCFE Mycoplasma fermentans
MYCGE Mycoplasma genitalium
MYCHO Mycoplasma hominis
MYCFE*1 Mycoplasma incognitus
MYCLI Mycoplasma lipophilum
MYCOR Mycoplasma orale
MYCPE Mycoplasma penetrans
MYCPIRU Mycoplasma pirum
MP Mycoplasma pneumoniae
MYCPR Mycoplasma primatum
MYCSA Mycoplasma salivarium
MYCSR Mycoplasma spermatophilum
CANLIP*2 Mycotorula lipolytica
MRYSP Myroides
MYROD Myroides odoratus
NAEGL Naegleria
PICSP*1 Nakazawaea
ARTHSP*1 Nannizzia
NECAT Necator
NS Neisseria
NEICA Neisseria canis
MORCA*2 Neisseria catarrhalis
NEICI Neisseria cinerea
MORCUNI*1 Neisseria cuniculi
NEIDENT Neisseria dentiae
NEIEL Neisseria elongata
NEIELOELO Neisseria elongata elongata
NEIELOGLY Neisseria elongata glycolytica
NEINI Neisseria elongata nitroreducens
NEIFL Neisseria flavescens
GC Neisseria gonorrhoeae
NEIIGUA Neisseria iguanae
NEILA Neisseria lactamica
NEIMACA Neisseria macacae
NM Neisseria meningitidis
NEIMU Neisseria mucosa
NEISORAL Neisseria oralis
MOROVIS*2 Neisseria ovis
NEIPA*1 Neisseria parelongata
NEISPERF Neisseria perflava
NEIPO Neisseria polysaccharea
NEISI Neisseria sicca
NEISU Neisseria subflava
NEIPA Neisseria weaveri
NEORSP Neorickettsia
NEORSENN Neorickettsia sennetsu
NEOSP Neosartorya
NEOFISC Neosartorya fischeri
NEOSDIMI Neoscytalidium dimidiatum
NESTSP Nesterenkonia
NESTHALO Nesterenkonia halobia
NIGRSP Nigrospora
NOCSP Nocardia
NOCABSC Nocardia abscessus
NOCAFRI Nocardia africana
NOCANAE Nocardia anaemiae
NOCAOBE Nocardia aobensis
NOCARAO Nocardia araoensis
NOCARTH Nocardia arthritidis
NOCASIA Nocardia asiatica
NOCAS Nocardia asteroides
NOCASTE Nocardia asteroides complex
NOCBEIJ Nocardia beijingensis
NOCBR Nocardia brasiliensis
NOCBREV Nocardia brevicatena
NOCCARN Nocardia carnea
NOCOC*2 Nocardia caviae
NOCCYRI Nocardia cyriacigeorgica
NOCELEG Nocardia elegans
NOCFARC Nocardia farcinica
NOCHIGO Nocardia higoensis
NOCINOH Nocardia inohanensis
NOCKRUC Nocardia kruczakiae
NOCMEXI Nocardia mexicana
NOCNIIG Nocardia niigatensis
NOCNOVA Nocardia nova
AMYCORIE*1 Nocardia orientalis
NOCOC*3 Nocardia otitidiscaviarum
NOCOC Nocardia otitis caviarum
NOCPAUC Nocardia paucivorans
NOCPNEU Nocardia pneumoniae
NOCPSEU Nocardia pseudobrasiliensis
NOCSIEN Nocardia sienata
NOCTEST Nocardia testacea
NOCTRAN Nocardia transvalensis
NOCVETE Nocardia veterana
NOCYAMA Nocardia yamanashiensis
NOCASP Nocardiopsis
NOCADASS Nocardiopsis dassonvillei
NOCASYNN Nocardiopsos synnemataformans
NORO Norovirus
PARNR Norwalk virus
NVS Nutritionally variant streptococci
OBPSU Obesumbacterium
OBESPROT Obesumbacterium proteus
OCHSP Ochrobactrum
OCHAN Ochrobactrum anthropi
OCHINTE Ochrobactrum intermedium
OCHRSP Ochroconis
OCHRCONS Ochroconis constricta
OCHRGALL Ochroconis gallopava
OCHRGALL*1 Ochroconis gallopavum
SCOLHUMI*1 Ochroconis humicola
BACSPP Odoribacter
BACSP Odoribacter splanchnicus
OERSP Oerskovia
OGATSP Ogataea
PICANGU*1 Ogataea angusta
OGATPOLY Ogataea polymorpha
ARTHRSP*1 Oidiodendron
OLISP Oligella
OLIUR Oligella ureolytica
OLIUT Oligella urethralis
GEOCAN*1 Oospora lactis
ORBI Orbivirus
POXOR Orf virus
ORISP Orientia
ORTSU Orientia tsutsugamushi
REOTU Orthoreovirus
PAECSP Paecilomyces
PAECJAVA Paecilomyces javanicus
PAECLILA Paecilomyces lilacinus
PAECMARQ Paecilomyces marquandii
PAECVARI Paecilomyces variotii
PAESP Paenibacillus
PAEAGAR Paenibacillus agaridevorans
PAEALV Paenibacillus alvei
BEDAP Paenibacillus edaphicus
PAEVALI*1 Paenibacillus gordonae
PAELARV Paenibacillus larvae
PAELENT Paenibacillus lentimorbus
PAEMAC Paenibacillus macerans
PAEPABU Paenibacillus pabuli
PAEPOL Paenibacillus polymyxa
PAEPOPI Paenibacillus popilliae
PAEPROV Paenibacillus provencensis
PAETHIA Paenibacillus thiaminolyticus
PAEURIN Paenibacillus urinalis
PAEVALI Paenibacillus validus
PANDSP Pandoraea
PANDAPIS Pandoraea apista
PANDNORI Pandoraea norimbergensis
PANDPNOM Pandoraea pnomenusa
PANDPULM Pandoraea pulmonicola
PANDSPUT Pandoraea sputorum
PANOT Pantoea
PANAG Pantoea agglomerans
PANANAN*3 Pantoea ananas
PANANAN Pantoea ananatis
PANDI Pantoea dispersa
PARASP Parabacteroides
BACDT Parabacteroides distasonis
PARAGOLD Parabacteroides goldsteinii
BACMR Parabacteroides merdae
PARABSP Paraburkholderia
BURFUNG Paraburkholderia fungorum
PARSP Paracoccus
PARYEE Paracoccus yeei
PARASSP Parascardovia
PARADENT Parascardovia denticolens
PARVSP Parvimonas
PARVMICR Parvimonas micra
PARTU Parvovirus
PASSP Pasteurella
PASAE Pasteurella aerogenes
PASBE Pasteurella bettyae
PASCABA Pasteurella caballi
PASCA Pasteurella canis
PASDA Pasteurella dagmatis
PASHE*1 Pasteurella haemolytica
PASMU Pasteurella multocida
PASMG Pasteurella multocida gallicida
PASMM Pasteurella multocida multocida
PASMS Pasteurella multocida septica
PASPN Pasteurella pneumotropica
PASSTOM Pasteurella stomatis
ACURE*1 Pasteurella ureae
PATUSP Patulibacter
PECSP Pectobacterium
LICE Pediculus humanus
PEDSP Pediococcus
PEDAC Pediococcus acidilactici
PEDPE Pediococcus pentosaceus
AEURQ*1 Pediococcus urinaeequi
PEDOSP Pedobacter
PEDOHEPA Pedobacter heparinus
PEDOPISC Pedobacter piscium
PENIC Penicillium
PENICITR Penicillium citrinum
PENICOMM Penicillium commune
PENIDECU Penicillium decumbens
PENIEXPA Penicillium expansum
PENIGRIS Penicillium griseofulvum
PAECLILA*1 Penicillium lilacinum
PENIMARN Penicillium marneffei
PENIGRIS*1 Penicillium patulum
PENIPUBE Penicillium puberulum
TALARUBE*1 Penicillium rubrum
PENISPIN Penicillium spinulosum
PENIVERR Penicillium verruculosum
PENIVIRI Penicillium viridicatum
PSU Peptococcus
PEPTASAC*2 Peptococcus asaccharolyticus
PEPNI Peptococcus niger
STASL*1 Peptococcus saccharolyticus
PEPTSP Peptoniphilus
PEPTASAC Peptoniphilus asaccharolyticus
PEPTHARE Peptoniphilus harei
PEPTIVOR Peptoniphilus ivorii
PEPTLACR Peptoniphilus lacrimalis
PSS Peptostreptococcus
PSA Peptostreptococcus anaerobius
PEPTASAC*1 Peptostreptococcus asaccharolyticus
MEGEL*1 Peptostreptococcus elsdenii
PPSHY*1 Peptostreptococcus hydrogenalis
ANALAC*1 Peptostreptococcus lactolyticus
FINMAG*1 Peptostreptococcus magnus
PARVMICR*1 Peptostreptococcus micros
ANAOCTA*1 Peptostreptococcus octavius
ATOPAR*1 Peptostreptococcus parvulus
ANAPRE*1 Peptostreptococcus prevotii
BLAUPROD*2 Peptostreptococcus productus
ANATET*1 Peptostreptococcus tetradius
ANAVAG*1 Peptostreptococcus vaginalis
PSEBOY*1 Petriellidium boydii
PSEBOY*4 Petriellidum boydii
PHAESP Phaeoacremonium
PHAEPARA Phaeoacremonium parasiticum
PHAEOSP Phaeoannellomyces
EXOPWERN*2 Phaeoannellomyces werneckii
EXOPWERN*5 Phaeoannelomyces werneckii
PHASP Phaeococcomyces
PHAEX Phaeococcomyces exophialae
PHIASP Phialemonium
PHIACURV Phialemonium curvatum
PHIADIMO Phialemonium dimorphosporum
PHIAOBOV Phialemonium obovatum
LECYMUTA*1 Phialophera mutabilis
PHIAL Phialophora
PHIAAMER Phialophora americana
FONSECOM*2 Phialophora compacta
FONSECOM*3 Phialophora compactum
WANGDERM*1 Phialophora dermatitidis
PHIAEURO Phialophora europaea
EXOPJEAN*2 Phialophora gougerotii
LECYHOFF*1 Phialophora hoffmannii
EXOPJEAN*1 Phialophora jeanselmei
FONSEPED*1 Phialophora pedrosoi
PLEURICH*1 Phialophora richardsiae
EXOPSPIN*1 Phialophora spinifera
PHIAVERR Phialophora verrucosa
PHOMA Phoma
PHOSP Photobacterium
PHODAM Photobacterium damselae damselae
PHOTSP Photorhabdus
PHOTASYM Photorhabdus asymbiotica
XENLU Photorhabdus luminescens
PHOTTEMP Photorhabdus temperata
PICSP Pichia
PICANGU Pichia angusta
PICANA Pichia anomala
CYBEFABI*3 Pichia fabianii
PICFAR Pichia farinosa
PICGUIL*1 Pichia guilliermondii
PICKUDR Pichia kudriavzevii
PICOHM*1 Pichia ohmeri
PICPOL*1 Pichia polymorpha
PICTU Picornavirus group
PIEDR Piedraia
PIEDHORT Piedraia hortae
PITHSP Pithomyces
MALAS*1 Pityrosporum
MALPAC*1 Pityrosporum canis
MALFUR*1 Pityrosporum furfur
MALFUR*2 Pityrosporum orbiculare
MALFUR*4 Pityrosporum ovale
MALPAC*2 Pityrosporum pachydermatis
PLASP Plasmodium
PLAFA Plasmodium falciparum
PLAKNOW Plasmodium knowlesi
PLAMA Plasmodium malariae
PLAOV Plasmodium ovale
PLAVI Plasmodium vivax
PLESP Plesiomonas
PLESH Plesiomonas shigelloides
PLEUSP Pleurostomophora
PLEURICH Pleurostomophora richardsiae
PLURSP Pluralibacter
ENTGE Pluralibacter gergoviae
ENTEPYRI Pluralibacter pyrinus
POLYOMA Polyomavirus
PORSP Porphyromonas
PORAS Porphyromonas asaccharolyticus
PORCANG Porphyromonas cangingivalis
PORCANO Porphyromonas canoris
PORCANS Porphyromonas cansulci
PORCATO Porphyromonas catoniae
PORCIRC Porphyromonas circumdentaria
PORCREV Porphyromonas crevioricanis
POREN Porphyromonas endodontalis
PORGI Porphyromonas gingivalis
PORGING Porphyromonas gingivicanis
PORGULA Porphyromonas gulae
PORLE Porphyromonas levii
PORSA Porphyromonas macacae
PORSA*3 Porphyromonas salivosa
PORSOME Porphyromonas somerae
POXTU Poxviridae
PRASP Pragia
PRAFO Pragia fontium
PRESP Prevotella
PREBI Prevotella bivia
PREBC Prevotella buccae
PREBU Prevotella buccalis
PRECO Prevotella corporis
PREDEN Prevotella dentalis
PREDE Prevotella denticola
PREDI Prevotella disiens
PREENOE Prevotella enoeca
PREHE Prevotella heparinolytica
PREIN Prevotella intermedia
PRELO Prevotella loescheii
PREMARS Prevotella marshii
PREM Prevotella melaninogenica
PREMULT Prevotella multiformis
PREMULTI Prevotella multisaccharivorax
PRENI Prevotella nigrescens
PREOR Prevotella oralis
PREORAL Prevotella oralis group
PREOS Prevotella oris
PREOU*2 Prevotella oulora
PREOU Prevotella oulorum
PREPALL Prevotella pallens
PRERU Prevotella ruminicola
PRESALI Prevotella salivae
PRESHAH Prevotella shahii
PRETANN Prevotella tannerae
PREVE Prevotella veroralis
PREZO*1 Prevotella zoogleoformans
PRPG Propionibacterium
PRPA Propionibacterium acidipropionici
PRPAC*6 Propionibacterium acnes
PRPAU Propionibacterium australiense
PROAV Propionibacterium avidum
PRPCY Propionibacterium cyclohexanicum
PRPF Propionibacterium freudenreichii
PROGR Propionibacterium granulosum
PFI*1 Propionibacterium innocuum
PRPJE Propionibacterium jensenii
PRPLY Propionibacterium lymphophilum
PRPMI Propionibacterium microaerophilum
PRPPR Propionibacterium prionicus
PRPRO Propionibacterium propionicum
PRPTH*1 Propionibacterium rubrum
PRPTH Propionibacterium thoenii
PROPISP Propioniferax
PFI Propioniferax innocus
PROPSP Propionimicrobium
PROPLYMP Propionimicrobium lymphophilum
PTS Proteus
PROTHAUS Proteus hauseri
PRVAL*1 Proteus inconstans, subgroup A
PM Proteus mirabilis
PRTMY Proteus myxofaciens
PRTPE Proteus penneri
PR*2 Proteus rettgeri
PV Proteus vulgaris
PROTO Prototheca
SARINK*2 Prototheca filamenta
PROWIC Prototheca wickerhamii
PROZOP Prototheca zopfii
PROTOZOAN Protozoan
PRU Providencia
PRVAL Providencia alcalifaciens
PRVRU*2 Providencia friedericiana
PRVHE Providencia heimbachae
PR Providencia rettgeri
PRVRU Providencia rustigianii
PRS Providencia stuartii
PSASP Pseudallescheria
PSEBOY Pseudallescheria boydii
PSASP*1 Pseudoallescheria
PSEBOY*3 Pseudoallescheria boydii
PSEUDOCSP Pseudoclavibacter
PSEFSP Pseudoflavonifractor
PSEFCAPI Pseudoflavonifractor capillosus
PSP Pseudomonas
DELFAC*2 Pseudomonas acidovorans
PA Pseudomonas aeruginosa
PSEAL Pseudomonas alcaligenes
BURGL*1 Pseudomonas alliicola
BURGL*2 Pseudomonas antimicrobica
STEMA*5 Pseudomonas beteli
STEMA*2 Pseudomonas betle
BURCE*1 Pseudomonas cepacia
PST*3 Pseudomonas chloritidismutans
PSECH Pseudomonas chlororaphis
BURGL*3 Pseudomonas cocovenenans
ACDEL*1 Pseudomonas delafieldii
BREDIM*1 Pseudomonas diminuta
ACIDFACI*1 Pseudomonas facilis
PF Pseudomonas fluorescens
BURGL*4 Pseudomonas gladioli
CHSLU*1 Pseudomonas luteola
BURMA*1 Pseudomonas mallei
STEMA*1 Pseudomonas maltophilia
PSEMARG Pseudomonas marginalis
PSEMEN Pseudomonas mendocina
PSEMONT Pseudomonas monteilii
PSEMOSS Pseudomonas mosselii
BURCE*2 Pseudomonas multivorans
ALFE*2 Pseudomonas odorans
PSORY Pseudomonas oryzihabitans
SPMPA*3 Pseudomonas paucimobilis
PST*1 Pseudomonas perfectomarina
PSEPE Pseudomonas pertucinogena
RALPIC*2 Pseudomonas pickettii
PSEPS Pseudomonas pseudoalcaligenes
BURPM*4 Pseudomonas pseudomallei
PP Pseudomonas putida
SHEPF*1 Pseudomonas putrefaciens
BURPYRR*1 Pseudomonas pyrrocinia
PST Pseudomonas stutzeri
COMTE*1 Pseudomonas testosteroni
PSEVERO Pseudomonas veronii
BREVES*1 Pseudomonas vesicularis
PSEUSP Pseudoramibacter
PSALA Pseudoramibacter alactolyticus
PSEUDOXSP Pseudoxanthomonas
PSEUDOXKORE Pseudoxanthomonas koreensis
PSEUDSP Pseudozyma
PSEUAPHI Pseudozyma aphidids
PSYCHRSP Psychrobacillus
PSYCH Psychrobacter
PSYIM Psychrobacter immobilis
PSYPHEN Psychrobacter phenylpyruvicus
AURESP*1 Pullularia
AUREPULL*1 Pullularia pullulans
POXOR*2 Pustular dermatitis virus
PYREN Pyrenochaeta
PYRENROM Pyrenochaeta romeroi
RAB Rabies virus
RAHSP Rahnella
RAHAQ Rahnella aquatilis
RALSP Ralstonia
CUPRGILA*1 Ralstonia gilardii
RALINSI Ralstonia insidiosa
RALMAN Ralstonia mannitolilytica
RALPIC Ralstonia pickettii
CUPRRESP*1 Ralstonia respiraculi
RHINAQUA*1 Ramichloridium cerophilum
RAOSP Raoultella
RAOORN Raoultella ornithinolytica
RAOPLA Raoultella planticola
RAOTER Raoultella terrigena
RGM Rapid growing mycobacteria
REOTU*2 Reovirus group
RESPV Respirovirus
RHATU Rhabdovirus
RHINSP Rhinocladiella
RHINAQUA Rhinocladiella aquaspersa
RHINATRO Rhinocladiella atrovirens
FONSECOM*4 Rhinocladiella compacta
FONSECOM*5 Rhinocladiella compactum
FONSEPED*2 Rhinocladiella pedrosoi
EXOPSPIN*2 Rhinocladiella spinifera
RHINO Rhinosporidium
RHIZSP Rhizobium
RHIRAD Rhizobium radiobacter
RHIRUBI Rhizobium rubi
RHIVITI Rhizobium vitis
RHIZMSP Rhizomucor
RHIZMMIE Rhizomucor miehei
RHIZMPUS Rhizomucor pusillus
RHIZO Rhizopus
RHIZARRH Rhizopus arrhizus
RHIZMICR Rhizopus microsporus
RHIZSTOL*1 Rhizopus nigricans
RHIZARRH*1 Rhizopus oryzae
RHIZSTOL Rhizopus stolonifer
RHOSP Rhodococcus
TSUKPAUR*1 Rhodococcus aurantiacus
GORDBRON*1 Rhodococcus bronchialis
MYCCHLO*1 Rhodococcus chlorophenolicus
GORDSPUT*2 Rhodococcus chubuensis
RHOEQ Rhodococcus equi
RHOERYT Rhodococcus erythropolis
RHOFASC Rhodococcus fascians
RHOGLOB Rhodococcus globerulus
RHOGORD Rhodococcus gordoniae
RHOFASC*1 Rhodococcus luteus
GORDSPUT*1 Rhodococcus obuensis
RHORHOD Rhodococcus rhodochrous
RHORHOD*1 Rhodococcus roseus
GORDRUBR*2 Rhodococcus rubropertinctus
GORDTERR*1 Rhodococcus terrae
RHODO Rhodotorula
RHOGLU Rhodotorula glutinis
RHOMIN Rhodotorula minuta
RHORUB*1 Rhodotorula mucilaginosa
RHOPIL Rhodotorula pilimanae
RHORUB Rhodotorula rubra
RICSP Rickettsia
RICAK Rickettsia akari
RICCO Rickettsia conorii
RICPARK Rickettsia parkeri
RICPR Rickettsia prowazekii
BARQUI*2 Rickettsia quintana
RICRI Rickettsia rickettsii
RICSIBI Rickettsia sibirica
ORTSU*1 Rickettsia tsutsugamushi
RICTY Rickettsia typhi
RIEMSP Riemerella
RIEMANAT Riemerella anatipestifer
RVF Rift Valley fever virus
ROBISP Robinsoniella
ROBIPEOR Robinsoniella peoriensis
BARELIZ*1 Rochalimaea elizabethae
BARHEN*1 Rochalimaea henselae
BARQUI*1 Rochalimaea quintana
BARVIN*1 Rochalimaea vinsonii
ROSE Roseomonas
ROSECERV Roseomonas cervicalis
ROSEGILA Roseomonas gilardii
ROSEMUCO Roseomonas mucosa
ROTA Rotavirus
ROTSP Rothia
ROTAERI Rothia aeria
ROTDE Rothia dentocariosa
ROTHMU Rothia mucilaginosa
RUBEL Rubella virus
MEASL*1 Rubeola virus
RUBI Rubivirus
RUMISP Ruminococcus
RUMIGNAV Ruminococcus gnavus
RUMHAN*2 Ruminococcus hansenii
BLAUPROD*1 Ruminococcus productus
RUMMSP Rummeliibacillus
RUMMPYCN Rummeliibacillus pycnus
SACCSP Saccharomonospora
SACCGLAU Saccharomonospora glauca
SACCVIRI Saccharomonospora viridis
SACCH Saccharomyces
SACCER Saccharomyces cerevisiae
SACCHSP Saccharopolyspora
SACCHRECT Saccharopolyspora rectivirgula
SAKSSP Saksenaea
SAKSVASI Saksenaea vasiformis
CMV*2 Salivary gland virus
SAS Salmonella
SALBONG Salmonella bongori
SALENT Salmonella enterica
SAPRSP Saprochaete
SARCISP Sarcina
MICLUT*2 Sarcina luteus
SARCIVENT Sarcina ventriculi
SARINK*3 Sarcinomyces inkin
EXOPWERN*3 Sarcinomyces werneckii
SARCSP Sarcinosporon
SARINK Sarcinosporon inkin
SARCO Sarcocystis
SARCHOMI Sarcocystis hominis
SARCLIND Sarcocystis lindemanni
SARCSUIH Sarcocystis suihominis
SCAB Sarcoptes scabiei
NCOV2019 SARS-CoV-2
SCAB*1 Scabies mite
SCARSP Scardovia
SCARINOP Scardovia inopinata
SCEDSP Scedosporium
SCEDAPIO Scedosporium apiospermum
SCEDBOYD Scedosporium boydii
SCEPRO Scedosporium inflatum
SCEPRO*1 Scedosporium prolificans
SCHISP Schizophyllum
SCHICOMM Schizophyllum commune
SCHWSP Schwanniomyces
PICPOL Schwanniomyces polymorphus
SCOLSP Scolecobasidium
OCHRCONS*2 Scolecobasidium constrictum
SCOLHUMI Scolecobasidium humicola
SCOPSP Scopulariopsis
SCOPACRE Scopulariopsis acremonium
SCOPBREV Scopulariopsis brevicaulis
SCOPBRUM Scopulariopsis brumptii
SCOPCAND Scopulariopsis candida
SCYTSP Scytalidium
NEOSDIMI*2 Scytalidium dimidiatum
SCYTHYAL Scytalidium hyalinum
SELSP Selenomonas
SELAR Selenomonas artemidis
SELDI Selenomonas dianae
SELFL Selenomonas flueggei
SELIN Selenomonas infelix
SELNO Selenomonas noxia
SELST Selenomonas sputigena
SEPESP Sepedonium
SERSP Serpulina
BRACPILO*1 Serpulina pilosicoli
SSP Serratia
SEREN Serratia entomophila
SERFI Serratia ficaria
SERFO Serratia fonticola
SERGR Serratia grimesii
SL Serratia liquefaciens
SM Serratia marcescens
SR*1 Serratia marinorubra
SEROD Serratia odorifera
SERPL Serratia plymuthica
SERPS Serratia proteamaculans
SERQUIN Serratia quinivorans
SR Serratia rubidaea
SERUREI Serratia ureilytica
SHESP Shewanella
SHEALGA Shewanella algae
SHEPF Shewanella putrefaciens
SHISP Shigella
SHIGC Shigella boydii
SHIGA Shigella dysenteriae
SHIGB Shigella flexneri
SHIGD Shigella sonnei
SIMIAN Simian Virus 40
SIMOSP Simonsiella
ALYSCRAS*1 Simonsiella crassa
SIMOMUEL Simonsiella muelleri
SLACSP Slackia
SLACEXIG Slackia exigua
SLACHELI Slackia heliotrinireducens
STRBA Small-colony-forming beta-hemolytic group A streptococci
STRBC Small-colony-forming beta-hemolytic group C streptococci
STRBG Small-colony-forming beta-hemolytic group G streptococci
POXVR*1 Smallpox virus
SNEASP Sneathia
SNEASANG Sneathia sanguinegens
SOLISP Solibacillus
BSILV Solibacillus silvestris
SOLOSP Solobacterium
SOLOMOOR Solobacterium moorei
SPHSP Sphingobacterium
SPHFAEC Sphingobacterium faecium
PEDOHEPA*1 Sphingobacterium heparinum
SPHMI*1 Sphingobacterium mizutae
SPHMU Sphingobacterium multivorum
PEDOPISC*1 Sphingobacterium piscium
SPHST Sphingobacterium spiritivorum
SPHTH Sphingobacterium thalpophilum
SPMSP Sphingomonas
SPMPARA Sphingomonas parapaucimobilis
SPMPA Sphingomonas paucimobilis
SPISP Spirillum
SPORSP Sporobolomyces
SPOROSE Sporobolomyces roseus
SPOSAL Sporobolomyces salmonicolor
SPOROLSP Sporolactobacillus
BLAEV Sporolactobacillus laevolacticus
SPOROPSP Sporopachydermia
SPOROSSP Sporosarcina
SPOSP Sporothrix
SPOCYAN Sporothrix cyanescens
SPOSC*3 Sporothrix schenckii
SPOSC Sporothrix schenkii
SPOROSP Sporotrichum
SPOSC*2 Sporotrichum beurmannii
SPOROPRUI Sporotrichum pruinosum
SPOSC*1 Sporotrichum schenckii
SPOSC*4 Sporotrichum schenkii
SLE St Louis encephalitis virus
STACSP Stachybotrys
STACCHAR Stachybotrys chartarum
SS Staphylococcus
STAARL Staphylococcus arlettae
SA Staphylococcus aureus
STAAR Staphylococcus auricularis
STACS Staphylococcus capitis
STACC Staphylococcus capitis capitis
STACU Staphylococcus capitis urealyticus
STACAP Staphylococcus caprae
STACAR Staphylococcus carnosus
STACRC Staphylococcus carnosus carnosus
STACUT Staphylococcus carnosus utilis
MACCAS*1 Staphylococcus caseolyticus
STACHR Staphylococcus chromogenes
STACO Staphylococcus cohnii
STASCO Staphylococcus cohnii cohnii
STASUR Staphylococcus cohnii urealyticus
STACON Staphylococcus condimenti
STADELP Staphylococcus delphini
SE Staphylococcus epidermidis
STAEQ Staphylococcus equorum
STAEE Staphylococcus equorum equorum
STAEL Staphylococcus equorum linens
STAFE Staphylococcus felis
STAFL Staphylococcus fleurettii
STAGA Staphylococcus gallinarum
STAHA Staphylococcus haemolyticus
STAHO Staphylococcus hominis
STAHOM Staphylococcus hominis hominis
STANOV Staphylococcus hominis novobiosepticus
STAHYI Staphylococcus hyicus
STACHR*1 Staphylococcus hyicus chromogenes
STAHYI*1 Staphylococcus hyicus hyicus
STAIN Staphylococcus intermedius
STAKLO Staphylococcus kloosii
STALE Staphylococcus lentus
STALU Staphylococcus lugdunensis
STALUTR Staphylococcus lutrae
STAMUS Staphylococcus muscae
STANEP Staphylococcus nepalensis
VEIPA*1 Staphylococcus parvulus
STAPAS Staphylococcus pasteuri
STAPETT Staphylococcus pettenkoferi
STAPIS Staphylococcus piscifermentans
STAPSEU Staphylococcus pseudintermedius
STAVIT*1 Staphylococcus pulvereri
STASL Staphylococcus saccharolyticus
STASA Staphylococcus saprophyticus
STASB Staphylococcus saprophyticus bovis
STASAP Staphylococcus saprophyticus saprophyticus
STASH Staphylococcus schleiferi
STACOA Staphylococcus schleiferi coagulans
STASCH Staphylococcus schleiferi schleiferi
STASC Staphylococcus sciuri
STASCN Staphylococcus sciuri carnaticus
STALE*1 Staphylococcus sciuri lentus
STASRO Staphylococcus sciuri rodentium
STASCU Staphylococcus scuiri scuiri
STASI Staphylococcus simulans
STASU Staphylococcus succinus
STASUC Staphylococcus succinus casei
STASUS Staphylococcus succinus succinus
STAVIT Staphylococcus vitulinus
STAWA Staphylococcus warneri
STAXY Staphylococcus xylosus
CNS Staphylococcus, coagulase negative
CPS Staphylococcus, coagulase positive
STEMSP Stemphylium
STESP Stenotrophomonas
STEMA Stenotrophomonas maltophilia
STEPSP Stephanoascus
STEPCIFE Stephanoascus ciferrii
ROTHMU*1 Stomatococcus mucilaginosus
STRBS Streptobacillus
STRBM Streptobacillus moniliformis
STR Streptococcus
STRVA Streptococcus acidominimus
GRADJ*1 Streptococcus adjacens
GBS Streptococcus agalactiae (group B streptococci)
STRALAC Streptococcus alactolyticus
STRANG*1 Streptococcus anginosis milleri group
STRVN Streptococcus anginosus
STRANG Streptococcus anginosus group
STRAC Streptococcus anginosus-constellatus
STRAUS Streptococcus australis
ENTA*1 Streptococcus avium
STRBOVI Streptococcus bovis group
STRCANI Streptococcus canis
STRGALL*1 Streptococcus caprinus
ENTCA*2 Streptococcus casseliflavus
ENTECECO*1 Streptococcus cecorum
STRVC Streptococcus constellatus
STRCC Streptococcus constellatus constellatus
STRCP Streptococcus constellatus pharyngis
STRCRC Streptococcus criceti
STRCR Streptococcus cristatus
STRDF*1 Streptococcus defectivus
STRDENT Streptococcus dentisani
STRD Streptococcus downei
ENTD*1 Streptococcus durans
STRDYS Streptococcus dysgalactiae
STRDEG Streptococcus dysgalactiae dysgalactiae
STRDEQ Streptococcus dysgalactiae equisimilis
GRANELEG*2 Streptococcus elegans
STRENT Streptococcus entericus
STREG Streptococcus equi
STREQ Streptococcus equi equi
STRZOO Streptococcus equi zooepidemicus
STRDE Streptococcus equinus
ENTFS*1 Streptococcus faecalis
ENTFM*1 Streptococcus faecium
STRF Streptococcus ferus
ENTGA*1 Streptococcus gallinarum
STRGALL Streptococcus gallolyticus
STRGALGAL Streptococcus gallolyticus gallolyticus
STRGALMAC Streptococcus gallolyticus macedonicus
STRGALPAS Streptococcus gallolyticus pasteurianus
LACTGARV*1 Streptococcus garviae
STRVG Streptococcus gordonii
RUMHAN*1 Streptococcus hansenii
STRHYOV Streptococcus hyovaginalis
STRINFA Streptococcus infantarius
STRLUTE*1 Streptococcus infantarius coli
STRINFINF Streptococcus infantarius infantarius
STRINF Streptococcus infantis
STRINI Streptococcus iniae
SVI Streptococcus intermedius
STRALAC*1 Streptococcus intestinalis
LACTLACT*1 Streptococcus lactis
STRLUTE Streptococcus lutetiensis
STRMACA Streptococcus macacae
STRANG*2 Streptococcus milleri group
STRVM Streptococcus mitis
STRMIT Streptococcus mitis group
GEMMO*1 Streptococcus morbillorum
STRVT Streptococcus mutans
STRMUG Streptococcus mutans group
STROLIG Streptococcus oligofermentans
STROR Streptococcus oralis
STROVIS Streptococcus ovis
STRPA Streptococcus parasanguinis
STRPARA Streptococcus parauberis
ATOPAR*2 Streptococcus parvulus
STRGALPAS*1 Streptococcus pasteurianus
STRPER Streptococcus peroris
STRPLUR Streptococcus pluranimalium
SP Streptococcus pneumoniae
STRPORC Streptococcus porcinus
BLAUPROD*3 Streptococcus productus
STRPSEU Streptococcus pseudopneumoniae
STRPSEUD Streptococcus pseudoporcinus
GAS Streptococcus pyogenes (group A streptococci)
STRRT Streptococcus ratti
ENTESACC*1 Streptococcus saccharolyticus
STRVS Streptococcus salivarius
STRSAG Streptococcus salivarius group
STRSLV Streptococcus salivarius salivarius
STRSAL Streptococcus salivarius thermophilus
SVS Streptococcus sanguinis
STRSG Streptococcus sanguinis group
STRINI*1 Streptococcus shiloi
STRSINE Streptococcus sinensis
STRSO Streptococcus sobrinus
STRSUIS Streptococcus suis
STRSAL*1 Streptococcus thermophilus
STRTIGU Streptococcus tigurinus
STRVU Streptococcus uberis
STRVE Streptococcus vestibularis
SC Streptococcus, group C
GDS Streptococcus, group D
GFS Streptococcus, group F
GGS Streptococcus, group G
STRESP Streptomyces
STREALBU Streptomyces albus
STREBIKI Streptomyces bikiniensis
STRECAND Streptomyces candidus
STREGRIS*1 Streptomyces caviscabies
STRECLAV Streptomyces clavuligerus
STREGRIS*3 Streptomyces erumpens
STREFILA Streptomyces filamentosus
STREGRIS Streptomyces griseus
STRELINC Streptomyces lincolnensis
STREFILA*1 Streptomyces roseosporus
STREGRIS*2 Streptomyces setonii
STRESOMA Streptomyces somaliensis
STRESPEC Streptomyces spectabilis
STRETHER Streptomyces thermovulgaris
STREVENE Streptomyces venezuelae
STRON Strongyloides
SUCCSP Succinivibrio
SUCCDEXT Succinivibrio dextrinosolvens
SUTTSP Sutterella
SUTTWADS Sutterella wadsworthensis
SUTSP Suttonella
SUTIND Suttonella indologenes
SYNCSP Syncephalastrum
SYNCRACE Syncephalastrum racemosum
TAENI Taenia
TALASP Talaromyces
PENIMARN*1 Talaromyces marneffei
TALARUBE Talaromyces ruber
POXTA Tanapox virus
TANNSP Tannerella
TANNFORS Tannerella forsythia
TATMAC*1 Tatlockia macaechernii
TATMIC*1 Tatlockia micdadei
TATSP Tatumella
TATPT Tatumella ptyseos
TETRSP Tetragenococcus
TETRHALO Tetragenococcus halophilus
TETRSOLI Tetragenococcus solitarius
THERSP Thermoactinomyces
TBE Tick-borne encephalitis virus
TISSP Tissierella
TISPR Tissierella praeacuta
TOGTU Togavirus
NEOSDIMI*3 Torula dimidiata
CANLIP*3 Torula lipolytica
CANUTI*2 Torula utilis
CANPARA*2 Torulopsis aggregata
CANHAE*1 Torulopsis haemulonii
CANINC*1 Torulopsis inconspicua
CANPIN*1 Torulopsis pintolopesii
CANUTI*3 Torulopsis utilis
CANUTI*4 Torulopsis utilis var utilis
TOXOC Toxocara
TOXO Toxoplasma
TOXOGOND Toxoplasma gondii
TRASP Trabulsiella
TRAGU Trabulsiella guamensis
TRESP Treponema
TRECA Treponema carateum
TREPALL Treponema pallidum
TRICN Trichinella
TRICSP Trichoderma
TRICVIRI Trichoderma viride
TRICH Trichomonas
TRICP Trichophyton
TRICS Trichosporon
TRIASA Trichosporon asahii
TRIBEI Trichosporon beigelii
TRIBEI*1 Trichosporon cutaneum
TRIBEI*2 Trichosporon giganteum
SARINK*1 Trichosporon inkin
TRILOUB Trichosporon loubieri
TRIMUC Trichosporon mucoides
TRIMYCO Trichosporon mycotoxinivorans
TRIOVOI Trichosporon ovoides
GEOTRKLEB*2 Trichosporon penicillatum
TRIPUL Trichosporon pullulans
TRICHSP Trichostrongylus
TRICHOSP Trichothecium
TRICU Trichuris
TROPSP Tropheryma
TROPWHIP Tropheryma whipplei
TRUESP Trueperella
TRUEBERN Trueperella bernardiae
ARCPY Trueperella pyogenes
TRYSP Trypanosoma
TRYBRU Trypanosoma brucei
TRYBRURHO Trypanosoma brucei rhodesiense
TRYCR Trypanosoma cruzi
TRYCR*3 Trypanosoma escomelis
TRYRANG Trypanosoma rangeli
TRYCR*2 Trypanosoma triatomae
TSUKSP Tsukamurella
TSUKINCH Tsukamurella inchonensis
TSUKPAUR Tsukamurella paurometabola
TSUKPULM Tsukamurella pulmonis
TSUKSTRA Tsukamurella strandjordii
TSUKTYRO Tsukamurella tyrosinosolvens
TURISP Turicella
TURIOTIT Turicella otitidis
TURICSP Turicibacter
TURISANG Turicibacter sanguinis
ULOCSP Ulocladium
URESP Ureaplasma
UREPARV Ureaplasma parvum
UREUR Ureaplasma urealyticum
USTISP Ustilago
POXVC Vaccinia virus
VAGOSP Vagococcus
VAGOFLUV Vagococcus fluvialis
ENTSP*2 Vancomycin resistant Enterococcus
ENTFS*2 Vancomycin resistant Enterococcus faecalis
ENTFM*2 Vancomycin resistant Enterococcus faecium
VARICELLO*1 Varicellavirus
VZ*1 Varicella-zoster virus
VARICELLO Varicellovirus
POXVR Variola virus
VEISP Veillonella
VEIPA*2 Veillonella alcalescens
VEIATYP Veillonella atypica
VEICAVI Veillonella caviae
VEICRIC Veillonella criceti
VEIDISP Veillonella dispar
VEIMONT Veillonella montpellierensis
VEIPA Veillonella parvula
VEIRATT Veillonella ratti
VEIRODE Veillonella rodentium
VEE Venezuelan equine encephalomyelitis virus
VERTSP Verticillium
VIBSP Vibrio
VIBAL Vibrio alginolyticus
VIBHAR*3 Vibrio carchariae
VCUN Vibrio cholerae
VIBCI Vibrio cincinnatiensis
PHODAM*1 Vibrio damsela
CAMFU*1 Vibrio fetus
VIBFL Vibrio fluvialis
VIBFU Vibrio furnissii
VIBHAR Vibrio harveyi
VIBME Vibrio metschnikovii
VIBMI Vibrio mimicus
VIBPA Vibrio parahaemolyticus
CAMSPUT*1 Vibrio sputorum
WOLSU*1 Vibrio succinogenes
VIBHAR*4 Vibrio trachuri
VIBVU Vibrio vulnificus
VIRSP Virgibacillus
VIRPAN Virgibacillus pantothenticus
SVU Viridans group streptococci
VIRUS Virus
WANGSP Wangiella
WANGDERM Wangiella dermatitidis
WAUTSP Wautersia
CUPRGILA*2 Wautersia gilardii
CUPRPAUC*1 Wautersia paucula
CUPRRESP*2 Wautersia respiaculi
WEESP Weeksella
WEEVI Weeksella virosa
BERZOO*1 Weeksella zoohelcum
WEISSP Weissella
WEISCONF Weissella confusa
WNV West Nile virus
WEE Western equine encephalomyelitis virus
WOLSP Wolinella
CAMCU*1 Wolinella curva
CAMRE*1 Wolinella recta
WOLSU Wolinella succinogenes
XANSP Xanthomonas
STEMA*4 Xanthomonas maltophilia
XENSP Xenorhabdus
XENLU*1 Xenorhabdus luminescens
XENNU Xenorhabdus nematophila
XMRV Xenotropic murine leukemia virus-related virus
YEAST Yeast
TOGYF Yellow fever virus
YERSP Yersinia
YERAL Yersinia aldovae
YERALEK Yersinia aleksiciae
YERBE Yersinia bercovieri
YEREN Yersinia enterocolitica
YERFR Yersinia frederiksenii
YERIN Yersinia intermedia
YERKR Yersinia kristensenii
YERMO Yersinia mollaretii
YERPE Yersinia pestis
YERPS Yersinia pseudotuberculosis
YERRO Yersinia rohdei
YERRU Yersinia ruckeri
YOKSP Yokenella
YOKRE Yokenella regensburgei
ZIKAVI Zika virus
CLOOR*1 Zymobacterium oroticum
e found when referencing the NHSN Organism List. DO NOT interpret the absence of an organism to mean the event
d on the NHSN Organism List, please contact us at nhsn@cdc.gov for guidance on appropriate reporting.

SNOMED Preferred Term

Abiotrophia
Granulicatella adiacens
Granulicatella adiacens
Abiotrophia defectiva
Granulicatella elegans
Acanthamoeba
Acholeplasma
Acholeplasma laidlawii
Acholeplasma oculi
Achromobacter
Achromobacter denitrificans
Achromobacter piechaudii
Achromobacter ruhlandii
Achromobacter xylosoxidans
Achromobacter xylosoxidans xylosoxidans
Acidaminococcus
Acidaminococcus fermentans
Acid-fast bacillus
Acidovorax
Acidovorax delafieldii
Acidovorax facilis
Acidovorax temperans
Acinetobacter
Acinetobacter baumannii
Acinetobacter calcoaceticus
Acinetobacter calcoaceticus-Acinetobacter baumannii complex
Acinetobacter haemolyticus
Acinetobacter johnsonii
Acinetobacter junii
Acinetobacter lwoffi
Acinetobacter nosocomialis
Acinetobacter pittii
Acinetobacter radioresistens
Acinetobacter schindleri
Acinetobacter ursingii
Pseudallescheria boydii
Scedosporium boydii
Acremonium
Acremonium alabamensis
Acremonium kiliense
Acremonium potroni
Acremonium potroni
Acremonium recifei
Acremonium strictum
Rhinocladiella aquaspersa
Actinobacillus
Aggregatibacter actinomycetemcomitans
Actinobacillus equuli
Actinobacillus hominis
Actinobacillus lignieresii
Actinobacillus suis
Actinobacillus ureae
Actinomyces meyeri
Actinobaculum
Actinobaculum massiliense
Actinotignum schaalii
Actinotignum urinale
Actinomadura
Actinomadura latina
Actinomadura madurae
Actinomadura pelletieri
Actinomyces
Trueperella bernardiae
Actinomyces bovis
Actinomyces cardiffensis
Actinomyces dentalis
Actinomyces europaeus
Actinomyces funkei
Actinomyces georgiae
Actinomyces gerencseriae
Actinomyces graevenitzii
Actinomyces hongkongensis
Actinomyces israelii
Actinomyces meyeri
Actinomyces naeslundii
Actinomyces nasicola
Actinomyces neuii
Actinomyces odontolyticus
Actinomyces oricola
Actinomyces oris
Trueperella pyogenes
Actinomyces radicidentis
Actinomyces radingae
Actinomyces turicensis
Actinomyces urogenitalis
Actinomyces viscosus
Actinotignum
Actinotignum schaalii
Actinotignum urinale
Aerobic bacteria
Aerococcus
Aerococcus christensenii
Aerococcus sanguinicola
Aerococcus urinae
Aerococcus urinaeequi
Aerococcus urinaehominis
Aerococcus viridans
Aeromonas
Aeromonas bestiarum
Aeromonas caviae
Aeromonas caviae complex
Aeromonas encheleia
Aeromonas trota
Aeromonas eucrenophilia
Aeromonas hydrophila
Aeromonas hydrophila complex
Aeromonas jandei
Aeromonas media
Aeromonas molluscorum
Aeromonas popoffii
Aeromonas caviae
Aeromonas salmonicida
Aeromonas schubertii
Aeromonas simiae
Aeromonas sobria
Aeromonas trota
Aeromonas veronii
Afipia
Afipia clevelandensis
Afipia felis
Aggregatibacter
Aggregatibacter actinomycetemcomitans
Aggregatibacter aphrophilus
Aggregatibacter segnis
Agrobacterium
Rhizobium radiobacter
Agromyces
Alcaligenes
Bordetella bronchiseptica
Alcaligenes faecalis
Alcaligenes faecalis
Achromobacter piechaudii
Achromobacter xylosoxidans
Alcaligenes xylosoxidans ss. xylosoxidans
Chrysosporium
Scedosporium apiospermum
Alishewanella
Alishewanella fetalis
Alistipes
Alistipes putredinis
Pseudallescheria boydii
Alloiococcus
Alloiococcus otitis
Genus Alloscardovia
Alloscardovia omnicolens
Alpha-hemolytic streptococcus
Alpha-hemolytic Streptococcus species not Streptococcus pneumoniae
Alternaria
Alternaria alternata
Alternaria dianthicola
Alternaria infectoria
Alternaria alternata
Alternaria tenuissima
Alysiella
Alysiella crassa
Amycolatopsis
Amycolatopsis orientalis
Anaerobe
Anaerobic Gram-negative bacillus
Anaerobic Gram negative coccobacillus
Anaerobic Gram-negative coccus
Anaerobic Gram-positive bacillus
Anaerobic Gram positive coccobacillus
Anaerobic Gram-positive coccus
Anaerobiospirillum
Anaerobiospirillum succinoproducens
Anaerobiospirillum thomasii
Anaerococcus
Anaerococcus hydrogenalis
Anaerococcus lactolyticus
Anaerococcus octavius
Anaerococcus prevotii
Anaerococcus tetradius
Anaerococcus vaginalis
Anaerorhabdus
Anaerorhabdus furcosus
Anaplasma
Ancylostoma
Aneurinibacillus
Aneurinibacillus aneurinilyticus
Angiostrongylus
Apophysomyces
Apophysomyces elegans
Aquabacterium
Aquabacterium parvum
Propionibacterium propionicum
Flavivirus
Arcanobacterium
Trueperella bernardiae
Arcanobacterium haemolyticum
Arcanobacterium pluranimalium
Trueperella pyogenes
Arcobacter
Arcobacter butzleri
Arcobacter nitrofigilis
Arenavirus
Arsenicicoccus
Arsenicicoccus bolidensis
Arthrobacter
Arthrobacter agilis
Arthrobacter albus
Arthrobacter arilaitensis
Arthrobacter astrocyaneus
Arthrobacter aurescens
Arthrobacter bergerei
Arthrobacter chlorophenolicus
Arthrobacter citreus
Arthrobacter creatinolyticus
Arthrobacter crystallopoietes
Arthrobacter cumminsii
Arthrobacter flavus
Arthrobacter gandavensis
Arthrobacter gangotriensis
Arthrobacter globiformis
Arthrobacter histidinolovorans
Arthrobacter ilicis
Arthrobacter kerguelensis
Arthrobacter koreensis
Arthrobacter luteolus
Arthrobacter methylotrophus
Arthrobacter mysorens
Arthrobacter nasiphocae
Arthrobacter nicotianae
Arthrobacter nicotinovorans
Arthrobacter nitroguajacolicus
Arthrobacter oryzae
Arthrobacter oxydans
Arthrobacter pascens
Arthrobacter polychromogenes
Arthrobacter protophormiae
Arthrobacter psychrolactophilus
Arthrobacter psychrophenolicus
Arthrobacter ramosus
Arthrobacter rhombi
Arthrobacter roseus
Arthrobacter russicus
Arthrobacter scleromae
Pseudomonas putida
Arthrobacter sulfonivorans
Arthrobacter sulfureus
Arthrobacter uratoxydans
Arthrobacter ureafaciens
Corynebacterium variabile
Arthrobacter viscosus
Arthrobacter woluwensis
Arthroderma
Arthrographis
Ascaris
Aspergillus
Aspergillus candidus
Aspergillus clavatus
Aspergillus deflectus
Aspergillus flavipes
Aspergillus flavus
Aspergillus fumigatus
Aspergillus glaucus
Aspergillus nidulans
Aspergillus niger
Aspergillus niveus
Aspergillus ochraceus
Aspergillus oryzae
Aspergillus parasiticus
Aspergillus restrictus
Aspergillus sydowii
Aspergillus terreus
Aspergillus ustus
Aspergillus versicolor
Aspergillus wentii
Astroviridae
Atopobium
Atopobium fossor
Atopobium minutum
Atopobium parvulum
Atopobium rimae
Atopobium vaginae
Aureimonas altamirensis
Aureimonas
Aureimonas altamirensis
Microbacterium liquefaciens
Aureobasidium
Aureobasidium pullulans
Genus Averyella
Azorhizobium
Azorhizobium caulinodans
Azospirillum
Azospirillum brasilense
Candida lipolytica
B19 virus
Babesia
Babesia microti
Bacillus
Bacillus aeolius
Bacillus aerius
Bacillus agaradhaerens
Brevibacillus agri
Bacillus alcalophilus
Bacillus algicola
Paenibacillus alvei
Bacillus amyloliquefaciens
Aneurinibacillus aneurinilyticus
Bacillus anthracis
Bacillus aquimaris
Bacillus arseniciselenatis
Bacillus asahii
Bacillus atrophaeus
Bacillus azotoformans
Bacillus badius
Bacillus barbaricus
Bacillus bataviensis
Bacillus benzoevorans
Bacillus boroniphilus
Brevibacillus brevis
Bacillus butanolivorans
Bacillus carboniphilus
Brevibacillus centrosporus
Bacillus cereus
Bacillus cereus group
Bacillus chittonlyticus
Bacillus circulans
Bacillus circulans group
Bacillus clarkii
Bacillus clausii
Bacillus coagulans
Bacillus cohnii
Bacillus decisifrondis
Bacillus decolorationis
Bacillus dipsosauri
Bacillus drentensis
Paenibacillus edaphicus
Bacillus ehimensis
Bacillus endophyticus
Bacillus farraginis
Bacillus fastidiosus
Bacillus firmus
Bacillus flexus
Bacillus fordii
Bacillus fortis
Bacillus fumarioli
Bacillus funiculus
Brevibacillus agri
Bacillus galactosidilyticus
Bacillus gelatini
Bacillus gibsonii
Bacillus ginsengi
Bacillus gornadae
Bacillus halmapalus
Bacillus halodenitrificans
Bacillus halodurans
Bacillus horikoshii
Bacillus horti
Bacillus humi
Bacillus hwajinpoensis
Bacillus idriensis
Bacillus indicus
Bacillus infantis
Bacillus infernus
Bacillus jeotgali
Bacillus kaustophilus
Bacillus korlensis
Bacillus krulwichiae
Sporolactobacillus laevolacticus
Paenibacillus larvae
Brevibacillus laterosporus
Paenibacillus lentimorbus
Bacillus lentus
Bacillus licheniformis
Bacillus luciferensis
Paenibacillus macerans
Bacillus macroides
Bacillus macyae
Bacillus marinus
Bacillus marisflavi
Bacillus massiliensis
Bacillus megaterium
Bacillus methanolicus
Bacillus mojavensis
Bacillus mucilaginosus
Bacillus muralis
Bacillus mycoides
Bacillus naganoensis
Bacillus nealsonii
Bacillus niacini
Bacillus novalis
Bacillus odysseyi
Bacillus okuhidensis
Bacillus oleronius
Paenibacillus pabuli
Bacillus pallidus
Virgibacillus pantothenticus
Brevibacillus parabrevis
Bacillus pasteurii
Bacillus patagoniensis
Bacillus pocheonensis
Paenibacillus polymyxa
Paenibacillus popilliae
Bacillus pseudalcaliphilus
Bacillus pseudofirmus
Bacillus pseudomycoides
Bacillus psychrophilus
Bacillus psychrosaccharolyticus
Bacillus pulvifaciens
Bacillus pumilus
Rummeliibacillus pycnus
Bacillus salexigens
Bacillus saliphilus
Bacillus selenitireducens
Bacillus shackletonii
Solibacillus silvestris
Bacillus simplex
Bacillus siralis
Bacillus smithii
Bacillus soli
Bacillus sonorensis
Bacillus sporothermodurans
Bacillus subterraneus
Bacillus subtilis
Bacillus subtilis group
Bacillus subtilis subspecies inaquosorum
Bacillus subtilis spizizenii
Bacillus subtilis subtilis
Bacillus tequilensis
Bacillus thermantarcticus
Bacillus thermoamylovorans
Bacillus thermocatenulatus
Bacillus thermocloacae
Geobacillus thermodenitrificans
Bacillus thermoglucosidasius
Paenibacillus thiaminolyticus
Bacillus thuringiensis
Bacillus tusciae
Paenibacillus validus
Bacillus vallismortis
Bacillus vedderi
Bacillus velezensis
Bacillus vietnamensis
Chromobacterium violaceum
Bacillus vireti
Bacillus weihenstephanensis
Bacillus species not Bacillus anthracis
Corynebacterium matruchotii
Bacteroides
Prevotella bivia
Prevotella buccae
Prevotella buccalis
Bacteroides caccae
Pseudoflavonifractor capillosus
Prevotella buccae
Clostridium clostridioforme
Bacteroides coagulans
Prevotella corporis
Prevotella denticola
Prevotella disiens
Parabacteroides distasonis
Bacteroides eggerthii
Porphyromonas endodontalis
Bacteroides fragilis
Bacteroides fragilis group
Anaerorhabdus furcosus
Porphyromonas gingivalis
Parabacteroides goldsteinii
Campylobacter gracilis
Prevotella heparinolytica
Megamonas hypermegale
Prevotella intermedia
Porphyromonas levii
Porphyromonas macacae
Bacteroides massiliensis
Prevotella melaninogenica
Parabacteroides merdae
Mitsuokella multacida
Dichelobacter nodosus
Bacteroides nordii
Capnocytophaga ochracea
Prevotella oralis
Prevotella oris
Prevotella oulorum
Bacteroides ovatus
Prevotella buccae
Tissierella praeacuta
Alistipes putredinis
Bacteroides pyogenes
Prevotella ruminicola
Porphyromonas macacae
Odoribacter splanchnicus
Bacteroides stercoris
Bacteroides pyogenes
Bacteroides pyogenes
Bacteroides thetaiotaomicron
Bacteroides uniformis
Campylobacter ureolyticus
Prevotella veroralis
Bacteroides vulgatus
Bacteroides zoogleoformans
Balantidium
Balneatrix
Balneatrix alpica
Bartonella
Bartonella bacilliformis
Bartonella clarridgeiae
Bartonella elizabethae
Bartonella henselae
Bartonella quintana
Bartonella vinsonii
Basidiobolus
Basidiobolus ranarum
Basidiobolus ranarum
Basidiobolus ranarum
Basidiobolus ranarum
Beauveria
Beauveria bassiana
Vibrio alginolyticus
Vibrio harveyi
Vibrio parahaemolyticus
Vibrio vulnificus
Bergeyella
Bergeyella zoohelcum
Beta-hemolytic streptococcus
Beta-hemolytic Streptococcus, group A
Beta-hemolytic streptococcus, non-Group A, non-Group B
Bifidobacterium
Bifidobacterium adolescentis
Bifidobacterium angulatum
Bifidobacterium dentium
Bifidobacterium bifidum
Bifidobacterium breve
Bifidobacterium catenulatum
Bifidobacterium dentium
Bifidobacterium dentium
Bifidobacterium gallicum
Bifidobacterium infantis
Bifidobacterium longum
Bifidobacterium pseudocatenulatum
Bifidobacterium scardovii
Bifidobacterium longum
Bilophila
Bilophila wadsworthia
Bipolaris
Bipolaris australiensis
Bipolaris hawaiiense
Bipolaris hawaiiense
Bipolaris spicifera
BK virus
Blastoschizomyces
Blautia
Blautia coccoides
Blautia hansenii
Blautia producta
Bocavirus
Pediculus humanus
Bordetella
Bordetella avium
Bordetella bronchiseptica
Bordetella hinzii
Bordetella holmesii
Bordetella parapertussis
Bordetella pertussis
Bordetella petrii
Bordetella trematum
Borrelia
Borrelia afzelii
Borrelia anserina
Borrelia burgdorferi
Borrelia caucasica
Borrelia coriaceae
Borrelia crocidurae
Borrelia duttonii
Borrelia duttonii
Borrelia garinii
Borrelia hermsii
Borrelia hispanica
Borrelia japonica
Borrelia lusitaniae
Borrelia mazzottii
Borrelia miyamotoi
Borrelia recurrentis
Borrelia recurrentis
Borrelia parkeri
Borrelia recurrentis
Borrelia tanukii
Borrelia theileri
Borrelia turicatae
Borrelia valaisiana
Borrelia venezuelensis
Lasiodiplodia
Lasiodiplodia theobromae
Brachybacterium
Brachybacterium muris
Bipolaris spicifera
Brachyspira
Brachyspira aalborgi
Brachyspira pilosicoli
Moraxella catarrhalis
Moraxella cuniculi
Moraxella ovis
Brevibacillus
Brevibacillus agri
Brevibacillus brevis
Brevibacillus centrosporus
Brevibacillus laterosporus
Brevibacillus parabrevis
Brevibacterium
Curtobacterium albidum
Corynebacterium ammoniagenes
Brevibacterium casei
Brevibacterium epidermidis
Microbacterium imperiale
Brevibacterium linens
Brevibacterium luteolum
Brevibacterium mcbrellneri
Microbacterium oxydans
Brevibacterium ravenspurgense
Brevibacterium sanguinis
Corynebacterium vitaeruminis
Brevundimonas
Brevundimonas diminuta
Brevundimonas vesicularis
Brucella
Brucella abortus
Brucella canis
Brucella melitensis
Brucella neotomae
Brucella ovis
Brucella suis
Budvicia
Budvicia aquatica
Bulleidia
Bulleidia extructa
Family Bunyaviridae
Burkholderia
Burkholderia ambifaria
Burkholderia anthina
Burkholderia arboris
Burkholderia cenocepacia
Burkholderia cepacia
Burkholderia cepacia complex
Burkholderia gladioli
Burkholderia contaminans
Burkholderia diffusa
Burkholderia dolosa
Paraburkholderia fungorum
Burkholderia gladioli
Burkholderia lata
Burkholderia latens
Burkholderia mallei
Burkholderia metallica
Burkholderia multivorans
Ralstonia pickettii
Burkholderia pseudomallei
Burkholderia pyrrocinia
Burkholderia stabilis
Burkholderia thailandensis
Burkholderia ubonensis
Burkholderia vietnamiensis
Buttiauxella
Buttiauxella agrestis
Buttiauxella brennerae
Buttiauxella ferragutiae
Buttiauxella gaviniae
Buttiauxella izardii
Buttiauxella noackiae
Buttiauxella warmboldiae
Eubacterium limosum
Butyricimonas
Butyricimonas virosa
Butyrivibrio
Butyrivibrio fibrisolvens
Butyrivibrio hungatei
Family Caliciviridae
California encephalitis virus
Calymmatobacterium
Klebsiella granulomatis
Campylobacter
Arcobacter butzleri
Helicobacter cinaedi
Campylobacter coli
Campylobacter concisus
Campylobacter curvus
Helicobacter fennelliae
Campylobacter fetus
Campylobacter fetus ss. fetus
Campylobacter jejuni
Campylobacter fetus ss. venerealis
Campylobacter gracilis
Campylobacter helveticus
Campylobacter hominis
Campylobacter hyointestinalis
Campylobacter insulaenigrae
Campylobacter jejuni
Campylobacter jejuni ss doylei
Campylobacter jejuni ss jejuni
Campylobacter lanienae
Campylobacter lari
Campylobacter lari
Campylobacter mucosalis
Helicobacter mustelae
Arcobacter nitrofigilis
Helicobacter pylori
Campylobacter rectus
Campylobacter showae
Campylobacter sputorum
Campylobacter sputorum ss. bubulus
Campylobacter mucosalis
Campylobacter sputorum ss. sputorum
Campylobacter upsaliensis
Campylobacter ureolyticus
Candida
Candida albicans
Candida stellatoidea
Candida auris
Candida bracarensis
Candida catenulata
Candida catenulata
Candida ciferrii
Candida dubliniensis
Candida duobushaemulonii
Cyberlindnera fabianii
Debaryomyces hansenii
Candida glabrata
Candida guilliermondii
Candida guilliermondii var membranaefaciens
Candida haemulonii
Candida inconspicua
Candida intermedia
Candida kefyr
Candida krusei
Candida lambica
Candida lipolytica
Candida lusitaniae
Candida metapsilosis
Candida nivariensis
Candida norvegensis
Candida lusitaniae
Candida orthopsilosis
Candida parapsilosis
Candida parapsilosis complex
Candida lusitaniae
Candida pararugosa
Candida pelliculosa
Candida pintolopesii
Candida pulcherrima
Candida catenulata
Candida rugosa
Candida sake
Candida pintolopesii
Candida stellatoidea
Candida stellimalicola
Candida tropicalis
Candida utilis
Candida vini
Candida viswanathii
Candida zeylanoides
Capnocytophaga
Capnocytophaga canimorsus
Capnocytophaga cynodegmi
Capnocytophaga gingivalis
Capnocytophaga granulosa
Capnocytophaga haemolytica
Capnocytophaga ochracea
Capnocytophaga sputigena
carbapenem resistant Acinetobacter
carbapenem resistant Enterobacter cloacae
carbapenem resistant Klebsiella pneumoniae
Cardiobacterium
Cardiobacterium hominis
Cardiobacterium valvarum
Catabacter
Catabacter hongkongensis
Catenibacterium
Catenibacterium mitsuokai
Catonella
Catonella morbi
Cedecea
Cedecea davisae
Cedecea lapagei
Cedecea neteri
Cellulomonas
Cellulosimicrobium cellulans
Cellulomonas hominis
Cellulomonas humilata
Cellulosimicrobium
Cellulosimicrobium cellulans
Centipeda
Centipeda periodontii
Acremonium
Acremonium kiliense
Acremonium potroni
Acremonium recifei
Acremonium strictum
Chaetomium
Chaetomium atrobrunneum
Chaetomium globosum
Chikungunya virus
Chilomastix
Chilomastix mesnili
Chlamydia
Chlamydophila pneumoniae
Chlamydophila psittaci
Chlamydia trachomatis
Chlamydophila
Chlamydophila abortus
Chlamydophila pneumoniae
Chlamydophila psittaci
Chromobacterium
Chromobacterium violaceum
Chromobacterium violaceum
Chryseobacterium
Chryseobacterium gleum
Chryseobacterium indologenes
Chryseomonas
Chryseomonas luteola
Chryseomonas luteola
Chrysosporium
Citrobacter
Citrobacter amalonaticus
Citrobacter braakii
Citrobacter koseri
Citrobacter farmeri
Citrobacter freundii
Citrobacter gillenii
Citrobacter koseri
Citrobacter murliniae
Citrobacter rodentium
Citrobacter sedlakii
Citrobacter werkmanii
Citrobacter youngae
Cladophialophora
Cladophialophora bantiana
Cladosporium
Cladosporium cladosporioides
Cladosporium herbarum
Cladosporium sphaerospermum
Exophiala werneckii
Clavispora
Clavispora lusitaniae
Genus Clostridioides
Clostridioides difficile
Clostridium
Clostridium sardiniense
Clostridium argentiense
Clostridium baratii
Clostridium baratii
Eubacterium barkeri
Clostridium bartlettii
Clostridium beijerinckii
Clostridium bifermentans
Clostridium bolteae
Clostridium botulinum
Clostridium butyricum
Clostridium cadaveris
Clostridium carnis
Clostridium celerecrescens
Clostridium clostridioforme
Clostridium cochlearium
Clostridium cocleatum
Clostridioides difficile
Clostridium disporicum
Clostridium fallax
Clostridium ghonii
Clostridium ghonii
Clostridium glycolicum
Clostridium haemolyticum
Clostridium hastiforme
Clostridium hathewayi
Clostridium histolyticum
Clostridium indolis
Clostridium innocuum
Clostridium intestinale
Clostridium irregulare
Clostridium irregulare
Clostridium cochlearium
Clostridium leptum
Clostridium limosum
Clostridium malenominatum
Clostridium novyi
Flavonifractor plautii
Clostridium oroticum
Clostridium baratii
Clostridium paraputrificum
Clostridium baratii
Clostridium perfringens
Clostridium fallax
Clostridium butyricum
Clostridium putrefaciens
Clostridium ramosum
Clostridium sardiniense
Clostridium septicum
Clostridium sordellii
Clostridium sphenoides
Clostridium spiroforme
Clostridium sporogenes
Clostridium sporosphaeroides
Clostridium subterminale
Clostridium symbiosum
Clostridium tertium
Clostridium tetani
Filifactor villosus
Clostridium species, not Clostridium perfringens
Cokeromyces
Cokeromyces recurvatus
Coliform bacteria
Collinsella
Collinsella aerofaciens
Collinsella intestinalis
Collinsella stercoris
Colorado tick fever virus
Comamonas
Delftia acidovorans
Comamonas aquatica
Comamonas kerstersii
Comamonas terrigena
Comamonas testosteroni
Conidiobolus
Conidiobolus coronatus
Conidiobolus incongruus
Coniothyrium
Orf virus
Orf virus
Coprococcus
Coprococcus eutactus
Corynebacterium
Corynebacterium accolens
Corynebacterium afermentans
Corynebacterium afermentans ss afermentans
Corynebacterium afermentans ss lipophilum
Corynebacterium ammoniagenes
Corynebacterium amycolatum
Corynebacterium appendicis
Corynebacterium aquilae
Corynebacterium argentoratense
Corynebacterium atypicum
Corynebacterium aurimucosum
Corynebacterium auris
Corynebacterium auriscanis
Corynebacterium beticola
Corynebacterium bovis
Corynebacterium callunae
Corynebacterium camporealensis
Corynebacterium capitovis
Corynebacterium casei
Corynebacterium caspium
Corynebacterium ciconiae
Corynebacterium confusum
Corynebacterium coyleae
Corynebacterium cystitidis
Corynebacterium diphtheriae
Corynebacterium durum
Corynebacterium efficiens
Rhodococcus equi
Corynebacterium falsenii
Rhodococcus fascians
Corynebacterium felinum
Corynebacterium flavescens
Corynebacterium striatum
Corynebacterium freneyi
Corynebacterium genitalium
Corynebacterium glaucum
Corynebacterium glucuronolyticum
Corynebacterium glutamicum
Corynebacterium halotolerans
Arcanobacterium haemolyticum
Corynebacterium hoagii
Corynebacterium pseudodiphtheriticum
Corynebacterium imitans
Corynebacterium jeikeium
Corynebacterium kroppenstedtii
Corynebacterium kutscheri
Corynebacterium glutamicum
Corynebacterium lipophiloflavum
Corynebacterium macginleyi
Corynebacterium manihot
Corynebacterium massiliense
Corynebacterium mastitidis
Corynebacterium matruchotii
Corynebacterium mediolanum
Corynebacterium minutissimum
Corynebacterium variabile
Corynebacterium mucifaciens
Corynebacterium murisepticum
Corynebacterium kutscheri
Corynebacterium mycetoides
Corynebacterium nephridii
Corynebacterium aurimucosum
Corynebacterium pseudotuberculosis
Tsukamurella paurometabola
Corynebacterium phocae
Corynebacterium pilosum
Corynebacterium propinquum
Corynebacterium pseudodiphtheriticum
Corynebacterium pseudogenitalium
Corynebacterium pseudotuberculosis
Corynebacterium pseudotuberculostearicum
Trueperella pyogenes
Corynebacterium pyruviciproducens
Corynebacterium renale
Corynebacterium resistens
Corynebacterium riegelii
Corynebacterium rubrum
Corynebacterium glucuronolyticum
Corynebacterium simulans
Corynebacterium singulare
Corynebacterium sphenisci
Corynebacterium spheniscorum
Corynebacterium striatum
Corynebacterium suicordis
Corynebacterium sundsvallense
Corynebacterium tenuis
Corynebacterium terpenotabidum
Corynebacterium testudinoris
Corynebacterium thomssenii
Corynebacterium tuberculostearicum
Corynebacterium tuscaniense
Corynebacterium ulcerans
Corynebacterium urealyticum
Corynebacterium ureicelerivorans
Corynebacterium variabile
Corynebacterium variabile
Corynebacterium viscosum
Corynebacterium vitaeruminis
Corynebacterium vitaeruminis
Corynebacterium vitaeruminis
Corynebacterium xerosis
Corynebacterium species, not Corynebacterium diphtheriae
Corynebacterium species not Corynebacterium jeikeium
Toxigenic Corynebacterium
Coryneform bacteria
Coxiella
Coxiella burnetii
Creutzfeldt-Jakob agent
Crimean-Congo hemorrhagic fever virus
Cronobacter
Cronobacter dublinensis
Cronobacter malonaticus
Cronobacter muytjensii
Cronobacter sakazakii
Cronobacter turicensis
Cryptobacterium
Cryptobacterium curtum
Candida pararugosa
Candida utilis
Cryptosporidium
Cryptosporidium hominis
Cryptosporidium parvum
Cunninghamella
Cunninghamella bertholletiae
Cupriavidus
Cupriavidus basilensis
Cupriavidus gilardii
Cupriavidus metallidurans
Cupriavidus necator
Cupriavidus pauculus
Cupriavidus respiraculi
Curtobacterium
Curtobacterium albidum
Curvularia
Curvularia geniculata
Curvularia lunata
Bipolaris spicifera
Bipolaris spicifera
Cutibacterium
Cutibacterium acnes
Cyberlindnera fabianii
Cyclospora
Cyclospora cayetanensis
Cysticercus
Pedobacter heparinus
Ochroconis constricta
Ochroconis gallopava
Debaryomyces
Debaryomyces hansenii
Schwanniomyces polymorphus
Deinococcus
Delftia
Delftia acidovorans
Hepatitis D virus
Dengue virus
Dermabacter
Dermabacter hominis
Dermacoccus
Dermacoccus nishinomiyaensis
Dermatophilus
Dermatophilus congolensis
Dermatophilus congolensis
Desulfomonas
Desulfovibrio
Desulfovibrio desulfuricans
Desulfovibrio piger
Desulfovibrio vulgaris
Dialister
Dialister micraerophilus
Dialister pneumosintes
Diphyllobothrium
Dichelobacter
Dichelobacter nodosus
Dientamoeba
Dientamoeba fragilis
Dietzia
Dietzia cinnamea
Diphtheroids
Aerobic diphtheroids
Anaerobic diphtheroids
Diphyllobothrium
Dipylidium
Dolosicoccus
Dolosicoccus paucivorans
Dolosigranulum
Dolosigranulum pigrum
Dorea
Dorea formicigenerans
Dorea longicatena
Drechslera
Bipolaris australiensis
Exserohilum rostratum
Bipolaris hawaiiense
Exserohilum rostratum
Bipolaris spicifera
Dyella
Dysgonomonas
Dysgonomonas capnocytophagoides
Dysgonomonas gadei
Eastern equine encephalitis virus
Ebolavirus
Echinococcus
Measles virus
Edwardsiella
Edwardsiella tarda
Edwardsiella hoshinae
Edwardsiella ictaluri
Edwardsiella tarda
Ascaris
Eggerthella
Eggerthella lenta
Eggerthella sinesis
Eggerthia
Eggerthia catenaformis
Ehrlichia
Eikenella
Eikenella corrodens
Elizabethkingia
Elizabethkingia meningoseptica
Chrysosporium
Empedobacter
Empedobacter brevis
Endolimax
Endolimax nana
Entamoeba
Entamoeba coli
Entamoeba dispar
Entamoeba gingivalis
Entamoeba hartmanni
Entamoeba histolytica
Entamoeba histolytica/Entamoeba dispar complex
Entamoeba polecki
Enterobacter
Klebsiella aerogenes
Pantoea agglomerans
Pantoea agglomerans
Enterobacter amnigenus
Enterobacter asburiae
Enterobacter cancerogenus
Enterobacter cloacae
Enterobacter cloacae complex
Enterobacter cloacae subspecies dissolvens
Kosakonia cowanii
Enterobacter cloacae subspecies dissolvens
Pluralibacter gergoviae
Hafnia alvei
Enterobacter hormaechei
Kluyvera intermedia
Enterobacter kobei
Serratia liquefaciens
Enterobacter ludwigii
Lelliottia nimipressuralis
Pluralibacter pyrinus
Enterobacteriaceae
Enterobius
Genus Enterococcus
Enterococcus asini
Enterococcus avium
Enterococcus canis
Enterococcus casseliflavus
Enterococcus cecorum
Enterococcus dispar
Enterococcus durans
Enterococcus faecalis
Enterococcus faecium
Enterococcus casseliflavus
Enterococcus gallinarum
Enterococcus gilvus
Enterococcus haemoperoxidus
Enterococcus hermanniensis
Enterococcus hirae
Enterococcus italicus
Enterococcus malodoratus
Enterococcus moraviensis
Enterococcus mundtii
Enterococcus pallens
Enterococcus phoeniculicola
Enterococcus pseudoavium
Enterococcus raffinosus
Enterococcus ratti
Enterococcus saccharolyticus
Enterococcus italicus
Lactococcus garvieae
Tetragenococcus solitarius
Enterococcus sulfureus
Enterococcus villorum
Enterocytozoon
EHEC, serotype O157:H7
Enteromonas
Enteromonas hominis
Enteropathogenic Escherichia coli
Genus Enterovirus
hepatitis A virus
Conidiobolus
Conidiobolus coronatus
Epicoccum
Epidermophyton
Human herpesvirus 4
Erwinia
Pantoea ananatis
Enterobacter cancerogenus
Enterobacter cloacae subspecies dissolvens
Pantoea agglomerans
Lelliottia nimipressuralis
Erwinia persicina
Pantoea ananatis
Erysipelothrix
Erysipelothrix inopinata
Erysipelothrix rhusiopathiae
Erysipelothrix rhusiopathiae
Erysipelothrix tonsillarum
Escherichia
Leclercia adecarboxylata
Escherichia albertii
Escherichia coli
Escherichia fergusonii
Escherichia hermannii
Escherichia vulneris
Eubacterium
Collinsella aerofaciens
Pseudoramibacter alactolyticus
Eubacterium barkeri
Eubacterium biforme
Eubacterium brachy
Eubacterium budayi
Eubacterium budayi
Eubacterium callanderi
Eubacterium combesii
Eubacterium contortum
Eubacterium cylindroides
Eubacterium dolichum
Eubacterium eligens
Slackia exigua
Atopobium fossor
Eubacterium hadrum
Eubacterium hallii
Eubacterium infirmum
Eggerthella lenta
Eubacterium limosum
Eubacterium minutum
Eubacterium moniliforme
Eubacterium nitrogenes
Eubacterium nodatum
Flavonifractor plautii
Eubacterium ramulus
Eubacterium rectale
Eubacterium saburreum
Eubacterium saphenum
Eubacterium siraeum
Eubacterium sulci
Eubacterium tenue
Mogibacterium timidum
Eubacterium ventriosum
Eubacterium yurii
Ewingella
Ewingella americana
Exiguobacterium
Exiguobacterium acetylicum
Exophiala
Exophiala bergeri
Wangiella dermatitidis
Exophiala jeanselmei
Exophiala spinifera
Exophiala werneckii
Exserohilum
Exserohilum rostratum
ESBL Citrobacter freundii

ESBL Enterobacter cloacae

ESBL Escherichia coli

Extended spectrum beta-lactamase producing Klebsiella oxytoca

ESBL Klebsiella pneumoniae

ESBL Proteus mirabilis

ESBL Shigella sonnei
Facklamia
Facklamia hominis
Facklamia ignava
Facklamia languida
Facklamia sourekii
Facklamia tabacinasalis
Faecalibacterium
Faecalibacterium prausnitzii
Mobiluncus mulieris
Mobiluncus curtisii
Genus Filifactor
Filifactor alocis
Filifactor villosus
Finegoldia
Finegoldia magna
Sarcinosporon inkin
Pseudomonas oryzihabitans
Flavivirus
Flavobacterium
Microbacterium arborescens
Chryseobacterium indologenes
Empedobacter brevis
Flavobacterium devorans
Chryseobacterium gleum
Pedobacter heparinus
Chryseobacterium indologenes
Microbacterium maritypicum
Microbacterium maritypicum
Elizabethkingia meningoseptica
Flavobacterium mitzutaii
Sphingobacterium multivorum
Myroides odoratus
Sphingomonas paucimobilis
Sphingobacterium spiritivorum
Sphingobacterium thalpophilum
Sphingobacterium spiritivorum
Flavonifractor
Flavonifractor plautii
Fluoribacter
Legionella bozemanae
Legionella dumoffii
Legionella gormanii
Fonsecaea
Fonsecaea compacta
Fonsecaea compacta
Wangiella dermatitidis
Fonsecaea pedrosoi
Francisella
Francisella tularensis
Fungi
Fusarium
Fusarium chlamydosporum
Fusarium culmorum
Fusarium dimerum
Fusarium graminearum
Fusarium solani
Fusarium proliferatum
Fusarium oxysporum
Fusarium poae
Fusarium proliferatum
Fusarium graminearum
Fusarium semitectum
Fusarium solani
Fusarium sporotrichioides
Fusarium tricintum
Fusarium tricintum
Fusarium verticillioides
Neoscytalidium dimidiatum
Fusobacterium
Filifactor alocis
Fusobacterium canifelinum
Fusobacterium equinum
Fusobacterium gonidiaformans
Fusobacterium mortiferum
Fusobacterium naviforme
Fusobacterium necrogenes
Fusobacterium necrophorum
Fusobacterium necrophorum ss fundiliforme
Fusobacterium necrophorum ss necrophorum
Fusobacterium nucleatum
Fusobacterium nucleatum ss fusiforme
Fusobacterium nucleatum ss nucleatum
Fusobacterium nucleatum ss polymorphum
Fusobacterium periodonticum
Flavonifractor plautii
Fusobacterium nucleatum ss polymorphum
Faecalibacterium prausnitzii
Fusobacterium russii
Eubacterium sulci
Fusobacterium ulcerans
Fusobacterium varium
Gallicola
Gallicola barnesae
gamma-hemolytic streptococcus
Gardnerella
Gardnerella vaginalis
Gemella
Gemella bergeriae
Gemella haemolysans
Gemella morbillorum
Gemella sanguinis
Geobacillus
Geobacillus stearothermophilus
Geobacillus thermodenitrificans
Geobacillus thermoglucosidasius
Geotrichum
Geotrichum candidum
Geotrichum klebahnii
Geotrichum klebahnii
Rubella virus
Giardia
Giardia lamblia
Giardia lamblia
Giardia lamblia
Chrysosporium
Gliocladium
Globicatella
Globicatella sanguinis
Globicatella sulfidifaciens
Gordonia
Gordonia bronchialis
Gordonia otitidis
Gordonia polyisoprenivorans
Gordonia rubripertincta
Gordonia rubripertincta
Gordonia sputi
Gordonia terrae
Gram-negative bacillus
Fermentative Gram-negative bacillus
Non-fermentative Gram-negative bacillus
Gram-negative coccobacillus
Gram-negative coccus
Gram-negative diplococcus
Gram-negative pleomorphic bacillus
Gram-positive bacillus
Gram positive coccobacillus
Gram-positive coccus
Gram-positive diplococcus
Gram-variable bacillus
Gram-variable coccobacillus
Gram-variable coccus
Granulicatella
Granulicatella adiacens
Granulicatella elegans
Graphium
Grimontia
Grimontia hollisae
Haemophilus
Aggregatibacter actinomycetemcomitans
Haemophilus aegyptius
Aggregatibacter aphrophilus
Haemophilus haemoglobinophilus
Haemophilus ducreyi
Haemophilus haemoglobinophilus
Haemophilus haemolyticus
Haemophilus influenzae
Haemophilus parahaemolyticus
Haemophilus parainfluenzae
Haemophilus pittmaniae
Aggregatibacter segnis
Hafnia
Hafnia alvei
Halomonas
Halomonas venusta
Pichia angusta
Pichia anomala
Cyberlindnera fabianii
Ogataea polymorpha
Hartmannella
Helcococcus
Helcococcus kunzii
Helcococcus sueciensis
Helicobacter
Helicobacter acinonychis
Helicobacter acinonychis
Helicobacter aurati
Helicobacter bilis
Helicobacter bizzozeroni
Helicobacter canadensis
Helicobacter canis
Helicobacter cholecystus
Helicobacter cinaedi
Helicobacter felis
Helicobacter fennelliae
Helicobacter ganmani
Helicobacter hepaticus
Helicobacter mesocricetorum
Helicobacter muridarum
Helicobacter mustelae
Helicobacter pylori
Helicobacter pametensis
Helicobacter pullorum
Helicobacter pylori
Helicobacter rappini
Helicobacter rodentium
Helicobacter salomonis
Helicobacter trogontum
Helicobacter typhlonius
Helminthosporium
Bipolaris australiensis
Exserohilum rostratum
Bipolaris hawaiiense
Exserohilum rostratum
Bipolaris spicifera
Bordetella pertussis
hepatitis A virus
hepatitis B virus
hepatitis C virus
Hepatitis D virus
Hepatitis E virus
Hepatitis G virus
Herbaspirillum
Family Herpesviridae
Human herpes simplex virus
Heterophyes
Heterophyes heterophyes
Holdemania
Holdemania filiformis
Wangiella dermatitidis
Cladosporium
Wangiella dermatitidis
Hormonema
Hormonema dermatoides
Exophiala werneckii
Human cytomegalovirus 5
Human adenovirus
Human coronavirus
Human coxsackievirus
Human coxsackievirus A
Human coxsackievirus B
Human cytomegalovirus 5
Human echovirus
Human herpes simplex virus
Human herpes simplex virus type 1
Human herpes simplex virus type 2
Human herpesvirus 3
Human herpesvirus 4
human herpesvirus 6
human herpesvirus 8
Human immunodeficiency virus type 2
Human immunodeficiency virus type I
Human metapneumovirus
Human papillomavirus
human parainfluenza viruses
human poliovirus
Human respiratory syncytial virus
Human rhinovirus
Human T-lymphotropic virus 1
Human T-lymphotropic virus 2
Taenia
Hymenolepis
Ignavigranum
Ignavigranum ruoffiae
Influenza A virus
Influenza A virus subtype H1N1
Influenza B virus
Influenza C virus
Influenza virus
Inquilinus
Inquilinus limosus
Isospora
Janibacter
Janibacter hoylei
JC virus
Jonesia
Jonesia denitrificans
Kerstersia
Kerstersia gyiorum
Kingella
Kingella denitrificans
Suttonella indologenes
Kingella kingae
Kingella oralis
Kingella potus
Klebsiella
Klebsiella aerogenes
Klebsiella granulomatis
Raoultella ornithinolytica
Klebsiella oxytoca
Klebsiella pneumoniae ss. ozaenae
Raoultella planticola
Klebsiella pneumoniae
Klebsiella pneumoniae ss. ozaenae
Klebsiella pneumoniae ss. pneumoniae
Klebsiella pneumoniae ss. rhinoscleromatis
Klebsiella pneumoniae ss. rhinoscleromatis
Klebsiella singaporensis
Raoultella terrigena
Raoultella planticola
Klebsiella variicola
Kloeckera
Kluyvera
Kluyvera ascorbata
Kluyvera cryocrescens
Kluyvera georgiana
Kluyvera intermedia
Kluyveromyces
Kluyveromyces marxianus
Kluyveromyces lactis
Kluyveromyces marxianus
Kocuria
Kocuria rosea
Kocuria kristinae
Kocuria rosea
Kocuria varians
Kodamaea
Kodamaea ohmeri
Kosakonia
Kosakonia cowanii
Yokenella regensburgei
Kroppenstedtia
Kroppenstedtia eburnea
Kurthia
Kurthia bessoni
Kytococcus
Kytococcus sedentarius
Lachancea
Lachancea fermentati
Genus Lachnoanaerobaculum
Lachnoanaerobaculum orale
Lactobacillus
Lactobacillus acidophilus
Lactobacillus amylovorus
Lactobacillus antri
Lactobacillus plantarum
Lactobacillus brevis
Lactobacillus buchneri
Lactobacillus casei
Eggerthia catenaformis
Lactobacillus fermentum
Weissella confusa
Lactobacillus crispatus
Lactobacillus delbrueckii
Lactobacillus fermentum
Lactobacillus gasseri
Lactobacillus gastricus
Lactobacillus iners
Lactobacillus jensenii
Lactobacillus johnsonii
Lactobacillus kalixensis
Atopobium minutum
Lactobacillus oris
Lactobacillus paracasei
Lactobacillus plantarum
Lactobacillus reuteri
Lactobacillus rhamnosus
Atopobium rimae
Lactobacillus sakei
Lactobacillus salivarius
Lactobacillus ultunensis
Lactobacillus vaginalis
Lactobacillus vitulinus
Lactococcus
Lactococcus garvieae
Lactococcus lactis
Lasiodiplodia
Lasiodiplodia theobromae
Lassa virus
Leclercia
Leclercia adecarboxylata
Lecythophora
Lecythophora hoffmannii
Lecythophora mutabilis
Legionella
Legionella adelaidensis
Legionella anisa
Legionella beliardensis
Legionella birminghamensis
Legionella bozemanae
Legionella brunensis
Legionella busanensis
Legionella cherrii
Legionella cincinnatiensis
Legionella drancourtii
Legionella drozanskii
Legionella dumoffii
Legionella erythra
Legionella fairfieldensis
Legionella fallonii
Legionella feeleii
Legionella geestiana
Legionella gormanii
Legionella hackeliae
Legionella israelensis
Legionella janestowniensis
Legionella jordanis
Legionella lansingensis
Legionella londiniensis
Legionella longbeachae
Legionella lytica
Legionella maceachernii
Legionella micdadei
Legionella moravica
Legionella nautarum
Legionella oakridgensis
Legionella parisiensis
Legionella micdadei
Legionella pneumophila
Legionella quateirensis
Legionella quinlivanii
Legionella rowbothamii
Legionella rubrilucens
Legionella sainthelens
Legionella santicrucis
Legionella shakespearei
Legionella spiritensis
Legionella steigerwaltii
Legionella taurinensis
Legionella tucsonensis
Legionella wadsworthii
Legionella waltersii
Legionella worsleiensis
Leifsonia
Leifsonia aquatica
Leifsonia xyli
Leishmania
Lelliottia
Enterobacter amnigenus
Lelliottia nimipressuralis
Leminorella
Leminorella grimontii
Leminorella richardii
Leptosphaeria
Leptosphaeria senegalensis
Leptosphaeria tompkinsii
Leptospira
Leptospira interrogans
Leptotrichia
Eubacterium saburreum
Leptotrichia buccalis
Leptotrichia goodfellowii
Leptotrichia trevisanii
Leptotrichia wadei
Leuconostoc
Leuconostoc citreum
Leuconostoc citreum
Leuconostoc lactis
Leuconostoc mesenteroides
Leuconostoc pseudomesenteroides
Citrobacter amalonaticus
Citrobacter koseri
Listeria
Jonesia denitrificans
Listeria grayi
Listeria innocua
Listeria ivanovii
Listeria monocytogenes
Listeria seeligeri
Listeria welshimeri
Listonella
Loboa
Lodderomyces
Lodderomyces elongisporus
Vibrio harveyi
Lymphocytic choriomeningitis virus
Macrococcus
Macrococcus bovicus
Macrococcus carouselicus
Macrococcus caseolyticus
Macrococcus equipercicus
Alternaria
Madurella
Madurella grisea
Madurella mycetomatis
Madurella mycetomatis
Malassezia
Malassezia furfur
Malassezia globosa
Malassezia furfur
Malassezia pachydermatis
Malassezia restricta
Malassezia sympodialis
Malbranchea
Mannheimia
Mannheimia haemolytica
Marburgvirus
Massilia
Massilia timonae
Mastadenovirus
Measles virus
Megamonas
Megamonas hypermegale
Megamonas hypermegale
Megasphaera
Megasphaera elsdenii
Metarhizium
Metarhizium anisopliae
methicillin resistant Staphylococcus aureus
Methylobacterium
Methylobacterium mesophilicum
Methylobacterium zatmanii
Meyerozyma
Meyerozyma guilliermondii
Microbacterium
Microbacterium arborescens
Microbacterium hydrocarbonoxydans
Microbacterium imperiale
Microbacterium lacticum
Microbacterium liquefaciens
Microbacterium maritypicum
Microbacterium oxydans
Microbacterium paraoxydans
Microbacterium resistens
Micrococcus
Micrococcus antarcticus
Micrococcus luteus
Nesterenkonia halobia
Kocuria kristinae
Micrococcus luteus
Micrococcus lylae
Micrococcus luteus
Peptococcus niger
Micrococcus nishinomiyaensis
Kocuria rosea
Kytococcus sedentarius
Micromonospora
Micromonospora chalcea
Nocardia brevicatena
Microsporidium
Microsporum
Sarcinosporon inkin
Mitsuokella
Prevotella dentalis
Mitsuokella multacida
Mobiluncus
Mobiluncus curtisii
Mobiluncus mulieris
Moellerella
Moellerella wisconsensis
Mogibacterium
Mogibacterium diversum
Mogibacterium neglectum
Mogibacterium timidum
Mogibacterium vescum
Mold
Molluscum contagiosum virus
Monkeypox virus
Scedosporium apiospermum
Moraxella
Riemerella anatipestifer
Moraxella atlantae
Moraxella boevrei
Moraxella bovis
Moraxella canis
Moraxella caprae
Moraxella catarrhalis
Moraxella cuniculi
Kingella kingae
Kingella kingae
Moraxella lacunata
Moraxella lincolnii
Moraxella lacunata
Moraxella nonliquefaciens
Moraxella oblonga
Moraxella osloensis
Moraxella ovis
Psychrobacter phenylpyruvicus
Oligella urethralis
Genus Morbillivirus
Morganella
Morganella morganii
Morganella morganii subsp sibonii
Mortierella
Mortierella wolfii
Mucor
Mucor circinelloides
Mucor hiemalis
Mucor circinelloides
Mucor circinelloides
Rhizomucor pusillus
Mucor racemosus
Mucor ramosissimus
Mucor rouxianus
multidrug resistant Achromobacter xylosoxidans
multidrug resistant Acinetobacter
multidrug resistant Enterobacter asburiae
multidrug resistant Klebsiella pneumoniae
multidrug resistant Morganella morganii
multidrug resistant Pseudomonas aeruginosa
multiple drug-resistant Enterobacter cloacae
multiple drug-resistant Proteus mirabilis
Mumps virus
Mycelia sterilia
Mycobacterium
Mycobacterium abscessus
Mycobacterium africanum
Mycobacterium agri
Mycobacterium aichiense
Mycobacterium alvei
Mycobacterium gordonae
Mycobacterium asiaticum
Mycobacterium aurum
Mycobacterium austroafricanum
Mycobacterium avium
Mycobacterium, avium-intracellulare group
Mycobacterium marinum
Mycobacterium boenickei
Mycobacterium bohemicum
Mycobacterium bovis
Mycobacterium branderi
Mycobacterium brisbanense
Mycobacterium brumae
Mycobacterium intracellulare
Mycobacterium canariasense
Mycobacterium canetti
Mycobacterium caprae
Mycobacterium celatum
Mycobacterium chelonae
Mycobacterium chesapeaki
Mycobacterium chitae
Mycobacterium chlorophenolicus chlorophenolicum
Mycobacterium chubuense
Mycobacterium confluentis
Mycobacterium conspicuum
Mycobacterium cookii
Mycobacterium cosmeticum
Mycobacterium diernhoferi
Mycobacterium doricum
Mycobacterium duvalii
Mycobacterium elephantis
Mycobacterium fallax
Mycobacterium farcinogenes
Mycobacterium flavescens
Mycobacterium fortuitum
Mycobacterium fortuitum complex
Mycobacterium fortuitum complex
Mycobacterium frederiksbergense
Mycobacterium gadium
Mycobacterium gastri
Mycobacterium genavense
Mycobacterium fortuitum
Mycobacterium gilvum
Mycobacterium goodii
Mycobacterium gordonae
Mycobacterium simiae
Mycobacterium haemophilum
Mycobacterium hassiacum
Mycobacterium heckeshornense
Mycobacterium heidelbergense
Mycobacterium hiberniae
Mycobacterium hodleri
Mycobacterium holsaticum
Mycobacterium houstonense
Mycobacterium immunogenum
Mycobacterium interjectum
Mycobacterium intermedium
Mycobacterium intracellulare
Mycobacterium paratuberculosis
Mycobacterium kansasii
Mycobacterium komossence
Mycobacterium kubicae
Mycobacterium lacticola
Mycobacterium lacus
Mycobacterium lentiflavum
Mycobacterium leprae
Mycobacterium kansasii
Mycobacterium madagascariense
Mycobacterium mageritense
Mycobacterium malmoense
Mycobacterium marinum
Mycobacterium microti
Mycobacterium fortuitum
Mycobacterium montefiorense
Mycobacterium moriokaense
Mycobacterium mucogenicum
Mycobacterium murale
Mycobacterium neoaurum
Mycobacterium neworleansense
Mycobacterium nonchromogenicum
Mycobacterium novocastrense
Mycobacterium obuense
Mycobacterium palustre
Mycobacterium parafortuitum
Mycobacterium parascrofulaceum
Mycobacterium paratuberculosis
Mycobacterium parmense
Mycobacterium peregrinum
Mycobacterium phlei
Mycobacterium phocaicum
Mycobacterium pinnipedii
Mycobacterium marinum
Mycobacterium porcinum
Mycobacterium psychrotolerans
Mycobacterium rhodesiae
Mycobacterium scrofulaceum
Mycobacterium septicum
Mycobacterium sherrisii
Mycobacterium shimoidei
Mycobacterium shottsii
Mycobacterium simiae
Mycobacterium smegmatis
Mycobacterium sphagni
Mycobacterium szulgai
Mycobacterium terrae
Mycobacterium terrae complex
Mycobacterium thermoresistibile
Mycobacterium tokaiense
Mycobacterium triplex
Mycobacterium triviale
Mycobacterium tuberculosis
Mycobacterium tuberculosis complex
Mycobacterium tusciae
Mycobacterium ulcerans
Mycobacterium vaccae
Mycobacterium vanbaalenii
Mycobacterium wolinskyi
Mycobacterium xenopi
Mycobacterium, avium-intracellulare group
Genus Mycoplasma
Mycoplasma buccale
Mycoplasma faucium
Mycoplasma fermentans
Mycoplasma genitalium
Mycoplasma hominis
Mycoplasma fermentans
Mycoplasma lipophilum
Mycoplasma orale
Mycoplasma penetrans
Mycoplasma pirum
Mycoplasma pneumoniae
Mycoplasma primatum
Mycoplasma salivarium
Mycoplasma spermatophilum
Candida lipolytica
Myroides
Myroides odoratus
Naegleria
Pichia
Arthroderma
Necator
Neisseria
Neisseria canis
Moraxella catarrhalis
Neisseria cinerea
Moraxella cuniculi
Neisseria dentiae
Neisseria elongata
Neisseria elongata ss. elongata
Neisseria elongata ss. glycolytica
Neisseria elongata ss nitroreducens
Neisseria flavescens
Neisseria gonorrhoeae
Neisseria iguanae
Neisseria lactamica
Neisseria macacae
Neisseria meningitidis
Neisseria mucosa
Neisseria oralis
Moraxella ovis
Neisseria weaveri
Neisseria perflava
Neisseria polysaccharea
Neisseria sicca
Neisseria subflava
Neisseria weaveri
Neorickettsia
Neorickettsia sennetsu
Neosartorya
Neosartorya fischeri
Neoscytalidium dimidiatum
Nesterenkonia
Nesterenkonia halobia
Nigrospora
Nocardia
Nocardia abscessus
Nocardia africana
Nocardia anaemiae
Nocardia aobensis
Nocardia araoensis
Nocardia arthritidis
Nocardia asiatica
Nocardia asteroides
Nocardia asteroides complex
Nocardia beijingensis
Nocardia brasiliensis
Nocardia brevicatena
Nocardia carnea
Nocardia otitidis caviarum
Nocardia cyriacigeorgica
Nocardia elegans
Nocardia farcinica
Nocardia higoensis
Nocardia inohanensis
Nocardia kruczakiae
Nocardia mexicana
Nocardia niigatensis
Nocardia nova
Amycolatopsis orientalis
Nocardia otitidis caviarum
Nocardia otitidis caviarum
Nocardia paucivorans
Nocardia pneumoniae
Nocardia pseudobrasiliensis
Nocardia sienata
Nocardia testacea
Nocardia transvalensis
Nocardia veterana
Nocardia yamanashiensis
Nocardiopsis
Nocardiopsis dassonvillei
Nocardiopsis synnemataformans
Norovirus
Norwalk virus
Nutritionally variant streptococci
Obesumbacterium
Obesumbacterium proteus
Ochrobactrum
Ochrobactrum anthropi
Ochrobactrum intermedium
Ochroconis
Ochroconis constricta
Ochroconis gallopava
Ochroconis gallopava
Scolecobasidium humicola
Odoribacter
Odoribacter splanchnicus
Oerskovia
Ogataea
Pichia angusta
Ogataea polymorpha
Arthrographis
Oligella
Oligella ureolytica
Oligella urethralis
Geotrichum candidum
Genus Orbivirus
Orf virus
Orientia
Orientia tsutsugamushi
Orthoreovirus
Paecilomyces
Paecilomyces javanicus
Paecilomyces lilacinus
Paecilomyces marquandii
Paecilomyces variotii
Paenibacillus
Paenibacillus agaridevorans
Paenibacillus alvei
Paenibacillus edaphicus
Paenibacillus validus
Paenibacillus larvae
Paenibacillus lentimorbus
Paenibacillus macerans
Paenibacillus pabuli
Paenibacillus polymyxa
Paenibacillus popilliae
Paenibacillus provencensis
Paenibacillus thiaminolyticus
Paenibacillus urinalis
Paenibacillus validus
Pandoraea
Pandoraea apista
Pandoraea norimbergensis
Pandoraea pnomenusa
Pandoraea pulmonicola
Pandoraea sputorum
Pantoea
Pantoea agglomerans
Pantoea ananatis
Pantoea ananatis
Pantoea dispersa
Parabacteroides
Parabacteroides distasonis
Parabacteroides goldsteinii
Parabacteroides merdae
Paraburkholderia
Paraburkholderia fungorum
Paracoccus
Paracoccus yeei
Parascardovia
Parascardovia denticolens
Parvimonas
Parvimonas micra
Genus Parvovirus
Pasteurella
Pasteurella aerogenes
Pasteurella bettyae
Pasteurella caballi
Pasteurella canis
Pasteurella dagmatis
Mannheimia haemolytica
Pasteurella multocida
Pasteurella multocida ss. gallicida
Pasteurella multocida ss. multocida
Pasteurella multocida ss. septica
Pasteurella pneumotropica
Pasteurella stomatis
Actinobacillus ureae
Patulibacter
Genus Pectobacterium
Pediculus humanus
Pediococcus
Pediococcus acidilactici
Pediococcus pentosaceus
Aerococcus urinaeequi
Pedobacter
Pedobacter heparinus
Pedobacter piscium
Penicillium
Penicillium citrinum
Penicillium commune
Penicillium decumbens
Penicillium expansum
Penicillium griseofulvum
Paecilomyces lilacinus
Penicillium marneffei
Penicillium griseofulvum
Penicillium puberulum
Talaromyces ruber
Penicillium spinulosum
Penicillium verruculosum
Penicillium viridicatum
Peptococcus
Peptoniphilus asaccharolyticus
Peptococcus niger
Staphylococcus saccharolyticus
Peptoniphilus
Peptoniphilus asaccharolyticus
Peptoniphilus harei
Peptoniphilus ivorii
Peptoniphilus lacrimalis
Peptostreptococcus
Peptostreptococcus anaerobius
Peptoniphilus asaccharolyticus
Megasphaera elsdenii
Anaerococcus hydrogenalis
Anaerococcus lactolyticus
Finegoldia magna
Parvimonas micra
Anaerococcus octavius
Atopobium parvulum
Anaerococcus prevotii
Blautia producta
Anaerococcus tretradius
Anaerococcus vaginalis
Pseudallescheria boydii
Pseudallescheria boydii
Phaeoacremonium
Phaeoacremonium parasiticum
Phaeoannellomyces
Exophiala werneckii
Exophiala werneckii
Phaeococcomyces
Phaeococcomyces exophialae
Phialemonium
Phialemonium curvatum
Phialemonium dimorphosporum
Phialemonium obovatum
Lecythophora mutabilis
Phialophora
Phialophora americana
Fonsecaea compacta
Fonsecaea compacta
Wangiella dermatitidis
Phialophora europaea
Exophiala jeanselmei
Lecythophora hoffmannii
Exophiala jeanselmei
Fonsecaea pedrosoi
Pleurostomophora richardsiae
Exophiala spinifera
Phialophora verrucosa
Phoma
Photobacterium
Photobacterium damselae subsp damselae
Photorhabdus
Photorhabdus asymbiotica
Photorhabdus luminescens
Photorhabdus temperata
Pichia
Pichia angusta
Pichia anomala
Cyberlindnera fabianii
Pichia farinosa
Meyerozyma guilliermondii
Pichia kudriavzevii
Kodamaea ohmeri
Schwanniomyces polymorphus
Family Picornaviridae
Piedraia
Piedraia hortae
Pithomyces
Malassezia
Malassezia pachydermatis
Malassezia furfur
Malassezia furfur
Malassezia furfur
Malassezia pachydermatis
Plasmodium
Plasmodium falciparum
Plasmodium knowlesi
Plasmodium malariae
Plasmodium ovale
Plasmodium vivax
Plesiomonas
Plesiomonas shigelloides
Pleurostomophora
Pleurostomophora richardsiae
Pluralibacter
Pluralibacter gergoviae
Pluralibacter pyrinus
Genus Polyomavirus
Porphyromonas
Porphyromonas asaccharolyticus
Porphyromonas cangingivalis
Porphyromonas canoris
Porphyromonas cansulci
Porphyromonas catoniae
Porphyromonas circumentaria
Porphyromonas crevioricanis
Porphyromonas endodontalis
Porphyromonas gingivalis
Porphyromonas gingivicanis
Porphyromonas gulae
Porphyromonas levii
Porphyromonas macacae
Porphyromonas macacae
Porphyromonas somerae
Poxviridae
Pragia
Pragia fontium
Prevotella
Prevotella bivia
Prevotella buccae
Prevotella buccalis
Prevotella corporis
Prevotella dentalis
Prevotella denticola
Prevotella disiens
Prevotella enoeca
Prevotella heparinolytica
Prevotella intermedia
Prevotella loescheii
Prevotella marshii
Prevotella melaninogenica
Prevotella multiformis
Prevotella multisaccharivorax
Prevotella nigrescens
Prevotella oralis
Prevotella oralis group
Prevotella oris
Prevotella oulorum
Prevotella oulorum
Prevotella pallens
Prevotella ruminicola
Prevotella salivae
Prevotella shahii
Prevotella tannerae
Prevotella veroralis
Bacteroides zoogleoformans
Propionibacterium
Propionibacterium acidipropionici
Cutibacterium acnes
Propionibacterium australiense
Propionibacterium avidum
Propionibacterium cyclohexanicum
Propionibacterium freudenreichii
Propionibacterium granulosum
Propioniferax innocus
Propionibacterium jensenii
Propionibacterium lymphophilum
Propionibacterium microaerophilum
Propionibacterium prionicus
Propionibacterium propionicum
Propionibacterium thoenii
Propionibacterium thoenii
Propioniferax
Propioniferax innocus
Propionimicrobium
Propionimicrobium lymphophilum
Proteus
Proteus hauseri
Providencia alcalifaciens
Proteus mirabilis
Proteus myxofaciens
Proteus penneri
Providencia rettgeri
Proteus vulgaris
Prototheca
Sarcinosporon inkin
Prototheca wickerhamii
Prototheca zopfii
Kingdom Protozoa
Providencia
Providencia alcalifaciens
Providencia rustigianii
Providencia heimbachae
Providencia rettgeri
Providencia rustigianii
Providencia stuartii
Pseudallescheria
Pseudallescheria boydii
Pseudallescheria
Pseudallescheria boydii
Pseudoclavibacter
Pseudoflavonifractor
Pseudoflavonifractor capillosus
Pseudomonas
Delftia acidovorans
Pseudomonas aeruginosa
Pseudomonas alcaligenes
Burkholderia gladioli
Burkholderia gladioli
Stenotrophomonas maltophilia
Stenotrophomonas maltophilia
Burkholderia cepacia
Pseudomonas stutzeri
Pseudomonas chlororaphis
Burkholderia gladioli
Acidovorax delafieldii
Brevundimonas diminuta
Acidovorax facilis
Pseudomonas fluorescens
Burkholderia gladioli
Chryseomonas luteola
Burkholderia mallei
Stenotrophomonas maltophilia
Pseudomonas marginalis
Pseudomonas mendocina
Pseudomonas monteilii
Pseudomonas mosselii
Burkholderia cepacia
Alcaligenes faecalis
Pseudomonas oryzihabitans
Sphingomonas paucimobilis
Pseudomonas stutzeri
Pseudomonas pertucinogena
Ralstonia pickettii
Pseudomonas pseudoalcaligenes
Burkholderia pseudomallei
Pseudomonas putida
Shewanella putrefaciens
Burkholderia pyrrocinia
Pseudomonas stutzeri
Comamonas testosteroni
Pseudomonas veronii
Brevundimonas vesicularis
Pseudoramibacter
Pseudoramibacter alactolyticus
Pseudoxanthomonas
Pseudoxanthomonas koreensis
Pseudozyma
Pseudozyma aphidids
Psychrobacillus
Psychrobacter
Psychrobacter immobilis
Psychrobacter phenylpyruvicus
Aureobasidium
Aureobasidium pullulans
Orf virus
Pyrenochaeta
Pyrenochaeta romeroi
Rabies virus
Rahnella
Rahnella aquatilis
Ralstonia
Cupriavidus gilardii
Ralstonia insidiosa
Ralstonia mannitolilytica
Ralstonia pickettii
Cupriavidus respiraculi
Rhinocladiella aquaspersa
Raoultella
Raoultella ornithinolytica
Raoultella planticola
Raoultella terrigena
Rapid growing mycobacteria
Orthoreovirus
Genus Respirovirus
Genus Rhabdovirus
Rhinocladiella
Rhinocladiella aquaspersa
Rhinocladiella atrovirens
Fonsecaea compacta
Fonsecaea compacta
Fonsecaea pedrosoi
Exophiala spinifera
Rhinosporidium
Rhizobium
Rhizobium radiobacter
Rhizobium rubi
Rhizobium vitis
Rhizomucor
Rhizomucor miehei
Rhizomucor pusillus
Rhizopus
Rhizopus arrhizus
Rhizopus microsporus
Rhizopus stolonifer
Rhizopus arrhizus
Rhizopus stolonifer
Rhodococcus
Tsukamurella paurometabola
Gordonia bronchialis
Mycobacterium chlorophenolicus chlorophenolicum
Gordonia sputi
Rhodococcus equi
Rhodococcus erythropolis
Rhodococcus fascians
Rhodococcus globerulus
Rhodococcus gordoniae
Rhodococcus fascians
Gordonia sputi
Rhodococcus rhodochrous
Rhodococcus rhodochrous
Gordonia rubripertincta
Gordonia terrae
Rhodotorula
Rhodotorula glutinis
Rhodotorula minuta
Rhodotorula rubra
Rhodotorula pilimanae
Rhodotorula rubra
Rickettsia
Rickettsia akari
Rickettsia conorii
Rickettsia parkeri
Rickettsia prowazekii
Bartonella quintana
Rickettsia rickettsii
Rickettsia sibirica
Orientia tsutsugamushi
Rickettsia typhi
Riemerella
Riemerella anatipestifer
Rift Valley fever virus
Robinsoniella
Robinsoniella peoriensis
Bartonella elizabethae
Bartonella henselae
Bartonella quintana
Bartonella vinsonii
Roseomonas
Roseomonas cervicalis
Roseomonas gilardii
Roseomonas mucosa
Rotavirus
Rothia
Rothia aeria
Rothia dentocariosa
Rothia mucilaginosa
Rubella virus
Measles virus
Rubivirus
Ruminococcus
Ruminococcus gnavus
Blautia hansenii
Blautia producta
Rummeliibacillus
Rummeliibacillus pycnus
Saccharomonospora
Saccharomonospora glauca
Saccharomonospora viridis
Saccharomyces
Saccharomyces cerevisiae
Saccharopolyspora
Saccharopolyspora rectivirgula
Saksenaea
Saksenaea vasiformis
Human cytomegalovirus 5
Salmonella
Salmonella bongori
Salmonella enterica
Saprochaete
Sarcina
Micrococcus luteus
Sarcina ventriculi
Sarcinosporon inkin
Exophiala werneckii
Sarcinosporon
Sarcinosporon inkin
Sarcocystis
Sarcocystis hominis
Sarcocystis lindemanni
Sarcocystis suihominis
Sarcoptes scabiei
SARS-CoV-2
Sarcoptes scabiei
Scardovia
Scardovia inopinata
Scedosporium
Scedosporium apiospermum
Scedosporium boydii
Scedosporium inflatum
Scedosporium inflatum
Schizophyllum
Schizophyllum commune
Schwanniomyces
Schwanniomyces polymorphus
Scolecobasidium
Ochroconis constricta
Scolecobasidium humicola
Scopulariopsis
Scopulariopsis acremonium
Scopulariopsis brevicaulis
Scopulariopsis brumptii
Scopulariopsis candida
Scytalidium
Neoscytalidium dimidiatum
Scytalidium hyalinum
Selenomonas
Selenomonas artemidis
Selenomonas dianae
Selenomonas flueggei
Selenomonas infelix
Selenomonas noxia
Selenomonas sputigena
Sepedonium
Serpulina
Brachyspira pilosicoli
Serratia
Serratia entomophila
Serratia ficaria
Serratia fonticola
Serratia grimesii
Serratia liquefaciens
Serratia marcescens
Serratia rubidaea
Serratia odorifera
Serratia plymuthica
Serratia proteamaculans
Serratia quinivorans
Serratia rubidaea
Serratia ureilytica
Shewanella
Shewanella algae
Shewanella putrefaciens
Shigella
Shigella boydii
Shigella dysenteriae
Shigella flexneri
Shigella sonnei
Simian virus 40
Simonsiella
Alysiella crassa
Simonsiella muelleri
Slackia
Slackia exigua
Slackia heliotrinireducens
Small-colony-forming beta-hemolytic group A streptococci
Small-colony-forming beta-hemolytic group C streptococci
Small-colony-forming beta-hemolytic group G streptococci
Variola virus
Sneathia
Sneathia sanguinegens
Solibacillus
Solibacillus silvestris
Solobacterium
Solobacterium moorei
Sphingobacterium
Sphingobacterium faecium
Pedobacter heparinus
Flavobacterium mitzutaii
Sphingobacterium multivorum
Pedobacter piscium
Sphingobacterium spiritivorum
Sphingobacterium thalpophilum
Sphingomonas
Sphingomonas parapaucimobilis
Sphingomonas paucimobilis
Spirillum
Sporobolomyces
Sporobolomyces roseus
Sporobolomyces salmonicolor
Sporolactobacillus
Sporolactobacillus laevolacticus
Sporopachydermia
Sporosarcina
Sporothrix
Sporothrix cyanescens
Sporothrix schenckii
Sporothrix schenckii
Sporotrichum
Sporothrix schenckii
Sporotrichum pruinosum
Sporothrix schenckii
Sporothrix schenckii
St. Louis encephalitis virus
Stachybotrys
Stachybotrys chartarum
Staphylococcus
Staphylococcus arlettae
Staphylococcus aureus
Staphylococcus auricularis
Staphylococcus capitis
Staphylococcus capitis ss capitis
Staphylococcus capitis subspecies urealyticus
Staphylococcus caprae
Staphylococcus carnosus
Staphylococcus carnosus carnosus
Staphylococcus carnosus utilis
Macrococcus caseolyticus
Staphylococcus chromogenes
Staphylococcus cohnii
Staphylococcus cohnii ss cohnii
Staphylococcus cohnii subspecies urealyticus
Staphylococcus condimenti
Staphylococcus delphini
Staphylococcus epidermidis
Staphylococcus equorum
Staphylococcus equorum equorum
Staphylococcus equorum linens
Staphylococcus felis
Staphylococcus fleurettii
Staphylococcus gallinarum
Staphylococcus haemolyticus
Staphylococcus hominis
Staphylococcus hominis hominis
Staphylococcus hominis novobiosepticus
Staphylococcus hyicus
Staphylococcus chromogenes
Staphylococcus hyicus
Staphylococcus intermedius
Staphylococcus kloosii
Staphylococcus lentus
Staphylococcus lugdunensis
Staphylococcus lutrae
Staphylococcus muscae
Staphylococcus nepalensis
Veillonella parvula
Staphylococcus pasteuri
Staphylococcus pettenkoferi
Staphylococcus piscifermentans
Staphylococcus pseudintermedius
Staphylococcus vitulinus
Staphylococcus saccharolyticus
Staphylococcus saprophyticus
Staphylococcus saprophyticus ss bovis
Staphylococcus saprophyticus ss saprophyticus
Staphylococcus schleiferi
Staphylococcus schleiferi subsp. coagulans
Staphylococcus schleiferi ss. schleiferi
Staphylococcus sciuri
Staphylococcus sciuri carnaticus
Staphylococcus lentus
Staphylococcus sciuri rodentium
Staphylococcus scuiri scuiri
Staphylococcus simulans
Staphylococcus succinus
Staphylococcus succinus casei
Staphylococcus succinus ss. succinus
Staphylococcus vitulinus
Staphylococcus warneri
Staphylococcus xylosus
Staphylococcus, coagulase negative
Staphylococcus, coagulase positive
Stemphylium
Stenotrophomonas
Stenotrophomonas maltophilia
Stephanoascus
Stephanoascus ciferrii
Rothia mucilaginosa
Streptobacillus
Streptobacillus moniliformis
Streptococcus
Streptococcus acidominimus
Granulicatella adiacens
Group B streptococcus
Streptococcus alactolyticus
Streptococcus anginosus group
Streptococcus anginosus
Streptococcus anginosus group
Streptococcus anginosus-constellatus
Streptococcus australis
Enterococcus avium
Streptococcus bovis group
Streptococcus canis
Streptococcus gallolyticus
Enterococcus casseliflavus
Enterococcus cecorum
Streptococcus constellatus
Streptococcus constellatus subspecies constellatus
Streptococcus constellatus subspecies pharyngis
Streptococcus criceti
Streptococcus cristatus
Abiotrophia defectiva
Streptococcus dentisani
Streptococcus dolonei
Enterococcus durans
Streptococcus dysgalactiae
Streptococcus dysgalactiae subsp. dysgalactiae
Streptococcus dysgalactiae subsp. equisimilis
Granulicatella elegans
Streptococcus entericus
Streptococcus equi
Streptococcus equi subsp. equi
Streptococcus equi subsp. zooepidemicus
Streptococcus equinus
Enterococcus faecalis
Enterococcus faecium
Streptococcus ferus
Enterococcus gallinarum
Streptococcus gallolyticus
Streptococcus gallolyticus subspecies gallolyticus
Streptococcus gallolyticus subspecies macedonicus
Streptococcus gallolyticus subspecies pasteurianus
Lactococcus garvieae
Streptococcus gordonii
Blautia hansenii
Streptococcus hyovaginalis
Streptococcus infantarius
Streptococcus lutetiensis
Streptococcus infantarius subspecies infantarius
Streptococcus infantis
Streptococcus iniae
Streptococcus intermedius
Streptococcus alactolyticus
Lactococcus lactis
Streptococcus lutetiensis
Streptococcus macacae
Streptococcus anginosus group
Streptococcus mitis
Streptococcus mitis group
Gemella morbillorum
Streptococcus mutans
Streptococcus mutans group
Streptococcus oligofermentans
Streptococcus oralis
Streptococcus ovis
Streptococcus parasanguinis
Streptococcus parauberis
Atopobium parvulum
Streptococcus gallolyticus subspecies pasteurianus
Streptococcus peroris
Streptococcus pluranimalium
Streptococcus pneumoniae
Streptococcus porcinus
Blautia producta
Streptococcus pseudopneumoniae
Streptococcus pseudoporcinus
Streptococcus pyogenes
Streptococcus ratti
Enterococcus saccharolyticus
Streptococcus salivarius
Streptococcus salivarius group
Streptococcus salivarius subsp. salivarius
Streptococcus salivarius subsp. thermophilus
Streptococcus sanguinis
Streptococcus sanguinis group
Streptococcus iniae
Streptococcus sinensis
Streptococcus sobrinus
Streptococcus suis
Streptococcus salivarius subsp. thermophilus
Streptococcus tigurinus
Streptococcus uberis
Streptococcus vestibularis
Streptococcus, group C
Streptococcus, group D
Streptococcus, group F
Streptococcus, group G
Streptomyces
Streptomyces albus
Streptomyces bikiniensis
Streptomyces candidus
Streptomyces griseus
Streptomyces clavuligerus
Streptomyces griseus
Streptomyces filamentosus
Streptomyces griseus
Streptomyces lincolnensis
Streptomyces filamentosus
Streptomyces griseus
Streptomyces somaliensis
Streptomyces spectabilis
Streptomyces thermovulgaris
Streptomyces venezuelae
Strongyloides
Succinivibrio
Succinivibrio dextrinosolvens
Sutterella
Sutterella wadsworthensis
Suttonella
Suttonella indologenes
Syncephalastrum
Syncephalastrum racemosum
Taenia
Talaromyces
Penicillium marneffei
Talaromyces ruber
Tanapox virus
Tannerella
Tannerella forsythia
Legionella maceachernii
Legionella micdadei
Tatumella
Tatumella ptyseos
Tetragenococcus
Tetragenococcus halophilus
Tetragenococcus solitarius
Thermoactinomyces
Tick-borne encephalitis virus
Tissierella
Tissierella praeacuta
Togaviridae
Neoscytalidium dimidiatum
Candida lipolytica
Candida utilis
Candida pararugosa
Candida haemulonii
Candida inconspicua
Candida pintolopesii
Candida utilis
Candida utilis
Toxocara
Toxoplasma
Toxoplasma gondii
Trabulsiella
Trabulsiella guamensis
Treponema
Treponema carateum
Treponema pallidum
Trichinella
Trichoderma
Trichoderma viride
Trichomonas
Trichophyton
Trichosporon
Trichosporon asahii
Trichosporon beigelii
Trichosporon beigelii
Trichosporon beigelii
Sarcinosporon inkin
Trichosporon loubieri
Trichosporon mucoides
Trichosporon mycotoxinivorans
Trichosporon ovoides
Geotrichum klebahnii
Trichosporon pullulans
Trichostrongylus
Trichothecium
Trichuris
Tropheryma
Tropheryma whipplei
Trueperella
Trueperella bernardiae
Trueperella pyogenes
Trypanosoma
Trypanosoma brucei
Trypanosoma brucei rhodesiense
Trypanosoma cruzi
Trypanosoma cruzi
Trypanosoma rangeli
Trypanosoma cruzi
Tsukamurella
Tsukamurella inchonensis
Tsukamurella paurometabola
Tsukamurella pulmonis
Tsukamurella strandjordii
Tsukamurella tyrosinosolvens
Turicella
Turicella otitidis
Turicibacter
Turicibacter sanguinis
Ulocladium
Ureaplasma
Ureaplasma parvum
Ureaplasma urealyticum
Ustilago
Vaccinia virus
Vagococcus
Vagococcus fluvialis
Vancomycin resistant Enterococcus
Vancomycin resistant Enterococcus faecalis
Vancomycin resistant Enterococcus faecium
Varicellovirus
Human herpesvirus 3
Varicellovirus
Variola virus
Veillonella
Veillonella parvula
Veillonella atypica
Veillonella caviae
Veillonella criceti
Veillonella dispar
Veillonella montpellierensis
Veillonella parvula
Veillonella ratti
Veillonella rodentium
Venezuelan equine encephalomyelitis virus
Verticillium
Vibrio
Vibrio alginolyticus
Vibrio harveyi
Vibrio cholerae
Vibrio cincinnatiensis
Photobacterium damselae subsp damselae
Campylobacter fetus
Vibrio fluvialis
Vibrio furnissii
Vibrio harveyi
Vibrio metschnikovii
Vibrio mimicus
Vibrio parahaemolyticus
Campylobacter sputorum
Wolinella succinogenes
Vibrio harveyi
Vibrio vulnificus
Virgibacillus
Virgibacillus pantothenticus
Streptococcus, viridans group
Virus
Wangiella
Wangiella dermatitidis
Wautersia
Cupriavidus gilardii
Cupriavidus pauculus
Cupriavidus respiraculi
Weeksella
Weeksella virosa
Bergeyella zoohelcum
Weissella
Weissella confusa
West Nile virus
Western equine encephalomyelitis virus
Wolinella
Campylobacter curvus
Campylobacter rectus
Wolinella succinogenes
Xanthomonas
Stenotrophomonas maltophilia
Xenorhabdus
Photorhabdus luminescens
Xenorhabdus nematophila
Xenotropic murine leukemia virus-related virus
Yeast
Yellow fever virus
Yersinia
Yersinia aldovae
Yersinia aleksiciae
Yersinia bercovieri
Yersinia enterocolitica
Yersinia frederiksenii
Yersinia intermedia
Yersinia kristensenii
Yersinia mollaretii
Yersinia pestis
Yersinia pseudotuberculosis
Yersinia rohdei
Yersinia ruckeri
Yokenella
Yokenella regensburgei
Zika virus
Clostridium oroticum
 bsence of an organism to mean the event
nce on appropriate reporting.

SNOMED Code
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113713009
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25223004
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89922004
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447428000
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114223009
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103510000
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36623007
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19464000
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31335001
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34726005
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48621001
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413724008
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444877006
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445721008
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7333005
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363774008
363775009
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It is possible that your laboratory may identify an organism that cannot be found when referencing the NHSN Organ
not reportable. If you have an organism which is not found on the NHSN Organism List, please conta

NHSN Code NHSN Display Name

ACTME*1 Actinobacterium meyeri
ACTSP Actinomyces
TRUEBERN*1 Actinomyces bernardiae
ACTBO Actinomyces bovis
ACTCARD Actinomyces cardiffensis
ACTDENT Actinomyces dentalis
ACTEURO Actinomyces europaeus
ACTFUNK Actinomyces funkei
ACTGE Actinomyces georgiae
ACTGR Actinomyces gerencseriae
ACTGRAE Actinomyces graevenitzii
ACTHONG Actinomyces hongkongensis
ACTIS Actinomyces israelii
ACTME Actinomyces meyeri
ACTNA Actinomyces naeslundii
ACTNASI Actinomyces nasicola
ACTNEUI Actinomyces neuii
ACTOD Actinomyces odontolyticus
ACTORIC Actinomyces oricola
ACTORIS Actinomyces oris
ARCPY*1 Actinomyces pyogenes
ACTRADI Actinomyces radicidentis
ACTRADIN Actinomyces radingae
ACTTURI Actinomyces turicensis
ACTUROG Actinomyces urogenitalis
ACTVI Actinomyces viscosus
AEGU Aerococcus
AECH Aerococcus christensenii
AESGN Aerococcus sanguinicola
AEUR Aerococcus urinae
AEURQ Aerococcus urinaeequi
AEURH Aerococcus urinaehominis
AEVI Aerococcus viridans
ASNSP Alpha-hemolytic Streptococcus, not S pneumoniae
PRPRO*2 Arachnia propionica
ARCSP Arcanobacterium
TRUEBERN*2 Arcanobacterium bernardiae
ARCHA Arcanobacterium haemolyticum
ARCPLUR Arcanobacterium pluranimalium
ARCPY*3 Arcanobacterium pyogenes
ARTSP Arthrobacter
ARTAGIL Arthrobacter agilis
ARTALBU Arthrobacter albus
ARTARIL Arthrobacter arilaitensis
ARTASTR Arthrobacter astrocyaneus
ARTAURE Arthrobacter aurescens
ARTBERG Arthrobacter bergerei
ARTCHLO Arthrobacter chlorophenolicus
ARTCITR Arthrobacter citreus
ARTCREA Arthrobacter creatinolyticus
ARTCRYS Arthrobacter crystallopoietes
ARTCUMM Arthrobacter cumminsii
ARTFLAV Arthrobacter flavus
ARTGAND Arthrobacter gandavensis
ARTGANG Arthrobacter gangotriensis
ARTGLOB Arthrobacter globiformis
ARTHIST Arthrobacter histidinolovorans
ARTILIC Arthrobacter ilicis
ARTKERG Arthrobacter kerguelensis
ARTKORE Arthrobacter koreensis
ARTLUTE Arthrobacter luteolus
ARTMETH Arthrobacter methylotrophus
ARTMYSO Arthrobacter mysorens
ARTNASI Arthrobacter nasiphocae
ARTNICO Arthrobacter nicotianae
ARTNICOT Arthrobacter nicotinovorans
ARTNITR Arthrobacter nitroguajacolicus
ARTORYZ Arthrobacter oryzae
ARTOXYD Arthrobacter oxydans
ARTPASC Arthrobacter pascens
ARTPOLY Arthrobacter polychromogenes
ARTPROT Arthrobacter protophormiae
ARTPSYC Arthrobacter psychrolactophilus
ARTPSYCH Arthrobacter psychrophenolicus
ARTRAMO Arthrobacter ramosus
ARTRHOM Arthrobacter rhombi
ARTROSE Arthrobacter roseus
ARTRUSS Arthrobacter russicus
ARTSCLE Arthrobacter scleromae
ARTSULF Arthrobacter sulfonivorans
ARTSULFU Arthrobacter sulfureus
ARTURAT Arthrobacter uratoxydans
ARTUREA Arthrobacter ureafaciens
CORVAR*2 Arthrobacter variabilis
ARTVISC Arthrobacter viscosus
ARTWOLU Arthrobacter woluwensis
MICRLIQU*1 Aureobacterium liquefaciens
BAC Bacillus
BAEOL Bacillus aeolius
BAERI Bacillus aerius
BAGAR Bacillus agaradhaerens
BREVIAGRI*1 Bacillus agri
BALCA Bacillus alcalophilus
BALGI Bacillus algicola
PAEALV*1 Bacillus alvei
BAMYL Bacillus amyloliquefaciens
BAQUI Bacillus aquimaris
BARSE Bacillus arseniciselenatis
BASAH Bacillus asahii
BATRO Bacillus atrophaeus
BAZOT Bacillus azotoformans
BBADI Bacillus badius
BBARB Bacillus barbaricus
BBATA Bacillus bataviensis
BBENZ Bacillus benzoevorans
BBORO Bacillus boroniphilus
BREBRE*1 Bacillus brevis
BBUTA Bacillus butanolivorans
BCARB Bacillus carboniphilus
BREVICENT*1 Bacillus centrosporus
BC Bacillus cereus
BCERG Bacillus cereus group
BCHIT Bacillus chittonlyticus
BACCIR Bacillus circulans
BACCIRG Bacillus circulans group
BCLARK Bacillus clarkii
BCLAUS Bacillus clausii
BACCOA Bacillus coagulans
BCOHN Bacillus cohnii
BDECI Bacillus decisifrondis
BDECO Bacillus decolorationis
BDIPS Bacillus dipsosauri
BDREN Bacillus drentensis
BEDAP*1 Bacillus edaphicus
BEHIM Bacillus ehimensis
BENDO Bacillus endophyticus
BFARR Bacillus farraginis
BFAST Bacillus fastidiosus
BACFIR Bacillus firmus
BFLEX Bacillus flexus
BFORD Bacillus fordii
BFORT Bacillus fortis
BFUMA Bacillus fumarioli
BFUNI Bacillus funiculus
BREVIAGRI*2 Bacillus galactophilus
BGALA Bacillus galactosidilyticus
BGELA Bacillus gelatini
BGIBS Bacillus gibsonii
BGINS Bacillus ginsengi
BGORN Bacillus gornadae
BHALM Bacillus halmapalus
BHALDF Bacillus halodenitrificans
BHALDR Bacillus halodurans
BHORI Bacillus horikoshii
BHORT Bacillus horti
BHUMI Bacillus humi
BHWAJ Bacillus hwajinpoensis
BIDRI Bacillus idriensis
BINDI Bacillus indicus
BINFA Bacillus infantis
BINFE Bacillus infernus
BJEOT Bacillus jeotgali
BKAUS Bacillus kaustophilus
BKORL Bacillus korlensis
BKRUL Bacillus krulwichiae
PAELARV*1 Bacillus larvae
BRELAT*1 Bacillus laterosporus
PAELENT*1 Bacillus lentimorbus
BACLEN Bacillus lentus
BACLIC Bacillus licheniformis
BLUCI Bacillus luciferensis
PAEMAC*2 Bacillus macerans
BMACR Bacillus macroides
BMACY Bacillus macyae
BMARN Bacillus marinus
BMARS Bacillus marisflavi
BMASS Bacillus massiliensis
BACMEG Bacillus megaterium
BMETH Bacillus methanolicus
BMOJA Bacillus mojavensis
BMUCI Bacillus mucilaginosus
BMURA Bacillus muralis
BMYCO Bacillus mycoides
BNAGA Bacillus naganoensis
BNEAL Bacillus nealsonii
BNIAC Bacillus niacini
BNOVA Bacillus novalis
BODYS Bacillus odysseyi
BOKUH Bacillus okuhidensis
BOLER Bacillus oleronius
PAEPABU*1 Bacillus pabuli
BPALL Bacillus pallidus
VIRPAN*1 Bacillus pantothenticus
BREVIPARA*1 Bacillus parabrevis
BPAST Bacillus pasteurii
BPATA Bacillus patagoniensis
BPOCH Bacillus pocheonensis
PAEPOL*2 Bacillus polymyxa
PAEPOPI*1 Bacillus popilliae
BPSDL Bacillus pseudalcaliphilus
BPSDF Bacillus pseudofirmus
BPSMY Bacillus pseudomycoides
BPSYP Bacillus psychrophilus
BPSYS Bacillus psychrosaccharolyticus
BPULV Bacillus pulvifaciens
BACPUM Bacillus pumilus
RUMMPYCN*1 Bacillus pycnus
BSALE Bacillus salexigens
BSALI Bacillus saliphilus
BSELE Bacillus selenitireducens
BSHAC Bacillus shackletonii
BSILV*1 Bacillus silvestris
BSIMP Bacillus simplex
BSIRA Bacillus siralis
BACSM Bacillus smithii
BSOLI Bacillus soli
BSONO Bacillus sonorensis
BSPOR Bacillus sporothermodurans
BSUBT Bacillus subterraneus
BSU Bacillus subtilis
BACSUG Bacillus subtilis group
BSIN Bacillus subtilis inaquosorum
BSSP Bacillus subtilis spizizenii
BSS Bacillus subtilis subtilis
BTEQU Bacillus tequilensis
BTHMN Bacillus thermantarcticus
BTHMM Bacillus thermoamylovorans
BTHMC Bacillus thermocatenulatus
BTHMCL Bacillus thermocloacae
BTHMG Bacillus thermoglucosidasius
PAETHIA*1 Bacillus thiaminolyticus
BACTHU Bacillus thuringiensis
BTUSC Bacillus tusciae
PAEVALI*2 Bacillus validus
BVALL Bacillus vallismortis
BVEDD Bacillus vedderi
BVELE Bacillus velezensis
BVIET Bacillus vietnamensis
BVIRE Bacillus vireti
BWEIH Bacillus weihenstephanensis
BACNANT Bacillus, not B. anthracis
CORMA*1 Bacterionema matruchotii
BREVISP Brevibacillus
BREVIAGRI Brevibacillus agri
BREBRE Brevibacillus brevis
BREVICENT Brevibacillus centrosporus
BRELAT Brevibacillus laterosporus
BREVIPARA Brevibacillus parabrevis
BRVSP Brevibacterium
CORAMM*1 Brevibacterium ammoniagenes
BRVCAS Brevibacterium casei
BRVEPI Brevibacterium epidermidis
MICRIMPE*2 Brevibacterium imperiale
BRVLINE Brevibacterium linens
BRVLUTE Brevibacterium luteolum
BRVMCBR Brevibacterium mcbrellneri
MICROXYD*1 Brevibacterium oxydans
BRVBRAVE Brevibacterium ravenspurgense
BRVSANG Brevibacterium sanguinis
CORVIT*1 Brevibacterium vitarumen
CELLSP Cellulomonas
CELLUCELL*1 Cellulomonas cellulans
CELLHOMI Cellulomonas hominis
CELLHUMI Cellulomonas humilata
CELLUSP Cellulosimicrobium
CELLUCELL Cellulosimicrobium cellulans
CORGN Corynebacterium
CORACC Corynebacterium accolens
CORA Corynebacterium afermentans
CORAA Corynebacterium afermentans afermentans
CORAL Corynebacterium afermentans lipophilum
CORAMM Corynebacterium ammoniagenes
CORAMY Corynebacterium amycolatum
CORAPP Corynebacterium appendicis
CORAQL Corynebacterium aquilae
CORARG Corynebacterium argentoratense
CORATY Corynebacterium atypicum
CORAR Corynebacterium aurimucosum
CORARS Corynebacterium auris
CORARSC Corynebacterium auriscanis
CORBET Corynebacterium beticola
CORBO Corynebacterium bovis
CORCAL Corynebacterium callunae
CORCAM Corynebacterium camporealensis
CORCAP Corynebacterium capitovis
CORCAS Corynebacterium casei
CORCSP Corynebacterium caspium
CORCIC Corynebacterium ciconiae
CORCON Corynebacterium confusum
CORCOY Corynebacterium coyleae
CORCY Corynebacterium cystitidis
CORDUR Corynebacterium durum
COREFF Corynebacterium efficiens
RHOEQ*2 Corynebacterium equi
CORFAL Corynebacterium falsenii
RHOFASC*2 Corynebacterium fascians
CORFEL Corynebacterium felinum
CORFVS Corynebacterium flavescens
CORST*1 Corynebacterium flavidum
CORFRE Corynebacterium freneyi
CORGEN Corynebacterium genitalium
CORGLA Corynebacterium glaucum
CORGLU Corynebacterium glucuronolyticum
CORGL Corynebacterium glutamicum
CORHAL Corynebacterium halotolerans
ARCHA*1 Corynebacterium hemolyticum
CORHOA Corynebacterium hoagii
CORPD*1 Corynebacterium hofmannii
CORIMI Corynebacterium imitans
CORJK Corynebacterium jeikeium
CORKRO Corynebacterium kroppenstedtii
CORKU Corynebacterium kutscheri
CORGL*1 Corynebacterium lilium
CORLIP Corynebacterium lipophiloflavum
CORMAC Corynebacterium macginleyi
CORMAN Corynebacterium manihot
CORMSL Corynebacterium massiliense
CORMST Corynebacterium mastitidis
CORMA Corynebacterium matruchotii
CORMED Corynebacterium mediolanum
CORMI Corynebacterium minutissimum
CORVAR*1 Corynebacterium mooreparkense
CORMUC Corynebacterium mucifaciens
CORMRS Corynebacterium murisepticum
CORKU*1 Corynebacterium murium
CORMY Corynebacterium mycetoides
CORNEP Corynebacterium nephridii
CORAR*1 Corynebacterium nigricans
CORPS*1 Corynebacterium ovis
TSUKPAUR*2 Corynebacterium paurometabolum
CORPHO Corynebacterium phocae
CORPI Corynebacterium pilosum
CORPRO Corynebacterium propinquum
CORPD Corynebacterium pseudodiphtheriticum
CORPST Corynebacterium pseudogenitalium
CORPS Corynebacterium pseudotuberculosis
CORPSM Corynebacterium pseudotuberculostearicum
ARCPY*2 Corynebacterium pyogenes
CORPYRU Corynebacterium pyruviciproducens
CORRE Corynebacterium renale
CORRES Corynebacterium resistens
CORRIE Corynebacterium riegelii
CORRUB Corynebacterium rubrum
CORGLU*1 Corynebacterium seminale
CORSIM Corynebacterium simulans
CORSIN Corynebacterium singulare
CORSPI Corynebacterium sphenisci
CORSPM Corynebacterium spheniscorum
CORST Corynebacterium striatum
CORSUI Corynebacterium suicordis
CORSUN Corynebacterium sundsvallense
CORTEN Corynebacterium tenuis
CORTER Corynebacterium terpenotabidum
CORTES Corynebacterium testudinoris
CORTHO Corynebacterium thomssenii
CORTUB Corynebacterium tuberculostearicum
CORTUSC Corynebacterium tuscaniense
CORUL Corynebacterium ulcerans
CORUR Corynebacterium urealyticum
CORURE Corynebacterium ureicelerivorans
CORVAR Corynebacterium variabile
CORVAR*3 Corynebacterium variabilis
CORVIS Corynebacterium viscosum
CORVIT Corynebacterium vitaeruminis
CORVIT*2 Corynebacterium vitarumen
CORVIT*3 Corynebacterium vitaruminis
CORXE Corynebacterium xerosis
CORNCD Corynebacterium, not C. diphtheriae
CORNCJ Corynebacterium, not C. jeikeium
CORTOX Corynebacterium, toxigenic
CORGPB coryneform gram positive bacilli
CUTISP Cutibacterium
PRPAC Cutibacterium acnes
DERMASP Dermabacter
DERMAHOM Dermabacter hominis
DERMSP Dermacoccus
DENISH Dermacoccus nishinomiyaensis
DIPTH Diphtheroids
DIPTHAE Diphtheroids, aerobic
DIPTHAN Diphtheroids, anaerobic
EXIGSP Exiguobacterium
EXIGACET Exiguobacterium acetylicum
MICRARBO*1 Flavobacterium arborescens
MICRMARI*1 Flavobacterium marinotypicum
MICRMARI*2 Flavobacterium maritypicum
GORDSP Gordonia
GORDBRON Gordonia bronchialis
GORDOTIT Gordonia otitidis
GORDPOLY Gordonia polyisoprenivorans
GORDRUBR Gordonia rubripertincta
GORDRUBR*1 Gordonia rubropertinctus
GORDSPUT Gordonia sputi
GORDTERR Gordonia terrae
JANISP Janibacter
JANIHOYL Janibacter hoylei
KOCSP Kocuria
KOCROS*2 Kocuria erythromyxa
KOCKRI Kocuria kristinae
KOCROS Kocuria rosea
KOCVAR Kocuria varians
KYTSP Kytococcus
KYSED Kytococcus sedentarius
LEIFSP Leifsonia
LEIFAQUA Leifsonia aquatica
LEIFXYLI Leifsonia xyli
MICRSP Microbacterium
MICRARBO Microbacterium arborescens
MICRHYDR Microbacterium hydrocarbonoxydans
MICRIMPE Microbacterium imperiale
MICRLACT Microbacterium lacticum
MICRLIQU Microbacterium liquefaciens
MICRMARI Microbacterium maritypicum
MICROXYD Microbacterium oxydans
MICRPARA Microbacterium paraoxydans
MICRRESI Microbacterium resistens
MICG Micrococcus
MICANT Micrococcus antarcticus
MICLUT*3 Micrococcus flavus
KOCKRI*1 Micrococcus kristinae
MICLUT Micrococcus luteus
MICLYL Micrococcus lylae
MICLUT*1 Micrococcus lysodeikticus
MICNIS Micrococcus nishinomiyaensis
KOCROS*1 Micrococcus roseus
KYSED*1 Micrococcus sedentarius
OERSP Oerskovia
PAESP Paenibacillus
PAEAGAR Paenibacillus agaridevorans
PAEALV Paenibacillus alvei
BEDAP Paenibacillus edaphicus
PAEVALI*1 Paenibacillus gordonae
PAELARV Paenibacillus larvae
PAELENT Paenibacillus lentimorbus
PAEMAC Paenibacillus macerans
PAEPABU Paenibacillus pabuli
PAEPOL Paenibacillus polymyxa
PAEPOPI Paenibacillus popilliae
PAEPROV Paenibacillus provencensis
PAETHIA Paenibacillus thiaminolyticus
PAEURIN Paenibacillus urinalis
PAEVALI Paenibacillus validus
AEURQ*1 Pediococcus urinaeequi
STASL*1 Peptococcus saccharolyticus
PRPG Propionibacterium
PRPA Propionibacterium acidipropionici
PRPAC*6 Propionibacterium acnes
PRPAU Propionibacterium australiense
PROAV Propionibacterium avidum
PRPCY Propionibacterium cyclohexanicum
PRPF Propionibacterium freudenreichii
PROGR Propionibacterium granulosum
PFI*1 Propionibacterium innocuum
PRPJE Propionibacterium jensenii
PRPLY Propionibacterium lymphophilum
PRPMI Propionibacterium microaerophilum
PRPPR Propionibacterium prionicus
PRPRO Propionibacterium propionicum
PRPTH*1 Propionibacterium rubrum
PRPTH Propionibacterium thoenii
PROPISP Propioniferax
PFI Propioniferax innocus
RHOSP Rhodococcus
TSUKPAUR*1 Rhodococcus aurantiacus
GORDBRON*1 Rhodococcus bronchialis
GORDSPUT*2 Rhodococcus chubuensis
RHOEQ Rhodococcus equi
RHOERYT Rhodococcus erythropolis
RHOFASC Rhodococcus fascians
RHOGLOB Rhodococcus globerulus
RHOGORD Rhodococcus gordoniae
RHOFASC*1 Rhodococcus luteus
GORDSPUT*1 Rhodococcus obuensis
RHORHOD Rhodococcus rhodochrous
RHORHOD*1 Rhodococcus roseus
GORDRUBR*2 Rhodococcus rubropertinctus
GORDTERR*1 Rhodococcus terrae
ROSE Roseomonas
ROSECERV Roseomonas cervicalis
ROSEGILA Roseomonas gilardii
ROSEMUCO Roseomonas mucosa
ROTSP Rothia
ROTAERI Rothia aeria
ROTDE Rothia dentocariosa
ROTHMU Rothia mucilaginosa
RUMMSP Rummeliibacillus
RUMMPYCN Rummeliibacillus pycnus
MICLUT*2 Sarcina luteus
STRBA Small-colony-forming beta-hemolytic group A streptococci
STRBC Small-colony-forming beta-hemolytic group C streptococci
STRBG Small-colony-forming beta-hemolytic group G streptococci
SOLISP Solibacillus
BSILV Solibacillus silvestris
STAARL Staphylococcus arlettae
STAAR Staphylococcus auricularis
STACS Staphylococcus capitis
STACC Staphylococcus capitis capitis
STACU Staphylococcus capitis urealyticus
STACAP Staphylococcus caprae
STACAR Staphylococcus carnosus
STACRC Staphylococcus carnosus carnosus
STACUT Staphylococcus carnosus utilis
STACHR Staphylococcus chromogenes
STACO Staphylococcus cohnii
STASCO Staphylococcus cohnii cohnii
STASUR Staphylococcus cohnii urealyticus
STACON Staphylococcus condimenti
SE Staphylococcus epidermidis
STAEQ Staphylococcus equorum
STAEE Staphylococcus equorum equorum
STAEL Staphylococcus equorum linens
STAFE Staphylococcus felis
STAFL Staphylococcus fleurettii
STAGA Staphylococcus gallinarum
STAHA Staphylococcus haemolyticus
STAHO Staphylococcus hominis
STAHOM Staphylococcus hominis hominis
STANOV Staphylococcus hominis novobiosepticus
STACHR*1 Staphylococcus hyicus chromogenes
STAKLO Staphylococcus kloosii
STALE Staphylococcus lentus
STALU Staphylococcus lugdunensis
STAMUS Staphylococcus muscae
STANEP Staphylococcus nepalensis
STAPAS Staphylococcus pasteuri
STAPETT Staphylococcus pettenkoferi
STAPIS Staphylococcus piscifermentans
STAVIT*1 Staphylococcus pulvereri
STASL Staphylococcus saccharolyticus
STASA Staphylococcus saprophyticus
STASB Staphylococcus saprophyticus bovis
STASAP Staphylococcus saprophyticus saprophyticus
STASCH Staphylococcus schleiferi schleiferi
STASC Staphylococcus sciuri
STASCN Staphylococcus sciuri carnaticus
STALE*1 Staphylococcus sciuri lentus
STASRO Staphylococcus sciuri rodentium
STASCU Staphylococcus scuiri scuiri
STASI Staphylococcus simulans
STASU Staphylococcus succinus
STASUC Staphylococcus succinus casei
STASUS Staphylococcus succinus succinus
STAVIT Staphylococcus vitulinus
STAWA Staphylococcus warneri
STAXY Staphylococcus xylosus
CNS Staphylococcus, coagulase negative
ROTHMU*1 Stomatococcus mucilaginosus
STRALAC Streptococcus alactolyticus
STRANG*1 Streptococcus anginosis milleri group
STRVN Streptococcus anginosus
STRANG Streptococcus anginosus group
STRAC Streptococcus anginosus-constellatus
STRAUS Streptococcus australis
STRBOVI Streptococcus bovis group
STRGALL*1 Streptococcus caprinus
STRVC Streptococcus constellatus
STRCC Streptococcus constellatus constellatus
STRCP Streptococcus constellatus pharyngis
STRCRC Streptococcus criceti
STRCR Streptococcus cristatus
STRDENT Streptococcus dentisani
STRD Streptococcus downei
STRDE Streptococcus equinus
STRF Streptococcus ferus
STRGALL Streptococcus gallolyticus
STRGALGAL Streptococcus gallolyticus gallolyticus
STRGALMAC Streptococcus gallolyticus macedonicus
STRGALPAS Streptococcus gallolyticus pasteurianus
STRVG Streptococcus gordonii
STRHYOV Streptococcus hyovaginalis
STRINFA Streptococcus infantarius
STRLUTE*1 Streptococcus infantarius coli
STRINFINF Streptococcus infantarius infantarius
STRINF Streptococcus infantis
SVI Streptococcus intermedius
STRALAC*1 Streptococcus intestinalis
STRLUTE Streptococcus lutetiensis
STRMACA Streptococcus macacae
STRANG*2 Streptococcus milleri group
STRVM Streptococcus mitis
STRMIT Streptococcus mitis group
STRVT Streptococcus mutans
STRMUG Streptococcus mutans group
STROLIG Streptococcus oligofermentans
STROR Streptococcus oralis
STRPA Streptococcus parasanguinis
STRGALPAS*1 Streptococcus pasteurianus
STRPER Streptococcus peroris
STRPSEU Streptococcus pseudopneumoniae
STRRT Streptococcus ratti
STRVS Streptococcus salivarius
STRSAG Streptococcus salivarius group
STRSLV Streptococcus salivarius salivarius
STRSAL Streptococcus salivarius thermophilus
SVS Streptococcus sanguinis
STRSG Streptococcus sanguinis group
STRSINE Streptococcus sinensis
STRSO Streptococcus sobrinus
STRSAL*1 Streptococcus thermophilus
STRTIGU Streptococcus tigurinus
STRVE Streptococcus vestibularis
GFS Streptococcus, group F
TRUESP Trueperella
TRUEBERN Trueperella bernardiae
ARCPY Trueperella pyogenes
TSUKSP Tsukamurella
TSUKINCH Tsukamurella inchonensis
TSUKPAUR Tsukamurella paurometabola
TSUKPULM Tsukamurella pulmonis
TSUKSTRA Tsukamurella strandjordii
TSUKTYRO Tsukamurella tyrosinosolvens
TURISP Turicella
TURIOTIT Turicella otitidis
VIRSP Virgibacillus
VIRPAN Virgibacillus pantothenticus
SVU Viridans group streptococci
not be found when referencing the NHSN Organism List. DO NOT interpret the absence of an organism to mean the event is
found on the NHSN Organism List, please contact us at nhsn@cdc.gov for guidance on appropriate reporting.

SNOMED Preferred Term

Actinomyces meyeri
Actinomyces
Trueperella bernardiae
Actinomyces bovis
Actinomyces cardiffensis
Actinomyces dentalis
Actinomyces europaeus
Actinomyces funkei
Actinomyces georgiae
Actinomyces gerencseriae
Actinomyces graevenitzii
Actinomyces hongkongensis
Actinomyces israelii
Actinomyces meyeri
Actinomyces naeslundii
Actinomyces nasicola
Actinomyces neuii
Actinomyces odontolyticus
Actinomyces oricola
Actinomyces oris
Trueperella pyogenes
Actinomyces radicidentis
Actinomyces radingae
Actinomyces turicensis
Actinomyces urogenitalis
Actinomyces viscosus
Aerococcus
Aerococcus christensenii
Aerococcus sanguinicola
Aerococcus urinae
Aerococcus urinaeequi
Aerococcus urinaehominis
Aerococcus viridans
Alpha-hemolytic Streptococcus species not Streptococcus pneumoniae
Propionibacterium propionicum
Arcanobacterium
Trueperella bernardiae
Arcanobacterium haemolyticum
Arcanobacterium pluranimalium
Trueperella pyogenes
Arthrobacter
Arthrobacter agilis
Arthrobacter albus
Arthrobacter arilaitensis
Arthrobacter astrocyaneus
Arthrobacter aurescens
Arthrobacter bergerei
Arthrobacter chlorophenolicus
Arthrobacter citreus
Arthrobacter creatinolyticus
Arthrobacter crystallopoietes
Arthrobacter cumminsii
Arthrobacter flavus
Arthrobacter gandavensis
Arthrobacter gangotriensis
Arthrobacter globiformis
Arthrobacter histidinolovorans
Arthrobacter ilicis
Arthrobacter kerguelensis
Arthrobacter koreensis
Arthrobacter luteolus
Arthrobacter methylotrophus
Arthrobacter mysorens
Arthrobacter nasiphocae
Arthrobacter nicotianae
Arthrobacter nicotinovorans
Arthrobacter nitroguajacolicus
Arthrobacter oryzae
Arthrobacter oxydans
Arthrobacter pascens
Arthrobacter polychromogenes
Arthrobacter protophormiae
Arthrobacter psychrolactophilus
Arthrobacter psychrophenolicus
Arthrobacter ramosus
Arthrobacter rhombi
Arthrobacter roseus
Arthrobacter russicus
Arthrobacter scleromae
Arthrobacter sulfonivorans
Arthrobacter sulfureus
Arthrobacter uratoxydans
Arthrobacter ureafaciens
Corynebacterium variabile
Arthrobacter viscosus
Arthrobacter woluwensis
Microbacterium liquefaciens
Bacillus
Bacillus aeolius
Bacillus aerius
Bacillus agaradhaerens
Brevibacillus agri
Bacillus alcalophilus
Bacillus algicola
Paenibacillus alvei
Bacillus amyloliquefaciens
Bacillus aquimaris
Bacillus arseniciselenatis
Bacillus asahii
Bacillus atrophaeus
Bacillus azotoformans
Bacillus badius
Bacillus barbaricus
Bacillus bataviensis
Bacillus benzoevorans
Bacillus boroniphilus
Brevibacillus brevis
Bacillus butanolivorans
Bacillus carboniphilus
Brevibacillus centrosporus
Bacillus cereus
Bacillus cereus group
Bacillus chittonlyticus
Bacillus circulans
Bacillus circulans group
Bacillus clarkii
Bacillus clausii
Bacillus coagulans
Bacillus cohnii
Bacillus decisifrondis
Bacillus decolorationis
Bacillus dipsosauri
Bacillus drentensis
Paenibacillus edaphicus
Bacillus ehimensis
Bacillus endophyticus
Bacillus farraginis
Bacillus fastidiosus
Bacillus firmus
Bacillus flexus
Bacillus fordii
Bacillus fortis
Bacillus fumarioli
Bacillus funiculus
Brevibacillus agri
Bacillus galactosidilyticus
Bacillus gelatini
Bacillus gibsonii
Bacillus ginsengi
Bacillus gornadae
Bacillus halmapalus
Bacillus halodenitrificans
Bacillus halodurans
Bacillus horikoshii
Bacillus horti
Bacillus humi
Bacillus hwajinpoensis
Bacillus idriensis
Bacillus indicus
Bacillus infantis
Bacillus infernus
Bacillus jeotgali
Bacillus kaustophilus
Bacillus korlensis
Bacillus krulwichiae
Paenibacillus larvae
Brevibacillus laterosporus
Paenibacillus lentimorbus
Bacillus lentus
Bacillus licheniformis
Bacillus luciferensis
Paenibacillus macerans
Bacillus macroides
Bacillus macyae
Bacillus marinus
Bacillus marisflavi
Bacillus massiliensis
Bacillus megaterium
Bacillus methanolicus
Bacillus mojavensis
Bacillus mucilaginosus
Bacillus muralis
Bacillus mycoides
Bacillus naganoensis
Bacillus nealsonii
Bacillus niacini
Bacillus novalis
Bacillus odysseyi
Bacillus okuhidensis
Bacillus oleronius
Paenibacillus pabuli
Bacillus pallidus
Virgibacillus pantothenticus
Brevibacillus parabrevis
Bacillus pasteurii
Bacillus patagoniensis
Bacillus pocheonensis
Paenibacillus polymyxa
Paenibacillus popilliae
Bacillus pseudalcaliphilus
Bacillus pseudofirmus
Bacillus pseudomycoides
Bacillus psychrophilus
Bacillus psychrosaccharolyticus
Bacillus pulvifaciens
Bacillus pumilus
Rummeliibacillus pycnus
Bacillus salexigens
Bacillus saliphilus
Bacillus selenitireducens
Bacillus shackletonii
Solibacillus silvestris
Bacillus simplex
Bacillus siralis
Bacillus smithii
Bacillus soli
Bacillus sonorensis
Bacillus sporothermodurans
Bacillus subterraneus
Bacillus subtilis
Bacillus subtilis group
Bacillus subtilis subspecies inaquosorum
Bacillus subtilis spizizenii
Bacillus subtilis subtilis
Bacillus tequilensis
Bacillus thermantarcticus
Bacillus thermoamylovorans
Bacillus thermocatenulatus
Bacillus thermocloacae
Bacillus thermoglucosidasius
Paenibacillus thiaminolyticus
Bacillus thuringiensis
Bacillus tusciae
Paenibacillus validus
Bacillus vallismortis
Bacillus vedderi
Bacillus velezensis
Bacillus vietnamensis
Bacillus vireti
Bacillus weihenstephanensis
Bacillus species not Bacillus anthracis
Corynebacterium matruchotii
Brevibacillus
Brevibacillus agri
Brevibacillus brevis
Brevibacillus centrosporus
Brevibacillus laterosporus
Brevibacillus parabrevis
Brevibacterium
Corynebacterium ammoniagenes
Brevibacterium casei
Brevibacterium epidermidis
Microbacterium imperiale
Brevibacterium linens
Brevibacterium luteolum
Brevibacterium mcbrellneri
Microbacterium oxydans
Brevibacterium ravenspurgense
Brevibacterium sanguinis
Corynebacterium vitaeruminis
Cellulomonas
Cellulosimicrobium cellulans
Cellulomonas hominis
Cellulomonas humilata
Cellulosimicrobium
Cellulosimicrobium cellulans
Corynebacterium
Corynebacterium accolens
Corynebacterium afermentans
Corynebacterium afermentans ss afermentans
Corynebacterium afermentans ss lipophilum
Corynebacterium ammoniagenes
Corynebacterium amycolatum
Corynebacterium appendicis
Corynebacterium aquilae
Corynebacterium argentoratense
Corynebacterium atypicum
Corynebacterium aurimucosum
Corynebacterium auris
Corynebacterium auriscanis
Corynebacterium beticola
Corynebacterium bovis
Corynebacterium callunae
Corynebacterium camporealensis
Corynebacterium capitovis
Corynebacterium casei
Corynebacterium caspium
Corynebacterium ciconiae
Corynebacterium confusum
Corynebacterium coyleae
Corynebacterium cystitidis
Corynebacterium durum
Corynebacterium efficiens
Rhodococcus equi
Corynebacterium falsenii
Rhodococcus fascians
Corynebacterium felinum
Corynebacterium flavescens
Corynebacterium striatum
Corynebacterium freneyi
Corynebacterium genitalium
Corynebacterium glaucum
Corynebacterium glucuronolyticum
Corynebacterium glutamicum
Corynebacterium halotolerans
Arcanobacterium haemolyticum
Corynebacterium hoagii
Corynebacterium pseudodiphtheriticum
Corynebacterium imitans
Corynebacterium jeikeium
Corynebacterium kroppenstedtii
Corynebacterium kutscheri
Corynebacterium glutamicum
Corynebacterium lipophiloflavum
Corynebacterium macginleyi
Corynebacterium manihot
Corynebacterium massiliense
Corynebacterium mastitidis
Corynebacterium matruchotii
Corynebacterium mediolanum
Corynebacterium minutissimum
Corynebacterium variabile
Corynebacterium mucifaciens
Corynebacterium murisepticum
Corynebacterium kutscheri
Corynebacterium mycetoides
Corynebacterium nephridii
Corynebacterium aurimucosum
Corynebacterium pseudotuberculosis
Tsukamurella paurometabola
Corynebacterium phocae
Corynebacterium pilosum
Corynebacterium propinquum
Corynebacterium pseudodiphtheriticum
Corynebacterium pseudogenitalium
Corynebacterium pseudotuberculosis
Corynebacterium pseudotuberculostearicum
Trueperella pyogenes
Corynebacterium pyruviciproducens
Corynebacterium renale
Corynebacterium resistens
Corynebacterium riegelii
Corynebacterium rubrum
Corynebacterium glucuronolyticum
Corynebacterium simulans
Corynebacterium singulare
Corynebacterium sphenisci
Corynebacterium spheniscorum
Corynebacterium striatum
Corynebacterium suicordis
Corynebacterium sundsvallense
Corynebacterium tenuis
Corynebacterium terpenotabidum
Corynebacterium testudinoris
Corynebacterium thomssenii
Corynebacterium tuberculostearicum
Corynebacterium tuscaniense
Corynebacterium ulcerans
Corynebacterium urealyticum
Corynebacterium ureicelerivorans
Corynebacterium variabile
Corynebacterium variabile
Corynebacterium viscosum
Corynebacterium vitaeruminis
Corynebacterium vitaeruminis
Corynebacterium vitaeruminis
Corynebacterium xerosis
Corynebacterium species, not Corynebacterium diphtheriae
Corynebacterium species not Corynebacterium jeikeium
Toxigenic Corynebacterium
Coryneform bacteria
Cutibacterium
Cutibacterium acnes
Dermabacter
Dermabacter hominis
Dermacoccus
Dermacoccus nishinomiyaensis
Diphtheroids
Aerobic diphtheroids
Anaerobic diphtheroids
Exiguobacterium
Exiguobacterium acetylicum
Microbacterium arborescens
Microbacterium maritypicum
Microbacterium maritypicum
Gordonia
Gordonia bronchialis
Gordonia otitidis
Gordonia polyisoprenivorans
Gordonia rubripertincta
Gordonia rubripertincta
Gordonia sputi
Gordonia terrae
Janibacter
Janibacter hoylei
Kocuria
Kocuria rosea
Kocuria kristinae
Kocuria rosea
Kocuria varians
Kytococcus
Kytococcus sedentarius
Leifsonia
Leifsonia aquatica
Leifsonia xyli
Microbacterium
Microbacterium arborescens
Microbacterium hydrocarbonoxydans
Microbacterium imperiale
Microbacterium lacticum
Microbacterium liquefaciens
Microbacterium maritypicum
Microbacterium oxydans
Microbacterium paraoxydans
Microbacterium resistens
Micrococcus
Micrococcus antarcticus
Micrococcus luteus
Kocuria kristinae
Micrococcus luteus
Micrococcus lylae
Micrococcus luteus
Micrococcus nishinomiyaensis
Kocuria rosea
Kytococcus sedentarius
Oerskovia
Paenibacillus
Paenibacillus agaridevorans
Paenibacillus alvei
Paenibacillus edaphicus
Paenibacillus validus
Paenibacillus larvae
Paenibacillus lentimorbus
Paenibacillus macerans
Paenibacillus pabuli
Paenibacillus polymyxa
Paenibacillus popilliae
Paenibacillus provencensis
Paenibacillus thiaminolyticus
Paenibacillus urinalis
Paenibacillus validus
Aerococcus urinaeequi
Staphylococcus saccharolyticus
Propionibacterium
Propionibacterium acidipropionici
Cutibacterium acnes
Propionibacterium australiense
Propionibacterium avidum
Propionibacterium cyclohexanicum
Propionibacterium freudenreichii
Propionibacterium granulosum
Propioniferax innocus
Propionibacterium jensenii
Propionibacterium lymphophilum
Propionibacterium microaerophilum
Propionibacterium prionicus
Propionibacterium propionicum
Propionibacterium thoenii
Propionibacterium thoenii
Propioniferax
Propioniferax innocus
Rhodococcus
Tsukamurella paurometabola
Gordonia bronchialis
Gordonia sputi
Rhodococcus equi
Rhodococcus erythropolis
Rhodococcus fascians
Rhodococcus globerulus
Rhodococcus gordoniae
Rhodococcus fascians
Gordonia sputi
Rhodococcus rhodochrous
Rhodococcus rhodochrous
Gordonia rubripertincta
Gordonia terrae
Roseomonas
Roseomonas cervicalis
Roseomonas gilardii
Roseomonas mucosa
Rothia
Rothia aeria
Rothia dentocariosa
Rothia mucilaginosa
Rummeliibacillus
Rummeliibacillus pycnus
Micrococcus luteus
Small-colony-forming beta-hemolytic group A streptococci
Small-colony-forming beta-hemolytic group C streptococci
Small-colony-forming beta-hemolytic group G streptococci
Solibacillus
Solibacillus silvestris
Staphylococcus arlettae
Staphylococcus auricularis
Staphylococcus capitis
Staphylococcus capitis ss capitis
Staphylococcus capitis subspecies urealyticus
Staphylococcus caprae
Staphylococcus carnosus
Staphylococcus carnosus carnosus
Staphylococcus carnosus utilis
Staphylococcus chromogenes
Staphylococcus cohnii
Staphylococcus cohnii ss cohnii
Staphylococcus cohnii subspecies urealyticus
Staphylococcus condimenti
Staphylococcus epidermidis
Staphylococcus equorum
Staphylococcus equorum equorum
Staphylococcus equorum linens
Staphylococcus felis
Staphylococcus fleurettii
Staphylococcus gallinarum
Staphylococcus haemolyticus
Staphylococcus hominis
Staphylococcus hominis hominis
Staphylococcus hominis novobiosepticus
Staphylococcus chromogenes
Staphylococcus kloosii
Staphylococcus lentus
Staphylococcus lugdunensis
Staphylococcus muscae
Staphylococcus nepalensis
Staphylococcus pasteuri
Staphylococcus pettenkoferi
Staphylococcus piscifermentans
Staphylococcus vitulinus
Staphylococcus saccharolyticus
Staphylococcus saprophyticus
Staphylococcus saprophyticus ss bovis
Staphylococcus saprophyticus ss saprophyticus
Staphylococcus schleiferi ss. schleiferi
Staphylococcus sciuri
Staphylococcus sciuri carnaticus
Staphylococcus lentus
Staphylococcus sciuri rodentium
Staphylococcus scuiri scuiri
Staphylococcus simulans
Staphylococcus succinus
Staphylococcus succinus casei
Staphylococcus succinus ss. succinus
Staphylococcus vitulinus
Staphylococcus warneri
Staphylococcus xylosus
Staphylococcus, coagulase negative
Rothia mucilaginosa
Streptococcus alactolyticus
Streptococcus anginosus group
Streptococcus anginosus
Streptococcus anginosus group
Streptococcus anginosus-constellatus
Streptococcus australis
Streptococcus bovis group
Streptococcus gallolyticus
Streptococcus constellatus
Streptococcus constellatus subspecies constellatus
Streptococcus constellatus subspecies pharyngis
Streptococcus criceti
Streptococcus cristatus
Streptococcus dentisani
Streptococcus dolonei
Streptococcus equinus
Streptococcus ferus
Streptococcus gallolyticus
Streptococcus gallolyticus subspecies gallolyticus
Streptococcus gallolyticus subspecies macedonicus
Streptococcus gallolyticus subspecies pasteurianus
Streptococcus gordonii
Streptococcus hyovaginalis
Streptococcus infantarius
Streptococcus lutetiensis
Streptococcus infantarius subspecies infantarius
Streptococcus infantis
Streptococcus intermedius
Streptococcus alactolyticus
Streptococcus lutetiensis
Streptococcus macacae
Streptococcus anginosus group
Streptococcus mitis
Streptococcus mitis group
Streptococcus mutans
Streptococcus mutans group
Streptococcus oligofermentans
Streptococcus oralis
Streptococcus parasanguinis
Streptococcus gallolyticus subspecies pasteurianus
Streptococcus peroris
Streptococcus pseudopneumoniae
Streptococcus ratti
Streptococcus salivarius
Streptococcus salivarius group
Streptococcus salivarius subsp. salivarius
Streptococcus salivarius subsp. thermophilus
Streptococcus sanguinis
Streptococcus sanguinis group
Streptococcus sinensis
Streptococcus sobrinus
Streptococcus salivarius subsp. thermophilus
Streptococcus tigurinus
Streptococcus vestibularis
Streptococcus, group F
Trueperella
Trueperella bernardiae
Trueperella pyogenes
Tsukamurella
Tsukamurella inchonensis
Tsukamurella paurometabola
Tsukamurella pulmonis
Tsukamurella strandjordii
Tsukamurella tyrosinosolvens
Turicella
Turicella otitidis
Virgibacillus
Virgibacillus pantothenticus
Streptococcus, viridans group
 the absence of an organism to mean the event is
guidance on appropriate reporting.

SNOMED Code
3174002
40560008
704975008
59806008
427237005
426330001
113414004
419012004
113415003
113416002
113417006
427269001
46369004
3174002
8940004
425520001
877802991000087109
12069003
425488009
447175005
258933002
427691003
113421004
113422006
409827009
33529006
9008009
409818008
427222006
243230001
430979003
409819000
78803006
713921004
427413007
51714009
704975008
44723000
428939003
258933002
56214009
113432004
127496003
428949000
113433009
113434003
428950000
428038008
44955005
417608004
113435002
113436001
429762004
428332000
429237000
3840003
113437005
48276002
429238005
427847001
127497007
428270003
113438000
428337006
113439008
113440005
429001000
446485009
113441009
113442002
113443007
62636004
428338001
428048005
113444001
428277000
429003002
428049002
704978005
429111005
33287009
112273008
113446004
11575001
113447008
113448003
114063000
44762009
428272006
446486005
429112003
114115001
90547001
428278005
114088008
82289003
423188000
429004008
429115001
113450006
72997009
33457001
429638004
429246006
39232002
427831003
114117009
447039005
113451005
114118004
84408007
413618005
113452003
71812004
413619002
113453008
113454002
81346002
113455001
445081000
429116000
113456000
428129008
8501000146105
113457009
429137008
429348009
35784003
13430008
113458004
417062004
427859002
429118004
428387004
114115001
427864003
429034003
113460002
445082007
29100001
113462005
113464006
113465007
113467004
429138003
429139006
429035002
447040007
429145003
432698009
113468009
429127003
113469001
447041006
429126007
114098002
114121002
414989004
3020006
74867004
429675009
114101003
413620008
429206000
87850009
424425003
445083002
79109002
113471001
113472008
429210002
428576008
33900003
113473003
428577004
429747001
429212005
428958007
429468004
113487003
114103000
84897001
114109001
114122009
43131009
428962001
442283002
114105007
414990008
113474009
113475005
429077002
1810009
113476006
112274002
16580009
450459009
113478007
428588005
428966003
429221006
429471007
113479004
428972003
84789000
428973008
429472000
113480001
429486001
83512007
413621007
447068006
427760003
427764007
447069003
429760007
113481002
113482009
113483004
36302007
114106008
64840009
34498004
114107004
113484005
113485006
429488000
429229008
429230003
413622000
413352001
89922004
114114002
114115001
114117009
114118004
114121002
114122009
3603008
113607008
6405003
57301000
114203008
112278004
409826000
431099002
414713001
446348002
431681006
116390001
114188006
409862004
114196001
431580002
409860007
409862004
77086004
243254006
113608003
113609006
113610001
113607008
113611002
423659000
424012003
417499006
424209005
385503009
413925000
424389005
432270000
44885001
88866008
424560007
424721008
424906005
422791000
424459004
417134008
116461008
50169005
413926004
423379003
80771008
116389005
28901005
423568009
47802009
63815007
416914001
243260006
432808003
413927008
89651003
424529007
44723000
54276004
12050008
413928003
63410006
363777001
88575000
89651003
416863001
363772007
243261005
446285007
424709009
89922004
243262003
83594007
11575001
413929006
302583000
88575000
58879005
243263008
385503009
55084001
113510005
116462001
81368007
113612009
12050008
243264002
55084001
416570006
258933002
450383002
62000003
442804004
131241009
243265001
413927008
416655000
422898002
422705004
432362008
63815007
423784007
425307003
72243003
422496009
424212008
416311000
416356007
450409000
103428000
113613004
429443001
11575001
11575001
243266000
116390001
116390001
116390001
27101006
413931002
413930001
397426001
116442009
763051006
39473003
413976002
413977006
115142006
113776005
54642001
44661006
26481006
114178005
114179002
414699006
414710003
414710003
115143001
113646005
443659007
420096009
113647001
113647001
113648006
113649003
409828004
698246003
414328004
113773002
113772007
113773002
113774008
115141004
113775009
414590004
414591000
414596005
114199008
414699006
414707005
114203008
114204002
114063000
414710003
414713001
414714007
414716009
52864008
416555005
48299003
113772007
48299003
61376003
48299003
67084000
113773002
113775009
81194007
114086007
429907003
114088008
8501000146105
114107004
114098002
414989004
114101003
114103000
114105007
414990008
438962008
114106008
445240003
114107004
430979003
41103009
34844008
2379005
39473003
433037008
47473006
113916009
23871008
87755005
114056000
86720000
26102005
431383004
113919002
427413007
30087004
30087004
114055001
114056000
34534002
113510005
113646005
113648006
80771008
22478004
28901005
44348004
430885009
28901005
113648006
54379008
54379008
113647001
113649003
115159001
113711006
113710007
415351006
90163001
417029007
35379007
416544005
450458001
450459009
48299003
415534000
415535004
415536003
699375003
429471007
72465001
45654003
40347003
113962001
103492009
76969000
9784002
438905007
438733001
56629004
66872005
113963006
103493004
439185000
60875001
28217008
438005005
438164005
113965004
438257002
8056006
83452006
44827007
432505008
438202004
56629004
53227003
40253001
103494005
113969005
438681002
103495006
428731005
113970006
440569005
41103009
19743000
113972003
113973008
103496007
70806002
113975001
40253001
113976000
113977009
52122005
438729008
440815004
441130000
440569005
63550006
32737005
116197008
416544005
34228005
415597009
44304009
415597009
70160008
415598004
415599007
113985000
76199005
415601009
415602002
34838009
113980005
708952006
12704003
72646003
10049004
113985000
421544007
421004005
421253004
113986004
113988003
415603007
415605000
432506009
415604001
62170002
34228005
415605000
59717000
415597009
57997003
127539005
214001
127536003
440296007
19870004
113990002
421253004
416347004
420470004
10667007
39888004
127537007
84684000
23310006
113993000
115658008
438909001
43777007
23310006
699479005
113998009
83503005
704974007
704975008
258933002
115135006
113509000
113510005
113511009
417316004
113512002
415762009
415763004
114108009
114109001
31703004
 It is possible that your laboratory may identify an organism that cannot be found when referencing the NHSN Org
event is not reportable. If you have an organism which is not found on the NHSN Organism List, please contact u

NHSN Code NHSN Display Name

ABISP Abiotrophia
GRADJ*2 Abiotrophia adiacens
GRADJ*3 Abiotrophia adjacens
STRDF Abiotrophia defectiva
GRANELEG*1 Abiotrophia elegans
ALISTSP Alistipes
BACPU Alistipes putredinis
ALLOSSP Alloscardovia
ALLOOMNI Alloscardovia omnicolens
ASNSP Alpha-hemolytic Streptococcus, not S pneumoniae
ANAGNR Anaerobic Gram-negative bacillus
ANSP Anaerobiospirillum
ANSU Anaerobiospirillum succiniciproducens
ANTHOM Anaerobiospirillum thomasii
ANASP Anaerococcus
PPSHY Anaerococcus hydrogenalis
ANALAC Anaerococcus lactolyticus
ANAOCTA Anaerococcus octavius
ANAPRE Anaerococcus prevotii
ANATETR Anaerococcus tetradius
ANAVAG Anaerococcus vaginalis
ANRSP Anaerorhabdus
ANRFU Anaerorhabdus furcosus
ACOSP Arcobacter
ACOBUTZ Arcobacter butzleri
ACONI Arcobacter nitrofigilis
ATOSP Atopobium
ATOFOSS Atopobium fossor
ATOMIN Atopobium minutum
ATOPAR Atopobium parvulum
ATORIM Atopobium rimae
ATOVAGI Atopobium vaginae
AVERSP Averyella
CANLIP*1 Azymoprocandida lipolytica
BAS Bacteroides
PREBI*1 Bacteroides bivius
PREBC*2 Bacteroides buccae
PREBU*1 Bacteroides buccalis
BACCC Bacteroides caccae
PSEFCAPI*1 Bacteroides capillosus
PREBC*3 Bacteroides capillus
CLOCL*1 Bacteroides clostridiiformis
BACCG Bacteroides coagulans
PRECO*1 Bacteroides corporis
PREDE*1 Bacteroides denticola
PREDI*1 Bacteroides disiens
BACDT*1 Bacteroides distasonis
BACEG Bacteroides eggerthii
POREN*1 Bacteroides endodontalis
BF Bacteroides fragilis
BFG Bacteroides fragilis group
ANRFU*1 Bacteroides furcosus
PORGI*1 Bacteroides gingivalis
PARAGOLD*1 Bacteroides goldsteinii
PREHE*1 Bacteroides heparinolyticus
MEGAHYPE*2 Bacteroides hypermegas
PREIN*1 Bacteroides intermedius
PORLE*1 Bacteroides levii
PORSA*1 Bacteroides macacae
BACMASS Bacteroides massiliensis
PREM*1 Bacteroides melaninogenicus
BACMR*1 Bacteroides merdae
MITML*2 Bacteroides multiacidus
DICNO*1 Bacteroides nodosus
BACNORD Bacteroides nordii
CAPOC*1 Bacteroides ochraceus
PREOR*1 Bacteroides oralis
PREOS*1 Bacteroides oris
PREOU*1 Bacteroides oulorum
BACOV Bacteroides ovatus
PREBC*1 Bacteroides pentosaceus
TISPR*1 Bacteroides praeacutus
BACPU*1 Bacteroides putredinis
BACPYOG Bacteroides pyogenes
PRERU*1 Bacteroides ruminicola
PORSA*2 Bacteroides salivosus
BACSP*1 Bacteroides splanchnicus
BACST Bacteroides stercoris
BACPYOG*1 Bacteroides suis
BACPYOG*2 Bacteroides tectus
BACTH Bacteroides thetaiotaomicron
BACUN Bacteroides uniformis
PREVE*1 Bacteroides veroralis
BACVU Bacteroides vulgatus
PREZO Bacteroides zoogleoformans
BIFSP Bifidobacterium
BIFADOL Bifidobacterium adolescentis
BIFANGU Bifidobacterium angulatum
BIFDE*1 Bifidobacterium appendicitis
BIFBI Bifidobacterium bifidum
BIFBR Bifidobacterium breve
BIFCATE Bifidobacterium catenulatum
BIFDE Bifidobacterium dentium
BIFDE*2 Bifidobacterium ericksonii
BIFGALL Bifidobacterium gallicum
BIFINF Bifidobacterium infantis
BIFLO Bifidobacterium longum
BIFPSEU Bifidobacterium pseudocatenulatum
BIFSCAR Bifidobacterium scardovii
BIFLO*1 Bifidobacterium suis
BILSP Bilophila
BILWA Bilophila wadsworthia
BLAUSP Blautia
BLAUCOCC Blautia coccoides
RUMHAN Blautia hansenii
BLAUPROD Blautia producta
BUTSP Buttiauxella
BUTAG Buttiauxella agrestis
BUTBREN Buttiauxella brennerae
BUTFERR Buttiauxella ferragutiae
BUTGAVI Buttiauxella gaviniae
BUTIZAR Buttiauxella izardii
BUTNO Buttiauxella noackiae
BUTWARM Buttiauxella warmboldiae
EUBLI*1 Butyribacterium rettgeri
KLEGRA*1 Calymmatobacterium granulomatis
ACOBUTZ*1 Campylobacter butzleri
HELCI*1 Campylobacter cinaedi
HELFE*1 Campylobacter fennelliae
HELMU*2 Campylobacter mustelae
ACONI*1 Campylobacter nitrofigilis
HELPY*1 Campylobacter pylori
CAS Candida
CA Candida albicans
CANST*1 Candida albicans var stellatoidea
CAAUR Candida auris
CANBRAC Candida bracarensis
CANCAT*2 Candida brumptii
CANCAT Candida catenulata
CANCIF Candida ciferrii
CANDUB Candida dubliniensis
CANDUOB Candida duobushaemulonii
CG Candida glabrata
CANGU Candida guilliermondii
CANGUI Candida guilliermondii var membranaefaciens
CANHAE Candida haemulonii
CANINC Candida inconspicua
CANINT Candida intermedia
CANKEF Candida kefyr
CK Candida krusei
CANLAM Candida lambica
CANLIP Candida lipolytica
CANLU Candida lusitaniae
CANMETA Candida metapsilosis
CANNIVA Candida nivariensis
CANNOR Candida norvegensis
CANLU*2 Candida obtusa
CANORTH Candida orthopsilosis
CP Candida parapsilosis
CANPARACOM Candida parapsilosis complex
CANLU*1 Candida parapsilosis var obtusa
CANPARA Candida pararugosa
CANPEL Candida pelliculosa
CANPIN Candida pintolopesii
CANPUL Candida pulcherrima
CANCAT*1 Candida ravautii
CANRUG Candida rugosa
CANSAKE Candida sake
CANPIN*2 Candida slooffii
CANST Candida stellatoidea
CANDSTEL Candida stellimalicola
CT Candida tropicalis
CANUTI Candida utilis
CANVIN Candida vini
CANVIS Candida viswanathii
CANZEY Candida zeylanoides
CAPSP Capnocytophaga
CAPCA Capnocytophaga canimorsus
CAPCYNO Capnocytophaga cynodegmi
CAPGI Capnocytophaga gingivalis
CAPGRAN Capnocytophaga granulosa
CAPHEMO Capnocytophaga haemolytica
CAPOC Capnocytophaga ochracea
CAPST Capnocytophaga sputigena
ENC*4 carbapenem resistant Enterobacter cloacae
KP*3 carbapenem resistant Klebsiella pneumoniae
CEDSP Cedecea
CEDDA Cedecea davisae
CEDLA Cedecea lapagei
CEDNE Cedecea neteri
CS Citrobacter
CITAM Citrobacter amalonaticus
CITBRA Citrobacter braakii
CITKO*1 Citrobacter diversus
CITA1 Citrobacter farmeri
CF Citrobacter freundii
CITGILL Citrobacter gillenii
CITKO Citrobacter koseri
CITMURL Citrobacter murliniae
CITRODE Citrobacter rodentium
CITSED Citrobacter sedlakii
CITWER Citrobacter werkmanii
CITYOU Citrobacter youngae
CLOSTRSP Clostridioides
CLS Clostridium
CLOSAR*1 Clostridium absonum
CLOAR Clostridium argentinense
CLOBA*3 Clostridium barati
CLOBA Clostridium baratii
EUBBARK*1 Clostridium barkeri
CLOBART Clostridium bartlettii
CLOBEIJ Clostridium beijerinckii
CLOBI Clostridium bifermentans
CLOBOLT Clostridium bolteae
CLOBO Clostridium botulinum
CLOBU Clostridium butyricum
CLOCA Clostridium cadaveris
CLOCN Clostridium carnis
CLOCELE Clostridium celerecrescens
CLOCL Clostridium clostridioforme
CLOCO Clostridium cochlearium
CLOCOCL Clostridium cocleatum
CLODISP Clostridium disporicum
CLOFA Clostridium fallax
CLOGH*1 Clostridium ghoni
CLOGH Clostridium ghonii
CLOGL Clostridium glycolicum
CLOHA Clostridium haemolyticum
CLOHT Clostridium hastiforme
CLOHATH Clostridium hathewayi
CLOHI Clostridium histolyticum
CLOID Clostridium indolis
CLOIN Clostridium innocuum
CLOINTE Clostridium intestinale
CLOIR Clostridium irregulare
CLOIR*1 Clostridium irregularis
CLOCO*1 Clostridium lentoputrescens
CLOLEPT Clostridium leptum
CLOLI Clostridium limosum
CLOMA Clostridium malenominatum
CLONOVY Clostridium novyi
FLAVPLAU*1 Clostridium orbiscindens
CLOOR Clostridium oroticum
CLOBA*1 Clostridium paraperfringens
CLOPU Clostridium paraputrificum
CLOBA*2 Clostridium perenne
CLP Clostridium perfringens
CLOFA*1 Clostridium pseudofallax
CLOBU*1 Clostridium pseudotetanicum
CLOPS Clostridium putrefaciens
CLORA Clostridium ramosum
CLOSAR Clostridium sardiniense
CLOSE Clostridium septicum
CLOSO Clostridium sordellii
CLOSH Clostridium sphenoides
CLOSPIR Clostridium spiroforme
CLOSP Clostridium sporogenes
CLOSPOR Clostridium sporosphaeroides
CLOSU Clostridium subterminale
CLOSY Clostridium symbiosum
CLOTE Clostridium tertium
CLOTT Clostridium tetani
FILVIL*1 Clostridium villosum
CLONPERF Clostridium, not C. perfringens
COSP Coliform bacteria
COLLSP Collinsella
COLAER Collinsella aerofaciens
COLLINTE Collinsella intestinalis
COLLSTER Collinsella stercoris
CROSP Cronobacter
CRODUB Cronobacter dublinensis
CROMAL Cronobacter malonaticus
CROMUY Cronobacter muytjensii
CROSAK Cronobacter sakazakii
CROTUR Cronobacter turicensis
CANPARA*1 Cryptococcus aggregatus
CANUTI*1 Cryptococcus utilis
DIALSP Dialister
DIALMICR Dialister micraerophilus
DIALPNEU Dialister pneumosintes
DICSP Dichelobacter
DICNO Dichelobacter nodosus
EDWSP Edwardsiella
EDWTR*1 Edwardsiella anguillimortifera
EDWHO Edwardsiella hoshinae
EDWIC Edwardsiella ictaluri
EDWTR Edwardsiella tarda
EGGESP Eggerthella
EUBLE Eggerthella lenta
EGGESINE Eggerthella sinesis
EGGERSP Eggerthia
LACCA Eggerthia catenaformis
ESP Enterobacter
EA*1 Enterobacter aerogenes
PANAG*2 Enterobacter agglomerans
PANAG*1 Enterobacter agglomerans group
ENTAU Enterobacter amnigenus
ENTAB Enterobacter asburiae
ENTCAN Enterobacter cancerogenus
ENC Enterobacter cloacae
ENCCX Enterobacter cloacae complex
ENTEDISS Enterobacter cloacae dissolvens
ENTECOWA*1 Enterobacter cowanii
ENTEDISS*2 Enterobacter dissolvens
ENTGE*1 Enterobacter gergoviae
HA*1 Enterobacter hafniae
ENTHO Enterobacter hormaechei
KLUINTE*1 Enterobacter intermedius
ENTEKOBE Enterobacter kobei
SL*1 Enterobacter liquefaciens
ENTELUDW Enterobacter ludwigii
ENTENIMI*2 Enterobacter nimipressuralis
ENTEPYRI*1 Enterobacter pyrinus
ENOT Enterobacteriaceae
ENTSP Enterococcus
ENTEASIN Enterococcus asini
ENTA Enterococcus avium
ENTECANI Enterococcus canis
ENTCA Enterococcus casseliflavus
ENTECECO Enterococcus cecorum
ENTDI Enterococcus dispar
ENTD Enterococcus durans
ENTFS Enterococcus faecalis
ENTFM Enterococcus faecium
ENTCA*1 Enterococcus flavescens
ENTGA Enterococcus gallinarum
ENTEGILV Enterococcus gilvus
ENTEHAEM Enterococcus haemoperoxidus
ENTEHERM Enterococcus hermanniensis
ENTHR Enterococcus hirae
ENTEITAL Enterococcus italicus
ENTMA Enterococcus malodoratus
ENTEMORA Enterococcus moraviensis
ENTMU Enterococcus mundtii
ENTEPALL Enterococcus pallens
ENTEPHOE Enterococcus phoeniculicola
ENTPS Enterococcus pseudoavium
ENTRA Enterococcus raffinosus
ENTERATT Enterococcus ratti
ENTESACC Enterococcus saccharolyticus
ENTEITAL*1 Enterococcus saccharominimus
TETRSOLI*1 Enterococcus solitarius
ENTESULF Enterococcus sulfureus
ENTEVILL Enterococcus villorum
PANANAN*1 Erwinia ananas
ENTCAN*2 Erwinia cancerogena
ENTEDISS*1 Erwinia dissolvens
PANAG*3 Erwinia herbicola-Enterobacter agglomerans group
ENTENIMI*1 Erwinia nimipressuralis
PANANAN*2 Erwinia uredovora
ESCSP Escherichia
LECAD*1 Escherichia adecarboxylata
ESCALB Escherichia albertii
EC Escherichia coli
ESCFE Escherichia fergusonii
ESCHE Escherichia hermannii
ESCVU Escherichia vulneris
EUBSP Eubacterium
COLAER*1 Eubacterium aerofaciens
PSALA*1 Eubacterium alactolyticum
EUBBARK Eubacterium barkeri
EUBBIFO Eubacterium biforme
EUBBR Eubacterium brachy
EUBBUDA Eubacterium budayi
EUBBUDA*1 Eubacterium cadaveris
EUBCALL Eubacterium callanderi
EUBCM Eubacterium combesii
EUBCN Eubacterium contortum
EUBCYLI Eubacterium cylindroides
EUBDOLI Eubacterium dolichum
EUBELIG Eubacterium eligens
SLACEXIG*1 Eubacterium exiguum
ATOFOSS*1 Eubacterium fossor
EUBHADR Eubacterium hadrum
EUBHALL Eubacterium hallii
EUBINFI Eubacterium infirmum
EUBLE*1 Eubacterium lentum
EUBLI Eubacterium limosum
EUBMINU Eubacterium minutum
EUBMO Eubacterium moniliforme
EUBNI Eubacterium nitrogenes
EUBNO Eubacterium nodatum
FLAVPLAU*2 Eubacterium plautii
EUBRAMU Eubacterium ramulus
EUBRECT Eubacterium rectale
EUBSA Eubacterium saburreum
EUBSAPH Eubacterium saphenum
EUBSIRA Eubacterium siraeum
EUBSUL Eubacterium sulci
EUBTE Eubacterium tenue
MOGTIM*1 Eubacterium timidum
EUBVENT Eubacterium ventriosum
EUBYU Eubacterium yurii
EWISP Ewingella
EWIAM Ewingella americana
CF*3 Extended spectrum beta-lactamase producing Citrobacter freundii
ENC*5 Extended spectrum beta-lactamase producing Enterobacter cloacae
EC*1 Extended spectrum beta-lactamase producing Escherichia coli
KO*1 Extended spectrum beta-lactamase producing Klebsiella oxytoca
KP*4 Extended spectrum beta-lactamase producing Klebsiella pneumoniae
PM*2 Extended spectrum beta-lactamase producing Proteus mirabilis
FAECSP Faecalibacterium
FAECPRAU Faecalibacterium prausnitzii
FILISP Filifactor
FILALO Filifactor alocis
FILVIL Filifactor villosus
FINESP Finegoldia
FINMAG Finegoldia magna
FLAVSP Flavonifractor
FLAVPLAU Flavonifractor plautii
FSU Fusobacterium
FILALO*1 Fusobacterium alocis
FUSCANI Fusobacterium canifelinum
FUSEQUI Fusobacterium equinum
FUSGO Fusobacterium gonidiaformans
FUSMO Fusobacterium mortiferum
FUSNA Fusobacterium naviforme
FUSNC Fusobacterium necrogenes
FUSNE Fusobacterium necrophorum
FUSND Fusobacterium necrophorum fundiliforme
FUSNN Fusobacterium necrophorum necrophorum
FUSNU Fusobacterium nucleatum
FUSNS Fusobacterium nucleatum fusiforme
FUSNL Fusobacterium nucleatum nucleatum
FUSNP Fusobacterium nucleatum polymorphum
FUSPE Fusobacterium periodonticum
FLAVPLAU*3 Fusobacterium plauti
FUSNP*1 Fusobacterium polymorphum
FAECPRAU*1 Fusobacterium prausnitzii
FUSRU Fusobacterium russii
EUBSUL*1 Fusobacterium sulci
FUSUL Fusobacterium ulcerans
FUSVA Fusobacterium varium
GEMSP Gemella
GEMBERG Gemella bergeriae
GEMHA Gemella haemolysans
GEMMO Gemella morbillorum
GEMSANG Gemella sanguinis
GEOTR Geotrichum
GEOCAN Geotrichum candidum
GEOTRKLEB Geotrichum klebahnii
GEOTRKLEB*1 Geotrichum penicillatum
GRANSP Granulicatella
GRADJ Granulicatella adiacens
GRANELEG Granulicatella elegans
HAFSP Hafnia
HA Hafnia alvei
PICANGU*2 Hansenula angusta
PICANA*1 Hansenula anomala
HELCSP Helcococcus
HELCKUNZ Helcococcus kunzii
HELCSUEC Helcococcus sueciensis
HELSP Helicobacter
HELACIN Helicobacter acinonychis
HELACIN*1 Helicobacter acinonyx
HELAURA Helicobacter aurati
HELBILI Helicobacter bilis
HELBIZZ Helicobacter bizzozeroni
HELCANA Helicobacter canadensis
HELCANI Helicobacter canis
HELCHOL Helicobacter cholecystus
HELCI Helicobacter cinaedi
HELFELI Helicobacter felis
HELFE Helicobacter fennelliae
HELGANM Helicobacter ganmani
HELHEPA Helicobacter hepaticus
HELMESO Helicobacter mesocricetorum
HELMURI Helicobacter muridarum
HELMU Helicobacter mustelae
HELPY*2 Helicobacter nemestrinae
HELPAME Helicobacter pametensis
HELPULL Helicobacter pullorum
HELPY Helicobacter pylori
HELRA Helicobacter rappini
HELRODE Helicobacter rodentium
HELSALO Helicobacter salomonis
HELTROG Helicobacter trogontum
HELTYPH Helicobacter typhlonius
KS Klebsiella
EA Klebsiella aerogenes
KLEGRA Klebsiella granulomatis
RAOORN*1 Klebsiella ornithinolytica
KO Klebsiella oxytoca
KLEOZ*1 Klebsiella ozaenae
RAOPLA*1 Klebsiella planticola
KP Klebsiella pneumoniae
KLEOZ Klebsiella pneumoniae ozaenae
KLEPNE Klebsiella pneumoniae pneumoniae
KLERH Klebsiella pneumoniae rhinoscleromatis
KLERH*1 Klebsiella rhinoscleromatis
KLESING Klebsiella singaporensis
RAOTER*1 Klebsiella terrigena
RAOPLA*2 Klebsiella trevisanii
KLEVARI Klebsiella variicola
KLUSP Kluyvera
KLUAS Kluyvera ascorbata
KLUCR Kluyvera cryocrescens
KLUGEOR Kluyvera georgiana
KLUINTE Kluyvera intermedia
KLUYSP Kluyveromyces
KLUYMAR*3 Kluyveromyces fragilis
KLUYLAC Kluyveromyces lactis
KLUYMAR Kluyveromyces marxianus
KOSASP Kosakonia
ENTECOWA Kosakonia cowanii
YOKRE*2 Koserella trabulsii
LS Lactobacillus
LACAC Lactobacillus acidophilus
LACAM Lactobacillus amylovorus
LACANTR Lactobacillus antri
LACPLAN*1 Lactobacillus arizonensis
LACBRE Lactobacillus brevis
LACBUCH Lactobacillus buchneri
LACCS Lactobacillus casei
LACCA*2 Lactobacillus catenaformis
LACFER*1 Lactobacillus cellobiosus
WEISCONF*1 Lactobacillus confusus
LACCR Lactobacillus crispatus
LACDELB Lactobacillus delbrueckii
LACFER Lactobacillus fermentum
LACGA Lactobacillus gasseri
LACGAST Lactobacillus gastricus
LACINER Lactobacillus iners
LACJEN Lactobacillus jensenii
LACJO Lactobacillus johnsonii
LACKALI Lactobacillus kalixensis
ATOMIN*1 Lactobacillus minutus
LACOR Lactobacillus oris
LACPARA Lactobacillus paracasei
LACPLAN Lactobacillus plantarum
LACREUT Lactobacillus reuteri
LACRHAM Lactobacillus rhamnosus
ATORIM*1 Lactobacillus rimae
LACSAKE Lactobacillus sakei
LACSALI Lactobacillus salivarius
LACULTU Lactobacillus ultunensis
LACVA Lactobacillus vaginalis
LACVITU Lactobacillus vitulinus
LECSP Leclercia
LECAD Leclercia adecarboxylata
LELLSP Lelliottia
ENTAU*1 Lelliottia amnigena
ENTENIMI Lelliottia nimipressuralis
LEMSU Leminorella
LEMGR Leminorella grimontii
LEMRI Leminorella richardii
LEPTS Leptotrichia
EUBSA*1 Leptotrichia aerogenes
LEPTB Leptotrichia buccalis
LEPTGOOD Leptotrichia goodfellowii
LEPTTREV Leptotrichia trevisanii
LEPTWADE Leptotrichia wadei
LEUC Leuconostoc
LEUCI*1 Leuconostoc amelibiosum
LEUCI Leuconostoc citreum
LEULA Leuconostoc lactis
LEUME Leuconostoc mesenteroides
LEUPS Leuconostoc pseudomesenteroides
CITAM*1 Levinea amalonatica
CITKO*2 Levinea malonitica
MEGASP Megamonas
MEGAHYPE Megamonas hypermegale
MEGAHYPE*1 Megamonas hypermegas
MEGSP Megasphaera
MEGEL Megasphaera elsdenii
MITSP Mitsuokella
PREDEN*1 Mitsuokella dentalis
MITML Mitsuokella multacida
MOESP Moellerella
MOEWI Moellerella wisconsensis
MOGSP Mogibacterium
MOGDIVE Mogibacterium diversum
MOGNEGL Mogibacterium neglectum
MOGTIM Mogibacterium timidum
MOGVESC Mogibacterium vescum
MORSP Morganella
MORMO Morganella morganii
MORSI Morganella morganii sibonii
ENTAB*2 multidrug resistant Enterobacter asburiae
KP*2 multidrug resistant Klebsiella pneumoniae
MORMO*1 multidrug resistant Morganella morganii
ENC*3 multiple drug-resistant Enterobacter cloacae
PM*1 multiple drug-resistant Proteus mirabilis
CANLIP*2 Mycotorula lipolytica
PICSP*1 Nakazawaea
NVS Nutritionally variant streptococci
OBPSU Obesumbacterium
OBESPROT Obesumbacterium proteus
BACSPP Odoribacter
BACSP Odoribacter splanchnicus
PICANGU*1 Ogataea angusta
GEOCAN*1 Oospora lactis
PANOT Pantoea
PANAG Pantoea agglomerans
PANANAN*3 Pantoea ananas
PANANAN Pantoea ananatis
PANDI Pantoea dispersa
PARASP Parabacteroides
BACDT Parabacteroides distasonis
PARAGOLD Parabacteroides goldsteinii
BACMR Parabacteroides merdae
PEPTASAC*2 Peptococcus asaccharolyticus
PEPTSP Peptoniphilus
PEPTASAC Peptoniphilus asaccharolyticus
PEPTHARE Peptoniphilus harei
PEPTIVOR Peptoniphilus ivorii
PEPTLACR Peptoniphilus lacrimalis
PSS Peptostreptococcus
PSA Peptostreptococcus anaerobius
PEPTASAC*1 Peptostreptococcus asaccharolyticus
MEGEL*1 Peptostreptococcus elsdenii
PPSHY*1 Peptostreptococcus hydrogenalis
ANALAC*1 Peptostreptococcus lactolyticus
FINMAG*1 Peptostreptococcus magnus
PARVMICR*1 Peptostreptococcus micros
ANAOCTA*1 Peptostreptococcus octavius
ATOPAR*1 Peptostreptococcus parvulus
ANAPRE*1 Peptostreptococcus prevotii
BLAUPROD*2 Peptostreptococcus productus
ANATET*1 Peptostreptococcus tetradius
ANAVAG*1 Peptostreptococcus vaginalis
PICSP Pichia
PICANGU Pichia angusta
PICANA Pichia anomala
PICFAR Pichia farinosa
PICKUDR Pichia kudriavzevii
PLURSP Pluralibacter
ENTGE Pluralibacter gergoviae
ENTEPYRI Pluralibacter pyrinus
PORSP Porphyromonas
PORAS Porphyromonas asaccharolyticus
PORCANG Porphyromonas cangingivalis
PORCANO Porphyromonas canoris
PORCANS Porphyromonas cansulci
PORCATO Porphyromonas catoniae
PORCIRC Porphyromonas circumdentaria
PORCREV Porphyromonas crevioricanis
POREN Porphyromonas endodontalis
PORGI Porphyromonas gingivalis
PORGING Porphyromonas gingivicanis
PORGULA Porphyromonas gulae
PORLE Porphyromonas levii
PORSA Porphyromonas macacae
PORSA*3 Porphyromonas salivosa
PORSOME Porphyromonas somerae
PRESP Prevotella
PREBI Prevotella bivia
PREBC Prevotella buccae
PREBU Prevotella buccalis
PRECO Prevotella corporis
PREDEN Prevotella dentalis
PREDE Prevotella denticola
PREDI Prevotella disiens
PREENOE Prevotella enoeca
PREHE Prevotella heparinolytica
PREIN Prevotella intermedia
PRELO Prevotella loescheii
PREMARS Prevotella marshii
PREM Prevotella melaninogenica
PREMULT Prevotella multiformis
PREMULTI Prevotella multisaccharivorax
PRENI Prevotella nigrescens
PREOR Prevotella oralis
PREORAL Prevotella oralis group
PREOS Prevotella oris
PREOU*2 Prevotella oulora
PREOU Prevotella oulorum
PREPALL Prevotella pallens
PRERU Prevotella ruminicola
PRESALI Prevotella salivae
PRESHAH Prevotella shahii
PRETANN Prevotella tannerae
PREVE Prevotella veroralis
PREZO*1 Prevotella zoogleoformans
PTS Proteus
PROTHAUS Proteus hauseri
PRVAL*1 Proteus inconstans, subgroup A
PM Proteus mirabilis
PRTMY Proteus myxofaciens
PRTPE Proteus penneri
PR*2 Proteus rettgeri
PV Proteus vulgaris
PRU Providencia
PRVAL Providencia alcalifaciens
PRVRU*2 Providencia friedericiana
PRVHE Providencia heimbachae
PR Providencia rettgeri
PRVRU Providencia rustigianii
PRS Providencia stuartii
PSEFSP Pseudoflavonifractor
PSEFCAPI Pseudoflavonifractor capillosus
PSEUSP Pseudoramibacter
PSALA Pseudoramibacter alactolyticus
RAHSP Rahnella
RAHAQ Rahnella aquatilis
RAOSP Raoultella
RAOORN Raoultella ornithinolytica
RAOPLA Raoultella planticola
RAOTER Raoultella terrigena
ROTSP Rothia
ROTAERI Rothia aeria
ROTDE Rothia dentocariosa
ROTHMU Rothia mucilaginosa
RUMISP Ruminococcus
RUMIGNAV Ruminococcus gnavus
RUMHAN*2 Ruminococcus hansenii
BLAUPROD*1 Ruminococcus productus
SACCH Saccharomyces
SACCER Saccharomyces cerevisiae
SARCISP Sarcina
SARCIVENT Sarcina ventriculi
SSP Serratia
SEREN Serratia entomophila
SERFI Serratia ficaria
SERFO Serratia fonticola
SERGR Serratia grimesii
SL Serratia liquefaciens
SM Serratia marcescens
SR*1 Serratia marinorubra
SEROD Serratia odorifera
SERPL Serratia plymuthica
SERPS Serratia proteamaculans
SERQUIN Serratia quinivorans
SR Serratia rubidaea
SERUREI Serratia ureilytica
SLACSP Slackia
SLACEXIG Slackia exigua
SLACHELI Slackia heliotrinireducens
STRBA Small-colony-forming beta-hemolytic group A streptococci
STRBC Small-colony-forming beta-hemolytic group C streptococci
STRBG Small-colony-forming beta-hemolytic group G streptococci
VEIPA*1 Staphylococcus parvulus
ROTHMU*1 Stomatococcus mucilaginosus
GRADJ*1 Streptococcus adjacens
STRALAC Streptococcus alactolyticus
STRANG*1 Streptococcus anginosis milleri group
STRVN Streptococcus anginosus
STRANG Streptococcus anginosus group
STRAC Streptococcus anginosus-constellatus
STRAUS Streptococcus australis
ENTA*1 Streptococcus avium
STRBOVI Streptococcus bovis group
STRGALL*1 Streptococcus caprinus
ENTCA*2 Streptococcus casseliflavus
ENTECECO*1 Streptococcus cecorum
STRVC Streptococcus constellatus
STRCC Streptococcus constellatus constellatus
STRCP Streptococcus constellatus pharyngis
STRCRC Streptococcus criceti
STRCR Streptococcus cristatus
STRDF*1 Streptococcus defectivus
STRDENT Streptococcus dentisani
STRD Streptococcus downei
ENTD*1 Streptococcus durans
GRANELEG*2 Streptococcus elegans
STRDE Streptococcus equinus
ENTFS*1 Streptococcus faecalis
ENTFM*1 Streptococcus faecium
STRF Streptococcus ferus
ENTGA*1 Streptococcus gallinarum
STRGALL Streptococcus gallolyticus
STRGALGAL Streptococcus gallolyticus gallolyticus
STRGALMAC Streptococcus gallolyticus macedonicus
STRGALPAS Streptococcus gallolyticus pasteurianus
STRVG Streptococcus gordonii
RUMHAN*1 Streptococcus hansenii
STRHYOV Streptococcus hyovaginalis
STRINFA Streptococcus infantarius
STRLUTE*1 Streptococcus infantarius coli
STRINFINF Streptococcus infantarius infantarius
STRINF Streptococcus infantis
SVI Streptococcus intermedius
STRALAC*1 Streptococcus intestinalis
STRLUTE Streptococcus lutetiensis
STRMACA Streptococcus macacae
STRANG*2 Streptococcus milleri group
STRVM Streptococcus mitis
STRMIT Streptococcus mitis group
GEMMO*1 Streptococcus morbillorum
STRVT Streptococcus mutans
STRMUG Streptococcus mutans group
STROLIG Streptococcus oligofermentans
STROR Streptococcus oralis
STRPA Streptococcus parasanguinis
ATOPAR*2 Streptococcus parvulus
STRGALPAS*1 Streptococcus pasteurianus
STRPER Streptococcus peroris
BLAUPROD*3 Streptococcus productus
STRPSEU Streptococcus pseudopneumoniae
STRRT Streptococcus ratti
ENTESACC*1 Streptococcus saccharolyticus
STRVS Streptococcus salivarius
STRSAG Streptococcus salivarius group
STRSLV Streptococcus salivarius salivarius
STRSAL Streptococcus salivarius thermophilus
SVS Streptococcus sanguinis
STRSG Streptococcus sanguinis group
STRSINE Streptococcus sinensis
STRSO Streptococcus sobrinus
STRSAL*1 Streptococcus thermophilus
STRTIGU Streptococcus tigurinus
STRVE Streptococcus vestibularis
GFS Streptococcus, group F
TANNSP Tannerella
TANNFORS Tannerella forsythia
TATSP Tatumella
TATPT Tatumella ptyseos
TETRSP Tetragenococcus
TETRHALO Tetragenococcus halophilus
TETRSOLI Tetragenococcus solitarius
TISSP Tissierella
TISPR Tissierella praeacuta
CANLIP*3 Torula lipolytica
CANUTI*2 Torula utilis
CANPARA*2 Torulopsis aggregata
CANHAE*1 Torulopsis haemulonii
CANINC*1 Torulopsis inconspicua
CANPIN*1 Torulopsis pintolopesii
CANUTI*3 Torulopsis utilis
CANUTI*4 Torulopsis utilis var utilis
TRASP Trabulsiella
TRAGU Trabulsiella guamensis
GEOTRKLEB*2 Trichosporon penicillatum
ENTSP*2 Vancomycin resistant Enterococcus
ENTFS*2 Vancomycin resistant Enterococcus faecalis
ENTFM*2 Vancomycin resistant Enterococcus faecium
VEISP Veillonella
VEIPA*2 Veillonella alcalescens
VEIATYP Veillonella atypica
VEICAVI Veillonella caviae
VEICRIC Veillonella criceti
VEIDISP Veillonella dispar
VEIMONT Veillonella montpellierensis
VEIPA Veillonella parvula
VEIRATT Veillonella ratti
VEIRODE Veillonella rodentium
SVU Viridans group streptococci
WEISSP Weissella
WEISCONF Weissella confusa
YOKSP Yokenella
YOKRE Yokenella regensburgei
CLOOR*1 Zymobacterium oroticum
und when referencing the NHSN Organism List. DO NOT interpret the absence of an organism to mean the
he NHSN Organism List, please contact us at nhsn@cdc.gov for guidance on appropriate reporting.

SNOMED Preferred Term SNOMED Code

Abiotrophia 115161005
Granulicatella adiacens 113713009
Granulicatella adiacens 113713009
Abiotrophia defectiva 113714003
Granulicatella elegans 115944008
Alistipes 427315001
Alistipes putredinis 426435007
Genus Alloscardovia 429601004
Alloscardovia omnicolens 429317001
Alpha-hemolytic Streptococcus species not Streptococcus pneumoniae 713921004
Anaerobic Gram-negative bacillus 243386003
Anaerobiospirillum 55757006
Anaerobiospirillum succinoproducens 46934005
Anaerobiospirillum thomasii 426729008
Anaerococcus 413518000
Anaerococcus hydrogenalis 413519008
Anaerococcus lactolyticus 413520002
Anaerococcus octavius 413521003
Anaerococcus prevotii 413522005
Anaerococcus tetradius 427220003
Anaerococcus vaginalis 413525007
Anaerorhabdus 54522000
Anaerorhabdus furcosus 24716009
Arcobacter 114206000
Arcobacter butzleri 114207009
Arcobacter nitrofigilis 408629003
Atopobium 115136007
Atopobium fossor 428580003
Atopobium minutum 113630002
Atopobium parvulum 113631003
Atopobium rimae 113632005
Atopobium vaginae 417246003
Genus Averyella 421099007
Candida lipolytica 63775007
Bacteroides 57522007
Prevotella bivia 114131009
Prevotella buccae 114134001
Prevotella buccalis 114135000
Bacteroides caccae 14342006
Pseudoflavonifractor capillosus 447428000
Prevotella buccae 114134001
Clostridium clostridioforme 53220001
Bacteroides coagulans 86193002
Prevotella corporis 114136004
Prevotella denticola 114138003
Prevotella disiens 114139006
Parabacteroides distasonis 447512008
Bacteroides eggerthii 90072006
Porphyromonas endodontalis 2401005
Bacteroides fragilis 55247009
Bacteroides fragilis group 417375007
Anaerorhabdus furcosus 24716009
Porphyromonas gingivalis 114163003
Parabacteroides goldsteinii 5691000146107
Prevotella heparinolytica 114141007
Megamonas hypermegale 9199006
Prevotella intermedia 114142000
Porphyromonas levii 114165005
Porphyromonas macacae 114166006
Bacteroides massiliensis 708567004
Prevotella melaninogenica 114144004
Parabacteroides merdae 447513003
Mitsuokella multacida 55553008
Dichelobacter nodosus 114168007
Bacteroides nordii 10091000087105
Capnocytophaga ochracea 4256006
Prevotella oralis 114146002
Prevotella oris 114147006
Prevotella oulorum 419466004
Bacteroides ovatus 86936008
Prevotella buccae 114134001
Tissierella praeacuta 75376009
Alistipes putredinis 426435007
Bacteroides pyogenes 50504006
Prevotella ruminicola 115949003
Porphyromonas macacae 114166006
Odoribacter splanchnicus 446487001
Bacteroides stercoris 163009
Bacteroides pyogenes 50504006
Bacteroides pyogenes 50504006
Bacteroides thetaiotaomicron 34236001
Bacteroides uniformis 59604009
Prevotella veroralis 114152001
Bacteroides vulgatus 52798008
Bacteroides zoogleoformans 425729002
Bifidobacterium 5912005
Bifidobacterium adolescentis 34446001
Bifidobacterium angulatum 33811005
Bifidobacterium dentium 36623007
Bifidobacterium bifidum 27108000
Bifidobacterium breve 35011006
Bifidobacterium catenulatum 11539003
Bifidobacterium dentium 36623007
Bifidobacterium dentium 36623007
Bifidobacterium gallicum 51095003
Bifidobacterium infantis 35848003
Bifidobacterium longum 19464000
Bifidobacterium pseudocatenulatum 19333001
Bifidobacterium scardovii 385502004
Bifidobacterium longum 19464000
Bilophila 114242008
Bilophila wadsworthia 114243003
Blautia 448390002
Blautia coccoides 449531007
Blautia hansenii 449574005
Blautia producta 698205008
Buttiauxella 3451006
Buttiauxella agrestis 10969007
Buttiauxella brennerae 416844002
Buttiauxella ferragutiae 417520001
Buttiauxella gaviniae 416852004
Buttiauxella izardii 417035007
Buttiauxella noackiae 114261007
Buttiauxella warmboldiae 416444007
Eubacterium limosum 87632000
Klebsiella granulomatis 417443008
Arcobacter butzleri 114207009
Helicobacter cinaedi 29258005
Helicobacter fennelliae 58177005
Helicobacter mustelae 10402009
Arcobacter nitrofigilis 408629003
Helicobacter pylori 80774000
Candida 3265006
Candida albicans 53326005
Candida stellatoidea 20849004
Candida auris 3491000146109
Candida bracarensis 3521000146107
Candida catenulata 283868009
Candida catenulata 283868009
Candida ciferrii 283867004
Candida dubliniensis 115952006
Candida duobushaemulonii 4001000146106
Candida glabrata 444877006
Candida guilliermondii 16557001
Candida guilliermondii var membranaefaciens 283874009
Candida haemulonii 243452008
Candida inconspicua 283871001
Candida intermedia 243455005
Candida kefyr 446237006
Candida krusei 76995003
Candida lambica 116458007
Candida lipolytica 63775007
Candida lusitaniae 47608006
Candida metapsilosis 712760003
Candida nivariensis 3681000146109
Candida norvegensis 243458007
Candida lusitaniae 47608006
Candida orthopsilosis 3691000146106
Candida parapsilosis 61302002
Candida parapsilosis complex 717979000
Candida lusitaniae 47608006
Candida pararugosa 702328004
Candida pelliculosa 115953001
Candida pintolopesii 283870000
Candida pulcherrima 243459004
Candida catenulata 283868009
Candida rugosa 23773004
Candida sake 446283000
Candida pintolopesii 283870000
Candida stellatoidea 20849004
Candida stellimalicola 735367000
Candida tropicalis 47885008
Candida utilis 243464000
Candida vini 45362004
Candida viswanathii 243465004
Candida zeylanoides 243466003
Capnocytophaga 22294008
Capnocytophaga canimorsus 113529004
Capnocytophaga cynodegmi 113530009
Capnocytophaga gingivalis 66463009
Capnocytophaga granulosa 113531008
Capnocytophaga haemolytica 113532001
Capnocytophaga ochracea 4256006
Capnocytophaga sputigena 89892005
carbapenem resistant Enterobacter cloacae 714007005
carbapenem resistant Klebsiella pneumoniae 446870005
Cedecea 69937007
Cedecea davisae 30854004
Cedecea lapagei 2345009
Cedecea neteri 83767006
Citrobacter 75972000
Citrobacter amalonaticus 55744003
Citrobacter braakii 114262000
Citrobacter koseri 114264004
Citrobacter farmeri 114263005
Citrobacter freundii 6265002
Citrobacter gillenii 416990006
Citrobacter koseri 114264004
Citrobacter murliniae 417581000
Citrobacter rodentium 114444007
Citrobacter sedlakii 114265003
Citrobacter werkmanii 114442006
Citrobacter youngae 114443001
Genus Clostridioides 772036006
Clostridium 8191000
Clostridium sardiniense 84958008
Clostridium argentiense 113565009
Clostridium baratii 31169007
Clostridium baratii 31169007
Eubacterium barkeri 113728009
Clostridium bartlettii 432470002
Clostridium beijerinckii 9766004
Clostridium bifermentans 8208007
Clostridium bolteae 413879005
Clostridium botulinum 13080008
Clostridium butyricum 19084008
Clostridium cadaveris 16616000
Clostridium carnis 7889007
Clostridium celerecrescens 113566005
Clostridium clostridioforme 53220001
Clostridium cochlearium 76955000
Clostridium cocleatum 24656001
Clostridium disporicum 57230009
Clostridium fallax 14264000
Clostridium ghonii 10467001
Clostridium ghonii 10467001
Clostridium glycolicum 112279007
Clostridium haemolyticum 45724004
Clostridium hastiforme 19185007
Clostridium hathewayi 416526002
Clostridium histolyticum 87443003
Clostridium indolis 50884003
Clostridium innocuum 19415008
Clostridium intestinale 113580003
Clostridium irregulare 40423006
Clostridium irregulare 40423006
Clostridium cochlearium 76955000
Clostridium leptum 37059005
Clostridium limosum 48305001
Clostridium malenominatum 12948002
Clostridium novyi 45891006
Flavonifractor plautii 447490001
Clostridium oroticum 29280008
Clostridium baratii 31169007
Clostridium paraputrificum 41966004
Clostridium baratii 31169007
Clostridium perfringens 8331005
Clostridium fallax 14264000
Clostridium butyricum 19084008
Clostridium putrefaciens 22321006
Clostridium ramosum 42706008
Clostridium sardiniense 84958008
Clostridium septicum 33101000
Clostridium sordellii 89313005
Clostridium sphenoides 65891000
Clostridium spiroforme 42936009
Clostridium sporogenes 41468005
Clostridium sporosphaeroides 89918009
Clostridium subterminale 58838009
Clostridium symbiosum 48321006
Clostridium tertium 81909005
Clostridium tetani 30917009
Filifactor villosus 114216008
Clostridium species, not Clostridium perfringens 413881007
Coliform bacteria 77309002
Collinsella 417046005
Collinsella aerofaciens 417399007
Collinsella intestinalis 432267004
Collinsella stercoris 432759008
Cronobacter 444664004
Cronobacter dublinensis 445559002
Cronobacter malonaticus 445560007
Cronobacter muytjensii 445561006
Cronobacter sakazakii 445562004
Cronobacter turicensis 445639005
Candida pararugosa 702328004
Candida utilis 243464000
Dialister 114169004
Dialister micraerophilus 446809007
Dialister pneumosintes 114170003
Dichelobacter 114167002
Dichelobacter nodosus 114168007
Edwardsiella 14566004
Edwardsiella tarda 74672006
Edwardsiella hoshinae 4280005
Edwardsiella ictaluri 68227003
Edwardsiella tarda 74672006
Eggerthella 414075007
Eggerthella lenta 414077004
Eggerthella sinesis 414078009
Eggerthia 7991000146108
Eggerthia catenaformis 59836004
Enterobacter 58683007
Klebsiella aerogenes 62592009
Pantoea agglomerans 115015008
Pantoea agglomerans 115015008
Enterobacter amnigenus 84221003
Enterobacter asburiae 33115003
Enterobacter cancerogenus 114451003
Enterobacter cloacae 14385002
Enterobacter cloacae complex 414102007
Enterobacter cloacae subspecies dissolvens 56813009
Kosakonia cowanii 416229008
Enterobacter cloacae subspecies dissolvens 56813009
Pluralibacter gergoviae 716346000
Hafnia alvei 76694001
Enterobacter hormaechei 114454006
Kluyvera intermedia 431977008
Enterobacter kobei 114456008
Serratia liquefaciens 23787004
Enterobacter ludwigii 432763001
Lelliottia nimipressuralis 29511003
Pluralibacter pyrinus 114455007
Enterobacteriaceae 106544002
Genus Enterococcus 2785000
Enterococcus asini 425342004
Enterococcus avium 87875008
Enterococcus canis 424191009
Enterococcus casseliflavus 30949009
Enterococcus cecorum 113722005
Enterococcus dispar 113724006
Enterococcus durans 46464008
Enterococcus faecalis 78065002
Enterococcus faecium 90272000
Enterococcus casseliflavus 30949009
Enterococcus gallinarum 53233007
Enterococcus gilvus 416934000
Enterococcus haemoperoxidus 423614008
Enterococcus hermanniensis 422482003
Enterococcus hirae 73852008
Enterococcus italicus 422707007
Enterococcus malodoratus 10262005
Enterococcus moraviensis 424862009
Enterococcus mundtii 38004008
Enterococcus pallens 417099004
Enterococcus phoeniculicola 432791009
Enterococcus pseudoavium 103436009
Enterococcus raffinosus 103437000
Enterococcus ratti 431989005
Enterococcus saccharolyticus 103438005
Enterococcus italicus 422707007
Tetragenococcus solitarius 431990001
Enterococcus sulfureus 113726008
Enterococcus villorum 424710004
Pantoea ananatis 115014007
Enterobacter cancerogenus 114451003
Enterobacter cloacae subspecies dissolvens 56813009
Pantoea agglomerans 115015008
Lelliottia nimipressuralis 29511003
Pantoea ananatis 115014007
Escherichia 64735005
Leclercia adecarboxylata 57459006
Escherichia albertii 419388003
Escherichia coli 112283007
Escherichia fergusonii 72461005
Escherichia hermannii 85786000
Escherichia vulneris 53013003
Eubacterium 5615005
Collinsella aerofaciens 417399007
Pseudoramibacter alactolyticus 113828002
Eubacterium barkeri 113728009
Eubacterium biforme 20347007
Eubacterium brachy 12734008
Eubacterium budayi 29984006
Eubacterium budayi 29984006
Eubacterium callanderi 113730006
Eubacterium combesii 13257008
Eubacterium contortum 59949005
Eubacterium cylindroides 20804002
Eubacterium dolichum 82964000
Eubacterium eligens 66412009
Slackia exigua 434236002
Atopobium fossor 428580003
Eubacterium hadrum 4696003
Eubacterium hallii 58040000
Eubacterium infirmum 113733008
Eggerthella lenta 414077004
Eubacterium limosum 87632000
Eubacterium minutum 113734002
Eubacterium moniliforme 46192006
Eubacterium nitrogenes 22777005
Eubacterium nodatum 48215005
Flavonifractor plautii 447490001
Eubacterium ramulus 8315002
Eubacterium rectale 69189003
Eubacterium saburreum 41543005
Eubacterium saphenum 113735001
Eubacterium siraeum 70459007
Eubacterium sulci 432171006
Eubacterium tenue 29575000
Mogibacterium timidum 417280000
Eubacterium ventriosum 20578007
Eubacterium yurii 4791002
Ewingella 3878001
Ewingella americana 19027003
ESBL Citrobacter freundii 721909006
ESBL Enterobacter cloacae 721910001
ESBL Escherichia coli 409800005
Extended spectrum beta-lactamase producing Klebsiella oxytoca 713928005
ESBL Klebsiella pneumoniae 409801009
ESBL Proteus mirabilis 713929002
Faecalibacterium 432915005
Faecalibacterium prausnitzii 433993006
Genus Filifactor 115663007
Filifactor alocis 431367004
Filifactor villosus 114216008
Finegoldia 417248002
Finegoldia magna 417469002
Flavonifractor 447035004
Flavonifractor plautii 447490001
Fusobacterium 33562003
Filifactor alocis 431367004
Fusobacterium canifelinum 432342000
Fusobacterium equinum 432343005
Fusobacterium gonidiaformans 84644009
Fusobacterium mortiferum 112330001
Fusobacterium naviforme 33311002
Fusobacterium necrogenes 17304009
Fusobacterium necrophorum 27274008
Fusobacterium necrophorum ss fundiliforme 113757008
Fusobacterium necrophorum ss necrophorum 113758003
Fusobacterium nucleatum 32763000
Fusobacterium nucleatum ss fusiforme 113760001
Fusobacterium nucleatum ss nucleatum 113761002
Fusobacterium nucleatum ss polymorphum 113762009
Fusobacterium periodonticum 69601004
Flavonifractor plautii 447490001
Fusobacterium nucleatum ss polymorphum 113762009
Faecalibacterium prausnitzii 433993006
Fusobacterium russii 85226004
Eubacterium sulci 432171006
Fusobacterium ulcerans 113764005
Fusobacterium varium 1972005
Gemella 11590002
Gemella bergeriae 131310006
Gemella haemolysans 37511002
Gemella morbillorum 113765006
Gemella sanguinis 125038007
Geotrichum 34324005
Geotrichum candidum 41625002
Geotrichum klebahnii 446493009
Geotrichum klebahnii 446493009
Granulicatella 409814005
Granulicatella adiacens 113713009
Granulicatella elegans 115944008
Hafnia 20523001
Hafnia alvei 76694001
Pichia angusta 449402006
Pichia anomala 427041001
Helcococcus 127526006
Helcococcus kunzii 127527002
Helcococcus sueciensis 431369001
Helicobacter 19454009
Helicobacter acinonychis 60081005
Helicobacter acinonychis 60081005
Helicobacter aurati 431287000
Helicobacter bilis 113537007
Helicobacter bizzozeroni 113538002
Helicobacter canadensis 416087003
Helicobacter canis 113539005
Helicobacter cholecystus 113540007
Helicobacter cinaedi 29258005
Helicobacter felis 68625001
Helicobacter fennelliae 58177005
Helicobacter ganmani 431448002
Helicobacter hepaticus 113541006
Helicobacter mesocricetorum 431449005
Helicobacter muridarum 78504006
Helicobacter mustelae 10402009
Helicobacter pylori 80774000
Helicobacter pametensis 432972000
Helicobacter pullorum 113543009
Helicobacter pylori 80774000
Helicobacter rappini 49037001
Helicobacter rodentium 113544003
Helicobacter salomonis 113545002
Helicobacter trogontum 113546001
Helicobacter typhlonius 432973005
Klebsiella 75032006
Klebsiella aerogenes 62592009
Klebsiella granulomatis 417443008
Raoultella ornithinolytica 416832000
Klebsiella oxytoca 40886007
Klebsiella pneumoniae ss. ozaenae 65186004
Raoultella planticola 416264004
Klebsiella pneumoniae 56415008
Klebsiella pneumoniae ss. ozaenae 65186004
Klebsiella pneumoniae ss. pneumoniae 18400002
Klebsiella pneumoniae ss. rhinoscleromatis 17688001
Klebsiella pneumoniae ss. rhinoscleromatis 17688001
Klebsiella singaporensis 433047006
Raoultella terrigena 416096003
Raoultella planticola 416264004
Klebsiella variicola 431976004
Kluyvera 61161003
Kluyvera ascorbata 58493008
Kluyvera cryocrescens 32547006
Kluyvera georgiana 416156003
Kluyvera intermedia 431977008
Kluyveromyces 78377004
Kluyveromyces marxianus 243431000
Kluyveromyces lactis 243430004
Kluyveromyces marxianus 243431000
Kosakonia 8031000146105
Kosakonia cowanii 416229008
Yokenella regensburgei 89477001
Lactobacillus 43690008
Lactobacillus acidophilus 45707005
Lactobacillus amylovorus 9534006
Lactobacillus antri 431689008
Lactobacillus plantarum 14332009
Lactobacillus brevis 90396007
Lactobacillus buchneri 49217007
Lactobacillus casei 1017006
Eggerthia catenaformis 59836004
Lactobacillus fermentum 65506008
Weissella confusa 113639001
Lactobacillus crispatus 89237007
Lactobacillus delbrueckii 5197002
Lactobacillus fermentum 65506008
Lactobacillus gasseri 71158000
Lactobacillus gastricus 431787001
Lactobacillus iners 431967006
Lactobacillus jensenii 65904004
Lactobacillus johnsonii 113786006
Lactobacillus kalixensis 432574008
Atopobium minutum 113630002
Lactobacillus oris 87480009
Lactobacillus paracasei 113792000
Lactobacillus plantarum 14332009
Lactobacillus reuteri 86271002
Lactobacillus rhamnosus 113798001
Atopobium rimae 113632005
Lactobacillus sakei 39861009
Lactobacillus salivarius 37809002
Lactobacillus ultunensis 432284005
Lactobacillus vaginalis 113803005
Lactobacillus vitulinus 10276006
Leclercia 43590002
Leclercia adecarboxylata 57459006
Lelliottia 717652001
Enterobacter amnigenus 84221003
Lelliottia nimipressuralis 29511003
Leminorella 31556000
Leminorella grimontii 74357002
Leminorella richardii 45354007
Leptotrichia 52505003
Eubacterium saburreum 41543005
Leptotrichia buccalis 85744006
Leptotrichia goodfellowii 433192002
Leptotrichia trevisanii 431794003
Leptotrichia wadei 433194001
Leuconostoc 43639007
Leuconostoc citreum 113821008
Leuconostoc citreum 113821008
Leuconostoc lactis 70285009
Leuconostoc mesenteroides 71403009
Leuconostoc pseudomesenteroides 243235006
Citrobacter amalonaticus 55744003
Citrobacter koseri 114264004
Megamonas 44152007
Megamonas hypermegale 9199006
Megamonas hypermegale 9199006
Megasphaera 48889004
Megasphaera elsdenii 26044001
Mitsuokella 24231001
Prevotella dentalis 114137008
Mitsuokella multacida 55553008
Moellerella 71655003
Moellerella wisconsensis 37107002
Mogibacterium 416887004
Mogibacterium diversum 429898003
Mogibacterium neglectum 429899006
Mogibacterium timidum 417280000
Mogibacterium vescum 416225002
Morganella 50713005
Morganella morganii 243301005
Morganella morganii subsp sibonii 243303008
multidrug resistant Enterobacter asburiae 714316001
multidrug resistant Klebsiella pneumoniae 714315002
multidrug resistant Morganella morganii 707293009
multiple drug-resistant Enterobacter cloacae 714317005
multiple drug-resistant Proteus mirabilis 714314003
Candida lipolytica 63775007
Pichia 4163004
Nutritionally variant streptococci 698214003
Obesumbacterium 50732004
Obesumbacterium proteus 28501001
Odoribacter 418523002
Odoribacter splanchnicus 446487001
Pichia angusta 449402006
Geotrichum candidum 41625002
Pantoea 115013001
Pantoea agglomerans 115015008
Pantoea ananatis 115014007
Pantoea ananatis 115014007
Pantoea dispersa 115017000
Parabacteroides 447036003
Parabacteroides distasonis 447512008
Parabacteroides goldsteinii 5691000146107
Parabacteroides merdae 447513003
Peptoniphilus asaccharolyticus 433440001
Peptoniphilus 430742009
Peptoniphilus asaccharolyticus 433440001
Peptoniphilus harei 433373007
Peptoniphilus ivorii 433375000
Peptoniphilus lacrimalis 433376004
Peptostreptococcus 243417000
Peptostreptococcus anaerobius 19217002
Peptoniphilus asaccharolyticus 433440001
Megasphaera elsdenii 26044001
Anaerococcus hydrogenalis 413519008
Anaerococcus lactolyticus 413520002
Finegoldia magna 417469002
Parvimonas micra 434293007
Anaerococcus octavius 413521003
Atopobium parvulum 113631003
Anaerococcus prevotii 413522005
Blautia producta 698205008
Anaerococcus tretradius 413524006
Anaerococcus vaginalis 413525007
Pichia 4163004
Pichia angusta 449402006
Pichia anomala 427041001
Pichia farinosa 243433002
Pichia kudriavzevii 16452009
Pluralibacter 716344002
Pluralibacter gergoviae 716346000
Pluralibacter pyrinus 114455007
Porphyromonas 114154000
Porphyromonas asaccharolyticus 115950003
Porphyromonas cangingivalis 114156003
Porphyromonas canoris 114157007
Porphyromonas cansulci 114158002
Porphyromonas catoniae 114159005
Porphyromonas circumentaria 114160000
Porphyromonas crevioricanis 114161001
Porphyromonas endodontalis 2401005
Porphyromonas gingivalis 114163003
Porphyromonas gingivicanis 114164009
Porphyromonas gulae 433019007
Porphyromonas levii 114165005
Porphyromonas macacae 114166006
Porphyromonas macacae 114166006
Porphyromonas somerae 450442004
Prevotella 114129000
Prevotella bivia 114131009
Prevotella buccae 114134001
Prevotella buccalis 114135000
Prevotella corporis 114136004
Prevotella dentalis 114137008
Prevotella denticola 114138003
Prevotella disiens 114139006
Prevotella enoeca 114140008
Prevotella heparinolytica 114141007
Prevotella intermedia 114142000
Prevotella loescheii 114143005
Prevotella marshii 417919003
Prevotella melaninogenica 114144004
Prevotella multiformis 418615005
Prevotella multisaccharivorax 418858007
Prevotella nigrescens 114145003
Prevotella oralis 114146002
Prevotella oralis group 440091000124102
Prevotella oris 114147006
Prevotella oulorum 419466004
Prevotella oulorum 419466004
Prevotella pallens 114149009
Prevotella ruminicola 115949003
Prevotella salivae 418278009
Prevotella shahii 419720005
Prevotella tannerae 114151008
Prevotella veroralis 114152001
Bacteroides zoogleoformans 425729002
Proteus 50517009
Proteus hauseri 417592004
Providencia alcalifaciens 46349009
Proteus mirabilis 73457008
Proteus myxofaciens 86145008
Proteus penneri 45298005
Providencia rettgeri 14196002
Proteus vulgaris 45834001
Providencia 112284001
Providencia alcalifaciens 46349009
Providencia rustigianii 19196004
Providencia heimbachae 47300009
Providencia rettgeri 14196002
Providencia rustigianii 19196004
Providencia stuartii 1445008
Pseudoflavonifractor 447037007
Pseudoflavonifractor capillosus 447428000
Pseudoramibacter 115131002
Pseudoramibacter alactolyticus 113828002
Rahnella 48569008
Rahnella aquatilis 10021006
Raoultella 417468005
Raoultella ornithinolytica 416832000
Raoultella planticola 416264004
Raoultella terrigena 416096003
Rothia 90163001
Rothia aeria 417029007
Rothia dentocariosa 35379007
Rothia mucilaginosa 416544005
Ruminococcus 28907009
Ruminococcus gnavus 88513000
Blautia hansenii 449574005
Blautia producta 698205008
Saccharomyces 27069008
Saccharomyces cerevisiae 58296003
Sarcina 58039002
Sarcina ventriculi 22267009
Serratia 42025004
Serratia entomophila 76656001
Serratia ficaria 802004
Serratia fonticola 112329006
Serratia grimesii 115005002
Serratia liquefaciens 23787004
Serratia marcescens 33522002
Serratia rubidaea 55825002
Serratia odorifera 10413007
Serratia plymuthica 28955009
Serratia proteamaculans 116135003
Serratia quinivorans 438199009
Serratia rubidaea 55825002
Serratia ureilytica 450416004
Slackia 432913003
Slackia exigua 434236002
Slackia heliotrinireducens 437984006
Small-colony-forming beta-hemolytic group A streptococci 415534000
Small-colony-forming beta-hemolytic group C streptococci 415535004
Small-colony-forming beta-hemolytic group G streptococci 415536003
Veillonella parvula 90435009
Rothia mucilaginosa 416544005
Granulicatella adiacens 113713009
Streptococcus alactolyticus 34228005
Streptococcus anginosus group 415597009
Streptococcus anginosus 44304009
Streptococcus anginosus group 415597009
Streptococcus anginosus-constellatus 70160008
Streptococcus australis 415598004
Enterococcus avium 87875008
Streptococcus bovis group 415599007
Streptococcus gallolyticus 113985000
Enterococcus casseliflavus 30949009
Enterococcus cecorum 113722005
Streptococcus constellatus 76199005
Streptococcus constellatus subspecies constellatus 415601009
Streptococcus constellatus subspecies pharyngis 415602002
Streptococcus criceti 34838009
Streptococcus cristatus 113980005
Abiotrophia defectiva 113714003
Streptococcus dentisani 708952006
Streptococcus dolonei 12704003
Enterococcus durans 46464008
Granulicatella elegans 115944008
Streptococcus equinus 72646003
Enterococcus faecalis 78065002
Enterococcus faecium 90272000
Streptococcus ferus 10049004
Enterococcus gallinarum 53233007
Streptococcus gallolyticus 113985000
Streptococcus gallolyticus subspecies gallolyticus 421544007
Streptococcus gallolyticus subspecies macedonicus 421004005
Streptococcus gallolyticus subspecies pasteurianus 421253004
Streptococcus gordonii 113986004
Blautia hansenii 449574005
Streptococcus hyovaginalis 113988003
Streptococcus infantarius 415603007
Streptococcus lutetiensis 415605000
Streptococcus infantarius subspecies infantarius 432506009
Streptococcus infantis 415604001
Streptococcus intermedius 62170002
Streptococcus alactolyticus 34228005
Streptococcus lutetiensis 415605000
Streptococcus macacae 59717000
Streptococcus anginosus group 415597009
Streptococcus mitis 57997003
Streptococcus mitis group 127539005
Gemella morbillorum 113765006
Streptococcus mutans 214001
Streptococcus mutans group 127536003
Streptococcus oligofermentans 440296007
Streptococcus oralis 19870004
Streptococcus parasanguinis 113990002
Atopobium parvulum 113631003
Streptococcus gallolyticus subspecies pasteurianus 421253004
Streptococcus peroris 416347004
Blautia producta 698205008
Streptococcus pseudopneumoniae 420470004
Streptococcus ratti 10667007
Enterococcus saccharolyticus 103438005
Streptococcus salivarius 39888004
Streptococcus salivarius group 127537007
Streptococcus salivarius subsp. salivarius 84684000
Streptococcus salivarius subsp. thermophilus 23310006
Streptococcus sanguinis 113993000
Streptococcus sanguinis group 115658008
Streptococcus sinensis 438909001
Streptococcus sobrinus 43777007
Streptococcus salivarius subsp. thermophilus 23310006
Streptococcus tigurinus 699479005
Streptococcus vestibularis 113998009
Streptococcus, group F 83503005
Tannerella 419107003
Tannerella forsythia 420048009
Tatumella 12162005
Tatumella ptyseos 1546007
Tetragenococcus 417005000
Tetragenococcus halophilus 438324001
Tetragenococcus solitarius 431990001
Tissierella 37421007
Tissierella praeacuta 75376009
Candida lipolytica 63775007
Candida utilis 243464000
Candida pararugosa 702328004
Candida haemulonii 243452008
Candida inconspicua 283871001
Candida pintolopesii 283870000
Candida utilis 243464000
Candida utilis 243464000
Trabulsiella 243308004
Trabulsiella guamensis 243309007
Geotrichum klebahnii 446493009
Vancomycin resistant Enterococcus 113727004
Vancomycin resistant Enterococcus faecalis 712663006
Vancomycin resistant Enterococcus faecium 712665004
Veillonella 29875005
Veillonella parvula 90435009
Veillonella atypica 21633009
Veillonella caviae 63486005
Veillonella criceti 77243008
Veillonella dispar 29564004
Veillonella montpellierensis 438330001
Veillonella parvula 90435009
Veillonella ratti 4427009
Veillonella rodentium 78654008
Streptococcus, viridans group 31703004
Weissella 118293006
Weissella confusa 113639001
Yokenella 14943005
Yokenella regensburgei 89477001
Clostridium oroticum 29280008
It is possible that your laboratory may identify an organism that cannot be found when referencing the NHSN Orga
not reportable. If you have an organism which is not found on the NHSN Organism List, please conta

NHSN Code NHSN Display Name

ABISP Abiotrophia
GRADJ*2 Abiotrophia adiacens
GRADJ*3 Abiotrophia adjacens
STRDF Abiotrophia defectiva
GRANELEG*1 Abiotrophia elegans
ACHOSP Acholeplasma
ACHOLAID Acholeplasma laidlawii
ACHOOCUL Acholeplasma oculi
ACHSP Achromobacter
ACHDENI Achromobacter denitrificans
ACHPIEC Achromobacter piechaudii
ACHRUHL Achromobacter ruhlandii
ALCXYL Achromobacter xylosoxidans
ACHXYL Achromobacter xylosoxidans xylosoxidans
ACISP Acidaminococcus
ACIFE Acidaminococcus fermentans
AFB Acid-fast bacillus
ACIDSP Acidovorax
ACDEL Acidovorax delafieldii
ACIDFACI Acidovorax facilis
ACIDTEMP Acidovorax temperans
ACS Acinetobacter
ACBA Acinetobacter baumannii
ACICBA Acinetobacter calcoaceticus
ACCA Acinetobacter calcoaceticus-baumannii complex
ACHA Acinetobacter haemolyticus
ACJH Acinetobacter johnsonii
ACJU Acinetobacter junii
ACLW Acinetobacter lwoffi
ACINNOSO Acinetobacter nosocomialis
ACINPITT Acinetobacter pittii
ACIRADI Acinetobacter radioresistens
ACISCHI Acinetobacter schindleri
ACIURSI Acinetobacter ursingii
ACBSP Actinobacillus
HAEACT*1 Actinobacillus actinomycetemcomitans
ACBEQ Actinobacillus equuli
ACBHOMI Actinobacillus hominis
ACBLI Actinobacillus lignieresii
ACBSU Actinobacillus suis
ACURE Actinobacillus ureae
ACTME*1 Actinobacterium meyeri
ACTISP Actinobaculum
ACTIMASS Actinobaculum massiliense
ACTISCHA*1 Actinobaculum schaalii
ACTIURIN*1 Actinobaculum urinale
ACTINSP Actinomadura
ACTINLATI Actinomadura latina
ACTINMADU Actinomadura madurae
ACTINPELL Actinomadura pelletieri
ACTSP Actinomyces
TRUEBERN*1 Actinomyces bernardiae
ACTBO Actinomyces bovis
ACTCARD Actinomyces cardiffensis
ACTDENT Actinomyces dentalis
ACTEURO Actinomyces europaeus
ACTFUNK Actinomyces funkei
ACTGE Actinomyces georgiae
ACTGR Actinomyces gerencseriae
ACTGRAE Actinomyces graevenitzii
ACTHONG Actinomyces hongkongensis
ACTIS Actinomyces israelii
ACTME Actinomyces meyeri
ACTNA Actinomyces naeslundii
ACTNASI Actinomyces nasicola
ACTNEUI Actinomyces neuii
ACTOD Actinomyces odontolyticus
ACTORIC Actinomyces oricola
ACTORIS Actinomyces oris
ARCPY*1 Actinomyces pyogenes
ACTRADI Actinomyces radicidentis
ACTRADIN Actinomyces radingae
ACTTURI Actinomyces turicensis
ACTUROG Actinomyces urogenitalis
ACTVI Actinomyces viscosus
ACTINOTISP Actinotignum
ACTISCHA Actinotignum schaalii
ACTIURIN Actinotignum urinale
AEROBE Aerobe
AEGU Aerococcus
AECH Aerococcus christensenii
AESGN Aerococcus sanguinicola
AEUR Aerococcus urinae
AEURQ Aerococcus urinaeequi
AEURH Aerococcus urinaehominis
AEVI Aerococcus viridans
AES Aeromonas
AERBEST Aeromonas bestiarum
AERPUN Aeromonas caviae
AERCAVI Aeromonas caviae complex
AERENCH Aeromonas encheleia
AERTR*1 Aeromonas enteropelogenes
AEREUCR Aeromonas eucrenophila
AH Aeromonas hydrophila
AERHYDR Aeromonas hydrophila complex
AERJA Aeromonas jandaei
AERME Aeromonas media
AERMOLL Aeromonas molluscorum
AERPOPO Aeromonas popoffii
AERPUN*1 Aeromonas punctata
AERSA Aeromonas salmonicida
AERSC Aeromonas schubertii
AERSIMI Aeromonas simiae
AERSOB Aeromonas sobria
AERTR Aeromonas trota
AEVER Aeromonas veronii
AFIPSP Afipia
AFIPCLEV Afipia clevelandensis
AFIPFELI Afipia felis
AGGRSP Aggregatibacter
HAEACT Aggregatibacter actinomycetemcomitans
HAEAP Aggregatibacter aphrophilus
AGGRSEGN Aggregatibacter segnis
AGSP Agrobacterium
RHIRAD*1 Agrobacterium radiobacter
AGROSP Agromyces
ALSP Alcaligenes
BORBR*1 Alcaligenes bronchisepticus
ALFE Alcaligenes faecalis
ALFE*1 Alcaligenes odorans
ACHPIEC*1 Alcaligenes piechaudii
ALCXYL*1 Alcaligenes xylosoxidans
ALXY Alcaligenes xylosoxidans xylosoxidans
ALISSP Alishewanella
ALISFETA Alishewanella fetalis
ALISTSP Alistipes
BACPU Alistipes putredinis
ALLOSP Alloiococcus
ALLOOTIT Alloiococcus otitis
ALLOSSP Alloscardovia
ALLOOMNI Alloscardovia omnicolens
AS Alpha-hemolytic streptococcus
ASNSP Alpha-hemolytic Streptococcus, not S pneumoniae
ALYSSP Alysiella
ALYSCRAS Alysiella crassa
AMYCSP Amycolatopsis
AMYCORIE Amycolatopsis orientalis
ANS Anaerobe
ANAGNR Anaerobic Gram-negative bacillus
ANAGNCB Anaerobic Gram-negative coccobacillus
ANAGNC Anaerobic Gram-negative coccus
ANAGPR Anaerobic Gram-positive bacillus
ANAGPCB Anaerobic Gram-positive coccobacillus
ANAGPC Anaerobic Gram-positive coccus
ANSP Anaerobiospirillum
ANSU Anaerobiospirillum succiniciproducens
ANTHOM Anaerobiospirillum thomasii
ANASP Anaerococcus
PPSHY Anaerococcus hydrogenalis
ANALAC Anaerococcus lactolyticus
ANAOCTA Anaerococcus octavius
ANAPRE Anaerococcus prevotii
ANATETR Anaerococcus tetradius
ANAVAG Anaerococcus vaginalis
ANRSP Anaerorhabdus
ANRFU Anaerorhabdus furcosus
ANAPSP Anaplasma
ANEUSP Aneurinibacillus
ANEUANEU Aneurinibacillus aneurinilyticus
AQUABSP Aquabacterium
AQUABPARV Aquabacterium parvum
PRPRO*2 Arachnia propionica
ARCSP Arcanobacterium
TRUEBERN*2 Arcanobacterium bernardiae
ARCHA Arcanobacterium haemolyticum
ARCPLUR Arcanobacterium pluranimalium
ARCPY*3 Arcanobacterium pyogenes
ACOSP Arcobacter
ACOBUTZ Arcobacter butzleri
ACONI Arcobacter nitrofigilis
ARSENISP Arsenicicoccus
ARSENIBOLI Arsenicicoccus bolidensis
ARTSP Arthrobacter
ARTAGIL Arthrobacter agilis
ARTALBU Arthrobacter albus
ARTARIL Arthrobacter arilaitensis
ARTASTR Arthrobacter astrocyaneus
ARTAURE Arthrobacter aurescens
ARTBERG Arthrobacter bergerei
ARTCHLO Arthrobacter chlorophenolicus
ARTCITR Arthrobacter citreus
ARTCREA Arthrobacter creatinolyticus
ARTCRYS Arthrobacter crystallopoietes
ARTCUMM Arthrobacter cumminsii
ARTFLAV Arthrobacter flavus
ARTGAND Arthrobacter gandavensis
ARTGANG Arthrobacter gangotriensis
ARTGLOB Arthrobacter globiformis
ARTHIST Arthrobacter histidinolovorans
ARTILIC Arthrobacter ilicis
ARTKERG Arthrobacter kerguelensis
ARTKORE Arthrobacter koreensis
ARTLUTE Arthrobacter luteolus
ARTMETH Arthrobacter methylotrophus
ARTMYSO Arthrobacter mysorens
ARTNASI Arthrobacter nasiphocae
ARTNICO Arthrobacter nicotianae
ARTNICOT Arthrobacter nicotinovorans
ARTNITR Arthrobacter nitroguajacolicus
ARTORYZ Arthrobacter oryzae
ARTOXYD Arthrobacter oxydans
ARTPASC Arthrobacter pascens
ARTPOLY Arthrobacter polychromogenes
ARTPROT Arthrobacter protophormiae
ARTPSYC Arthrobacter psychrolactophilus
ARTPSYCH Arthrobacter psychrophenolicus
ARTRAMO Arthrobacter ramosus
ARTRHOM Arthrobacter rhombi
ARTROSE Arthrobacter roseus
ARTRUSS Arthrobacter russicus
ARTSCLE Arthrobacter scleromae
PP*2 Arthrobacter siderocapsulatus
ARTSULF Arthrobacter sulfonivorans
ARTSULFU Arthrobacter sulfureus
ARTURAT Arthrobacter uratoxydans
ARTUREA Arthrobacter ureafaciens
CORVAR*2 Arthrobacter variabilis
ARTVISC Arthrobacter viscosus
ARTWOLU Arthrobacter woluwensis
ATOSP Atopobium
ATOFOSS Atopobium fossor
ATOMIN Atopobium minutum
ATOPAR Atopobium parvulum
ATORIM Atopobium rimae
ATOVAGI Atopobium vaginae
AUREIALTA*1 Aurantimonas altamirensis
AUREISP Aureimonas
AUREIALTA Aureimonas altamirensis
MICRLIQU*1 Aureobacterium liquefaciens
AVERSP Averyella
AZORHSP Azorhizobium
AZORHCAUL Azorhizobium caulinodans
AZOSSP Azospirillum
AZOSBRAS Azospirillum brasilense
BAC Bacillus
BAEOL Bacillus aeolius
BAERI Bacillus aerius
BAGAR Bacillus agaradhaerens
BREVIAGRI*1 Bacillus agri
BALCA Bacillus alcalophilus
BALGI Bacillus algicola
PAEALV*1 Bacillus alvei
BAMYL Bacillus amyloliquefaciens
ANEUANEU*1 Bacillus aneurinolyticus
BA Bacillus anthracis
BAQUI Bacillus aquimaris
BARSE Bacillus arseniciselenatis
BASAH Bacillus asahii
BATRO Bacillus atrophaeus
BAZOT Bacillus azotoformans
BBADI Bacillus badius
BBARB Bacillus barbaricus
BBATA Bacillus bataviensis
BBENZ Bacillus benzoevorans
BBORO Bacillus boroniphilus
BREBRE*1 Bacillus brevis
BBUTA Bacillus butanolivorans
BCARB Bacillus carboniphilus
BREVICENT*1 Bacillus centrosporus
BC Bacillus cereus
BCERG Bacillus cereus group
BCHIT Bacillus chittonlyticus
BACCIR Bacillus circulans
BACCIRG Bacillus circulans group
BCLARK Bacillus clarkii
BCLAUS Bacillus clausii
BACCOA Bacillus coagulans
BCOHN Bacillus cohnii
BDECI Bacillus decisifrondis
BDECO Bacillus decolorationis
BDIPS Bacillus dipsosauri
BDREN Bacillus drentensis
BEDAP*1 Bacillus edaphicus
BEHIM Bacillus ehimensis
BENDO Bacillus endophyticus
BFARR Bacillus farraginis
BFAST Bacillus fastidiosus
BACFIR Bacillus firmus
BFLEX Bacillus flexus
BFORD Bacillus fordii
BFORT Bacillus fortis
BFUMA Bacillus fumarioli
BFUNI Bacillus funiculus
BREVIAGRI*2 Bacillus galactophilus
BGALA Bacillus galactosidilyticus
BGELA Bacillus gelatini
BGIBS Bacillus gibsonii
BGINS Bacillus ginsengi
BGORN Bacillus gornadae
BHALM Bacillus halmapalus
BHALDF Bacillus halodenitrificans
BHALDR Bacillus halodurans
BHORI Bacillus horikoshii
BHORT Bacillus horti
BHUMI Bacillus humi
BHWAJ Bacillus hwajinpoensis
BIDRI Bacillus idriensis
BINDI Bacillus indicus
BINFA Bacillus infantis
BINFE Bacillus infernus
BJEOT Bacillus jeotgali
BKAUS Bacillus kaustophilus
BKORL Bacillus korlensis
BKRUL Bacillus krulwichiae
BLAEV*1 Bacillus laevolacticus
PAELARV*1 Bacillus larvae
BRELAT*1 Bacillus laterosporus
PAELENT*1 Bacillus lentimorbus
BACLEN Bacillus lentus
BACLIC Bacillus licheniformis
BLUCI Bacillus luciferensis
PAEMAC*2 Bacillus macerans
BMACR Bacillus macroides
BMACY Bacillus macyae
BMARN Bacillus marinus
BMARS Bacillus marisflavi
BMASS Bacillus massiliensis
BACMEG Bacillus megaterium
BMETH Bacillus methanolicus
BMOJA Bacillus mojavensis
BMUCI Bacillus mucilaginosus
BMURA Bacillus muralis
BMYCO Bacillus mycoides
BNAGA Bacillus naganoensis
BNEAL Bacillus nealsonii
BNIAC Bacillus niacini
BNOVA Bacillus novalis
BODYS Bacillus odysseyi
BOKUH Bacillus okuhidensis
BOLER Bacillus oleronius
PAEPABU*1 Bacillus pabuli
BPALL Bacillus pallidus
VIRPAN*1 Bacillus pantothenticus
BREVIPARA*1 Bacillus parabrevis
BPAST Bacillus pasteurii
BPATA Bacillus patagoniensis
BPOCH Bacillus pocheonensis
PAEPOL*2 Bacillus polymyxa
PAEPOPI*1 Bacillus popilliae
BPSDL Bacillus pseudalcaliphilus
BPSDF Bacillus pseudofirmus
BPSMY Bacillus pseudomycoides
BPSYP Bacillus psychrophilus
BPSYS Bacillus psychrosaccharolyticus
BPULV Bacillus pulvifaciens
BACPUM Bacillus pumilus
RUMMPYCN*1 Bacillus pycnus
BSALE Bacillus salexigens
BSALI Bacillus saliphilus
BSELE Bacillus selenitireducens
BSHAC Bacillus shackletonii
BSILV*1 Bacillus silvestris
BSIMP Bacillus simplex
BSIRA Bacillus siralis
BACSM Bacillus smithii
BSOLI Bacillus soli
BSONO Bacillus sonorensis
BSPOR Bacillus sporothermodurans
BSUBT Bacillus subterraneus
BSU Bacillus subtilis
BACSUG Bacillus subtilis group
BSIN Bacillus subtilis inaquosorum
BSSP Bacillus subtilis spizizenii
BSS Bacillus subtilis subtilis
BTEQU Bacillus tequilensis
BTHMN Bacillus thermantarcticus
BTHMM Bacillus thermoamylovorans
BTHMC Bacillus thermocatenulatus
BTHMCL Bacillus thermocloacae
GEOBTHER*1 Bacillus thermodenitrificans
BTHMG Bacillus thermoglucosidasius
PAETHIA*1 Bacillus thiaminolyticus
BACTHU Bacillus thuringiensis
BTUSC Bacillus tusciae
PAEVALI*2 Bacillus validus
BVALL Bacillus vallismortis
BVEDD Bacillus vedderi
BVELE Bacillus velezensis
BVIET Bacillus vietnamensis
CHRVI*1 Bacillus violaceus
BVIRE Bacillus vireti
BWEIH Bacillus weihenstephanensis
BACNANT Bacillus, not B. anthracis
CORMA*1 Bacterionema matruchotii
BAS Bacteroides
PREBI*1 Bacteroides bivius
PREBC*2 Bacteroides buccae
PREBU*1 Bacteroides buccalis
BACCC Bacteroides caccae
PSEFCAPI*1 Bacteroides capillosus
PREBC*3 Bacteroides capillus
CLOCL*1 Bacteroides clostridiiformis
BACCG Bacteroides coagulans
PRECO*1 Bacteroides corporis
PREDE*1 Bacteroides denticola
PREDI*1 Bacteroides disiens
BACDT*1 Bacteroides distasonis
BACEG Bacteroides eggerthii
POREN*1 Bacteroides endodontalis
BF Bacteroides fragilis
BFG Bacteroides fragilis group
ANRFU*1 Bacteroides furcosus
PORGI*1 Bacteroides gingivalis
PARAGOLD*1 Bacteroides goldsteinii
CAMGR*1 Bacteroides gracilis
PREHE*1 Bacteroides heparinolyticus
MEGAHYPE*2 Bacteroides hypermegas
PREIN*1 Bacteroides intermedius
PORLE*1 Bacteroides levii
PORSA*1 Bacteroides macacae
BACMASS Bacteroides massiliensis
PREM*1 Bacteroides melaninogenicus
BACMR*1 Bacteroides merdae
MITML*2 Bacteroides multiacidus
DICNO*1 Bacteroides nodosus
BACNORD Bacteroides nordii
CAPOC*1 Bacteroides ochraceus
PREOR*1 Bacteroides oralis
PREOS*1 Bacteroides oris
PREOU*1 Bacteroides oulorum
BACOV Bacteroides ovatus
PREBC*1 Bacteroides pentosaceus
TISPR*1 Bacteroides praeacutus
BACPU*1 Bacteroides putredinis
BACPYOG Bacteroides pyogenes
PRERU*1 Bacteroides ruminicola
PORSA*2 Bacteroides salivosus
BACSP*1 Bacteroides splanchnicus
BACST Bacteroides stercoris
BACPYOG*1 Bacteroides suis
BACPYOG*2 Bacteroides tectus
BACTH Bacteroides thetaiotaomicron
BACUN Bacteroides uniformis
CAMUREO*1 Bacteroides ureolyticus
PREVE*1 Bacteroides veroralis
BACVU Bacteroides vulgatus
PREZO Bacteroides zoogleoformans
BALNSP Balneatrix
BALNALPI Balneatrix alpica
BARSP Bartonella
BARBA Bartonella bacilliformis
BARCLAR Bartonella clarridgeiae
BARELIZ Bartonella elizabethae
BARHEN Bartonella henselae
BARQUI Bartonella quintana
BARVIN Bartonella vinsonii
VIBAL*2 Beneckea alginolytica
VIBHAR*1 Beneckea harveyi
VIBPA*2 Beneckea parahaemolytica
VIBVU*1 Beneckea vulnifica
BERSP Bergeyella
BERZOO Bergeyella zoohelcum
BS Beta-hemolytic streptococcus
STRABH Beta-hemolytic Streptococcus, group A
SNABBH Beta-hemolytic streptococcus, non-Group A, non-Group B
BIFSP Bifidobacterium
BIFADOL Bifidobacterium adolescentis
BIFANGU Bifidobacterium angulatum
BIFDE*1 Bifidobacterium appendicitis
BIFBI Bifidobacterium bifidum
BIFBR Bifidobacterium breve
BIFCATE Bifidobacterium catenulatum
BIFDE Bifidobacterium dentium
BIFDE*2 Bifidobacterium ericksonii
BIFGALL Bifidobacterium gallicum
BIFINF Bifidobacterium infantis
BIFLO Bifidobacterium longum
BIFPSEU Bifidobacterium pseudocatenulatum
BIFSCAR Bifidobacterium scardovii
BIFLO*1 Bifidobacterium suis
BILSP Bilophila
BILWA Bilophila wadsworthia
BLAUSP Blautia
BLAUCOCC Blautia coccoides
RUMHAN Blautia hansenii
BLAUPROD Blautia producta
BORSP Bordetella
BORAVI Bordetella avium
BORBR Bordetella bronchiseptica
BORHINZ Bordetella hinzii
BORHOLM Bordetella holmesii
BORPA Bordetella parapertussis
BORPE Bordetella pertussis
BORPETR Bordetella petrii
BORTREM Bordetella trematum
BOSP Borrelia
BOAFZE Borrelia afzelii
BOANSE Borrelia anserina
BOBU Borrelia burgdorferi
BOCAUC Borrelia caucasica
BOCORI Borrelia coriaceae
BOCROC Borrelia crocidurae
BODUTT*1 Borrelia duttoni
BODUTT Borrelia duttonii
BOGA Borrelia garinii
BOHE Borrelia hermsii
BOHISP Borrelia hispanica
BOJAPO Borrelia japonica
BOLUSI Borrelia lusitaniae
BOMAZZ Borrelia mazzottii
BOMIYA Borrelia miyamotoi
BORE*2 Borrelia novyi
BORE*1 Borrelia obermyeri
BOPA Borrelia parkeri
BORE Borrelia recurrentis
BOTANU Borrelia tanukii
BOTHEI Borrelia theileri
BOTU Borrelia turicatae
BOVALA Borrelia valaisiana
BOVENE Borrelia venezuelensis
BRACHSP Brachybacterium
BRACHMURI Brachybacterium muris
BRACSP Brachyspira
BRACAALB Brachyspira aalborgi
BRACPILO Brachyspira pilosicoli
MORCA*1 Branhamella catarrhalis
MORCUNI*2 Branhamella cuniculi
MOROVIS*1 Branhamella ovis
BREVISP Brevibacillus
BREVIAGRI Brevibacillus agri
BREBRE Brevibacillus brevis
BREVICENT Brevibacillus centrosporus
BRELAT Brevibacillus laterosporus
BREVIPARA Brevibacillus parabrevis
BRVSP Brevibacterium
CURTOALBI*1 Brevibacterium albidum
CORAMM*1 Brevibacterium ammoniagenes
BRVCAS Brevibacterium casei
BRVEPI Brevibacterium epidermidis
MICRIMPE*2 Brevibacterium imperiale
BRVLINE Brevibacterium linens
BRVLUTE Brevibacterium luteolum
BRVMCBR Brevibacterium mcbrellneri
MICROXYD*1 Brevibacterium oxydans
BRVBRAVE Brevibacterium ravenspurgense
BRVSANG Brevibacterium sanguinis
CORVIT*1 Brevibacterium vitarumen
BREVUSP Brevundimonas
BREDIM Brevundimonas diminuta
BREVES Brevundimonas vesicularis
BRSP Brucella
BRAB Brucella abortus
BRCA Brucella canis
BRME Brucella melitensis
BRNEOT Brucella neotomae
BROVIS Brucella ovis
BRSU Brucella suis
BUDSP Budvicia
BUDAQ Budvicia aquatica
BULLSP Bulleidia
BULLEXTR Bulleidia extructa
BURSP Burkholderia
BURAMBI Burkholderia ambifaria
BURANTH Burkholderia anthina
BURARBO Burkholderia arboris
BURCENO Burkholderia cenocepacia
BURCE Burkholderia cepacia
BURCEPCOM Burkholderia cepacia complex
BURGL*5 Burkholderia cocovenenans
BURCONT Burkholderia contaminans
BURDIFF Burkholderia diffusa
BURDOLO Burkholderia dolosa
BURFUNG*1 Burkholderia fungorum
BURGL Burkholderia gladioli
BURLATA Burkholderia lata
BURLATE Burkholderia latens
BURMA Burkholderia mallei
BURMETA Burkholderia metallica
BURMULT Burkholderia multivorans
RALPIC*1 Burkholderia pickettii
BURPM Burkholderia pseudomallei
BURPYRR Burkholderia pyrrocinia
BURSTAB Burkholderia stabilis
BURTHAI Burkholderia thailandensis
BURUBON Burkholderia ubonensis
BURVIET Burkholderia vietnamiensis
BUTSP Buttiauxella
BUTAG Buttiauxella agrestis
BUTBREN Buttiauxella brennerae
BUTFERR Buttiauxella ferragutiae
BUTGAVI Buttiauxella gaviniae
BUTIZAR Buttiauxella izardii
BUTNO Buttiauxella noackiae
BUTWARM Buttiauxella warmboldiae
EUBLI*1 Butyribacterium rettgeri
BUTYRSP Butyricimonas
BUTYRVIRO Butyricimonas virosa
BUTYSP Butyrivibrio
BUTYFIBR Butyrivibrio fibrisolvens
BUTYHUNG Butyrivibrio hungatei
CALSP Calymmatobacterium
KLEGRA*1 Calymmatobacterium granulomatis
CAMSP Campylobacter
ACOBUTZ*1 Campylobacter butzleri
HELCI*1 Campylobacter cinaedi
CAMCL Campylobacter coli
CAMCO Campylobacter concisus
CAMCU Campylobacter curvus
HELFE*1 Campylobacter fennelliae
CAMFU Campylobacter fetus
CAMFF Campylobacter fetus fetus
CAMJE*1 Campylobacter fetus jejuni
CAMFV Campylobacter fetus venerealis
CAMGR Campylobacter gracilis
CAMHELV Campylobacter helveticus
CAMHOMI Campylobacter hominis
CAMHY Campylobacter hyointestinalis
CAMINSU Campylobacter insulaenigrae
CAMJE Campylobacter jejuni
CAMJD Campylobacter jejuni doylei
CAMJJ Campylobacter jejuni jejuni
CAMLANI Campylobacter lanienae
CAMLA Campylobacter lari
CAMLA*1 Campylobacter laridis
CAMSM Campylobacter mucosalis
HELMU*2 Campylobacter mustelae
ACONI*1 Campylobacter nitrofigilis
HELPY*1 Campylobacter pylori
CAMRE Campylobacter rectus
CAMSHOW Campylobacter showae
CAMSPUT Campylobacter sputorum
CAMSB Campylobacter sputorum bubulus
CAMSM*1 Campylobacter sputorum mucosalis
CAMSS Campylobacter sputorum sputorum
CAMUPSA Campylobacter upsaliensis
CAMUREO Campylobacter ureolyticus
CAPSP Capnocytophaga
CAPCA Capnocytophaga canimorsus
CAPCYNO Capnocytophaga cynodegmi
CAPGI Capnocytophaga gingivalis
CAPGRAN Capnocytophaga granulosa
CAPHEMO Capnocytophaga haemolytica
CAPOC Capnocytophaga ochracea
CAPST Capnocytophaga sputigena
ACS*2 carbapenem resistant Acinetobacter
ENC*4 carbapenem resistant Enterobacter cloacae
KP*3 carbapenem resistant Klebsiella pneumoniae
CARSP Cardiobacterium
CARHO Cardiobacterium hominis
CARVALV Cardiobacterium valvarum
CATABSP Catabacter
CATABHONG Catabacter hongkongensis
CATESP Catenibacterium
CATEMITS Catenibacterium mitsuokai
CATOSP Catonella
CATOMORB Catonella morbi
CEDSP Cedecea
CEDDA Cedecea davisae
CEDLA Cedecea lapagei
CEDNE Cedecea neteri
CELLSP Cellulomonas
CELLUCELL*1 Cellulomonas cellulans
CELLHOMI Cellulomonas hominis
CELLHUMI Cellulomonas humilata
CELLUSP Cellulosimicrobium
CELLUCELL Cellulosimicrobium cellulans
CENSP Centipeda
CENPE Centipeda periodontii
CHLSP Chlamydia
CHLPN*1 Chlamydia pneumoniae
CHLPS*3 Chlamydia psittaci
CHLTR Chlamydia trachomatis
CHLASP Chlamydophila
CHLAABOR Chlamydophila abortus
CHLPN Chlamydophila pneumoniae
CHLPS Chlamydophila psittaci
CHRSP Chromobacterium
CHRVI*2 Chromobacterium janthinum
CHRVI Chromobacterium violaceum
CHRYS Chryseobacterium
CHRGLE Chryseobacterium gleum
CHRIND Chryseobacterium indologenes
CHSSP Chryseomonas
CHSLU Chryseomonas luteola
CHSLU*2 Chryseomonas polytricha
CS Citrobacter
CITAM Citrobacter amalonaticus
CITBRA Citrobacter braakii
CITKO*1 Citrobacter diversus
CITA1 Citrobacter farmeri
CF Citrobacter freundii
CITGILL Citrobacter gillenii
CITKO Citrobacter koseri
CITMURL Citrobacter murliniae
CITRODE Citrobacter rodentium
CITSED Citrobacter sedlakii
CITWER Citrobacter werkmanii
CITYOU Citrobacter youngae
CLOSTRSP Clostridioides
CD Clostridioides difficile
CLS Clostridium
CLOSAR*1 Clostridium absonum
CLOAR Clostridium argentinense
CLOBA*3 Clostridium barati
CLOBA Clostridium baratii
EUBBARK*1 Clostridium barkeri
CLOBART Clostridium bartlettii
CLOBEIJ Clostridium beijerinckii
CLOBI Clostridium bifermentans
CLOBOLT Clostridium bolteae
CLOBO Clostridium botulinum
CLOBU Clostridium butyricum
CLOCA Clostridium cadaveris
CLOCN Clostridium carnis
CLOCELE Clostridium celerecrescens
CLOCL Clostridium clostridioforme
CLOCO Clostridium cochlearium
CLOCOCL Clostridium cocleatum
CD*2 Clostridium difficile
CLODISP Clostridium disporicum
CLOFA Clostridium fallax
CLOGH*1 Clostridium ghoni
CLOGH Clostridium ghonii
CLOGL Clostridium glycolicum
CLOHA Clostridium haemolyticum
CLOHT Clostridium hastiforme
CLOHATH Clostridium hathewayi
CLOHI Clostridium histolyticum
CLOID Clostridium indolis
CLOIN Clostridium innocuum
CLOINTE Clostridium intestinale
CLOIR Clostridium irregulare
CLOIR*1 Clostridium irregularis
CLOCO*1 Clostridium lentoputrescens
CLOLEPT Clostridium leptum
CLOLI Clostridium limosum
CLOMA Clostridium malenominatum
CLONOVY Clostridium novyi
FLAVPLAU*1 Clostridium orbiscindens
CLOOR Clostridium oroticum
CLOBA*1 Clostridium paraperfringens
CLOPU Clostridium paraputrificum
CLOBA*2 Clostridium perenne
CLP Clostridium perfringens
CLOFA*1 Clostridium pseudofallax
CLOBU*1 Clostridium pseudotetanicum
CLOPS Clostridium putrefaciens
CLORA Clostridium ramosum
CLOSAR Clostridium sardiniense
CLOSE Clostridium septicum
CLOSO Clostridium sordellii
CLOSH Clostridium sphenoides
CLOSPIR Clostridium spiroforme
CLOSP Clostridium sporogenes
CLOSPOR Clostridium sporosphaeroides
CLOSU Clostridium subterminale
CLOSY Clostridium symbiosum
CLOTE Clostridium tertium
CLOTT Clostridium tetani
FILVIL*1 Clostridium villosum
CLONPERF Clostridium, not C. perfringens
COSP Coliform bacteria
COLLSP Collinsella
COLAER Collinsella aerofaciens
COLLINTE Collinsella intestinalis
COLLSTER Collinsella stercoris
COMSP Comamonas
DELFAC*1 Comamonas acidovorans
COMAQUA Comamonas aquatica
COMKERS Comamonas kerstersii
COMTR Comamonas terrigena
COMTE Comamonas testosteroni
COPRSP Coprococcus
COPREUTA Coprococcus eutactus
CORGN Corynebacterium
CORACC Corynebacterium accolens
CORA Corynebacterium afermentans
CORAA Corynebacterium afermentans afermentans
CORAL Corynebacterium afermentans lipophilum
CORAMM Corynebacterium ammoniagenes
CORAMY Corynebacterium amycolatum
CORAPP Corynebacterium appendicis
CORAQL Corynebacterium aquilae
CORARG Corynebacterium argentoratense
CORATY Corynebacterium atypicum
CORAR Corynebacterium aurimucosum
CORARS Corynebacterium auris
CORARSC Corynebacterium auriscanis
CORBET Corynebacterium beticola
CORBO Corynebacterium bovis
CORCAL Corynebacterium callunae
CORCAM Corynebacterium camporealensis
CORCAP Corynebacterium capitovis
CORCAS Corynebacterium casei
CORCSP Corynebacterium caspium
CORCIC Corynebacterium ciconiae
CORCON Corynebacterium confusum
CORCOY Corynebacterium coyleae
CORCY Corynebacterium cystitidis
CORDI Corynebacterium diphtheriae
CORDUR Corynebacterium durum
COREFF Corynebacterium efficiens
RHOEQ*2 Corynebacterium equi
CORFAL Corynebacterium falsenii
RHOFASC*2 Corynebacterium fascians
CORFEL Corynebacterium felinum
CORFVS Corynebacterium flavescens
CORST*1 Corynebacterium flavidum
CORFRE Corynebacterium freneyi
CORGEN Corynebacterium genitalium
CORGLA Corynebacterium glaucum
CORGLU Corynebacterium glucuronolyticum
CORGL Corynebacterium glutamicum
CORHAL Corynebacterium halotolerans
ARCHA*1 Corynebacterium hemolyticum
CORHOA Corynebacterium hoagii
CORPD*1 Corynebacterium hofmannii
CORIMI Corynebacterium imitans
CORJK Corynebacterium jeikeium
CORKRO Corynebacterium kroppenstedtii
CORKU Corynebacterium kutscheri
CORGL*1 Corynebacterium lilium
CORLIP Corynebacterium lipophiloflavum
CORMAC Corynebacterium macginleyi
CORMAN Corynebacterium manihot
CORMSL Corynebacterium massiliense
CORMST Corynebacterium mastitidis
CORMA Corynebacterium matruchotii
CORMED Corynebacterium mediolanum
CORMI Corynebacterium minutissimum
CORVAR*1 Corynebacterium mooreparkense
CORMUC Corynebacterium mucifaciens
CORMRS Corynebacterium murisepticum
CORKU*1 Corynebacterium murium
CORMY Corynebacterium mycetoides
CORNEP Corynebacterium nephridii
CORAR*1 Corynebacterium nigricans
CORPS*1 Corynebacterium ovis
TSUKPAUR*2 Corynebacterium paurometabolum
CORPHO Corynebacterium phocae
CORPI Corynebacterium pilosum
CORPRO Corynebacterium propinquum
CORPD Corynebacterium pseudodiphtheriticum
CORPST Corynebacterium pseudogenitalium
CORPS Corynebacterium pseudotuberculosis
CORPSM Corynebacterium pseudotuberculostearicum
ARCPY*2 Corynebacterium pyogenes
CORPYRU Corynebacterium pyruviciproducens
CORRE Corynebacterium renale
CORRES Corynebacterium resistens
CORRIE Corynebacterium riegelii
CORRUB Corynebacterium rubrum
CORGLU*1 Corynebacterium seminale
CORSIM Corynebacterium simulans
CORSIN Corynebacterium singulare
CORSPI Corynebacterium sphenisci
CORSPM Corynebacterium spheniscorum
CORST Corynebacterium striatum
CORSUI Corynebacterium suicordis
CORSUN Corynebacterium sundsvallense
CORTEN Corynebacterium tenuis
CORTER Corynebacterium terpenotabidum
CORTES Corynebacterium testudinoris
CORTHO Corynebacterium thomssenii
CORTUB Corynebacterium tuberculostearicum
CORTUSC Corynebacterium tuscaniense
CORUL Corynebacterium ulcerans
CORUR Corynebacterium urealyticum
CORURE Corynebacterium ureicelerivorans
CORVAR Corynebacterium variabile
CORVAR*3 Corynebacterium variabilis
CORVIS Corynebacterium viscosum
CORVIT Corynebacterium vitaeruminis
CORVIT*2 Corynebacterium vitarumen
CORVIT*3 Corynebacterium vitaruminis
CORXE Corynebacterium xerosis
CORNCD Corynebacterium, not C. diphtheriae
CORNCJ Corynebacterium, not C. jeikeium
CORTOX Corynebacterium, toxigenic
CORGPB coryneform gram positive bacilli
CXLSU Coxiella
CXLBU Coxiella burnetii
CROSP Cronobacter
CRODUB Cronobacter dublinensis
CROMAL Cronobacter malonaticus
CROMUY Cronobacter muytjensii
CROSAK Cronobacter sakazakii
CROTUR Cronobacter turicensis
CRYPSP Cryptobacterium
CRYPCURT Cryptobacterium curtum
CUPRSP Cupriavidus
CUPRBASI Cupriavidus basilensis
CUPRGILA Cupriavidus gilardii
CUPRMETA Cupriavidus metallidurans
CUPRNECA Cupriavidus necator
CUPRPAUC Cupriavidus pauculus
CUPRRESP Cupriavidus respiraculi
CURTOSP Curtobacterium
CURTOALBI Curtobacterium albidum
CUTISP Cutibacterium
PRPAC Cutibacterium acnes
PEDOHEPA*3 Cytophaga heparina
DEINOSP Deinococcus
DELFSP Delftia
DELFAC Delftia acidovorans
DERMASP Dermabacter
DERMAHOM Dermabacter hominis
DERMSP Dermacoccus
DENISH Dermacoccus nishinomiyaensis
DERMATSP Dermatophilus
DERMATCON Dermatophilus congolensis
DERMATCON*1 Dermatophilus pedis
DSMSP Desulfomonas
DSVSP Desulfovibrio
DSVDE Desulfovibrio desulfuricans
DSVPIG Desulfovibrio piger
DSVVUL Desulfovibrio vulgaris
DIALSP Dialister
DIALMICR Dialister micraerophilus
DIALPNEU Dialister pneumosintes
DICSP Dichelobacter
DICNO Dichelobacter nodosus
DIETSP Dietzia
DIETCINN Dietzia cinnamea
DIPTH Diphtheroids
DIPTHAE Diphtheroids, aerobic
DIPTHAN Diphtheroids, anaerobic
DOLOSP Dolosicoccus
DOLOPAUC Dolosicoccus paucivorans
DOLOSSP Dolosigranulum
DOLOPIGR Dolosigranulum pigrum
DORESP Dorea
DOREFORM Dorea formicigenerans
DORELONG Dorea longicatena
DYELSP Dyella
DYSGSP Dysgonomonas
DYSGCAPN Dysgonomonas capnocytophagoides
DYSGGADE Dysgonomonas gadei
EDWSP Edwardsiella
EDWTR*1 Edwardsiella anguillimortifera
EDWHO Edwardsiella hoshinae
EDWIC Edwardsiella ictaluri
EDWTR Edwardsiella tarda
EGGESP Eggerthella
EUBLE Eggerthella lenta
EGGESINE Eggerthella sinesis
EGGERSP Eggerthia
LACCA Eggerthia catenaformis
EHRLSP Ehrlichia
EIKSP Eikenella
EIC Eikenella corrodens
ELIZSP Elizabethkingia
ELIZME Elizabethkingia meningoseptica
EMPSP Empedobacter
EMPBRE Empedobacter brevis
ESP Enterobacter
EA*1 Enterobacter aerogenes
PANAG*2 Enterobacter agglomerans
PANAG*1 Enterobacter agglomerans group
ENTAU Enterobacter amnigenus
ENTAB Enterobacter asburiae
ENTCAN Enterobacter cancerogenus
ENC Enterobacter cloacae
ENCCX Enterobacter cloacae complex
ENTEDISS Enterobacter cloacae dissolvens
ENTECOWA*1 Enterobacter cowanii
ENTEDISS*2 Enterobacter dissolvens
ENTGE*1 Enterobacter gergoviae
HA*1 Enterobacter hafniae
ENTHO Enterobacter hormaechei
KLUINTE*1 Enterobacter intermedius
ENTEKOBE Enterobacter kobei
SL*1 Enterobacter liquefaciens
ENTELUDW Enterobacter ludwigii
ENTENIMI*2 Enterobacter nimipressuralis
ENTEPYRI*1 Enterobacter pyrinus
ENOT Enterobacteriaceae
ENTSP Enterococcus
ENTEASIN Enterococcus asini
ENTA Enterococcus avium
ENTECANI Enterococcus canis
ENTCA Enterococcus casseliflavus
ENTECECO Enterococcus cecorum
ENTDI Enterococcus dispar
ENTD Enterococcus durans
ENTFS Enterococcus faecalis
ENTFM Enterococcus faecium
ENTCA*1 Enterococcus flavescens
ENTGA Enterococcus gallinarum
ENTEGILV Enterococcus gilvus
ENTEHAEM Enterococcus haemoperoxidus
ENTEHERM Enterococcus hermanniensis
ENTHR Enterococcus hirae
ENTEITAL Enterococcus italicus
ENTMA Enterococcus malodoratus
ENTEMORA Enterococcus moraviensis
ENTMU Enterococcus mundtii
ENTEPALL Enterococcus pallens
ENTEPHOE Enterococcus phoeniculicola
ENTPS Enterococcus pseudoavium
ENTRA Enterococcus raffinosus
ENTERATT Enterococcus ratti
ENTESACC Enterococcus saccharolyticus
ENTEITAL*1 Enterococcus saccharominimus
LACTGARV*2 Enterococcus seriolicida
TETRSOLI*1 Enterococcus solitarius
ENTESULF Enterococcus sulfureus
ENTEVILL Enterococcus villorum
ECO157 Enterohemorrhagic Escherichia coli, serotype O157:H7
ECEP Enteropathogenic Escherichia coli
ERWSP Erwinia
PANANAN*1 Erwinia ananas
ENTCAN*2 Erwinia cancerogena
ENTEDISS*1 Erwinia dissolvens
PANAG*3 Erwinia herbicola-Enterobacter agglomerans group
ENTENIMI*1 Erwinia nimipressuralis
ERWPERS Erwinia persicina
PANANAN*2 Erwinia uredovora
ERYSP Erysipelothrix
ERYINOP Erysipelothrix inopinata
ERYRH*1 Erysipelothrix insidiosa
ERYRH Erysipelothrix rhusiopathiae
ERYTONS Erysipelothrix tonsillarum
ESCSP Escherichia
LECAD*1 Escherichia adecarboxylata
ESCALB Escherichia albertii
EC Escherichia coli
ESCFE Escherichia fergusonii
ESCHE Escherichia hermannii
ESCVU Escherichia vulneris
EUBSP Eubacterium
COLAER*1 Eubacterium aerofaciens
PSALA*1 Eubacterium alactolyticum
EUBBARK Eubacterium barkeri
EUBBIFO Eubacterium biforme
EUBBR Eubacterium brachy
EUBBUDA Eubacterium budayi
EUBBUDA*1 Eubacterium cadaveris
EUBCALL Eubacterium callanderi
EUBCM Eubacterium combesii
EUBCN Eubacterium contortum
EUBCYLI Eubacterium cylindroides
EUBDOLI Eubacterium dolichum
EUBELIG Eubacterium eligens
SLACEXIG*1 Eubacterium exiguum
ATOFOSS*1 Eubacterium fossor
EUBHADR Eubacterium hadrum
EUBHALL Eubacterium hallii
EUBINFI Eubacterium infirmum
EUBLE*1 Eubacterium lentum
EUBLI Eubacterium limosum
EUBMINU Eubacterium minutum
EUBMO Eubacterium moniliforme
EUBNI Eubacterium nitrogenes
EUBNO Eubacterium nodatum
FLAVPLAU*2 Eubacterium plautii
EUBRAMU Eubacterium ramulus
EUBRECT Eubacterium rectale
EUBSA Eubacterium saburreum
EUBSAPH Eubacterium saphenum
EUBSIRA Eubacterium siraeum
EUBSUL Eubacterium sulci
EUBTE Eubacterium tenue
MOGTIM*1 Eubacterium timidum
EUBVENT Eubacterium ventriosum
EUBYU Eubacterium yurii
EWISP Ewingella
EWIAM Ewingella americana
EXIGSP Exiguobacterium
EXIGACET Exiguobacterium acetylicum
CF*3 Extended spectrum beta-lactamase producing Citrobacter freundii
ENC*5 Extended spectrum beta-lactamase producing Enterobacter cloacae
EC*1 Extended spectrum beta-lactamase producing Escherichia coli
KO*1 Extended spectrum beta-lactamase producing Klebsiella oxytoca
KP*4 Extended spectrum beta-lactamase producing Klebsiella pneumoniae
PM*2 Extended spectrum beta-lactamase producing Proteus mirabilis
SHIGD*2 Extended spectrum beta-lactamase producing Shigella sonnei
FACKSP Facklamia
FACKHOMI Facklamia hominis
FACKIGNA Facklamia ignava
FACKLANG Facklamia languida
FACKSOUR Facklamia sourekii
FACKTABA Facklamia tabacinasalis
FAECSP Faecalibacterium
FAECPRAU Faecalibacterium prausnitzii
MOBMU*1 Falcivibrio grandis
MOBCU*1 Falcivibrio vaginalis
FILISP Filifactor
FILALO Filifactor alocis
FILVIL Filifactor villosus
FINESP Finegoldia
FINMAG Finegoldia magna
PSORY*1 Flavimonas oryzihabitans
FLASP Flavobacterium
MICRARBO*1 Flavobacterium arborescens
CHRIND*3 Flavobacterium aureum
EMPBRE*1 Flavobacterium breve
FLADEVO Flavobacterium devorans
CHRGLE*1 Flavobacterium gleum
PEDOHEPA*2 Flavobacterium heparinum
CHRIND*2 Flavobacterium indologenes
MICRMARI*1 Flavobacterium marinotypicum
MICRMARI*2 Flavobacterium maritypicum
ELIZME*1 Flavobacterium meningosepticum
SPHMI Flavobacterium mitzutaii
SPHMU*2 Flavobacterium multivorum
MYROD*1 Flavobacterium odoratum
SPMPA*1 Flavobacterium paucimobilis
SPHST*1 Flavobacterium spiritivorum
SPHTH*1 Flavobacterium thalpophilum
SPHST*2 Flavobacterium yabuuchiae
FLAVSP Flavonifractor
FLAVPLAU Flavonifractor plautii
FLUOSP Fluoribacter
LEGBOZE*1 Fluoribacter bozemanae
FLDUM*1 Fluoribacter dumoffii
LEGGO*1 Fluoribacter gormanii
FRASP Francisella
FRATU Francisella tularensis
FSU Fusobacterium
FILALO*1 Fusobacterium alocis
FUSCANI Fusobacterium canifelinum
FUSEQUI Fusobacterium equinum
FUSGO Fusobacterium gonidiaformans
FUSMO Fusobacterium mortiferum
FUSNA Fusobacterium naviforme
FUSNC Fusobacterium necrogenes
FUSNE Fusobacterium necrophorum
FUSND Fusobacterium necrophorum fundiliforme
FUSNN Fusobacterium necrophorum necrophorum
FUSNU Fusobacterium nucleatum
FUSNS Fusobacterium nucleatum fusiforme
FUSNL Fusobacterium nucleatum nucleatum
FUSNP Fusobacterium nucleatum polymorphum
FUSPE Fusobacterium periodonticum
FLAVPLAU*3 Fusobacterium plauti
FUSNP*1 Fusobacterium polymorphum
FAECPRAU*1 Fusobacterium prausnitzii
FUSRU Fusobacterium russii
EUBSUL*1 Fusobacterium sulci
FUSUL Fusobacterium ulcerans
FUSVA Fusobacterium varium
GALLSP Gallicola
GALLBARN Gallicola barnesae
GS Gamma (non)-hemolytic streptococcus
GARSP Gardnerella
GV Gardnerella vaginalis
GEMSP Gemella
GEMBERG Gemella bergeriae
GEMHA Gemella haemolysans
GEMMO Gemella morbillorum
GEMSANG Gemella sanguinis
GEOBSP Geobacillus
GEOBSTEA Geobacillus stearothermophilus
GEOBTHER Geobacillus thermodenitrificans
GEOBTHERM Geobacillus thermoglucosidasius
GLOBSP Globicatella
GLOBSANG Globicatella sanguinis
GLOBSULF Globicatella sulfidifaciens
GORDSP Gordonia
GORDBRON Gordonia bronchialis
GORDOTIT Gordonia otitidis
GORDPOLY Gordonia polyisoprenivorans
GORDRUBR Gordonia rubripertincta
GORDRUBR*1 Gordonia rubropertinctus
GORDSPUT Gordonia sputi
GORDTERR Gordonia terrae
GNR Gram-negative bacillus
GNRF Gram-negative bacillus, fermentative
GNRNF Gram-negative bacillus, non-fermentative
GNCB Gram-negative coccobacillus
GNC Gram-negative coccus
GNDC Gram-negative diplococcus
GNPB Gram-negative pleomorphic bacillus
GPR Gram-positive bacillus
GPCB Gram-positive coccobacillus
GPC Gram-positive coccus
GPDC Gram-positive diplococcus
GVR Gram-variable bacillus
GVCB Gram-variable coccobacillus
GVC Gram-variable coccus
GRANSP Granulicatella
GRADJ Granulicatella adiacens
GRANELEG Granulicatella elegans
GRIMSP Grimontia
GRIMHOLL Grimontia hollisae
HS Haemophilus
HAEACT*2 Haemophilus actinomycetemcomitans
HAEAEGY Haemophilus aegyptius
HAEAP*1 Haemophilus aphrophilus
HAEHAEM*1 Haemophilus canis
HAEDU Haemophilus ducreyi
HAEHAEM Haemophilus haemoglobinophilus
HAEHA Haemophilus haemolyticus
HIU Haemophilus influenzae
HAEPAH Haemophilus parahaemolyticus
HP Haemophilus parainfluenzae
HAEPITT Haemophilus pittmaniae
AGGRSEGN*1 Haemophilus segnis
HAFSP Hafnia
HA Hafnia alvei
HALOSP Halomonas
HALOVENU Halomonas venusta
HELCSP Helcococcus
HELCKUNZ Helcococcus kunzii
HELCSUEC Helcococcus sueciensis
HELSP Helicobacter
HELACIN Helicobacter acinonychis
HELACIN*1 Helicobacter acinonyx
HELAURA Helicobacter aurati
HELBILI Helicobacter bilis
HELBIZZ Helicobacter bizzozeroni
HELCANA Helicobacter canadensis
HELCANI Helicobacter canis
HELCHOL Helicobacter cholecystus
HELCI Helicobacter cinaedi
HELFELI Helicobacter felis
HELFE Helicobacter fennelliae
HELGANM Helicobacter ganmani
HELHEPA Helicobacter hepaticus
HELMESO Helicobacter mesocricetorum
HELMURI Helicobacter muridarum
HELMU Helicobacter mustelae
HELPY*2 Helicobacter nemestrinae
HELPAME Helicobacter pametensis
HELPULL Helicobacter pullorum
HELPY Helicobacter pylori
HELRA Helicobacter rappini
HELRODE Helicobacter rodentium
HELSALO Helicobacter salomonis
HELTROG Helicobacter trogontum
HELTYPH Helicobacter typhlonius
BORPE*1 Hemophilus pertussis
HERBSP Herbaspirillum
HOLDSP Holdemania
HOLDFILI Holdemania filiformis
IGNASP Ignavigranum
IGNARUOF Ignavigranum ruoffiae
INQUSP Inquilinus
INQULIMO Inquilinus limosus
JANISP Janibacter
JANIHOYL Janibacter hoylei
JONSP Jonesia
JONDE Jonesia denitrificans
KERSSP Kerstersia
KERSGYIO Kerstersia gyiorum
KINSP Kingella
KINDE Kingella denitrificans
SUTIND*1 Kingella indologenes
KINKI Kingella kingae
KINORAL Kingella oralis
KINPOTU Kingella potus
KS Klebsiella
EA Klebsiella aerogenes
KLEGRA Klebsiella granulomatis
RAOORN*1 Klebsiella ornithinolytica
KO Klebsiella oxytoca
KLEOZ*1 Klebsiella ozaenae
RAOPLA*1 Klebsiella planticola
KP Klebsiella pneumoniae
KLEOZ Klebsiella pneumoniae ozaenae
KLEPNE Klebsiella pneumoniae pneumoniae
KLERH Klebsiella pneumoniae rhinoscleromatis
KLERH*1 Klebsiella rhinoscleromatis
KLESING Klebsiella singaporensis
RAOTER*1 Klebsiella terrigena
RAOPLA*2 Klebsiella trevisanii
KLEVARI Klebsiella variicola
KLUSP Kluyvera
KLUAS Kluyvera ascorbata
KLUCR Kluyvera cryocrescens
KLUGEOR Kluyvera georgiana
KLUINTE Kluyvera intermedia
KOCSP Kocuria
KOCROS*2 Kocuria erythromyxa
KOCKRI Kocuria kristinae
KOCROS Kocuria rosea
KOCVAR Kocuria varians
KOSASP Kosakonia
ENTECOWA Kosakonia cowanii
YOKRE*2 Koserella trabulsii
KROPSP Kroppenstedtia
KROPEBUR Kroppenstedtia eburnea
KURSP Kurthia
KURBE Kurthia bessoni
KYTSP Kytococcus
KYSED Kytococcus sedentarius
LACHSP Lachnoanaerobaculum
LACHORAL Lachnoanaerobaculum orale
LS Lactobacillus
LACAC Lactobacillus acidophilus
LACAM Lactobacillus amylovorus
LACANTR Lactobacillus antri
LACPLAN*1 Lactobacillus arizonensis
LACBRE Lactobacillus brevis
LACBUCH Lactobacillus buchneri
LACCS Lactobacillus casei
LACCA*2 Lactobacillus catenaformis
LACFER*1 Lactobacillus cellobiosus
WEISCONF*1 Lactobacillus confusus
LACCR Lactobacillus crispatus
LACDELB Lactobacillus delbrueckii
LACFER Lactobacillus fermentum
LACGA Lactobacillus gasseri
LACGAST Lactobacillus gastricus
LACINER Lactobacillus iners
LACJEN Lactobacillus jensenii
LACJO Lactobacillus johnsonii
LACKALI Lactobacillus kalixensis
ATOMIN*1 Lactobacillus minutus
LACOR Lactobacillus oris
LACPARA Lactobacillus paracasei
LACPLAN Lactobacillus plantarum
LACREUT Lactobacillus reuteri
LACRHAM Lactobacillus rhamnosus
ATORIM*1 Lactobacillus rimae
LACSAKE Lactobacillus sakei
LACSALI Lactobacillus salivarius
LACULTU Lactobacillus ultunensis
LACVA Lactobacillus vaginalis
LACVITU Lactobacillus vitulinus
LACTSP Lactococcus
LACTGARV Lactococcus garvieae
LACTLACT Lactococcus lactis
LECSP Leclercia
LECAD Leclercia adecarboxylata
LEGS Legionella
LEGADEL Legionella adelaidensis
LEGAN Legionella anisa
LEGBELI Legionella beliardensis
LEGBI Legionella birminghamensis
LEGBOZE Legionella bozemanae
LEGBR Legionella brunensis
LEGBUSA Legionella busanensis
LEGCH Legionella cherrii
LEGCI Legionella cincinnatiensis
LEGDRAN Legionella drancourtii
LEGDROZ Legionella drozanskii
FLDUM Legionella dumoffii
LEGER Legionella erythra
LEGFAIR Legionella fairfieldensis
LEGFALL Legionella fallonii
LEGFE Legionella feeleii
LEGGE Legionella geestiana
LEGGO Legionella gormanii
LEGHA Legionella hackeliae
LEGIS Legionella israelensis
LEGJA Legionella jamestowniensis
LEGJO Legionella jordanis
LEGLANS Legionella lansingensis
LEGLO Legionella londiniensis
LEGLB Legionella longbeachae
LEGLYTI Legionella lytica
TATMAC Legionella maceachernii
TATMIC Legionella micdadei
LEGMO Legionella moravica
LEGNA Legionella nautarum
LEGOK Legionella oakridgensis
LEGPA Legionella parisiensis
TATMIC*2 Legionella pittsburghensis
LP Legionella pneumophila
LEGQA Legionella quateirensis
LEGQI Legionella quinlivanii
LEGROWB Legionella rowbothamii
LEGRU Legionella rubrilucens
LEGSH Legionella sainthelensi
LEGSA Legionella santicrucis
LEGSK Legionella shakespearei
LEGSP Legionella spiritensis
LEGST Legionella steigerwaltii
LEGTAUR Legionella taurinensis
LEGTU Legionella tucsonensis
LEGWA Legionella wadsworthii
LEGWALT Legionella waltersii
LEGWO Legionella worsleiensis
LEIFSP Leifsonia
LEIFAQUA Leifsonia aquatica
LEIFXYLI Leifsonia xyli
LELLSP Lelliottia
ENTAU*1 Lelliottia amnigena
ENTENIMI Lelliottia nimipressuralis
LEMSU Leminorella
LEMGR Leminorella grimontii
LEMRI Leminorella richardii
LEPSP Leptospira
LEPIN Leptospira interrogans
LEPTS Leptotrichia
EUBSA*1 Leptotrichia aerogenes
LEPTB Leptotrichia buccalis
LEPTGOOD Leptotrichia goodfellowii
LEPTTREV Leptotrichia trevisanii
LEPTWADE Leptotrichia wadei
LEUC Leuconostoc
LEUCI*1 Leuconostoc amelibiosum
LEUCI Leuconostoc citreum
LEULA Leuconostoc lactis
LEUME Leuconostoc mesenteroides
LEUPS Leuconostoc pseudomesenteroides
CITAM*1 Levinea amalonatica
CITKO*2 Levinea malonitica
LISSP Listeria
JONDE*1 Listeria denitrificans
LISGR Listeria grayi
LISTIN Listeria innocua
LISIVAN Listeria ivanovii
LM Listeria monocytogenes
LISSEE Listeria seeligeri
LISWELS Listeria welshimeri
LISTSP Listonella
VIBHAR*2 Lucibacterium harveyi
MACSP Macrococcus
MACBOVI Macrococcus bovicus
MACCARO Macrococcus carouselicus
MACCAS Macrococcus caseolyticus
MACEQUI Macrococcus equipercicus
MANNSP Mannheimia
PASHE Mannheimia haemolytica
MASSSP Massilia
MASSTIMO Massilia timonae
MEGASP Megamonas
MEGAHYPE Megamonas hypermegale
MEGAHYPE*1 Megamonas hypermegas
MEGSP Megasphaera
MEGEL Megasphaera elsdenii
SA*4 Methicillin-resistant Staphylococcus aureus
METSP Methylobacterium
METME Methylobacterium mesophilicum
METZATM Methylobacterium zatmanii
MICRSP Microbacterium
MICRARBO Microbacterium arborescens
MICRHYDR Microbacterium hydrocarbonoxydans
MICRIMPE Microbacterium imperiale
MICRLACT Microbacterium lacticum
MICRLIQU Microbacterium liquefaciens
MICRMARI Microbacterium maritypicum
MICROXYD Microbacterium oxydans
MICRPARA Microbacterium paraoxydans
MICRRESI Microbacterium resistens
MICG Micrococcus
MICANT Micrococcus antarcticus
MICLUT*3 Micrococcus flavus
NESTHALO*1 Micrococcus halobius
KOCKRI*1 Micrococcus kristinae
MICLUT Micrococcus luteus
MICLYL Micrococcus lylae
MICLUT*1 Micrococcus lysodeikticus
PEPNI*1 Micrococcus niger
MICNIS Micrococcus nishinomiyaensis
KOCROS*1 Micrococcus roseus
KYSED*1 Micrococcus sedentarius
MICROMSP Micromonospora
MICROMCHAL Micromonospora chalcea
NOCBREV*1 Micropolyspora brevicatena
MITSP Mitsuokella
PREDEN*1 Mitsuokella dentalis
MITML Mitsuokella multacida
MOBSP Mobiluncus
MOBCU Mobiluncus curtisii
MOBMU Mobiluncus mulieris
MOESP Moellerella
MOEWI Moellerella wisconsensis
MOGSP Mogibacterium
MOGDIVE Mogibacterium diversum
MOGNEGL Mogibacterium neglectum
MOGTIM Mogibacterium timidum
MOGVESC Mogibacterium vescum
MOS Moraxella
RIEMANAT*1 Moraxella anatipestifer
MORAT Moraxella atlantae
MORBOEV Moraxella boevrei
MORBO Moraxella bovis
MORCANI Moraxella canis
MORCAPR Moraxella caprae
MORCA Moraxella catarrhalis
MORCUNI Moraxella cuniculi
KINKI*1 Moraxella kingae
KINKI*2 Moraxella kingii
MORLA Moraxella lacunata
MORLINC Moraxella lincolnii
MORLA*3 Moraxella liquefaciens
MORNL Moraxella nonliquefaciens
MOROBLO Moraxella oblonga
MOROS Moraxella osloensis
MOROVIS Moraxella ovis
PSYPHEN*1 Moraxella phenylpyruvica
OLIUT*1 Moraxella urethralis
MORSP Morganella
MORMO Morganella morganii
MORSI Morganella morganii sibonii
ALCXYL*2 multidrug resistant Achromobacter xylosoxidans
ACS*1 multidrug resistant Acinetobacter
ENTAB*2 multidrug resistant Enterobacter asburiae
KP*2 multidrug resistant Klebsiella pneumoniae
MORMO*1 multidrug resistant Morganella morganii
PA*2 multidrug resistant Pseudomonas aeruginosa
ENC*3 multiple drug-resistant Enterobacter cloacae
PM*1 multiple drug-resistant Proteus mirabilis
MYCSP Mycobacterium
MYCAB Mycobacterium abscessus
MYCAF Mycobacterium africanum
MYCAGRI Mycobacterium agri
MYCAICH Mycobacterium aichiense
MYCAL Mycobacterium alvei
MYCGO*1 Mycobacterium aquae
MYCAS Mycobacterium asiaticum
MYCAU Mycobacterium aurum
MYCAUST Mycobacterium austroafricanum
MYSCP Mycobacterium avium
MYCAV*2 Mycobacterium avium complex
MYCMA*1 Mycobacterium balnei
MYCBOEN Mycobacterium boenickei
MYCBOHE Mycobacterium bohemicum
MYCBO Mycobacterium bovis
MYCBRAN Mycobacterium branderi
MYCBRIS Mycobacterium brisbanense
MYCBRUM Mycobacterium brumae
MYCIN*1 Mycobacterium brunense
MYCCANA Mycobacterium canariasense
MYCCAN Mycobacterium canetti
MYCCAPR Mycobacterium caprae
MYCCELA Mycobacterium celatum
MYCCH Mycobacterium chelonae
MYCCHES Mycobacterium chesapeaki
MYCCHIT Mycobacterium chitae
MYCCHLO Mycobacterium chlorophenolicum
MYCCHUB Mycobacterium chubuense
MYCCO Mycobacterium confluentis
MYCCONS Mycobacterium conspicuum
MYCCOOK Mycobacterium cookii
MYCCOS Mycobacterium cosmeticum
MYCDIER Mycobacterium diernhoferi
MYCDORI Mycobacterium doricum
MYCDUVA Mycobacterium duvalii
MYCELEP Mycobacterium elephantis
MYCFALL Mycobacterium fallax
MYCFARC Mycobacterium farcinogenes
MYCFL Mycobacterium flavescens
MYCFOR Mycobacterium fortuitum
MYCFC Mycobacterium fortuitum complex
MYCFC*1 Mycobacterium fortuitum-chelonae complex
MYCFRED Mycobacterium frederiksbergense
MYCGADI Mycobacterium gadium
MYCGA Mycobacterium gastri
MYCGN Mycobacterium genavense
MYCFOR*1 Mycobacterium giae
MYCGILV Mycobacterium gilvum
MYCGOO Mycobacterium goodii
MYCGO Mycobacterium gordonae
MYCSI*1 Mycobacterium habana
MYCHA Mycobacterium haemophilum
MYCHASS Mycobacterium hassiacum
MYCHECK Mycobacterium heckeshornense
MYCHEID Mycobacterium heidelbergense
MYCHIBE Mycobacterium hiberniae
MYCHODL Mycobacterium hodleri
MYCHOLS Mycobacterium holsaticum
MYCHOUS Mycobacterium houstonense
MYCIMMU Mycobacterium immunogenum
MYCINTE Mycobacterium interjectum
MYCBINTE Mycobacterium intermedium
MYCIN Mycobacterium intracellulare
MYCPARAT*1 Mycobacterium johnei
MYCKA Mycobacterium kansasii
MYCKOMO Mycobacterium komossense
MYCKUBI Mycobacterium kubicae
MYCLACT Mycobacterium lacticola
MYCLACU Mycobacterium lacus
MYCLENT Mycobacterium lentiflavum
MYCLE Mycobacterium leprae
MYCKA*1 Mycobacterium luciflavum
MYCMADA Mycobacterium madagascariense
MYCMAGE Mycobacterium mageritense
MYCML Mycobacterium malmoense
MYCMA Mycobacterium marinum
MYCMIC Mycobacterium microti
MYCFOR*2 Mycobacterium minetti
MYCMONT Mycobacterium montefiorense
MYCMORI Mycobacterium moriokaense
MYCMUC Mycobacterium mucogenicum
MYCMURA Mycobacterium murale
MYCNEOA Mycobacterium neoaurum
MYCNEWO Mycobacterium neworleansense
MYCNO Mycobacterium nonchromogenicum
MYCNOVO Mycobacterium novocastrense
MYCOBUE Mycobacterium obuense
MYCPALU Mycobacterium palustre
MYCPARA Mycobacterium parafortuitum
MYCPAR Mycobacterium parascrofulaceum
MYCPARAT Mycobacterium paratuberculosis
MYCPARM Mycobacterium parmense
MYCPERE Mycobacterium peregrinum
MYCPH Mycobacterium phlei
MYCPHO Mycobacterium phocaicum
MYCPINN Mycobacterium pinnipedii
MYCMA*2 Mycobacterium platypoecilus
MYCPORC Mycobacterium porcinum
MYCPSYC Mycobacterium psychrotolerans
MYCRHOD Mycobacterium rhodesiae
MYCSC Mycobacterium scrofulaceum
MYCSEPT Mycobacterium septicum
MYCSHER Mycobacterium sherrisii
MYCSH Mycobacterium shimoidei
MYCSHOT Mycobacterium shottsii
MYCSI Mycobacterium simiae
MYCSM Mycobacterium smegmatis
MYCSPHA Mycobacterium sphagni
MYCSZ Mycobacterium szulgai
MYCTE Mycobacterium terrae
MYCTERR Mycobacterium terrae complex
MYCTH Mycobacterium thermoresistibile
MYCTOKA Mycobacterium tokaiense
MYCTRIP Mycobacterium triplex
MYCTR Mycobacterium triviale
TB Mycobacterium tuberculosis
TBCX Mycobacterium tuberculosis complex
MYCTUSC Mycobacterium tusciae
MYCUL Mycobacterium ulcerans
MYCVA Mycobacterium vaccae
MYCVANB Mycobacterium vanbaalenii
MYCWOLI Mycobacterium wolinskyi
MYCXE Mycobacterium xenopi
MYCAV Mycobacterium, avium-intracellulare group
MYCS Mycoplasma
MYCBU Mycoplasma buccale
MYCFA Mycoplasma faucium
MYCFE Mycoplasma fermentans
MYCGE Mycoplasma genitalium
MYCHO Mycoplasma hominis
MYCFE*1 Mycoplasma incognitus
MYCLI Mycoplasma lipophilum
MYCOR Mycoplasma orale
MYCPE Mycoplasma penetrans
MYCPIRU Mycoplasma pirum
MP Mycoplasma pneumoniae
MYCPR Mycoplasma primatum
MYCSA Mycoplasma salivarium
MYCSR Mycoplasma spermatophilum
MRYSP Myroides
MYROD Myroides odoratus
NS Neisseria
NEICA Neisseria canis
MORCA*2 Neisseria catarrhalis
NEICI Neisseria cinerea
MORCUNI*1 Neisseria cuniculi
NEIDENT Neisseria dentiae
NEIEL Neisseria elongata
NEIELOELO Neisseria elongata elongata
NEIELOGLY Neisseria elongata glycolytica
NEINI Neisseria elongata nitroreducens
NEIFL Neisseria flavescens
GC Neisseria gonorrhoeae
NEIIGUA Neisseria iguanae
NEILA Neisseria lactamica
NEIMACA Neisseria macacae
NM Neisseria meningitidis
NEIMU Neisseria mucosa
NEISORAL Neisseria oralis
MOROVIS*2 Neisseria ovis
NEIPA*1 Neisseria parelongata
NEISPERF Neisseria perflava
NEIPO Neisseria polysaccharea
NEISI Neisseria sicca
NEISU Neisseria subflava
NEIPA Neisseria weaveri
NEORSP Neorickettsia
NEORSENN Neorickettsia sennetsu
NESTSP Nesterenkonia
NESTHALO Nesterenkonia halobia
NOCSP Nocardia
NOCABSC Nocardia abscessus
NOCAFRI Nocardia africana
NOCANAE Nocardia anaemiae
NOCAOBE Nocardia aobensis
NOCARAO Nocardia araoensis
NOCARTH Nocardia arthritidis
NOCASIA Nocardia asiatica
NOCAS Nocardia asteroides
NOCASTE Nocardia asteroides complex
NOCBEIJ Nocardia beijingensis
NOCBR Nocardia brasiliensis
NOCBREV Nocardia brevicatena
NOCCARN Nocardia carnea
NOCOC*2 Nocardia caviae
NOCCYRI Nocardia cyriacigeorgica
NOCELEG Nocardia elegans
NOCFARC Nocardia farcinica
NOCHIGO Nocardia higoensis
NOCINOH Nocardia inohanensis
NOCKRUC Nocardia kruczakiae
NOCMEXI Nocardia mexicana
NOCNIIG Nocardia niigatensis
NOCNOVA Nocardia nova
AMYCORIE*1 Nocardia orientalis
NOCOC*3 Nocardia otitidiscaviarum
NOCOC Nocardia otitis caviarum
NOCPAUC Nocardia paucivorans
NOCPNEU Nocardia pneumoniae
NOCPSEU Nocardia pseudobrasiliensis
NOCSIEN Nocardia sienata
NOCTEST Nocardia testacea
NOCTRAN Nocardia transvalensis
NOCVETE Nocardia veterana
NOCYAMA Nocardia yamanashiensis
NOCASP Nocardiopsis
NOCADASS Nocardiopsis dassonvillei
NOCASYNN Nocardiopsos synnemataformans
NVS Nutritionally variant streptococci
OBPSU Obesumbacterium
OBESPROT Obesumbacterium proteus
OCHSP Ochrobactrum
OCHAN Ochrobactrum anthropi
OCHINTE Ochrobactrum intermedium
BACSPP Odoribacter
BACSP Odoribacter splanchnicus
OERSP Oerskovia
OLISP Oligella
OLIUR Oligella ureolytica
OLIUT Oligella urethralis
ORISP Orientia
ORTSU Orientia tsutsugamushi
PAESP Paenibacillus
PAEAGAR Paenibacillus agaridevorans
PAEALV Paenibacillus alvei
BEDAP Paenibacillus edaphicus
PAEVALI*1 Paenibacillus gordonae
PAELARV Paenibacillus larvae
PAELENT Paenibacillus lentimorbus
PAEMAC Paenibacillus macerans
PAEPABU Paenibacillus pabuli
PAEPOL Paenibacillus polymyxa
PAEPOPI Paenibacillus popilliae
PAEPROV Paenibacillus provencensis
PAETHIA Paenibacillus thiaminolyticus
PAEURIN Paenibacillus urinalis
PAEVALI Paenibacillus validus
PANDSP Pandoraea
PANDAPIS Pandoraea apista
PANDNORI Pandoraea norimbergensis
PANDPNOM Pandoraea pnomenusa
PANDPULM Pandoraea pulmonicola
PANDSPUT Pandoraea sputorum
PANOT Pantoea
PANAG Pantoea agglomerans
PANANAN*3 Pantoea ananas
PANANAN Pantoea ananatis
PANDI Pantoea dispersa
PARASP Parabacteroides
BACDT Parabacteroides distasonis
PARAGOLD Parabacteroides goldsteinii
BACMR Parabacteroides merdae
PARABSP Paraburkholderia
BURFUNG Paraburkholderia fungorum
PARSP Paracoccus
PARYEE Paracoccus yeei
PARASSP Parascardovia
PARADENT Parascardovia denticolens
PARVSP Parvimonas
PARVMICR Parvimonas micra
PASSP Pasteurella
PASAE Pasteurella aerogenes
PASBE Pasteurella bettyae
PASCABA Pasteurella caballi
PASCA Pasteurella canis
PASDA Pasteurella dagmatis
PASHE*1 Pasteurella haemolytica
PASMU Pasteurella multocida
PASMG Pasteurella multocida gallicida
PASMM Pasteurella multocida multocida
PASMS Pasteurella multocida septica
PASPN Pasteurella pneumotropica
PASSTOM Pasteurella stomatis
ACURE*1 Pasteurella ureae
PATUSP Patulibacter
PECSP Pectobacterium
PEDSP Pediococcus
PEDAC Pediococcus acidilactici
PEDPE Pediococcus pentosaceus
AEURQ*1 Pediococcus urinaeequi
PEDOSP Pedobacter
PEDOHEPA Pedobacter heparinus
PEDOPISC Pedobacter piscium
PSU Peptococcus
PEPTASAC*2 Peptococcus asaccharolyticus
PEPNI Peptococcus niger
STASL*1 Peptococcus saccharolyticus
PEPTSP Peptoniphilus
PEPTASAC Peptoniphilus asaccharolyticus
PEPTHARE Peptoniphilus harei
PEPTIVOR Peptoniphilus ivorii
PEPTLACR Peptoniphilus lacrimalis
PSS Peptostreptococcus
PSA Peptostreptococcus anaerobius
PEPTASAC*1 Peptostreptococcus asaccharolyticus
MEGEL*1 Peptostreptococcus elsdenii
PPSHY*1 Peptostreptococcus hydrogenalis
ANALAC*1 Peptostreptococcus lactolyticus
FINMAG*1 Peptostreptococcus magnus
PARVMICR*1 Peptostreptococcus micros
ANAOCTA*1 Peptostreptococcus octavius
ATOPAR*1 Peptostreptococcus parvulus
ANAPRE*1 Peptostreptococcus prevotii
BLAUPROD*2 Peptostreptococcus productus
ANATET*1 Peptostreptococcus tetradius
ANAVAG*1 Peptostreptococcus vaginalis
PHOSP Photobacterium
PHODAM Photobacterium damselae damselae
PHOTSP Photorhabdus
PHOTASYM Photorhabdus asymbiotica
XENLU Photorhabdus luminescens
PHOTTEMP Photorhabdus temperata
PLESP Plesiomonas
PLESH Plesiomonas shigelloides
PLURSP Pluralibacter
ENTGE Pluralibacter gergoviae
ENTEPYRI Pluralibacter pyrinus
PORSP Porphyromonas
PORAS Porphyromonas asaccharolyticus
PORCANG Porphyromonas cangingivalis
PORCANO Porphyromonas canoris
PORCANS Porphyromonas cansulci
PORCATO Porphyromonas catoniae
PORCIRC Porphyromonas circumdentaria
PORCREV Porphyromonas crevioricanis
POREN Porphyromonas endodontalis
PORGI Porphyromonas gingivalis
PORGING Porphyromonas gingivicanis
PORGULA Porphyromonas gulae
PORLE Porphyromonas levii
PORSA Porphyromonas macacae
PORSA*3 Porphyromonas salivosa
PORSOME Porphyromonas somerae
PRASP Pragia
PRAFO Pragia fontium
PRESP Prevotella
PREBI Prevotella bivia
PREBC Prevotella buccae
PREBU Prevotella buccalis
PRECO Prevotella corporis
PREDEN Prevotella dentalis
PREDE Prevotella denticola
PREDI Prevotella disiens
PREENOE Prevotella enoeca
PREHE Prevotella heparinolytica
PREIN Prevotella intermedia
PRELO Prevotella loescheii
PREMARS Prevotella marshii
PREM Prevotella melaninogenica
PREMULT Prevotella multiformis
PREMULTI Prevotella multisaccharivorax
PRENI Prevotella nigrescens
PREOR Prevotella oralis
PREORAL Prevotella oralis group
PREOS Prevotella oris
PREOU*2 Prevotella oulora
PREOU Prevotella oulorum
PREPALL Prevotella pallens
PRERU Prevotella ruminicola
PRESALI Prevotella salivae
PRESHAH Prevotella shahii
PRETANN Prevotella tannerae
PREVE Prevotella veroralis
PREZO*1 Prevotella zoogleoformans
PRPG Propionibacterium
PRPA Propionibacterium acidipropionici
PRPAC*6 Propionibacterium acnes
PRPAU Propionibacterium australiense
PROAV Propionibacterium avidum
PRPCY Propionibacterium cyclohexanicum
PRPF Propionibacterium freudenreichii
PROGR Propionibacterium granulosum
PFI*1 Propionibacterium innocuum
PRPJE Propionibacterium jensenii
PRPLY Propionibacterium lymphophilum
PRPMI Propionibacterium microaerophilum
PRPPR Propionibacterium prionicus
PRPRO Propionibacterium propionicum
PRPTH*1 Propionibacterium rubrum
PRPTH Propionibacterium thoenii
PROPISP Propioniferax
PFI Propioniferax innocus
PROPSP Propionimicrobium
PROPLYMP Propionimicrobium lymphophilum
PTS Proteus
PROTHAUS Proteus hauseri
PRVAL*1 Proteus inconstans, subgroup A
PM Proteus mirabilis
PRTMY Proteus myxofaciens
PRTPE Proteus penneri
PR*2 Proteus rettgeri
PV Proteus vulgaris
PRU Providencia
PRVAL Providencia alcalifaciens
PRVRU*2 Providencia friedericiana
PRVHE Providencia heimbachae
PR Providencia rettgeri
PRVRU Providencia rustigianii
PRS Providencia stuartii
PSEUDOCSP Pseudoclavibacter
PSEFSP Pseudoflavonifractor
PSEFCAPI Pseudoflavonifractor capillosus
PSP Pseudomonas
DELFAC*2 Pseudomonas acidovorans
PA Pseudomonas aeruginosa
PSEAL Pseudomonas alcaligenes
BURGL*1 Pseudomonas alliicola
BURGL*2 Pseudomonas antimicrobica
STEMA*5 Pseudomonas beteli
STEMA*2 Pseudomonas betle
BURCE*1 Pseudomonas cepacia
PST*3 Pseudomonas chloritidismutans
PSECH Pseudomonas chlororaphis
BURGL*3 Pseudomonas cocovenenans
ACDEL*1 Pseudomonas delafieldii
BREDIM*1 Pseudomonas diminuta
ACIDFACI*1 Pseudomonas facilis
PF Pseudomonas fluorescens
BURGL*4 Pseudomonas gladioli
CHSLU*1 Pseudomonas luteola
BURMA*1 Pseudomonas mallei
STEMA*1 Pseudomonas maltophilia
PSEMARG Pseudomonas marginalis
PSEMEN Pseudomonas mendocina
PSEMONT Pseudomonas monteilii
PSEMOSS Pseudomonas mosselii
BURCE*2 Pseudomonas multivorans
ALFE*2 Pseudomonas odorans
PSORY Pseudomonas oryzihabitans
SPMPA*3 Pseudomonas paucimobilis
PST*1 Pseudomonas perfectomarina
PSEPE Pseudomonas pertucinogena
RALPIC*2 Pseudomonas pickettii
PSEPS Pseudomonas pseudoalcaligenes
BURPM*4 Pseudomonas pseudomallei
PP Pseudomonas putida
SHEPF*1 Pseudomonas putrefaciens
BURPYRR*1 Pseudomonas pyrrocinia
PST Pseudomonas stutzeri
COMTE*1 Pseudomonas testosteroni
PSEVERO Pseudomonas veronii
BREVES*1 Pseudomonas vesicularis
PSEUSP Pseudoramibacter
PSALA Pseudoramibacter alactolyticus
PSEUDOXSP Pseudoxanthomonas
PSEUDOXKORE Pseudoxanthomonas koreensis
PSYCHRSP Psychrobacillus
PSYCH Psychrobacter
PSYIM Psychrobacter immobilis
PSYPHEN Psychrobacter phenylpyruvicus
RAHSP Rahnella
RAHAQ Rahnella aquatilis
RALSP Ralstonia
CUPRGILA*1 Ralstonia gilardii
RALINSI Ralstonia insidiosa
RALMAN Ralstonia mannitolilytica
RALPIC Ralstonia pickettii
CUPRRESP*1 Ralstonia respiraculi
RAOSP Raoultella
RAOORN Raoultella ornithinolytica
RAOPLA Raoultella planticola
RAOTER Raoultella terrigena
RGM Rapid growing mycobacteria
RHIZSP Rhizobium
RHIRAD Rhizobium radiobacter
RHIRUBI Rhizobium rubi
RHIVITI Rhizobium vitis
RHOSP Rhodococcus
TSUKPAUR*1 Rhodococcus aurantiacus
GORDBRON*1 Rhodococcus bronchialis
MYCCHLO*1 Rhodococcus chlorophenolicus
GORDSPUT*2 Rhodococcus chubuensis
RHOEQ Rhodococcus equi
RHOERYT Rhodococcus erythropolis
RHOFASC Rhodococcus fascians
RHOGLOB Rhodococcus globerulus
RHOGORD Rhodococcus gordoniae
RHOFASC*1 Rhodococcus luteus
GORDSPUT*1 Rhodococcus obuensis
RHORHOD Rhodococcus rhodochrous
RHORHOD*1 Rhodococcus roseus
GORDRUBR*2 Rhodococcus rubropertinctus
GORDTERR*1 Rhodococcus terrae
RICSP Rickettsia
RICAK Rickettsia akari
RICCO Rickettsia conorii
RICPARK Rickettsia parkeri
RICPR Rickettsia prowazekii
BARQUI*2 Rickettsia quintana
RICRI Rickettsia rickettsii
RICSIBI Rickettsia sibirica
ORTSU*1 Rickettsia tsutsugamushi
RICTY Rickettsia typhi
RIEMSP Riemerella
RIEMANAT Riemerella anatipestifer
ROBISP Robinsoniella
ROBIPEOR Robinsoniella peoriensis
BARELIZ*1 Rochalimaea elizabethae
BARHEN*1 Rochalimaea henselae
BARQUI*1 Rochalimaea quintana
BARVIN*1 Rochalimaea vinsonii
ROSE Roseomonas
ROSECERV Roseomonas cervicalis
ROSEGILA Roseomonas gilardii
ROSEMUCO Roseomonas mucosa
ROTSP Rothia
ROTAERI Rothia aeria
ROTDE Rothia dentocariosa
ROTHMU Rothia mucilaginosa
RUMISP Ruminococcus
RUMIGNAV Ruminococcus gnavus
RUMHAN*2 Ruminococcus hansenii
BLAUPROD*1 Ruminococcus productus
RUMMSP Rummeliibacillus
RUMMPYCN Rummeliibacillus pycnus
SACCSP Saccharomonospora
SACCGLAU Saccharomonospora glauca
SACCVIRI Saccharomonospora viridis
SACCHSP Saccharopolyspora
SACCHRECT Saccharopolyspora rectivirgula
SAS Salmonella
SALBONG Salmonella bongori
SALENT Salmonella enterica
SARCISP Sarcina
MICLUT*2 Sarcina luteus
SARCIVENT Sarcina ventriculi
SCARSP Scardovia
SCARINOP Scardovia inopinata
SELSP Selenomonas
SELAR Selenomonas artemidis
SELDI Selenomonas dianae
SELFL Selenomonas flueggei
SELIN Selenomonas infelix
SELNO Selenomonas noxia
SELST Selenomonas sputigena
SERSP Serpulina
BRACPILO*1 Serpulina pilosicoli
SSP Serratia
SEREN Serratia entomophila
SERFI Serratia ficaria
SERFO Serratia fonticola
SERGR Serratia grimesii
SL Serratia liquefaciens
SM Serratia marcescens
SR*1 Serratia marinorubra
SEROD Serratia odorifera
SERPL Serratia plymuthica
SERPS Serratia proteamaculans
SERQUIN Serratia quinivorans
SR Serratia rubidaea
SERUREI Serratia ureilytica
SHESP Shewanella
SHEALGA Shewanella algae
SHEPF Shewanella putrefaciens
SHISP Shigella
SHIGC Shigella boydii
SHIGA Shigella dysenteriae
SHIGB Shigella flexneri
SHIGD Shigella sonnei
SIMOSP Simonsiella
ALYSCRAS*1 Simonsiella crassa
SIMOMUEL Simonsiella muelleri
SLACSP Slackia
SLACEXIG Slackia exigua
SLACHELI Slackia heliotrinireducens
STRBA Small-colony-forming beta-hemolytic group A streptococci
STRBC Small-colony-forming beta-hemolytic group C streptococci
STRBG Small-colony-forming beta-hemolytic group G streptococci
SNEASP Sneathia
SNEASANG Sneathia sanguinegens
SOLISP Solibacillus
BSILV Solibacillus silvestris
SOLOSP Solobacterium
SOLOMOOR Solobacterium moorei
SPHSP Sphingobacterium
SPHFAEC Sphingobacterium faecium
PEDOHEPA*1 Sphingobacterium heparinum
SPHMI*1 Sphingobacterium mizutae
SPHMU Sphingobacterium multivorum
PEDOPISC*1 Sphingobacterium piscium
SPHST Sphingobacterium spiritivorum
SPHTH Sphingobacterium thalpophilum
SPMSP Sphingomonas
SPMPARA Sphingomonas parapaucimobilis
SPMPA Sphingomonas paucimobilis
SPISP Spirillum
SPOROLSP Sporolactobacillus
BLAEV Sporolactobacillus laevolacticus
SPOROSSP Sporosarcina
SS Staphylococcus
STAARL Staphylococcus arlettae
SA Staphylococcus aureus
STAAR Staphylococcus auricularis
STACS Staphylococcus capitis
STACC Staphylococcus capitis capitis
STACU Staphylococcus capitis urealyticus
STACAP Staphylococcus caprae
STACAR Staphylococcus carnosus
STACRC Staphylococcus carnosus carnosus
STACUT Staphylococcus carnosus utilis
MACCAS*1 Staphylococcus caseolyticus
STACHR Staphylococcus chromogenes
STACO Staphylococcus cohnii
STASCO Staphylococcus cohnii cohnii
STASUR Staphylococcus cohnii urealyticus
STACON Staphylococcus condimenti
STADELP Staphylococcus delphini
SE Staphylococcus epidermidis
STAEQ Staphylococcus equorum
STAEE Staphylococcus equorum equorum
STAEL Staphylococcus equorum linens
STAFE Staphylococcus felis
STAFL Staphylococcus fleurettii
STAGA Staphylococcus gallinarum
STAHA Staphylococcus haemolyticus
STAHO Staphylococcus hominis
STAHOM Staphylococcus hominis hominis
STANOV Staphylococcus hominis novobiosepticus
STAHYI Staphylococcus hyicus
STACHR*1 Staphylococcus hyicus chromogenes
STAHYI*1 Staphylococcus hyicus hyicus
STAIN Staphylococcus intermedius
STAKLO Staphylococcus kloosii
STALE Staphylococcus lentus
STALU Staphylococcus lugdunensis
STALUTR Staphylococcus lutrae
STAMUS Staphylococcus muscae
STANEP Staphylococcus nepalensis
VEIPA*1 Staphylococcus parvulus
STAPAS Staphylococcus pasteuri
STAPETT Staphylococcus pettenkoferi
STAPIS Staphylococcus piscifermentans
STAPSEU Staphylococcus pseudintermedius
STAVIT*1 Staphylococcus pulvereri
STASL Staphylococcus saccharolyticus
STASA Staphylococcus saprophyticus
STASB Staphylococcus saprophyticus bovis
STASAP Staphylococcus saprophyticus saprophyticus
STASH Staphylococcus schleiferi
STACOA Staphylococcus schleiferi coagulans
STASCH Staphylococcus schleiferi schleiferi
STASC Staphylococcus sciuri
STASCN Staphylococcus sciuri carnaticus
STALE*1 Staphylococcus sciuri lentus
STASRO Staphylococcus sciuri rodentium
STASCU Staphylococcus scuiri scuiri
STASI Staphylococcus simulans
STASU Staphylococcus succinus
STASUC Staphylococcus succinus casei
STASUS Staphylococcus succinus succinus
STAVIT Staphylococcus vitulinus
STAWA Staphylococcus warneri
STAXY Staphylococcus xylosus
CNS Staphylococcus, coagulase negative
CPS Staphylococcus, coagulase positive
STESP Stenotrophomonas
STEMA Stenotrophomonas maltophilia
ROTHMU*1 Stomatococcus mucilaginosus
STRBS Streptobacillus
STRBM Streptobacillus moniliformis
STR Streptococcus
STRVA Streptococcus acidominimus
GRADJ*1 Streptococcus adjacens
GBS Streptococcus agalactiae (group B streptococci)
STRALAC Streptococcus alactolyticus
STRANG*1 Streptococcus anginosis milleri group
STRVN Streptococcus anginosus
STRANG Streptococcus anginosus group
STRAC Streptococcus anginosus-constellatus
STRAUS Streptococcus australis
ENTA*1 Streptococcus avium
STRBOVI Streptococcus bovis group
STRCANI Streptococcus canis
STRGALL*1 Streptococcus caprinus
ENTCA*2 Streptococcus casseliflavus
ENTECECO*1 Streptococcus cecorum
STRVC Streptococcus constellatus
STRCC Streptococcus constellatus constellatus
STRCP Streptococcus constellatus pharyngis
STRCRC Streptococcus criceti
STRCR Streptococcus cristatus
STRDF*1 Streptococcus defectivus
STRDENT Streptococcus dentisani
STRD Streptococcus downei
ENTD*1 Streptococcus durans
STRDYS Streptococcus dysgalactiae
STRDEG Streptococcus dysgalactiae dysgalactiae
STRDEQ Streptococcus dysgalactiae equisimilis
GRANELEG*2 Streptococcus elegans
STRENT Streptococcus entericus
STREG Streptococcus equi
STREQ Streptococcus equi equi
STRZOO Streptococcus equi zooepidemicus
STRDE Streptococcus equinus
ENTFS*1 Streptococcus faecalis
ENTFM*1 Streptococcus faecium
STRF Streptococcus ferus
ENTGA*1 Streptococcus gallinarum
STRGALL Streptococcus gallolyticus
STRGALGAL Streptococcus gallolyticus gallolyticus
STRGALMAC Streptococcus gallolyticus macedonicus
STRGALPAS Streptococcus gallolyticus pasteurianus
LACTGARV*1 Streptococcus garviae
STRVG Streptococcus gordonii
RUMHAN*1 Streptococcus hansenii
STRHYOV Streptococcus hyovaginalis
STRINFA Streptococcus infantarius
STRLUTE*1 Streptococcus infantarius coli
STRINFINF Streptococcus infantarius infantarius
STRINF Streptococcus infantis
STRINI Streptococcus iniae
SVI Streptococcus intermedius
STRALAC*1 Streptococcus intestinalis
LACTLACT*1 Streptococcus lactis
STRLUTE Streptococcus lutetiensis
STRMACA Streptococcus macacae
STRANG*2 Streptococcus milleri group
STRVM Streptococcus mitis
STRMIT Streptococcus mitis group
GEMMO*1 Streptococcus morbillorum
STRVT Streptococcus mutans
STRMUG Streptococcus mutans group
STROLIG Streptococcus oligofermentans
STROR Streptococcus oralis
STROVIS Streptococcus ovis
STRPA Streptococcus parasanguinis
STRPARA Streptococcus parauberis
ATOPAR*2 Streptococcus parvulus
STRGALPAS*1 Streptococcus pasteurianus
STRPER Streptococcus peroris
STRPLUR Streptococcus pluranimalium
SP Streptococcus pneumoniae
STRPORC Streptococcus porcinus
BLAUPROD*3 Streptococcus productus
STRPSEU Streptococcus pseudopneumoniae
STRPSEUD Streptococcus pseudoporcinus
GAS Streptococcus pyogenes (group A streptococci)
STRRT Streptococcus ratti
ENTESACC*1 Streptococcus saccharolyticus
STRVS Streptococcus salivarius
STRSAG Streptococcus salivarius group
STRSLV Streptococcus salivarius salivarius
STRSAL Streptococcus salivarius thermophilus
SVS Streptococcus sanguinis
STRSG Streptococcus sanguinis group
STRINI*1 Streptococcus shiloi
STRSINE Streptococcus sinensis
STRSO Streptococcus sobrinus
STRSUIS Streptococcus suis
STRSAL*1 Streptococcus thermophilus
STRTIGU Streptococcus tigurinus
STRVU Streptococcus uberis
STRVE Streptococcus vestibularis
SC Streptococcus, group C
GDS Streptococcus, group D
GFS Streptococcus, group F
GGS Streptococcus, group G
STRESP Streptomyces
STREALBU Streptomyces albus
STREBIKI Streptomyces bikiniensis
STRECAND Streptomyces candidus
STREGRIS*1 Streptomyces caviscabies
STRECLAV Streptomyces clavuligerus
STREGRIS*3 Streptomyces erumpens
STREFILA Streptomyces filamentosus
STREGRIS Streptomyces griseus
STRELINC Streptomyces lincolnensis
STREFILA*1 Streptomyces roseosporus
STREGRIS*2 Streptomyces setonii
STRESOMA Streptomyces somaliensis
STRESPEC Streptomyces spectabilis
STRETHER Streptomyces thermovulgaris
STREVENE Streptomyces venezuelae
SUCCSP Succinivibrio
SUCCDEXT Succinivibrio dextrinosolvens
SUTTSP Sutterella
SUTTWADS Sutterella wadsworthensis
SUTSP Suttonella
SUTIND Suttonella indologenes
TANNSP Tannerella
TANNFORS Tannerella forsythia
TATMAC*1 Tatlockia macaechernii
TATMIC*1 Tatlockia micdadei
TATSP Tatumella
TATPT Tatumella ptyseos
TETRSP Tetragenococcus
TETRHALO Tetragenococcus halophilus
TETRSOLI Tetragenococcus solitarius
THERSP Thermoactinomyces
TISSP Tissierella
TISPR Tissierella praeacuta
TRASP Trabulsiella
TRAGU Trabulsiella guamensis
TRESP Treponema
TRECA Treponema carateum
TREPALL Treponema pallidum
TROPSP Tropheryma
TROPWHIP Tropheryma whipplei
TRUESP Trueperella
TRUEBERN Trueperella bernardiae
ARCPY Trueperella pyogenes
TSUKSP Tsukamurella
TSUKINCH Tsukamurella inchonensis
TSUKPAUR Tsukamurella paurometabola
TSUKPULM Tsukamurella pulmonis
TSUKSTRA Tsukamurella strandjordii
TSUKTYRO Tsukamurella tyrosinosolvens
TURISP Turicella
TURIOTIT Turicella otitidis
TURICSP Turicibacter
TURISANG Turicibacter sanguinis
URESP Ureaplasma
UREPARV Ureaplasma parvum
UREUR Ureaplasma urealyticum
VAGOSP Vagococcus
VAGOFLUV Vagococcus fluvialis
ENTSP*2 Vancomycin resistant Enterococcus
ENTFS*2 Vancomycin resistant Enterococcus faecalis
ENTFM*2 Vancomycin resistant Enterococcus faecium
VEISP Veillonella
VEIPA*2 Veillonella alcalescens
VEIATYP Veillonella atypica
VEICAVI Veillonella caviae
VEICRIC Veillonella criceti
VEIDISP Veillonella dispar
VEIMONT Veillonella montpellierensis
VEIPA Veillonella parvula
VEIRATT Veillonella ratti
VEIRODE Veillonella rodentium
VIBSP Vibrio
VIBAL Vibrio alginolyticus
VIBHAR*3 Vibrio carchariae
VCUN Vibrio cholerae
VIBCI Vibrio cincinnatiensis
PHODAM*1 Vibrio damsela
CAMFU*1 Vibrio fetus
VIBFL Vibrio fluvialis
VIBFU Vibrio furnissii
VIBHAR Vibrio harveyi
VIBME Vibrio metschnikovii
VIBMI Vibrio mimicus
VIBPA Vibrio parahaemolyticus
CAMSPUT*1 Vibrio sputorum
WOLSU*1 Vibrio succinogenes
VIBHAR*4 Vibrio trachuri
VIBVU Vibrio vulnificus
VIRSP Virgibacillus
VIRPAN Virgibacillus pantothenticus
SVU Viridans group streptococci
WAUTSP Wautersia
CUPRGILA*2 Wautersia gilardii
CUPRPAUC*1 Wautersia paucula
CUPRRESP*2 Wautersia respiaculi
WEESP Weeksella
WEEVI Weeksella virosa
BERZOO*1 Weeksella zoohelcum
WEISSP Weissella
WEISCONF Weissella confusa
WOLSP Wolinella
CAMCU*1 Wolinella curva
CAMRE*1 Wolinella recta
WOLSU Wolinella succinogenes
XANSP Xanthomonas
STEMA*4 Xanthomonas maltophilia
XENSP Xenorhabdus
XENLU*1 Xenorhabdus luminescens
XENNU Xenorhabdus nematophila
YERSP Yersinia
YERAL Yersinia aldovae
YERALEK Yersinia aleksiciae
YERBE Yersinia bercovieri
YEREN Yersinia enterocolitica
YERFR Yersinia frederiksenii
YERIN Yersinia intermedia
YERKR Yersinia kristensenii
YERMO Yersinia mollaretii
YERPE Yersinia pestis
YERPS Yersinia pseudotuberculosis
YERRO Yersinia rohdei
YERRU Yersinia ruckeri
YOKSP Yokenella
YOKRE Yokenella regensburgei
CLOOR*1 Zymobacterium oroticum
nd when referencing the NHSN Organism List. DO NOT interpret the absence of an organism to mean the event is
he NHSN Organism List, please contact us at nhsn@cdc.gov for guidance on appropriate reporting.

SNOMED Preferred Term SNOMED Code

Abiotrophia 115161005
Granulicatella adiacens 113713009
Granulicatella adiacens 113713009
Abiotrophia defectiva 113714003
Granulicatella elegans 115944008
Acholeplasma 84858009
Acholeplasma laidlawii 89082003
Acholeplasma oculi 86450009
Achromobacter 91620006
Achromobacter denitrificans 413414001
Achromobacter piechaudii 413420000
Achromobacter ruhlandii 413421001
Achromobacter xylosoxidans 413424009
Achromobacter xylosoxidans xylosoxidans 423897003
Acidaminococcus 28207003
Acidaminococcus fermentans 63005002
Acid-fast bacillus 243365003
Acidovorax 115153000
Acidovorax delafieldii 113685003
Acidovorax facilis 113686002
Acidovorax temperans 113687006
Acinetobacter 7757008
Acinetobacter baumannii 91288006
Acinetobacter calcoaceticus 82550008
Acinetobacter calcoaceticus-Acinetobacter baumannii complex 113376007
Acinetobacter haemolyticus 77045006
Acinetobacter johnsonii 252000
Acinetobacter junii 13879009
Acinetobacter lwoffi 83088009
Acinetobacter nosocomialis 708859003
Acinetobacter pittii 698244000
Acinetobacter radioresistens 113381003
Acinetobacter schindleri 423732001
Acinetobacter ursingii 424791004
Actinobacillus 85851009
Aggregatibacter actinomycetemcomitans 442680008
Actinobacillus equuli 27165004
Actinobacillus hominis 43638004
Actinobacillus lignieresii 78043002
Actinobacillus suis 112272003
Actinobacillus ureae 1839009
Actinomyces meyeri 3174002
Actinobaculum 114043007
Actinobaculum massiliense 416353004
Actinotignum schaalii 716526006
Actinotignum urinale 427148009
Actinomadura 41571004
Actinomadura latina 113402007
Actinomadura madurae 90285002
Actinomadura pelletieri 65202006
Actinomyces 40560008
Trueperella bernardiae 704975008
Actinomyces bovis 59806008
Actinomyces cardiffensis 427237005
Actinomyces dentalis 426330001
Actinomyces europaeus 113414004
Actinomyces funkei 419012004
Actinomyces georgiae 113415003
Actinomyces gerencseriae 113416002
Actinomyces graevenitzii 113417006
Actinomyces hongkongensis 427269001
Actinomyces israelii 46369004
Actinomyces meyeri 3174002
Actinomyces naeslundii 8940004
Actinomyces nasicola 425520001
Actinomyces neuii 877802991000087109
Actinomyces odontolyticus 12069003
Actinomyces oricola 425488009
Actinomyces oris 447175005
Trueperella pyogenes 258933002
Actinomyces radicidentis 427691003
Actinomyces radingae 113421004
Actinomyces turicensis 113422006
Actinomyces urogenitalis 409827009
Actinomyces viscosus 33529006
Actinotignum 716525005
Actinotignum schaalii 716526006
Actinotignum urinale 427148009
Aerobic bacteria 27471002
Aerococcus 9008009
Aerococcus christensenii 409818008
Aerococcus sanguinicola 427222006
Aerococcus urinae 243230001
Aerococcus urinaeequi 430979003
Aerococcus urinaehominis 409819000
Aerococcus viridans 78803006
Aeromonas 88529008
Aeromonas bestiarum 115027006
Aeromonas caviae 115036005
Aeromonas caviae complex 429561000124107
Aeromonas encheleia 115028001
Aeromonas trota 243316008
Aeromonas eucrenophilia 115030004
Aeromonas hydrophila 85823000
Aeromonas hydrophila complex 429581000124102
Aeromonas jandei 115034008
Aeromonas media 65192005
Aeromonas molluscorum 425862003
Aeromonas popoffii 115035009
Aeromonas caviae 115036005
Aeromonas salmonicida 30334005
Aeromonas schubertii 115039003
Aeromonas simiae 426333004
Aeromonas sobria 43731003
Aeromonas trota 243316008
Aeromonas veronii 9281006
Afipia 114234007
Afipia clevelandensis 114236009
Afipia felis 114237000
Aggregatibacter 441718002
Aggregatibacter actinomycetemcomitans 442680008
Aggregatibacter aphrophilus 442683005
Aggregatibacter segnis 442651004
Agrobacterium 33436009
Rhizobium radiobacter 438107000
Agromyces 427200004
Alcaligenes 68571003
Bordetella bronchiseptica 10620008
Alcaligenes faecalis 25223004
Alcaligenes faecalis 25223004
Achromobacter piechaudii 413420000
Achromobacter xylosoxidans 413424009
Alcaligenes xylosoxidans ss. xylosoxidans 53735001
Alishewanella 416056000
Alishewanella fetalis 417165004
Alistipes 427315001
Alistipes putredinis 426435007
Alloiococcus 396453006
Alloiococcus otitis 396454000
Genus Alloscardovia 429601004
Alloscardovia omnicolens 429317001
Alpha-hemolytic streptococcus 60631002
Alpha-hemolytic Streptococcus species not Streptococcus pneumoniae 713921004
Alysiella 55181006
Alysiella crassa 444924000
Amycolatopsis 115149002
Amycolatopsis orientalis 427705005
Anaerobe 59343002
Anaerobic Gram-negative bacillus 243386003
Anaerobic Gram negative coccobacillus 445380009
Anaerobic Gram-negative coccus 243397003
Anaerobic Gram-positive bacillus 243398008
Anaerobic Gram positive coccobacillus 445381008
Anaerobic Gram-positive coccus 243416009
Anaerobiospirillum 55757006
Anaerobiospirillum succinoproducens 46934005
Anaerobiospirillum thomasii 426729008
Anaerococcus 413518000
Anaerococcus hydrogenalis 413519008
Anaerococcus lactolyticus 413520002
Anaerococcus octavius 413521003
Anaerococcus prevotii 413522005
Anaerococcus tetradius 427220003
Anaerococcus vaginalis 413525007
Anaerorhabdus 54522000
Anaerorhabdus furcosus 24716009
Anaplasma 3351007
Aneurinibacillus 114125006
Aneurinibacillus aneurinilyticus 114126007
Aquabacterium 428044007
Aquabacterium parvum 429109001
Propionibacterium propionicum 427413007
Arcanobacterium 51714009
Trueperella bernardiae 704975008
Arcanobacterium haemolyticum 44723000
Arcanobacterium pluranimalium 428939003
Trueperella pyogenes 258933002
Arcobacter 114206000
Arcobacter butzleri 114207009
Arcobacter nitrofigilis 408629003
Arsenicicoccus 428986004
Arsenicicoccus bolidensis 428067009
Arthrobacter 56214009
Arthrobacter agilis 113432004
Arthrobacter albus 127496003
Arthrobacter arilaitensis 428949000
Arthrobacter astrocyaneus 113433009
Arthrobacter aurescens 113434003
Arthrobacter bergerei 428950000
Arthrobacter chlorophenolicus 428038008
Arthrobacter citreus 44955005
Arthrobacter creatinolyticus 417608004
Arthrobacter crystallopoietes 113435002
Arthrobacter cumminsii 113436001
Arthrobacter flavus 429762004
Arthrobacter gandavensis 428332000
Arthrobacter gangotriensis 429237000
Arthrobacter globiformis 3840003
Arthrobacter histidinolovorans 113437005
Arthrobacter ilicis 48276002
Arthrobacter kerguelensis 429238005
Arthrobacter koreensis 427847001
Arthrobacter luteolus 127497007
Arthrobacter methylotrophus 428270003
Arthrobacter mysorens 113438000
Arthrobacter nasiphocae 428337006
Arthrobacter nicotianae 113439008
Arthrobacter nicotinovorans 113440005
Arthrobacter nitroguajacolicus 429001000
Arthrobacter oryzae 446485009
Arthrobacter oxydans 113441009
Arthrobacter pascens 113442002
Arthrobacter polychromogenes 113443007
Arthrobacter protophormiae 62636004
Arthrobacter psychrolactophilus 428338001
Arthrobacter psychrophenolicus 428048005
Arthrobacter ramosus 113444001
Arthrobacter rhombi 428277000
Arthrobacter roseus 429003002
Arthrobacter russicus 428049002
Arthrobacter scleromae 704978005
Pseudomonas putida 68608003
Arthrobacter sulfonivorans 429111005
Arthrobacter sulfureus 33287009
Arthrobacter uratoxydans 112273008
Arthrobacter ureafaciens 113446004
Corynebacterium variabile 11575001
Arthrobacter viscosus 113447008
Arthrobacter woluwensis 113448003
Atopobium 115136007
Atopobium fossor 428580003
Atopobium minutum 113630002
Atopobium parvulum 113631003
Atopobium rimae 113632005
Atopobium vaginae 417246003
Aureimonas altamirensis 708495002
Aureimonas 708491006
Aureimonas altamirensis 708495002
Microbacterium liquefaciens 114063000
Genus Averyella 421099007
Azorhizobium 429633008
Azorhizobium caulinodans 428325009
Azospirillum 413607005
Azospirillum brasilense 413609008
Bacillus 44762009
Bacillus aeolius 428272006
Bacillus aerius 446486005
Bacillus agaradhaerens 429112003
Brevibacillus agri 114115001
Bacillus alcalophilus 90547001
Bacillus algicola 428278005
Paenibacillus alvei 114088008
Bacillus amyloliquefaciens 82289003
Aneurinibacillus aneurinilyticus 114126007
Bacillus anthracis 21927003
Bacillus aquimaris 423188000
Bacillus arseniciselenatis 429004008
Bacillus asahii 429115001
Bacillus atrophaeus 113450006
Bacillus azotoformans 72997009
Bacillus badius 33457001
Bacillus barbaricus 429638004
Bacillus bataviensis 429246006
Bacillus benzoevorans 39232002
Bacillus boroniphilus 427831003
Brevibacillus brevis 114117009
Bacillus butanolivorans 447039005
Bacillus carboniphilus 113451005
Brevibacillus centrosporus 114118004
Bacillus cereus 84408007
Bacillus cereus group 413618005
Bacillus chittonlyticus 113452003
Bacillus circulans 71812004
Bacillus circulans group 413619002
Bacillus clarkii 113453008
Bacillus clausii 113454002
Bacillus coagulans 81346002
Bacillus cohnii 113455001
Bacillus decisifrondis 445081000
Bacillus decolorationis 429116000
Bacillus dipsosauri 113456000
Bacillus drentensis 428129008
Paenibacillus edaphicus 8501000146105
Bacillus ehimensis 113457009
Bacillus endophyticus 429137008
Bacillus farraginis 429348009
Bacillus fastidiosus 35784003
Bacillus firmus 13430008
Bacillus flexus 113458004
Bacillus fordii 417062004
Bacillus fortis 427859002
Bacillus fumarioli 429118004
Bacillus funiculus 428387004
Brevibacillus agri 114115001
Bacillus galactosidilyticus 427864003
Bacillus gelatini 429034003
Bacillus gibsonii 113460002
Bacillus ginsengi 445082007
Bacillus gornadae 29100001
Bacillus halmapalus 113462005
Bacillus halodenitrificans 113464006
Bacillus halodurans 113465007
Bacillus horikoshii 113467004
Bacillus horti 429138003
Bacillus humi 429139006
Bacillus hwajinpoensis 429035002
Bacillus idriensis 447040007
Bacillus indicus 429145003
Bacillus infantis 432698009
Bacillus infernus 113468009
Bacillus jeotgali 429127003
Bacillus kaustophilus 113469001
Bacillus korlensis 447041006
Bacillus krulwichiae 429126007
Sporolactobacillus laevolacticus 8331000146107
Paenibacillus larvae 114098002
Brevibacillus laterosporus 114121002
Paenibacillus lentimorbus 414989004
Bacillus lentus 3020006
Bacillus licheniformis 74867004
Bacillus luciferensis 429675009
Paenibacillus macerans 114101003
Bacillus macroides 413620008
Bacillus macyae 429206000
Bacillus marinus 87850009
Bacillus marisflavi 424425003
Bacillus massiliensis 445083002
Bacillus megaterium 79109002
Bacillus methanolicus 113471001
Bacillus mojavensis 113472008
Bacillus mucilaginosus 429210002
Bacillus muralis 428576008
Bacillus mycoides 33900003
Bacillus naganoensis 113473003
Bacillus nealsonii 428577004
Bacillus niacini 429747001
Bacillus novalis 429212005
Bacillus odysseyi 428958007
Bacillus okuhidensis 429468004
Bacillus oleronius 113487003
Paenibacillus pabuli 114103000
Bacillus pallidus 84897001
Virgibacillus pantothenticus 114109001
Brevibacillus parabrevis 114122009
Bacillus pasteurii 43131009
Bacillus patagoniensis 428962001
Bacillus pocheonensis 442283002
Paenibacillus polymyxa 114105007
Paenibacillus popilliae 414990008
Bacillus pseudalcaliphilus 113474009
Bacillus pseudofirmus 113475005
Bacillus pseudomycoides 429077002
Bacillus psychrophilus 1810009
Bacillus psychrosaccharolyticus 113476006
Bacillus pulvifaciens 112274002
Bacillus pumilus 16580009
Rummeliibacillus pycnus 450459009
Bacillus salexigens 113478007
Bacillus saliphilus 428588005
Bacillus selenitireducens 428966003
Bacillus shackletonii 429221006
Solibacillus silvestris 429471007
Bacillus simplex 113479004
Bacillus siralis 428972003
Bacillus smithii 84789000
Bacillus soli 428973008
Bacillus sonorensis 429472000
Bacillus sporothermodurans 113480001
Bacillus subterraneus 429486001
Bacillus subtilis 83512007
Bacillus subtilis group 413621007
Bacillus subtilis subspecies inaquosorum 447068006
Bacillus subtilis spizizenii 427760003
Bacillus subtilis subtilis 427764007
Bacillus tequilensis 447069003
Bacillus thermantarcticus 429760007
Bacillus thermoamylovorans 113481002
Bacillus thermocatenulatus 113482009
Bacillus thermocloacae 113483004
Geobacillus thermodenitrificans 433668006
Bacillus thermoglucosidasius 36302007
Paenibacillus thiaminolyticus 114106008
Bacillus thuringiensis 64840009
Bacillus tusciae 34498004
Paenibacillus validus 114107004
Bacillus vallismortis 113484005
Bacillus vedderi 113485006
Bacillus velezensis 429488000
Bacillus vietnamensis 429229008
Chromobacterium violaceum 11042002
Bacillus vireti 429230003
Bacillus weihenstephanensis 413622000
Bacillus species not Bacillus anthracis 413352001
Corynebacterium matruchotii 89922004
Bacteroides 57522007
Prevotella bivia 114131009
Prevotella buccae 114134001
Prevotella buccalis 114135000
Bacteroides caccae 14342006
Pseudoflavonifractor capillosus 447428000
Prevotella buccae 114134001
Clostridium clostridioforme 53220001
Bacteroides coagulans 86193002
Prevotella corporis 114136004
Prevotella denticola 114138003
Prevotella disiens 114139006
Parabacteroides distasonis 447512008
Bacteroides eggerthii 90072006
Porphyromonas endodontalis 2401005
Bacteroides fragilis 55247009
Bacteroides fragilis group 417375007
Anaerorhabdus furcosus 24716009
Porphyromonas gingivalis 114163003
Parabacteroides goldsteinii 5691000146107
Campylobacter gracilis 113528007
Prevotella heparinolytica 114141007
Megamonas hypermegale 9199006
Prevotella intermedia 114142000
Porphyromonas levii 114165005
Porphyromonas macacae 114166006
Bacteroides massiliensis 708567004
Prevotella melaninogenica 114144004
Parabacteroides merdae 447513003
Mitsuokella multacida 55553008
Dichelobacter nodosus 114168007
Bacteroides nordii 10091000087105
Capnocytophaga ochracea 4256006
Prevotella oralis 114146002
Prevotella oris 114147006
Prevotella oulorum 419466004
Bacteroides ovatus 86936008
Prevotella buccae 114134001
Tissierella praeacuta 75376009
Alistipes putredinis 426435007
Bacteroides pyogenes 50504006
Prevotella ruminicola 115949003
Porphyromonas macacae 114166006
Odoribacter splanchnicus 446487001
Bacteroides stercoris 163009
Bacteroides pyogenes 50504006
Bacteroides pyogenes 50504006
Bacteroides thetaiotaomicron 34236001
Bacteroides uniformis 59604009
Campylobacter ureolyticus 450602004
Prevotella veroralis 114152001
Bacteroides vulgatus 52798008
Bacteroides zoogleoformans 425729002
Balneatrix 416418007
Balneatrix alpica 416691007
Bartonella 62496009
Bartonella bacilliformis 243352007
Bartonella clarridgeiae 114223009
Bartonella elizabethae 103513003
Bartonella henselae 103510000
Bartonella quintana 103511001
Bartonella vinsonii 103512008
Vibrio alginolyticus 45749000
Vibrio harveyi 84003007
Vibrio parahaemolyticus 11736008
Vibrio vulnificus 55905000
Bergeyella 115659000
Bergeyella zoohelcum 113718000
Beta-hemolytic streptococcus 53490009
Beta-hemolytic Streptococcus, group A 413643004
Beta-hemolytic streptococcus, non-Group A, non-Group B 406609007
Bifidobacterium 5912005
Bifidobacterium adolescentis 34446001
Bifidobacterium angulatum 33811005
Bifidobacterium dentium 36623007
Bifidobacterium bifidum 27108000
Bifidobacterium breve 35011006
Bifidobacterium catenulatum 11539003
Bifidobacterium dentium 36623007
Bifidobacterium dentium 36623007
Bifidobacterium gallicum 51095003
Bifidobacterium infantis 35848003
Bifidobacterium longum 19464000
Bifidobacterium pseudocatenulatum 19333001
Bifidobacterium scardovii 385502004
Bifidobacterium longum 19464000
Bilophila 114242008
Bilophila wadsworthia 114243003
Blautia 448390002
Blautia coccoides 449531007
Blautia hansenii 449574005
Blautia producta 698205008
Bordetella 46466005
Bordetella avium 43354005
Bordetella bronchiseptica 10620008
Bordetella hinzii 113495004
Bordetella holmesii 116035000
Bordetella parapertussis 26183002
Bordetella pertussis 5247005
Bordetella petrii 416665006
Bordetella trematum 113496003
Borrelia 112277009
Borrelia afzelii 416551001
Borrelia anserina 58382007
Borrelia burgdorferi 76327009
Borrelia caucasica 12544007
Borrelia coriaceae 43459001
Borrelia crocidurae 35660000
Borrelia duttonii 39709002
Borrelia duttonii 39709002
Borrelia garinii 113497007
Borrelia hermsii 62748005
Borrelia hispanica 11787006
Borrelia japonica 113498002
Borrelia lusitaniae 113499005
Borrelia mazzottii 3293005
Borrelia miyamotoi 113500001
Borrelia recurrentis 34726005
Borrelia recurrentis 34726005
Borrelia parkeri 41704008
Borrelia recurrentis 34726005
Borrelia tanukii 113501002
Borrelia theileri 89068003
Borrelia turicatae 24986006
Borrelia valaisiana 113503004
Borrelia venezuelensis 30765003
Brachybacterium 413689006
Brachybacterium muris 413695007
Brachyspira 11572003
Brachyspira aalborgi 48621001
Brachyspira pilosicoli 113517008
Moraxella catarrhalis 24226003
Moraxella cuniculi 46450008
Moraxella ovis 112332009
Brevibacillus 114114002
Brevibacillus agri 114115001
Brevibacillus brevis 114117009
Brevibacillus centrosporus 114118004
Brevibacillus laterosporus 114121002
Brevibacillus parabrevis 114122009
Brevibacterium 3603008
Curtobacterium albidum 114182007
Corynebacterium ammoniagenes 113607008
Brevibacterium casei 6405003
Brevibacterium epidermidis 57301000
Microbacterium imperiale 114203008
Brevibacterium linens 112278004
Brevibacterium luteolum 409826000
Brevibacterium mcbrellneri 431099002
Microbacterium oxydans 414713001
Brevibacterium ravenspurgense 446348002
Brevibacterium sanguinis 431681006
Corynebacterium vitaeruminis 116390001
Brevundimonas 115154006
Brevundimonas diminuta 113689009
Brevundimonas vesicularis 113690000
Brucella 26250004
Brucella abortus 24224000
Brucella canis 38025008
Brucella melitensis 72829003
Brucella neotomae 28461002
Brucella ovis 35049005
Brucella suis 48317004
Budvicia 55851000
Budvicia aquatica 75464008
Bulleidia 413724008
Bulleidia extructa 413725009
Burkholderia 414324002
Burkholderia ambifaria 416467009
Burkholderia anthina 417565005
Burkholderia arboris 445778000
Burkholderia cenocepacia 416941006
Burkholderia cepacia 113669008
Burkholderia cepacia complex 131281002
Burkholderia gladioli 113671008
Burkholderia contaminans 698061006
Burkholderia diffusa 700394003
Burkholderia dolosa 431173006
Paraburkholderia fungorum 417285005
Burkholderia gladioli 113671008
Burkholderia lata 442143003
Burkholderia latens 700393009
Burkholderia mallei 113674000
Burkholderia metallica 700392004
Burkholderia multivorans 113675004
Ralstonia pickettii 114053008
Burkholderia pseudomallei 116399000
Burkholderia pyrrocinia 113677007
Burkholderia stabilis 416616001
Burkholderia thailandensis 113678002
Burkholderia ubonensis 431686001
Burkholderia vietnamiensis 113680008
Buttiauxella 3451006
Buttiauxella agrestis 10969007
Buttiauxella brennerae 416844002
Buttiauxella ferragutiae 417520001
Buttiauxella gaviniae 416852004
Buttiauxella izardii 417035007
Buttiauxella noackiae 114261007
Buttiauxella warmboldiae 416444007
Eubacterium limosum 87632000
Butyricimonas 447185006
Butyricimonas virosa 447458006
Butyrivibrio 20778009
Butyrivibrio fibrisolvens 22176007
Butyrivibrio hungatei 431168000
Calymmatobacterium 86702009
Klebsiella granulomatis 417443008
Campylobacter 35408001
Arcobacter butzleri 114207009
Helicobacter cinaedi 29258005
Campylobacter coli 40614002
Campylobacter concisus 9892000
Campylobacter curvus 116037008
Helicobacter fennelliae 58177005
Campylobacter fetus 84210007
Campylobacter fetus ss. fetus 64589009
Campylobacter jejuni 66543000
Campylobacter fetus ss. venerealis 60817000
Campylobacter gracilis 113528007
Campylobacter helveticus 113522008
Campylobacter hominis 416679003
Campylobacter hyointestinalis 9041007
Campylobacter insulaenigrae 432460004
Campylobacter jejuni 66543000
Campylobacter jejuni ss doylei 113523003
Campylobacter jejuni ss jejuni 113524009
Campylobacter lanienae 432537009
Campylobacter lari 116386003
Campylobacter lari 116386003
Campylobacter mucosalis 87402003
Helicobacter mustelae 10402009
Arcobacter nitrofigilis 408629003
Helicobacter pylori 80774000
Campylobacter rectus 113525005
Campylobacter showae 113526006
Campylobacter sputorum 91524009
Campylobacter sputorum ss. bubulus 19552006
Campylobacter mucosalis 87402003
Campylobacter sputorum ss. sputorum 58928003
Campylobacter upsaliensis 103427005
Campylobacter ureolyticus 450602004
Capnocytophaga 22294008
Capnocytophaga canimorsus 113529004
Capnocytophaga cynodegmi 113530009
Capnocytophaga gingivalis 66463009
Capnocytophaga granulosa 113531008
Capnocytophaga haemolytica 113532001
Capnocytophaga ochracea 4256006
Capnocytophaga sputigena 89892005
carbapenem resistant Acinetobacter 445721008
carbapenem resistant Enterobacter cloacae 714007005
carbapenem resistant Klebsiella pneumoniae 446870005
Cardiobacterium 22292007
Cardiobacterium hominis 7333005
Cardiobacterium valvarum 428148007
Catabacter 444347005
Catabacter hongkongensis 444515001
Catenibacterium 417391005
Catenibacterium mitsuokai 416305003
Catonella 363774008
Catonella morbi 363775009
Cedecea 69937007
Cedecea davisae 30854004
Cedecea lapagei 2345009
Cedecea neteri 83767006
Cellulomonas 114188006
Cellulosimicrobium cellulans 409862004
Cellulomonas hominis 114196001
Cellulomonas humilata 431580002
Cellulosimicrobium 409860007
Cellulosimicrobium cellulans 409862004
Centipeda 90699007
Centipeda periodontii 72002007
Chlamydia 16241000
Chlamydophila pneumoniae 103514009
Chlamydophila psittaci 14590003
Chlamydia trachomatis 63938009
Chlamydophila 372926008
Chlamydophila abortus 413820006
Chlamydophila pneumoniae 103514009
Chlamydophila psittaci 14590003
Chromobacterium 20064000
Chromobacterium violaceum 11042002
Chromobacterium violaceum 11042002
Chryseobacterium 115125000
Chryseobacterium gleum 113548000
Chryseobacterium indologenes 113549008
Chryseomonas 5274006
Chryseomonas luteola 33919008
Chryseomonas luteola 33919008
Citrobacter 75972000
Citrobacter amalonaticus 55744003
Citrobacter braakii 114262000
Citrobacter koseri 114264004
Citrobacter farmeri 114263005
Citrobacter freundii 6265002
Citrobacter gillenii 416990006
Citrobacter koseri 114264004
Citrobacter murliniae 417581000
Citrobacter rodentium 114444007
Citrobacter sedlakii 114265003
Citrobacter werkmanii 114442006
Citrobacter youngae 114443001
Genus Clostridioides 772036006
Clostridioides difficile 5933001
Clostridium 8191000
Clostridium sardiniense 84958008
Clostridium argentiense 113565009
Clostridium baratii 31169007
Clostridium baratii 31169007
Eubacterium barkeri 113728009
Clostridium bartlettii 432470002
Clostridium beijerinckii 9766004
Clostridium bifermentans 8208007
Clostridium bolteae 413879005
Clostridium botulinum 13080008
Clostridium butyricum 19084008
Clostridium cadaveris 16616000
Clostridium carnis 7889007
Clostridium celerecrescens 113566005
Clostridium clostridioforme 53220001
Clostridium cochlearium 76955000
Clostridium cocleatum 24656001
Clostridioides difficile 5933001
Clostridium disporicum 57230009
Clostridium fallax 14264000
Clostridium ghonii 10467001
Clostridium ghonii 10467001
Clostridium glycolicum 112279007
Clostridium haemolyticum 45724004
Clostridium hastiforme 19185007
Clostridium hathewayi 416526002
Clostridium histolyticum 87443003
Clostridium indolis 50884003
Clostridium innocuum 19415008
Clostridium intestinale 113580003
Clostridium irregulare 40423006
Clostridium irregulare 40423006
Clostridium cochlearium 76955000
Clostridium leptum 37059005
Clostridium limosum 48305001
Clostridium malenominatum 12948002
Clostridium novyi 45891006
Flavonifractor plautii 447490001
Clostridium oroticum 29280008
Clostridium baratii 31169007
Clostridium paraputrificum 41966004
Clostridium baratii 31169007
Clostridium perfringens 8331005
Clostridium fallax 14264000
Clostridium butyricum 19084008
Clostridium putrefaciens 22321006
Clostridium ramosum 42706008
Clostridium sardiniense 84958008
Clostridium septicum 33101000
Clostridium sordellii 89313005
Clostridium sphenoides 65891000
Clostridium spiroforme 42936009
Clostridium sporogenes 41468005
Clostridium sporosphaeroides 89918009
Clostridium subterminale 58838009
Clostridium symbiosum 48321006
Clostridium tertium 81909005
Clostridium tetani 30917009
Filifactor villosus 114216008
Clostridium species, not Clostridium perfringens 413881007
Coliform bacteria 77309002
Collinsella 417046005
Collinsella aerofaciens 417399007
Collinsella intestinalis 432267004
Collinsella stercoris 432759008
Comamonas 413887006
Delftia acidovorans 20432002
Comamonas aquatica 413888001
Comamonas kerstersii 413892008
Comamonas terrigena 81829007
Comamonas testosteroni 43721005
Coprococcus 416549000
Coprococcus eutactus 416184008
Corynebacterium 77086004
Corynebacterium accolens 243254006
Corynebacterium afermentans 113608003
Corynebacterium afermentans ss afermentans 113609006
Corynebacterium afermentans ss lipophilum 113610001
Corynebacterium ammoniagenes 113607008
Corynebacterium amycolatum 113611002
Corynebacterium appendicis 423659000
Corynebacterium aquilae 424012003
Corynebacterium argentoratense 417499006
Corynebacterium atypicum 424209005
Corynebacterium aurimucosum 385503009
Corynebacterium auris 413925000
Corynebacterium auriscanis 424389005
Corynebacterium beticola 432270000
Corynebacterium bovis 44885001
Corynebacterium callunae 88866008
Corynebacterium camporealensis 424560007
Corynebacterium capitovis 424721008
Corynebacterium casei 424906005
Corynebacterium caspium 422791000
Corynebacterium ciconiae 424459004
Corynebacterium confusum 417134008
Corynebacterium coyleae 116461008
Corynebacterium cystitidis 50169005
Corynebacterium diphtheriae 5851001
Corynebacterium durum 413926004
Corynebacterium efficiens 423379003
Rhodococcus equi 80771008
Corynebacterium falsenii 116389005
Rhodococcus fascians 28901005
Corynebacterium felinum 423568009
Corynebacterium flavescens 47802009
Corynebacterium striatum 63815007
Corynebacterium freneyi 416914001
Corynebacterium genitalium 243260006
Corynebacterium glaucum 432808003
Corynebacterium glucuronolyticum 413927008
Corynebacterium glutamicum 89651003
Corynebacterium halotolerans 424529007
Arcanobacterium haemolyticum 44723000
Corynebacterium hoagii 54276004
Corynebacterium pseudodiphtheriticum 12050008
Corynebacterium imitans 413928003
Corynebacterium jeikeium 63410006
Corynebacterium kroppenstedtii 363777001
Corynebacterium kutscheri 88575000
Corynebacterium glutamicum 89651003
Corynebacterium lipophiloflavum 416863001
Corynebacterium macginleyi 363772007
Corynebacterium manihot 243261005
Corynebacterium massiliense 446285007
Corynebacterium mastitidis 424709009
Corynebacterium matruchotii 89922004
Corynebacterium mediolanum 243262003
Corynebacterium minutissimum 83594007
Corynebacterium variabile 11575001
Corynebacterium mucifaciens 413929006
Corynebacterium murisepticum 302583000
Corynebacterium kutscheri 88575000
Corynebacterium mycetoides 58879005
Corynebacterium nephridii 243263008
Corynebacterium aurimucosum 385503009
Corynebacterium pseudotuberculosis 55084001
Tsukamurella paurometabola 113510005
Corynebacterium phocae 116462001
Corynebacterium pilosum 81368007
Corynebacterium propinquum 113612009
Corynebacterium pseudodiphtheriticum 12050008
Corynebacterium pseudogenitalium 243264002
Corynebacterium pseudotuberculosis 55084001
Corynebacterium pseudotuberculostearicum 416570006
Trueperella pyogenes 258933002
Corynebacterium pyruviciproducens 450383002
Corynebacterium renale 62000003
Corynebacterium resistens 442804004
Corynebacterium riegelii 131241009
Corynebacterium rubrum 243265001
Corynebacterium glucuronolyticum 413927008
Corynebacterium simulans 416655000
Corynebacterium singulare 422898002
Corynebacterium sphenisci 422705004
Corynebacterium spheniscorum 432362008
Corynebacterium striatum 63815007
Corynebacterium suicordis 423784007
Corynebacterium sundsvallense 425307003
Corynebacterium tenuis 72243003
Corynebacterium terpenotabidum 422496009
Corynebacterium testudinoris 424212008
Corynebacterium thomssenii 416311000
Corynebacterium tuberculostearicum 416356007
Corynebacterium tuscaniense 450409000
Corynebacterium ulcerans 103428000
Corynebacterium urealyticum 113613004
Corynebacterium ureicelerivorans 429443001
Corynebacterium variabile 11575001
Corynebacterium variabile 11575001
Corynebacterium viscosum 243266000
Corynebacterium vitaeruminis 116390001
Corynebacterium vitaeruminis 116390001
Corynebacterium vitaeruminis 116390001
Corynebacterium xerosis 27101006
Corynebacterium species, not Corynebacterium diphtheriae 413931002
Corynebacterium species not Corynebacterium jeikeium 413930001
Toxigenic Corynebacterium 397426001
Coryneform bacteria 116442009
Coxiella 12220009
Coxiella burnetii 22533000
Cronobacter 444664004
Cronobacter dublinensis 445559002
Cronobacter malonaticus 445560007
Cronobacter muytjensii 445561006
Cronobacter sakazakii 445562004
Cronobacter turicensis 445639005
Cryptobacterium 416082009
Cryptobacterium curtum 417538003
Cupriavidus 416121002
Cupriavidus basilensis 425009006
Cupriavidus gilardii 416329005
Cupriavidus metallidurans 423135006
Cupriavidus necator 432717007
Cupriavidus pauculus 429465001
Cupriavidus respiraculi 416495009
Curtobacterium 114181000
Curtobacterium albidum 114182007
Cutibacterium 763051006
Cutibacterium acnes 39473003
Pedobacter heparinus 113554004
Deinococcus 116424004
Delftia 416493002
Delftia acidovorans 20432002
Dermabacter 413976002
Dermabacter hominis 413977006
Dermacoccus 115142006
Dermacoccus nishinomiyaensis 113776005
Dermatophilus 79048004
Dermatophilus congolensis 58141003
Dermatophilus congolensis 58141003
Desulfomonas 37456006
Desulfovibrio 243393004
Desulfovibrio desulfuricans 243394005
Desulfovibrio piger 431119000
Desulfovibrio vulgaris 431923009
Dialister 114169004
Dialister micraerophilus 446809007
Dialister pneumosintes 114170003
Dichelobacter 114167002
Dichelobacter nodosus 114168007
Dietzia 409831003
Dietzia cinnamea 443020004
Diphtheroids 54642001
Aerobic diphtheroids 44661006
Anaerobic diphtheroids 26481006
Dolosicoccus 416690008
Dolosicoccus paucivorans 416464002
Dolosigranulum 363764005
Dolosigranulum pigrum 363765006
Dorea 432232004
Dorea formicigenerans 433913005
Dorea longicatena 433914004
Dyella 713873002
Dysgonomonas 409809006
Dysgonomonas capnocytophagoides 409811002
Dysgonomonas gadei 409812009
Edwardsiella 14566004
Edwardsiella tarda 74672006
Edwardsiella hoshinae 4280005
Edwardsiella ictaluri 68227003
Edwardsiella tarda 74672006
Eggerthella 414075007
Eggerthella lenta 414077004
Eggerthella sinesis 414078009
Eggerthia 7991000146108
Eggerthia catenaformis 59836004
Ehrlichia 27334000
Eikenella 4346009
Eikenella corrodens 52591004
Elizabethkingia 426244005
Elizabethkingia meningoseptica 425774009
Empedobacter 115126004
Empedobacter brevis 113629007
Enterobacter 58683007
Klebsiella aerogenes 62592009
Pantoea agglomerans 115015008
Pantoea agglomerans 115015008
Enterobacter amnigenus 84221003
Enterobacter asburiae 33115003
Enterobacter cancerogenus 114451003
Enterobacter cloacae 14385002
Enterobacter cloacae complex 414102007
Enterobacter cloacae subspecies dissolvens 56813009
Kosakonia cowanii 416229008
Enterobacter cloacae subspecies dissolvens 56813009
Pluralibacter gergoviae 716346000
Hafnia alvei 76694001
Enterobacter hormaechei 114454006
Kluyvera intermedia 431977008
Enterobacter kobei 114456008
Serratia liquefaciens 23787004
Enterobacter ludwigii 432763001
Lelliottia nimipressuralis 29511003
Pluralibacter pyrinus 114455007
Enterobacteriaceae 106544002
Genus Enterococcus 2785000
Enterococcus asini 425342004
Enterococcus avium 87875008
Enterococcus canis 424191009
Enterococcus casseliflavus 30949009
Enterococcus cecorum 113722005
Enterococcus dispar 113724006
Enterococcus durans 46464008
Enterococcus faecalis 78065002
Enterococcus faecium 90272000
Enterococcus casseliflavus 30949009
Enterococcus gallinarum 53233007
Enterococcus gilvus 416934000
Enterococcus haemoperoxidus 423614008
Enterococcus hermanniensis 422482003
Enterococcus hirae 73852008
Enterococcus italicus 422707007
Enterococcus malodoratus 10262005
Enterococcus moraviensis 424862009
Enterococcus mundtii 38004008
Enterococcus pallens 417099004
Enterococcus phoeniculicola 432791009
Enterococcus pseudoavium 103436009
Enterococcus raffinosus 103437000
Enterococcus ratti 431989005
Enterococcus saccharolyticus 103438005
Enterococcus italicus 422707007
Lactococcus garvieae 27716002
Tetragenococcus solitarius 431990001
Enterococcus sulfureus 113726008
Enterococcus villorum 424710004
EHEC, serotype O157:H7 103429008
Enteropathogenic Escherichia coli 83285000
Erwinia 38865008
Pantoea ananatis 115014007
Enterobacter cancerogenus 114451003
Enterobacter cloacae subspecies dissolvens 56813009
Pantoea agglomerans 115015008
Lelliottia nimipressuralis 29511003
Erwinia persicina 431272005
Pantoea ananatis 115014007
Erysipelothrix 88266001
Erysipelothrix inopinata 431389000
Erysipelothrix rhusiopathiae 48666005
Erysipelothrix rhusiopathiae 48666005
Erysipelothrix tonsillarum 12575003
Escherichia 64735005
Leclercia adecarboxylata 57459006
Escherichia albertii 419388003
Escherichia coli 112283007
Escherichia fergusonii 72461005
Escherichia hermannii 85786000
Escherichia vulneris 53013003
Eubacterium 5615005
Collinsella aerofaciens 417399007
Pseudoramibacter alactolyticus 113828002
Eubacterium barkeri 113728009
Eubacterium biforme 20347007
Eubacterium brachy 12734008
Eubacterium budayi 29984006
Eubacterium budayi 29984006
Eubacterium callanderi 113730006
Eubacterium combesii 13257008
Eubacterium contortum 59949005
Eubacterium cylindroides 20804002
Eubacterium dolichum 82964000
Eubacterium eligens 66412009
Slackia exigua 434236002
Atopobium fossor 428580003
Eubacterium hadrum 4696003
Eubacterium hallii 58040000
Eubacterium infirmum 113733008
Eggerthella lenta 414077004
Eubacterium limosum 87632000
Eubacterium minutum 113734002
Eubacterium moniliforme 46192006
Eubacterium nitrogenes 22777005
Eubacterium nodatum 48215005
Flavonifractor plautii 447490001
Eubacterium ramulus 8315002
Eubacterium rectale 69189003
Eubacterium saburreum 41543005
Eubacterium saphenum 113735001
Eubacterium siraeum 70459007
Eubacterium sulci 432171006
Eubacterium tenue 29575000
Mogibacterium timidum 417280000
Eubacterium ventriosum 20578007
Eubacterium yurii 4791002
Ewingella 3878001
Ewingella americana 19027003
Exiguobacterium 114178005
Exiguobacterium acetylicum 114179002
ESBL Citrobacter freundii 721909006
ESBL Enterobacter cloacae 721910001
ESBL Escherichia coli 409800005
Extended spectrum beta-lactamase producing Klebsiella oxytoca 713928005
ESBL Klebsiella pneumoniae 409801009
ESBL Proteus mirabilis 713929002
ESBL Shigella sonnei 721911002
Facklamia 414180001
Facklamia hominis 414181002
Facklamia ignava 417537008
Facklamia languida 416607000
Facklamia sourekii 416870001
Facklamia tabacinasalis 432914009
Faecalibacterium 432915005
Faecalibacterium prausnitzii 433993006
Mobiluncus mulieris 13716002
Mobiluncus curtisii 30224004
Genus Filifactor 115663007
Filifactor alocis 431367004
Filifactor villosus 114216008
Finegoldia 417248002
Finegoldia magna 417469002
Pseudomonas oryzihabitans 113931000
Flavobacterium 18986002
Microbacterium arborescens 414699006
Chryseobacterium indologenes 113549008
Empedobacter brevis 113629007
Flavobacterium devorans 14795006
Chryseobacterium gleum 113548000
Pedobacter heparinus 113554004
Chryseobacterium indologenes 113549008
Microbacterium maritypicum 414710003
Microbacterium maritypicum 414710003
Elizabethkingia meningoseptica 425774009
Flavobacterium mitzutaii 113749005
Sphingobacterium multivorum 51595006
Myroides odoratus 113558001
Sphingomonas paucimobilis 243350004
Sphingobacterium spiritivorum 61675006
Sphingobacterium thalpophilum 113954009
Sphingobacterium spiritivorum 61675006
Flavonifractor 447035004
Flavonifractor plautii 447490001
Fluoribacter 115165001
Legionella bozemanae 450611004
Legionella dumoffii 113720002
Legionella gormanii 113721003
Francisella 50255000
Francisella tularensis 51526001
Fusobacterium 33562003
Filifactor alocis 431367004
Fusobacterium canifelinum 432342000
Fusobacterium equinum 432343005
Fusobacterium gonidiaformans 84644009
Fusobacterium mortiferum 112330001
Fusobacterium naviforme 33311002
Fusobacterium necrogenes 17304009
Fusobacterium necrophorum 27274008
Fusobacterium necrophorum ss fundiliforme 113757008
Fusobacterium necrophorum ss necrophorum 113758003
Fusobacterium nucleatum 32763000
Fusobacterium nucleatum ss fusiforme 113760001
Fusobacterium nucleatum ss nucleatum 113761002
Fusobacterium nucleatum ss polymorphum 113762009
Fusobacterium periodonticum 69601004
Flavonifractor plautii 447490001
Fusobacterium nucleatum ss polymorphum 113762009
Faecalibacterium prausnitzii 433993006
Fusobacterium russii 85226004
Eubacterium sulci 432171006
Fusobacterium ulcerans 113764005
Fusobacterium varium 1972005
Gallicola 432277002
Gallicola barnesae 433725004
gamma-hemolytic streptococcus 22339002
Gardnerella 69256005
Gardnerella vaginalis 64071004
Gemella 11590002
Gemella bergeriae 131310006
Gemella haemolysans 37511002
Gemella morbillorum 113765006
Gemella sanguinis 125038007
Geobacillus 432566007
Geobacillus stearothermophilus 433616004
Geobacillus thermodenitrificans 433668006
Geobacillus thermoglucosidasius 434278008
Globicatella 414344008
Globicatella sanguinis 414345009
Globicatella sulfidifaciens 414347001
Gordonia 115143001
Gordonia bronchialis 113646005
Gordonia otitidis 443659007
Gordonia polyisoprenivorans 420096009
Gordonia rubripertincta 113647001
Gordonia rubripertincta 113647001
Gordonia sputi 113648006
Gordonia terrae 113649003
Gram-negative bacillus 87172008
Fermentative Gram-negative bacillus 243312005
Non-fermentative Gram-negative bacillus 243328000
Gram-negative coccobacillus 53932007
Gram-negative coccus 18383003
Gram-negative diplococcus 83410001
Gram-negative pleomorphic bacillus 73460001
Gram-positive bacillus 83514008
Gram positive coccobacillus 49682003
Gram-positive coccus 59206002
Gram-positive diplococcus 11471007
Gram-variable bacillus 243288000
Gram-variable coccobacillus 301782009
Gram-variable coccus 301781002
Granulicatella 409814005
Granulicatella adiacens 113713009
Granulicatella elegans 115944008
Grimontia 431444000
Grimontia hollisae 433669003
Haemophilus 71268004
Aggregatibacter actinomycetemcomitans 442680008
Haemophilus aegyptius 27784005
Aggregatibacter aphrophilus 442683005
Haemophilus haemoglobinophilus 72339004
Haemophilus ducreyi 64889004
Haemophilus haemoglobinophilus 72339004
Haemophilus haemolyticus 54950008
Haemophilus influenzae 44470000
Haemophilus parahaemolyticus 89800007
Haemophilus parainfluenzae 51593004
Haemophilus pittmaniae 432919004
Aggregatibacter segnis 442651004
Hafnia 20523001
Hafnia alvei 76694001
Halomonas 114046004
Halomonas venusta 417325005
Helcococcus 127526006
Helcococcus kunzii 127527002
Helcococcus sueciensis 431369001
Helicobacter 19454009
Helicobacter acinonychis 60081005
Helicobacter acinonychis 60081005
Helicobacter aurati 431287000
Helicobacter bilis 113537007
Helicobacter bizzozeroni 113538002
Helicobacter canadensis 416087003
Helicobacter canis 113539005
Helicobacter cholecystus 113540007
Helicobacter cinaedi 29258005
Helicobacter felis 68625001
Helicobacter fennelliae 58177005
Helicobacter ganmani 431448002
Helicobacter hepaticus 113541006
Helicobacter mesocricetorum 431449005
Helicobacter muridarum 78504006
Helicobacter mustelae 10402009
Helicobacter pylori 80774000
Helicobacter pametensis 432972000
Helicobacter pullorum 113543009
Helicobacter pylori 80774000
Helicobacter rappini 49037001
Helicobacter rodentium 113544003
Helicobacter salomonis 113545002
Helicobacter trogontum 113546001
Helicobacter typhlonius 432973005
Bordetella pertussis 5247005
Herbaspirillum 116406001
Holdemania 416161001
Holdemania filiformis 417221003
Ignavigranum 432322009
Ignavigranum ruoffiae 434190004
Inquilinus 428734002
Inquilinus limosus 427977006
Janibacter 409828004
Janibacter hoylei 698246003
Jonesia 115138008
Jonesia denitrificans 113769000
Kerstersia 417655009
Kerstersia gyiorum 417628000
Kingella 32017003
Kingella denitrificans 78676004
Suttonella indologenes 116392009
Kingella kingae 90422000
Kingella oralis 129080004
Kingella potus 423288009
Klebsiella 75032006
Klebsiella aerogenes 62592009
Klebsiella granulomatis 417443008
Raoultella ornithinolytica 416832000
Klebsiella oxytoca 40886007
Klebsiella pneumoniae ss. ozaenae 65186004
Raoultella planticola 416264004
Klebsiella pneumoniae 56415008
Klebsiella pneumoniae ss. ozaenae 65186004
Klebsiella pneumoniae ss. pneumoniae 18400002
Klebsiella pneumoniae ss. rhinoscleromatis 17688001
Klebsiella pneumoniae ss. rhinoscleromatis 17688001
Klebsiella singaporensis 433047006
Raoultella terrigena 416096003
Raoultella planticola 416264004
Klebsiella variicola 431976004
Kluyvera 61161003
Kluyvera ascorbata 58493008
Kluyvera cryocrescens 32547006
Kluyvera georgiana 416156003
Kluyvera intermedia 431977008
Kocuria 414328004
Kocuria rosea 113773002
Kocuria kristinae 113772007
Kocuria rosea 113773002
Kocuria varians 113774008
Kosakonia 8031000146105
Kosakonia cowanii 416229008
Yokenella regensburgei 89477001
Kroppenstedtia 699369007
Kroppenstedtia eburnea 699374004
Kurthia 69512006
Kurthia bessoni 243283009
Kytococcus 115141004
Kytococcus sedentarius 113775009
Genus Lachnoanaerobaculum 705168000
Lachnoanaerobaculum orale 705171008
Lactobacillus 43690008
Lactobacillus acidophilus 45707005
Lactobacillus amylovorus 9534006
Lactobacillus antri 431689008
Lactobacillus plantarum 14332009
Lactobacillus brevis 90396007
Lactobacillus buchneri 49217007
Lactobacillus casei 1017006
Eggerthia catenaformis 59836004
Lactobacillus fermentum 65506008
Weissella confusa 113639001
Lactobacillus crispatus 89237007
Lactobacillus delbrueckii 5197002
Lactobacillus fermentum 65506008
Lactobacillus gasseri 71158000
Lactobacillus gastricus 431787001
Lactobacillus iners 431967006
Lactobacillus jensenii 65904004
Lactobacillus johnsonii 113786006
Lactobacillus kalixensis 432574008
Atopobium minutum 113630002
Lactobacillus oris 87480009
Lactobacillus paracasei 113792000
Lactobacillus plantarum 14332009
Lactobacillus reuteri 86271002
Lactobacillus rhamnosus 113798001
Atopobium rimae 113632005
Lactobacillus sakei 39861009
Lactobacillus salivarius 37809002
Lactobacillus ultunensis 432284005
Lactobacillus vaginalis 113803005
Lactobacillus vitulinus 10276006
Lactococcus 9879003
Lactococcus garvieae 27716002
Lactococcus lactis 62079003
Leclercia 43590002
Leclercia adecarboxylata 57459006
Legionella 7527002
Legionella adelaidensis 103447002
Legionella anisa 18214000
Legionella beliardensis 432714000
Legionella birminghamensis 22592008
Legionella bozemanae 450611004
Legionella brunensis 103448007
Legionella busanensis 433050009
Legionella cherrii 52462004
Legionella cincinnatiensis 58923007
Legionella drancourtii 432325006
Legionella drozanskii 432712001
Legionella dumoffii 113720002
Legionella erythra 28109006
Legionella fairfieldensis 103449004
Legionella fallonii 432453005
Legionella feeleii 17083009
Legionella geestiana 103450004
Legionella gormanii 113721003
Legionella hackeliae 58939000
Legionella israelensis 3128001
Legionella janestowniensis 89709001
Legionella jordanis 39739007
Legionella lansingensis 103452007
Legionella londiniensis 103453002
Legionella longbeachae 89605004
Legionella lytica 113806002
Legionella maceachernii 116379006
Legionella micdadei 116380009
Legionella moravica 103454008
Legionella nautarum 103455009
Legionella oakridgensis 638008
Legionella parisiensis 38322001
Legionella micdadei 116380009
Legionella pneumophila 80897008
Legionella quateirensis 113807006
Legionella quinlivanii 103459003
Legionella rowbothamii 432713006
Legionella rubrilucens 17298000
Legionella sainthelens 87271006
Legionella santicrucis 72814000
Legionella shakespearei 103460008
Legionella spiritensis 64930007
Legionella steigerwaltii 14121003
Legionella taurinensis 433048001
Legionella tucsonensis 103461007
Legionella wadsworthii 8147000
Legionella waltersii 113808001
Legionella worsleiensis 103462000
Leifsonia 414590004
Leifsonia aquatica 414591000
Leifsonia xyli 414596005
Lelliottia 717652001
Enterobacter amnigenus 84221003
Lelliottia nimipressuralis 29511003
Leminorella 31556000
Leminorella grimontii 74357002
Leminorella richardii 45354007
Leptospira 26764003
Leptospira interrogans 116401006
Leptotrichia 52505003
Eubacterium saburreum 41543005
Leptotrichia buccalis 85744006
Leptotrichia goodfellowii 433192002
Leptotrichia trevisanii 431794003
Leptotrichia wadei 433194001
Leuconostoc 43639007
Leuconostoc citreum 113821008
Leuconostoc citreum 113821008
Leuconostoc lactis 70285009
Leuconostoc mesenteroides 71403009
Leuconostoc pseudomesenteroides 243235006
Citrobacter amalonaticus 55744003
Citrobacter koseri 114264004
Listeria 23566007
Jonesia denitrificans 113769000
Listeria grayi 67816007
Listeria innocua 48331004
Listeria ivanovii 55032007
Listeria monocytogenes 36094007
Listeria seeligeri 43091008
Listeria welshimeri 80757000
Listonella 115043004
Vibrio harveyi 84003007
Macrococcus 414633005
Macrococcus bovicus 414634004
Macrococcus carouselicus 414636002
Macrococcus caseolyticus 416613009
Macrococcus equipercicus 414637006
Mannheimia 128381001
Mannheimia haemolytica 128385005
Massilia 409856009
Massilia timonae 409858005
Megamonas 44152007
Megamonas hypermegale 9199006
Megamonas hypermegale 9199006
Megasphaera 48889004
Megasphaera elsdenii 26044001
methicillin resistant Staphylococcus aureus 115329001
Methylobacterium 38395008
Methylobacterium mesophilicum 103486003
Methylobacterium zatmanii 103491002
Microbacterium 114199008
Microbacterium arborescens 414699006
Microbacterium hydrocarbonoxydans 414707005
Microbacterium imperiale 114203008
Microbacterium lacticum 114204002
Microbacterium liquefaciens 114063000
Microbacterium maritypicum 414710003
Microbacterium oxydans 414713001
Microbacterium paraoxydans 414714007
Microbacterium resistens 414716009
Micrococcus 52864008
Micrococcus antarcticus 416555005
Micrococcus luteus 48299003
Nesterenkonia halobia 113770004
Kocuria kristinae 113772007
Micrococcus luteus 48299003
Micrococcus lylae 61376003
Micrococcus luteus 48299003
Peptococcus niger 112344007
Micrococcus nishinomiyaensis 67084000
Kocuria rosea 113773002
Kytococcus sedentarius 113775009
Micromonospora 416958001
Micromonospora chalcea 430840008
Nocardia brevicatena 70366009
Mitsuokella 24231001
Prevotella dentalis 114137008
Mitsuokella multacida 55553008
Mobiluncus 8984004
Mobiluncus curtisii 30224004
Mobiluncus mulieris 13716002
Moellerella 71655003
Moellerella wisconsensis 37107002
Mogibacterium 416887004
Mogibacterium diversum 429898003
Mogibacterium neglectum 429899006
Mogibacterium timidum 417280000
Mogibacterium vescum 416225002
Moraxella 36361003
Riemerella anatipestifer 113658005
Moraxella atlantae 47491001
Moraxella boevrei 113832008
Moraxella bovis 19425003
Moraxella canis 113833003
Moraxella caprae 113834009
Moraxella catarrhalis 24226003
Moraxella cuniculi 46450008
Kingella kingae 90422000
Kingella kingae 90422000
Moraxella lacunata 84066001
Moraxella lincolnii 113836006
Moraxella lacunata 84066001
Moraxella nonliquefaciens 46455003
Moraxella oblonga 430486003
Moraxella osloensis 72401008
Moraxella ovis 112332009
Psychrobacter phenylpyruvicus 113941002
Oligella urethralis 90341001
Morganella 50713005
Morganella morganii 243301005
Morganella morganii subsp sibonii 243303008
multidrug resistant Achromobacter xylosoxidans 707330008
multidrug resistant Acinetobacter 446157004
multidrug resistant Enterobacter asburiae 714316001
multidrug resistant Klebsiella pneumoniae 714315002
multidrug resistant Morganella morganii 707293009
multidrug resistant Pseudomonas aeruginosa 710332005
multiple drug-resistant Enterobacter cloacae 714317005
multiple drug-resistant Proteus mirabilis 714314003
Mycobacterium 243368001
Mycobacterium abscessus 113838007
Mycobacterium africanum 51320008
Mycobacterium agri 29111009
Mycobacterium aichiense 66940008
Mycobacterium alvei 113839004
Mycobacterium gordonae 24871004
Mycobacterium asiaticum 44760001
Mycobacterium aurum 48134004
Mycobacterium austroafricanum 27365009
Mycobacterium avium 83723009
Mycobacterium, avium-intracellulare group 58503001
Mycobacterium marinum 58869008
Mycobacterium boenickei 430995003
Mycobacterium bohemicum 430996002
Mycobacterium bovis 27142009
Mycobacterium branderi 113843000
Mycobacterium brisbanense 430998001
Mycobacterium brumae 113844006
Mycobacterium intracellulare 83841006
Mycobacterium canariasense 432476008
Mycobacterium canetti 414789006
Mycobacterium caprae 430579009
Mycobacterium celatum 103475000
Mycobacterium chelonae 243377008
Mycobacterium chesapeaki 430667000
Mycobacterium chitae 89896008
Mycobacterium chlorophenolicus chlorophenolicum 713611009
Mycobacterium chubuense 20498000
Mycobacterium confluentis 113845007
Mycobacterium conspicuum 113846008
Mycobacterium cookii 113847004
Mycobacterium cosmeticum 430580007
Mycobacterium diernhoferi 6199007
Mycobacterium doricum 430581006
Mycobacterium duvalii 66838002
Mycobacterium elephantis 385509008
Mycobacterium fallax 9939008
Mycobacterium farcinogenes 61708000
Mycobacterium flavescens 5885000
Mycobacterium fortuitum 243378003
Mycobacterium fortuitum complex 103474001
Mycobacterium fortuitum complex 103474001
Mycobacterium frederiksbergense 429917008
Mycobacterium gadium 74917007
Mycobacterium gastri 70463000
Mycobacterium genavense 103476004
Mycobacterium fortuitum 243378003
Mycobacterium gilvum 24618002
Mycobacterium goodii 127522008
Mycobacterium gordonae 24871004
Mycobacterium simiae 84180005
Mycobacterium haemophilum 21996001
Mycobacterium hassiacum 113848009
Mycobacterium heckeshornense 429919006
Mycobacterium heidelbergense 429920000
Mycobacterium hiberniae 113849001
Mycobacterium hodleri 113850001
Mycobacterium holsaticum 429946001
Mycobacterium houstonense 429947005
Mycobacterium immunogenum 428319005
Mycobacterium interjectum 113851002
Mycobacterium intermedium 113852009
Mycobacterium intracellulare 83841006
Mycobacterium paratuberculosis 74028009
Mycobacterium kansasii 1507005
Mycobacterium komossence 36249008
Mycobacterium kubicae 427768005
Mycobacterium lacticola 429948000
Mycobacterium lacus 430014001
Mycobacterium lentiflavum 113853004
Mycobacterium leprae 58242002
Mycobacterium kansasii 1507005
Mycobacterium madagascariense 113854005
Mycobacterium mageritense 385507005
Mycobacterium malmoense 73576007
Mycobacterium marinum 58869008
Mycobacterium microti 70801007
Mycobacterium fortuitum 243378003
Mycobacterium montefiorense 430740001
Mycobacterium moriokaense 9679001
Mycobacterium mucogenicum 113856007
Mycobacterium murale 385506001
Mycobacterium neoaurum 51459000
Mycobacterium neworleansense 430911006
Mycobacterium nonchromogenicum 21433000
Mycobacterium novocastrense 113857003
Mycobacterium obuense 41304005
Mycobacterium palustre 430912004
Mycobacterium parafortuitum 909007
Mycobacterium parascrofulaceum 428856007
Mycobacterium paratuberculosis 74028009
Mycobacterium parmense 430913009
Mycobacterium peregrinum 113859000
Mycobacterium phlei 78112006
Mycobacterium phocaicum 432888001
Mycobacterium pinnipedii 430914003
Mycobacterium marinum 58869008
Mycobacterium porcinum 91336002
Mycobacterium psychrotolerans 429901002
Mycobacterium rhodesiae 72130005
Mycobacterium scrofulaceum 20141004
Mycobacterium septicum 385508000
Mycobacterium sherrisii 429904005
Mycobacterium shimoidei 79817008
Mycobacterium shottsii 430487007
Mycobacterium simiae 84180005
Mycobacterium smegmatis 53114006
Mycobacterium sphagni 78444002
Mycobacterium szulgai 65613000
Mycobacterium terrae 45662006
Mycobacterium terrae complex 428765006
Mycobacterium thermoresistibile 20973006
Mycobacterium tokaiense 72477006
Mycobacterium triplex 113860005
Mycobacterium triviale 40333002
Mycobacterium tuberculosis 113861009
Mycobacterium tuberculosis complex 113858008
Mycobacterium tusciae 430489005
Mycobacterium ulcerans 40713003
Mycobacterium vaccae 54925005
Mycobacterium vanbaalenii 430490001
Mycobacterium wolinskyi 127523003
Mycobacterium xenopi 58663006
Mycobacterium, avium-intracellulare group 58503001
Genus Mycoplasma 78981005
Mycoplasma buccale 112338008
Mycoplasma faucium 76010005
Mycoplasma fermentans 88263009
Mycoplasma genitalium 5056007
Mycoplasma hominis 1290001
Mycoplasma fermentans 88263009
Mycoplasma lipophilum 11412008
Mycoplasma orale 46705005
Mycoplasma penetrans 113884002
Mycoplasma pirum 81314002
Mycoplasma pneumoniae 58720004
Mycoplasma primatum 112337003
Mycoplasma salivarium 2654003
Mycoplasma spermatophilum 113890003
Myroides 115127008
Myroides odoratus 113558001
Neisseria 59083001
Neisseria canis 54978009
Moraxella catarrhalis 24226003
Neisseria cinerea 69312007
Moraxella cuniculi 46450008
Neisseria dentiae 113896009
Neisseria elongata 12638001
Neisseria elongata ss. elongata 54127003
Neisseria elongata ss. glycolytica 35693009
Neisseria elongata ss nitroreducens 113895008
Neisseria flavescens 75566007
Neisseria gonorrhoeae 68704007
Neisseria iguanae 113897000
Neisseria lactamica 54915000
Neisseria macacae 112341004
Neisseria meningitidis 17872004
Neisseria mucosa 81795000
Neisseria oralis 723475000
Moraxella ovis 112332009
Neisseria weaveri 113894007
Neisseria perflava 116412006
Neisseria polysaccharea 66768001
Neisseria sicca 49074002
Neisseria subflava 77700001
Neisseria weaveri 113894007
Neorickettsia 58579003
Neorickettsia sennetsu 423477000
Nesterenkonia 414331003
Nesterenkonia halobia 113770004
Nocardia 59674005
Nocardia abscessus 414863003
Nocardia africana 417342004
Nocardia anaemiae 472230801000087102
Nocardia aobensis 444683006
Nocardia araoensis 430602008
Nocardia arthritidis 427275005
Nocardia asiatica 426054003
Nocardia asteroides 30092002
Nocardia asteroides complex 414864009
Nocardia beijingensis 430848001
Nocardia brasiliensis 58970008
Nocardia brevicatena 70366009
Nocardia carnea 61208001
Nocardia otitidis caviarum 63087008
Nocardia cyriacigeorgica 414866006
Nocardia elegans 418717009
Nocardia farcinica 85516007
Nocardia higoensis 430654003
Nocardia inohanensis 430770006
Nocardia kruczakiae 450468006
Nocardia mexicana 855085291000087109
Nocardia niigatensis 430772003
Nocardia nova 37621001
Amycolatopsis orientalis 427705005
Nocardia otitidis caviarum 63087008
Nocardia otitidis caviarum 63087008
Nocardia paucivorans 414867002
Nocardia pneumoniae 431063007
Nocardia pseudobrasiliensis 414868007
Nocardia sienata 430672009
Nocardia testacea 430588000
Nocardia transvalensis 80379008
Nocardia veterana 414869004
Nocardia yamanashiensis 430661004
Nocardiopsis 23593005
Nocardiopsis dassonvillei 15526005
Nocardiopsis synnemataformans 416314008
Nutritionally variant streptococci 698214003
Obesumbacterium 50732004
Obesumbacterium proteus 28501001
Ochrobactrum 116423005
Ochrobactrum anthropi 116490002
Ochrobactrum intermedium 414926008
Odoribacter 418523002
Odoribacter splanchnicus 446487001
Oerskovia 81194007
Oligella 112343001
Oligella ureolytica 11309009
Oligella urethralis 90341001
Orientia 114232006
Orientia tsutsugamushi 114233001
Paenibacillus 114086007
Paenibacillus agaridevorans 429907003
Paenibacillus alvei 114088008
Paenibacillus edaphicus 8501000146105
Paenibacillus validus 114107004
Paenibacillus larvae 114098002
Paenibacillus lentimorbus 414989004
Paenibacillus macerans 114101003
Paenibacillus pabuli 114103000
Paenibacillus polymyxa 114105007
Paenibacillus popilliae 414990008
Paenibacillus provencensis 438962008
Paenibacillus thiaminolyticus 114106008
Paenibacillus urinalis 445240003
Paenibacillus validus 114107004
Pandoraea 414998001
Pandoraea apista 414999009
Pandoraea norimbergensis 415000009
Pandoraea pnomenusa 415001008
Pandoraea pulmonicola 415002001
Pandoraea sputorum 415004000
Pantoea 115013001
Pantoea agglomerans 115015008
Pantoea ananatis 115014007
Pantoea ananatis 115014007
Pantoea dispersa 115017000
Parabacteroides 447036003
Parabacteroides distasonis 447512008
Parabacteroides goldsteinii 5691000146107
Parabacteroides merdae 447513003
Paraburkholderia 723767007
Paraburkholderia fungorum 417285005
Paracoccus 415013003
Paracoccus yeei 415033004
Parascardovia 431018006
Parascardovia denticolens 433344009
Parvimonas 430005006
Parvimonas micra 434293007
Pasteurella 87579009
Pasteurella aerogenes 87075007
Pasteurella bettyae 113902004
Pasteurella caballi 113903009
Pasteurella canis 7784009
Pasteurella dagmatis 80948000
Mannheimia haemolytica 128385005
Pasteurella multocida 10879005
Pasteurella multocida ss. gallicida 1743002
Pasteurella multocida ss. multocida 71068007
Pasteurella multocida ss. septica 14298009
Pasteurella pneumotropica 32562008
Pasteurella stomatis 46827009
Actinobacillus ureae 1839009
Patulibacter 734237002
Genus Pectobacterium 422013009
Pediococcus 243236007
Pediococcus acidilactici 243237003
Pediococcus pentosaceus 243242006
Aerococcus urinaeequi 430979003
Pedobacter 115128003
Pedobacter heparinus 113554004
Pedobacter piscium 113555003
Peptococcus 20585006
Peptoniphilus asaccharolyticus 433440001
Peptococcus niger 112344007
Staphylococcus saccharolyticus 41103009
Peptoniphilus 430742009
Peptoniphilus asaccharolyticus 433440001
Peptoniphilus harei 433373007
Peptoniphilus ivorii 433375000
Peptoniphilus lacrimalis 433376004
Peptostreptococcus 243417000
Peptostreptococcus anaerobius 19217002
Peptoniphilus asaccharolyticus 433440001
Megasphaera elsdenii 26044001
Anaerococcus hydrogenalis 413519008
Anaerococcus lactolyticus 413520002
Finegoldia magna 417469002
Parvimonas micra 434293007
Anaerococcus octavius 413521003
Atopobium parvulum 113631003
Anaerococcus prevotii 413522005
Blautia producta 698205008
Anaerococcus tretradius 413524006
Anaerococcus vaginalis 413525007
Photobacterium 115046007
Photobacterium damselae subsp damselae 387799003
Photorhabdus 115022000
Photorhabdus asymbiotica 415093002
Photorhabdus luminescens 115023005
Photorhabdus temperata 415094008
Plesiomonas 42929008
Plesiomonas shigelloides 38643006
Pluralibacter 716344002
Pluralibacter gergoviae 716346000
Pluralibacter pyrinus 114455007
Porphyromonas 114154000
Porphyromonas asaccharolyticus 115950003
Porphyromonas cangingivalis 114156003
Porphyromonas canoris 114157007
Porphyromonas cansulci 114158002
Porphyromonas catoniae 114159005
Porphyromonas circumentaria 114160000
Porphyromonas crevioricanis 114161001
Porphyromonas endodontalis 2401005
Porphyromonas gingivalis 114163003
Porphyromonas gingivicanis 114164009
Porphyromonas gulae 433019007
Porphyromonas levii 114165005
Porphyromonas macacae 114166006
Porphyromonas macacae 114166006
Porphyromonas somerae 450442004
Pragia 115024004
Pragia fontium 115025003
Prevotella 114129000
Prevotella bivia 114131009
Prevotella buccae 114134001
Prevotella buccalis 114135000
Prevotella corporis 114136004
Prevotella dentalis 114137008
Prevotella denticola 114138003
Prevotella disiens 114139006
Prevotella enoeca 114140008
Prevotella heparinolytica 114141007
Prevotella intermedia 114142000
Prevotella loescheii 114143005
Prevotella marshii 417919003
Prevotella melaninogenica 114144004
Prevotella multiformis 418615005
Prevotella multisaccharivorax 418858007
Prevotella nigrescens 114145003
Prevotella oralis 114146002
Prevotella oralis group 440091000124102
Prevotella oris 114147006
Prevotella oulorum 419466004
Prevotella oulorum 419466004
Prevotella pallens 114149009
Prevotella ruminicola 115949003
Prevotella salivae 418278009
Prevotella shahii 419720005
Prevotella tannerae 114151008
Prevotella veroralis 114152001
Bacteroides zoogleoformans 425729002
Propionibacterium 34844008
Propionibacterium acidipropionici 2379005
Cutibacterium acnes 39473003
Propionibacterium australiense 433037008
Propionibacterium avidum 47473006
Propionibacterium cyclohexanicum 113916009
Propionibacterium freudenreichii 23871008
Propionibacterium granulosum 87755005
Propioniferax innocus 114056000
Propionibacterium jensenii 86720000
Propionibacterium lymphophilum 26102005
Propionibacterium microaerophilum 431383004
Propionibacterium prionicus 113919002
Propionibacterium propionicum 427413007
Propionibacterium thoenii 30087004
Propionibacterium thoenii 30087004
Propioniferax 114055001
Propioniferax innocus 114056000
Propionimicrobium 429177000
Propionimicrobium lymphophilum 429395008
Proteus 50517009
Proteus hauseri 417592004
Providencia alcalifaciens 46349009
Proteus mirabilis 73457008
Proteus myxofaciens 86145008
Proteus penneri 45298005
Providencia rettgeri 14196002
Proteus vulgaris 45834001
Providencia 112284001
Providencia alcalifaciens 46349009
Providencia rustigianii 19196004
Providencia heimbachae 47300009
Providencia rettgeri 14196002
Providencia rustigianii 19196004
Providencia stuartii 1445008
Pseudoclavibacter 440171004
Pseudoflavonifractor 447037007
Pseudoflavonifractor capillosus 447428000
Pseudomonas 57032008
Delftia acidovorans 20432002
Pseudomonas aeruginosa 52499004
Pseudomonas alcaligenes 46247008
Burkholderia gladioli 113671008
Burkholderia gladioli 113671008
Stenotrophomonas maltophilia 113697002
Stenotrophomonas maltophilia 113697002
Burkholderia cepacia 113669008
Pseudomonas stutzeri 58024003
Pseudomonas chlororaphis 63949003
Burkholderia gladioli 113671008
Acidovorax delafieldii 113685003
Brevundimonas diminuta 113689009
Acidovorax facilis 113686002
Pseudomonas fluorescens 39289003
Burkholderia gladioli 113671008
Chryseomonas luteola 33919008
Burkholderia mallei 113674000
Stenotrophomonas maltophilia 113697002
Pseudomonas marginalis 116414007
Pseudomonas mendocina 59419001
Pseudomonas monteilii 113930004
Pseudomonas mosselii 437937006
Burkholderia cepacia 113669008
Alcaligenes faecalis 25223004
Pseudomonas oryzihabitans 113931000
Sphingomonas paucimobilis 243350004
Pseudomonas stutzeri 58024003
Pseudomonas pertucinogena 17191002
Ralstonia pickettii 114053008
Pseudomonas pseudoalcaligenes 30955004
Burkholderia pseudomallei 116399000
Pseudomonas putida 68608003
Shewanella putrefaciens 113700003
Burkholderia pyrrocinia 113677007
Pseudomonas stutzeri 58024003
Comamonas testosteroni 43721005
Pseudomonas veronii 113940001
Brevundimonas vesicularis 113690000
Pseudoramibacter 115131002
Pseudoramibacter alactolyticus 113828002
Pseudoxanthomonas 428474009
Pseudoxanthomonas koreensis 698063009
Psychrobacillus 709302003
Psychrobacter 34412002
Psychrobacter immobilis 70465007
Psychrobacter phenylpyruvicus 113941002
Rahnella 48569008
Rahnella aquatilis 10021006
Ralstonia 415234001
Cupriavidus gilardii 416329005
Ralstonia insidiosa 415235000
Ralstonia mannitolilytica 415236004
Ralstonia pickettii 114053008
Cupriavidus respiraculi 416495009
Raoultella 417468005
Raoultella ornithinolytica 416832000
Raoultella planticola 416264004
Raoultella terrigena 416096003
Rapid growing mycobacteria 116494006
Rhizobium 415303003
Rhizobium radiobacter 438107000
Rhizobium rubi 438073004
Rhizobium vitis 438218005
Rhodococcus 34534002
Tsukamurella paurometabola 113510005
Gordonia bronchialis 113646005
Mycobacterium chlorophenolicus chlorophenolicum 713611009
Gordonia sputi 113648006
Rhodococcus equi 80771008
Rhodococcus erythropolis 22478004
Rhodococcus fascians 28901005
Rhodococcus globerulus 44348004
Rhodococcus gordoniae 430885009
Rhodococcus fascians 28901005
Gordonia sputi 113648006
Rhodococcus rhodochrous 54379008
Rhodococcus rhodochrous 54379008
Gordonia rubripertincta 113647001
Gordonia terrae 113649003
Rickettsia 62065006
Rickettsia akari 30769009
Rickettsia conorii 32691002
Rickettsia parkeri 85738007
Rickettsia prowazekii 28499009
Bartonella quintana 103511001
Rickettsia rickettsii 18054009
Rickettsia sibirica 85288000
Orientia tsutsugamushi 114233001
Rickettsia typhi 79284001
Riemerella 115145008
Riemerella anatipestifer 113658005
Robinsoniella 450447005
Robinsoniella peoriensis 450448000
Bartonella elizabethae 103513003
Bartonella henselae 103510000
Bartonella quintana 103511001
Bartonella vinsonii 103512008
Roseomonas 115159001
Roseomonas cervicalis 113711006
Roseomonas gilardii 113710007
Roseomonas mucosa 415351006
Rothia 90163001
Rothia aeria 417029007
Rothia dentocariosa 35379007
Rothia mucilaginosa 416544005
Ruminococcus 28907009
Ruminococcus gnavus 88513000
Blautia hansenii 449574005
Blautia producta 698205008
Rummeliibacillus 450458001
Rummeliibacillus pycnus 450459009
Saccharomonospora 103501008
Saccharomonospora glauca 103504000
Saccharomonospora viridis 103505004
Saccharopolyspora 115144007
Saccharopolyspora rectivirgula 113657000
Salmonella 27268008
Salmonella bongori 398393000
Salmonella enterica 110378009
Sarcina 58039002
Micrococcus luteus 48299003
Sarcina ventriculi 22267009
Scardovia 438181001
Scardovia inopinata 441142005
Selenomonas 85986007
Selenomonas artemidis 6754006
Selenomonas dianae 86435000
Selenomonas flueggei 27333006
Selenomonas infelix 43571005
Selenomonas noxia 70096005
Selenomonas sputigena 23595003
Serpulina 115162003
Brachyspira pilosicoli 113517008
Serratia 42025004
Serratia entomophila 76656001
Serratia ficaria 802004
Serratia fonticola 112329006
Serratia grimesii 115005002
Serratia liquefaciens 23787004
Serratia marcescens 33522002
Serratia rubidaea 55825002
Serratia odorifera 10413007
Serratia plymuthica 28955009
Serratia proteamaculans 116135003
Serratia quinivorans 438199009
Serratia rubidaea 55825002
Serratia ureilytica 450416004
Shewanella 115158009
Shewanella algae 113702006
Shewanella putrefaciens 113700003
Shigella 77352002
Shigella boydii 55462008
Shigella dysenteriae 43612004
Shigella flexneri 85729005
Shigella sonnei 4298009
Simonsiella 16344005
Alysiella crassa 444924000
Simonsiella muelleri 74269008
Slackia 432913003
Slackia exigua 434236002
Slackia heliotrinireducens 437984006
Small-colony-forming beta-hemolytic group A streptococci 415534000
Small-colony-forming beta-hemolytic group C streptococci 415535004
Small-colony-forming beta-hemolytic group G streptococci 415536003
Sneathia 416469007
Sneathia sanguinegens 416737004
Solibacillus 699375003
Solibacillus silvestris 429471007
Solobacterium 415558001
Solobacterium moorei 413348001
Sphingobacterium 43780008
Sphingobacterium faecium 113953003
Pedobacter heparinus 113554004
Flavobacterium mitzutaii 113749005
Sphingobacterium multivorum 51595006
Pedobacter piscium 113555003
Sphingobacterium spiritivorum 61675006
Sphingobacterium thalpophilum 113954009
Sphingomonas 115130001
Sphingomonas parapaucimobilis 243349004
Sphingomonas paucimobilis 243350004
Spirillum 54700005
Sporolactobacillus 439462006
Sporolactobacillus laevolacticus 8331000146107
Sporosarcina 115164002
Staphylococcus 65119002
Staphylococcus arlettae 72465001
Staphylococcus aureus 3092008
Staphylococcus auricularis 45654003
Staphylococcus capitis 40347003
Staphylococcus capitis ss capitis 113962001
Staphylococcus capitis subspecies urealyticus 103492009
Staphylococcus caprae 76969000
Staphylococcus carnosus 9784002
Staphylococcus carnosus carnosus 438905007
Staphylococcus carnosus utilis 438733001
Macrococcus caseolyticus 416613009
Staphylococcus chromogenes 56629004
Staphylococcus cohnii 66872005
Staphylococcus cohnii ss cohnii 113963006
Staphylococcus cohnii subspecies urealyticus 103493004
Staphylococcus condimenti 439185000
Staphylococcus delphini 113964000
Staphylococcus epidermidis 60875001
Staphylococcus equorum 28217008
Staphylococcus equorum equorum 438005005
Staphylococcus equorum linens 438164005
Staphylococcus felis 113965004
Staphylococcus fleurettii 438257002
Staphylococcus gallinarum 8056006
Staphylococcus haemolyticus 83452006
Staphylococcus hominis 44827007
Staphylococcus hominis hominis 432505008
Staphylococcus hominis novobiosepticus 438202004
Staphylococcus hyicus 19683001
Staphylococcus chromogenes 56629004
Staphylococcus hyicus 19683001
Staphylococcus intermedius 34605002
Staphylococcus kloosii 53227003
Staphylococcus lentus 40253001
Staphylococcus lugdunensis 103494005
Staphylococcus lutrae 113968002
Staphylococcus muscae 113969005
Staphylococcus nepalensis 438681002
Veillonella parvula 90435009
Staphylococcus pasteuri 103495006
Staphylococcus pettenkoferi 428731005
Staphylococcus piscifermentans 113970006
Staphylococcus pseudintermedius 427316000
Staphylococcus vitulinus 440569005
Staphylococcus saccharolyticus 41103009
Staphylococcus saprophyticus 19743000
Staphylococcus saprophyticus ss bovis 113972003
Staphylococcus saprophyticus ss saprophyticus 113973008
Staphylococcus schleiferi 131360000
Staphylococcus schleiferi subsp. coagulans 113974002
Staphylococcus schleiferi ss. schleiferi 103496007
Staphylococcus sciuri 70806002
Staphylococcus sciuri carnaticus 113975001
Staphylococcus lentus 40253001
Staphylococcus sciuri rodentium 113976000
Staphylococcus scuiri scuiri 113977009
Staphylococcus simulans 52122005
Staphylococcus succinus 438729008
Staphylococcus succinus casei 440815004
Staphylococcus succinus ss. succinus 441130000
Staphylococcus vitulinus 440569005
Staphylococcus warneri 63550006
Staphylococcus xylosus 32737005
Staphylococcus, coagulase negative 116197008
Staphylococcus, coagulase positive 127535004
Stenotrophomonas 115656007
Stenotrophomonas maltophilia 113697002
Rothia mucilaginosa 416544005
Streptobacillus 29295005
Streptobacillus moniliformis 16372003
Streptococcus 58800005
Streptococcus acidominimus 51182006
Granulicatella adiacens 113713009
Group B streptococcus 43492007
Streptococcus alactolyticus 34228005
Streptococcus anginosus group 415597009
Streptococcus anginosus 44304009
Streptococcus anginosus group 415597009
Streptococcus anginosus-constellatus 70160008
Streptococcus australis 415598004
Enterococcus avium 87875008
Streptococcus bovis group 415599007
Streptococcus canis 88231003
Streptococcus gallolyticus 113985000
Enterococcus casseliflavus 30949009
Enterococcus cecorum 113722005
Streptococcus constellatus 76199005
Streptococcus constellatus subspecies constellatus 415601009
Streptococcus constellatus subspecies pharyngis 415602002
Streptococcus criceti 34838009
Streptococcus cristatus 113980005
Abiotrophia defectiva 113714003
Streptococcus dentisani 708952006
Streptococcus dolonei 12704003
Enterococcus durans 46464008
Streptococcus dysgalactiae 40812000
Streptococcus dysgalactiae subsp. dysgalactiae 113982002
Streptococcus dysgalactiae subsp. equisimilis 128338004
Granulicatella elegans 115944008
Streptococcus entericus 437956001
Streptococcus equi 12447002
Streptococcus equi subsp. equi 113984001
Streptococcus equi subsp. zooepidemicus 33708000
Streptococcus equinus 72646003
Enterococcus faecalis 78065002
Enterococcus faecium 90272000
Streptococcus ferus 10049004
Enterococcus gallinarum 53233007
Streptococcus gallolyticus 113985000
Streptococcus gallolyticus subspecies gallolyticus 421544007
Streptococcus gallolyticus subspecies macedonicus 421004005
Streptococcus gallolyticus subspecies pasteurianus 421253004
Lactococcus garvieae 27716002
Streptococcus gordonii 113986004
Blautia hansenii 449574005
Streptococcus hyovaginalis 113988003
Streptococcus infantarius 415603007
Streptococcus lutetiensis 415605000
Streptococcus infantarius subspecies infantarius 432506009
Streptococcus infantis 415604001
Streptococcus iniae 79050007
Streptococcus intermedius 62170002
Streptococcus alactolyticus 34228005
Lactococcus lactis 62079003
Streptococcus lutetiensis 415605000
Streptococcus macacae 59717000
Streptococcus anginosus group 415597009
Streptococcus mitis 57997003
Streptococcus mitis group 127539005
Gemella morbillorum 113765006
Streptococcus mutans 214001
Streptococcus mutans group 127536003
Streptococcus oligofermentans 440296007
Streptococcus oralis 19870004
Streptococcus ovis 438035003
Streptococcus parasanguinis 113990002
Streptococcus parauberis 113991003
Atopobium parvulum 113631003
Streptococcus gallolyticus subspecies pasteurianus 421253004
Streptococcus peroris 416347004
Streptococcus pluranimalium 438187002
Streptococcus pneumoniae 9861002
Streptococcus porcinus 59512008
Blautia producta 698205008
Streptococcus pseudopneumoniae 420470004
Streptococcus pseudoporcinus 429189003
Streptococcus pyogenes 80166006
Streptococcus ratti 10667007
Enterococcus saccharolyticus 103438005
Streptococcus salivarius 39888004
Streptococcus salivarius group 127537007
Streptococcus salivarius subsp. salivarius 84684000
Streptococcus salivarius subsp. thermophilus 23310006
Streptococcus sanguinis 113993000
Streptococcus sanguinis group 115658008
Streptococcus iniae 79050007
Streptococcus sinensis 438909001
Streptococcus sobrinus 43777007
Streptococcus suis 7912006
Streptococcus salivarius subsp. thermophilus 23310006
Streptococcus tigurinus 699479005
Streptococcus uberis 13250005
Streptococcus vestibularis 113998009
Streptococcus, group C 89181007
Streptococcus, group D 55547008
Streptococcus, group F 83503005
Streptococcus, group G 75012005
Streptomyces 47304000
Streptomyces albus 114001000
Streptomyces bikiniensis 438930005
Streptomyces candidus 438237001
Streptomyces griseus 114000004
Streptomyces clavuligerus 438736009
Streptomyces griseus 114000004
Streptomyces filamentosus 438231000
Streptomyces griseus 114000004
Streptomyces lincolnensis 437827000
Streptomyces filamentosus 438231000
Streptomyces griseus 114000004
Streptomyces somaliensis 11007001
Streptomyces spectabilis 438852000
Streptomyces thermovulgaris 437780007
Streptomyces venezuelae 66591004
Succinivibrio 66866005
Succinivibrio dextrinosolvens 63902002
Sutterella 417407002
Sutterella wadsworthensis 417645005
Suttonella 116391002
Suttonella indologenes 116392009
Tannerella 419107003
Tannerella forsythia 420048009
Legionella maceachernii 116379006
Legionella micdadei 116380009
Tatumella 12162005
Tatumella ptyseos 1546007
Tetragenococcus 417005000
Tetragenococcus halophilus 438324001
Tetragenococcus solitarius 431990001
Thermoactinomyces 28042005
Tissierella 37421007
Tissierella praeacuta 75376009
Trabulsiella 243308004
Trabulsiella guamensis 243309007
Treponema 30345008
Treponema carateum 14562002
Treponema pallidum 72904005
Tropheryma 417733009
Tropheryma whipplei 417060007
Trueperella 704974007
Trueperella bernardiae 704975008
Trueperella pyogenes 258933002
Tsukamurella 115135006
Tsukamurella inchonensis 113509000
Tsukamurella paurometabola 113510005
Tsukamurella pulmonis 113511009
Tsukamurella strandjordii 417316004
Tsukamurella tyrosinosolvens 113512002
Turicella 415762009
Turicella otitidis 415763004
Turicibacter 438726001
Turicibacter sanguinis 440839009
Ureaplasma 29680004
Ureaplasma parvum 438391000
Ureaplasma urealyticum 12006007
Vagococcus 116416009
Vagococcus fluvialis 116418005
Vancomycin resistant Enterococcus 113727004
Vancomycin resistant Enterococcus faecalis 712663006
Vancomycin resistant Enterococcus faecium 712665004
Veillonella 29875005
Veillonella parvula 90435009
Veillonella atypica 21633009
Veillonella caviae 63486005
Veillonella criceti 77243008
Veillonella dispar 29564004
Veillonella montpellierensis 438330001
Veillonella parvula 90435009
Veillonella ratti 4427009
Veillonella rodentium 78654008
Vibrio 34872001
Vibrio alginolyticus 45749000
Vibrio harveyi 84003007
Vibrio cholerae 75953000
Vibrio cincinnatiensis 36764009
Photobacterium damselae subsp damselae 387799003
Campylobacter fetus 84210007
Vibrio fluvialis 43199008
Vibrio furnissii 6387008
Vibrio harveyi 84003007
Vibrio metschnikovii 28382009
Vibrio mimicus 11776003
Vibrio parahaemolyticus 11736008
Campylobacter sputorum 91524009
Wolinella succinogenes 32360004
Vibrio harveyi 84003007
Vibrio vulnificus 55905000
Virgibacillus 114108009
Virgibacillus pantothenticus 114109001
Streptococcus, viridans group 31703004
Wautersia 415834009
Cupriavidus gilardii 416329005
Cupriavidus pauculus 429465001
Cupriavidus respiraculi 416495009
Weeksella 28853003
Weeksella virosa 83326004
Bergeyella zoohelcum 113718000
Weissella 118293006
Weissella confusa 113639001
Wolinella 84909009
Campylobacter curvus 116037008
Campylobacter rectus 113525005
Wolinella succinogenes 32360004
Xanthomonas 21544006
Stenotrophomonas maltophilia 113697002
Xenorhabdus 22423005
Photorhabdus luminescens 115023005
Xenorhabdus nematophila 57111002
Yersinia 4668009
Yersinia aldovae 91246002
Yersinia aleksiciae 450391006
Yersinia bercovieri 103434007
Yersinia enterocolitica 65255000
Yersinia frederiksenii 85159008
Yersinia intermedia 10334001
Yersinia kristensenii 91042006
Yersinia mollaretii 103435008
Yersinia pestis 54365000
Yersinia pseudotuberculosis 90530002
Yersinia rohdei 87145000
Yersinia ruckeri 64125009
Yokenella 14943005
Yokenella regensburgei 89477001
Clostridium oroticum 29280008