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Quiescence: Quiescence is a state of quietness or inactivity, that is the state of a cell when it is not
dividing. But they remain metabolic active and replication competent.
Senescence: Senescence means "to grow old”. They are metabolic active but replication incompetent.
(Postmitotic: Mature terminally differentiated cells that are replication incompetent.)
Overexpression of cyclin D1 tied to gene amplification has been identified in breast, esophageal, bladder, lung, and
squamous cell carcinomas. Other cyclin amplifications are less prevalent, e.g. cyclin E was reported to be
overexpressed in breast and colon cancer, while cyclin A and cyclin E are amplified in some cases of lung carcinomas.
Checkpoint to stop
Mitogenic Signals: Growth factors and environment exert
cycle
Growth Factors mitogenic effects that trigger the production
- Cyclin D of cyclin D, which then binds to Cdk4/6 to
Cell Matrix Cyclin D begin the process of activating the kinase
Junctions Synthesis - CDK 4/6
(Kinase)
Inhibition by p16lnk4
Stimulatory Kinases CDK2 Cyclin
CDK2 + Cyclin
(CAK) E A
Positive
feedback DNA
Dna Master Switch loop
Replication
(Tumor Suppressor)
Hyperphosphorylation
!
DNA replication
E2F
Factors
(Transcription Factor)
“R”point:
Rb inactivation
by hyper-
phosphorylation
results in release pRb is the Gatekeeper of Cell Cycle
of various E2F Entry Hyperphosphorylated
transcription Throughout cell cycle
factors. ---Once progressing through G1/S
boundary, E2Fs are degraded but Rb
G1 Transition:
Cell Kinases that are activated in late G1 and early S enable the initiation and maintenance of DNA
divisi synthesis. There are two groups:
on CDK4/6 and CDK2.
kinas (These CDKs are analogous to the CDK1 kinase that pairs with cyclin B to initiate mitosis.)
es
(CDK
s)
There are three: cyclins D, E, and A. They bind specifically to one of the CDKs and, like cyclin B, help to
activate their CDK partner. They pair up in the following way:
CDK4/6cyclin D
G1 CDK2cyclin E (The G1 CDKs are activated in G1-S transition
cyclin CDK2cyclin A. in the order in which they are listed above.)
s
The master switch at R; also acts as a tumor suppressor. Rb stands for “retinoblastoma”
- major role is to regulate the G1S transition
- encoded by a tumor supresspr gene
- Hyper-phosphorylated Rb protein E2F (transcription factor is released and cell cycle starts again
Rb - it was first discovered in a mutated, inactive form in children with retinoblastoma tumors. (found in the retina)
A family of transcription factors that are released by Rb to turn on the last genes needed for the start of
DNA replication.
- required for expression of various enzymes involved in synthesis of dNTPs and DNA
E2F
A transcription factor that blocks progression through the cell cycle and initiates DNA repair if DNA replication
is not proceeding faithfully. It can also initiate cell death (apoptosis) if DNA damage is too severe to be
repaired. p53 is a tumor suppressor.
"guardian" of genomic integrity - tries to repair the DNA during the cell cycle and if it does not repair induces
apapoptosis
- activates DNA repair proteins
p53 - induces growth arrest (holds cell cycle at G1/S phase to allow for repair of DNA)
- initiates apoptosis if the DNA damage proves to be irreparable
controls the "kill switch" of cell cycle progression
In a normal cell, p53 level is low due to the continuous turnover by its regulator Mdm2. During
cellular stress such as DNA damage, the DNA repair checkpoint signal will lead to the
dissociation of the p53 and mdm2 complex. Once activated, p53 will induce a cell cycle arrest
Defects Leading to Tumor Formation Regardless of whether the defects
Two types of Defects that lead to cancer: are genetic or epigenetic in nature, a
Gain-of-function alterations affecting oncogenes common net consequence is
o Gain-of-function = promoting growth factors dysregulation of gene expression in
Loss-of function alterations affecting tumor suppressor genes.
Genes associated with cancer:
Oncogenes and tumor suppressor genes that are recurrently mutated in cancer cells of various types include:
o RAS, PIK3CA, EGFR, RAF, β-catenin, and MYC oncogene proteins, the p53, p16Ink4a, ARF, RB1, PTEN,
APC, and NF1 tumor suppressor proteins.
Genetic Factors
1) Proto-oncogenes Normal version of the gene; oncogene is a mutated or overexpressed form of the gene; These are the genes that
promote cancer. Code for proteins that promote cell growth and division.
First discovered in their oncogenic
a mutation mimicking a growth signal
form in retroviruses causing tumors
activation of one cellular proliferation oncogene (K-ras)
in animals
Gene translocations (ex. Lymphomas: c-myc translocation to the
immunoglobulin H-chain locus) Activated by:
requires a gain-of-function mutation EGF/PDGF signal transduction
o mutations are genetically dominant pathway contains several classical
Proto-oncogenes are often involved in signal transduction and execution proto-oncogenes – this pathway is
of mitogenic signals, usually through their protein products activated in many tumors and is a
Examples of proto-oncogenes include RAS, WNT, MYC, ERK, and target for intervention (Growth
TRK factors may act oncogenic if their
Oncogenes: myc; ras; BCABL; ERK; WNT, etc. expression is deregulated; the
Immunoglobulin heavy chain has a constant portion and a variable malignant cell expresses both
portion. The variable portion binds to a pathogen/tumor growth factor and receptor: an
autocrine feedback loop)
2) Tumor suppressor genes Genes that protect against cancer. Code for
proteins that stop or regulate cell growth and division Chromosomal abnormalities
Chromosomal abnormalities: involve inactivation or loss of tumor-suppressor genes
requires a loss-of-function mutation;
o mutations are genetically recessive Platelet derived growth
Examples of tumor suppressor genes include RB, p53, BRCA1, BRCA2, APC and DCC factor
that codes for a protein that functions as a "master brake" in the cell cycle. When you have a
cut the platelets
Tumor Suppressor Gene: activate and come
APC (adenomatosis polyposis
coli)
close together. This
APC protein helps secretes the
control how often a cell pathway to make
divides, how it attaches the cells proliferate
to other cells within a and heal/seal the
wound
Epidermal growth
3) Cell cycle multiple genetic changes can affect cell cycle factor
Has 2 chains
DNA Repair Checkpoint
1. 2. 3.
DNA damage activates ATM/ATR, p53 up-regulates p21 transcription DNA repairs enzymes such as BRCA1 & 2
Chk1/Chk2 which stabilizes phosphorylate which inhibits CDK2 and blocks further repair the damage.
and activate p53 phosphorylation of Rb, stop the cycle
until DNA repair is completed.
Cell Growth
What are growth factors? Ex- PDGF dimer;
activates fibroblasts in the tissue and
proliferate.
Serum obtained from blood {anti-coagulate
blood=not clot} there is a clump of red cells at
the bottom and the clear liquid on top is the
mutation
Mutation Mutation of
Mutation inactivates
inactivates proto-
Cells inactivates several more
tumor oncogene Cancer
proliferate DNA repair tumor
suppressor creates an
gene supressor
gene onco-gene
genes
Why does it take a very long time for tumor development?
Normal Hyperplastic
Dysplasia
epithelium epithelium *** each of these steps
takes a long time to occur
Adenomatous Invasion &
Carcinoma
polyp metastasis
Precursor Basics
Metaplasia: Replacement of one cell type with a better suited cell type in response to an injurious stimulus
o May lead to dysplasia if the stimulus is not removed
Dysplasia (“Disordered growth”): Predominantly used when describing premalignant epithelial cell changes
o Cells exhibit progressive changes similar to those seen in malignancy (mild, moderate, or severe)
o Some of the same mutations in cancer can be seen in low grade dysplasia (the continuum)
o Loss of maturation, increased number of mitoses (can divide mor/ more proliferation), pleomorphism, increased
N/C ratio
o Low to moderate grade dysplasia may reverse if stimulus is removed
Carcinoma in situ: Severe, full-thickness dysplasia
o Cancer is intraepithelial (has not breached the basement membrane); often seen near invasive cancer
o Very likely to progress to invasive cancer, but that may take years to accumulate the next round of mutations
required for frank malignancy
o Interesting exceptions for nature of risk include lobular breast carcinoma in situ: If found in one breast, the risk
applies to both breasts
Malignant vs. Benign Tumors
Benign tumors ( not cancer)tumor cells grow only locally and cannot spread by invasion or metastasis
Malignant ( cancer)cells invade neighboring, enter blood vessels, and metastasize to different sites
Benign Tumors:
Characteristics Benign Malignant Remain localized, with
Differentiation/ Well differentiated; structure Some lack of differentiation exceptions including:
anaplasia sometimes typical of tissue of (anaplasia); structure often o Intravenous
origin atypical leiomyomatosis
[anaplasia= lack of
differentiation] Malignant Tumors:
Can to invade adjacent
Rate of growth Usually progressive and slow; Erratic, may be slow to tissues and spread to
may come to a standstill or rapid; mitotic figures may be other sites
regress; mitotic figures rare numerous and abnormal Differentiation: Degree
and normal of structural and
functional resemblance
Local invasion Usually cohesive, expansile, Locally invasive, infiltrating to normal cell
well-demarcated masses that surrounding tissue; Anaplasia: Absence of
do not invade or infiltrate sometimes may be differentiation
surrounding normal tissues misleadingly cohesive and o Marked
expansile pleomorphism and
Metastasis Absent Frequent; more likely with
large undifferentiated
primary tumors
“Hallmarks of Cancer” are 8 physiologic changes related to the molecular alterations present in all cancers:
Autonomous proliferation via oncogenes
Ability to ignore signals that inhibit growth
Utilize aerobic glycolysis to synthesize cell material needed for rapid growth (Warburg effect)
Evade programmed cell death
Stem cell-like replicative potential
Induction of angiogenesis to support growth
Ability to invade locally and travel far (metastasize)
o Loss of contact inhibition
Ability to hide from the immune system that seeks to eliminate cells with abnormal antigens (oncoproteins)
How does Cancer Spread?
Barriers to dissemination include cell-cell contact & capsules (slow-growing tumors)
Cell-cell contact: Intercellular junctions, intercellular adhesion molecules (like E-cadherin), and ECM proteins
Capsule: Rim of fibrous tissue that forms in response to pressure-induced hypoxic injury to stromal cells
Cancer is often unencapsulated (or pseudoencapsulated)
Margins may be microscopically infiltrative even when they appear circumscribed
Invasion (locally and across tissue boundaries including body cavities) is facilitated by mechanisms including
Mutations leading to loss of E-cadherin function
Overexpression of proteases like matrix metalloproteinases by tumor cell
Stimulation by matrix metalloproteinases release of VEGF, angiogenesis
Signaling that promotes survival of free tumor cells over apoptosis
Solid tumor metastasis begins with invasion of blood and lymphatic vessels
Metastases ? more likely in poorly differentiated solid neoplasms
Liquid tumors (leukemias, lymphomas) travel through the blood vessels regularly because they are hematopoietic, so
by definition, are disseminated at diagnosis
Site of circulating tumor cell deposition is based on:
Pathway of drainage (e.g. closest nodes and organs)
Tropism for tissue types (unclear...? adhesion molecules, chemokines)
Three pathways of spread:
Lymphatic spread
Hematogenous spread
Direct seeding of body cavities and surfaces
Metastasis
Hematogenous spread: In blood vessels
o Cancer cells may deposit in the first capillary bed in the drainage (liver, lung, paravertebral plexus)
o Venous propagation heart: RCC, HCC
Lymphatic spread: In lymph vessels
o Anatomic drainage routes
o Sentinel lymph node: The first node to receive lymph from the primary tumor
o Skip metastases: Bypassing local nodes (sampling error vs collateral pathways)
Multiple cancer lesions usually metastasize
o Exceptions include synchronous and/or metachronous primary cancers
Normal cell Cancer cell Implications of cancer immunity
Stable pattern of cytokine and Abnormal expression of growth Potential local inhibitory effects on innate
growth factor expression factors such as VEGF and TGF-b and adaptive immunity
Concepts to review:
Carcinogenesis: The stepwise process that turns normal cell types to cancer
The accumulation of mutations that allow the cell to achieve the eight hallmarks of malignancy
Stepwise Accumulation of Complementary Mutations
Initiating mutation: The first of many mutations; initiated cells can persist for years and self-renew and proliferate in a
stem cell-like manner
Driver mutations: Allow the transforming alterations that define cancer cells (cancer hallmarks)
Loss of function mutations in genes that help the cell maintain genomic integrity accumulation of many driver and
passenger (phenotypically inconsequential but antigenic) mutations over time
Neoplastic transformation (genetic alterations) – expression of cell surface antigens, i.e. nonself antigens seen by the
immune system
Tumors arise when there is a loss of proliferative control or apoptosis
Benign tumors are localized but metastatic tumors invade and spread to distant sites
Genetic, environmental, and viral factors as well as immune dysfunctions contribute to tumor formation
Induction of cancer is a multistep process that involves oncogenes and tumor suppressor genes alterations
Immune Response
Immune response can be affected by microbes such as: Bacteria, Viruses, Parasites, Fungi and Cancer( not a microbe)
Innate Immunity Vs. Adaptive Immunity First line of
Innate immune response- first response to a pathogen defense
Cytoki Adaptive immune response
Induced early – 2nd line of defense.
nes Responses start several days later- Occurs 0-4 hrs
4 hrs- 4 days
After 4 days until pathogen cleared
Cellular components
Cellular components:
Phagocytosis= eats any
Cellular components:
Macrophages
Neutrophils/Granulocytes (PMN) Adaptive immunity
Dendritic cells Each lymphocyte has unique
receptors that recognize specific
Natural killer cells
molecule on pathogen
Mast cells/basophils Kill viral infected cells and
Eosinophils tumor
Allergic cells
responses Innate immunity macrophages
Soluble Mediators: Parasite defense Molecules on pathogens:
Complement proteins o PAMPs
Defensins & pentraxins How do they recognize pathogens?
- Via: PRRs & TLRs
Cytokines/chemokines Pathogen recognition receptorsthese bind to PAMPS
Interferons: anti-viral
Complement: (soluble mediator)
What is a complement system?
Complement (5-10% of plasma proteins) present in plasma as zymogens and on cell surfaces; C proteins interact
with each other to produce biologically active inflammatory mediators that promote cell and tissue injury
o Why do complement need to be in an inactive form? So it doesn’t attack your own cells when there is no pathogen
present
Zymogen an inactive precursor of an enzyme
Who makes them?
Produced constantly without stimulus “constitutively” by the liver and at sites of inflammation by macrophages &
dendritic cells
What effect?
Complement products mark the pathogen for destruction. Final outcome of C activation: killing of pathogen
(directly or by phagocytosis) and inducing inflammatory response
Components of acute phase response
i.e. concentrations increase during infections, injuries and trauma – recent studies have shown increased levels of
complement degradation products in plasma of cancer patients
Complement= heat labile
What is the role of complement in Immune Response
Removal of immune
Inflamation Opsonization Lysis by MAC
complexes
Recruitment of inflamatory and Opsonization of pathogens Killing of pathogens
immunocpmetent cells "getting ready to eat" MAC = membrane attack complex
when you recruit these cells they When bacteria is "opsonized" aka Terminal pathway (shared by
can destroy the cell in an infection macrophages can "eat" better. all 3 pathways)
or destroy tumor cells
e.g. Macrophages, neutrophils,
and other cells
1. 2. 3. 4.
How does complement work in terms of Cancer:
C can act to kill antibody-coated tumor cells
C can support chronic inflammation (bad for host; good for tumor)
Conversely, C can hamper anti-tumor immune response and thus enable tumor progression
In presence of malignancy, the balance between concentrations and proportions of complement components in body
fluids is lost – tumor cells produce C3
C system is pathologically activated in the tumor microenvironment (this can promote tumor growth because of
dysregulated inflammatory response, effect on cell proliferation, EMT, migration and invasiveness of tumor cells
Various complement components were shown to increase tumor growth (e.g. C3a), angiogenesis (C1q, C3a, C5a)
C proteins activate and recruit macrophages to tumor tissue (tumor cell derived C3a promotes the accumulation &
immunosuppressive activity)
C can enhance tumor cell proliferation (C3 & C5)
Mediates epithelial to mesenchymal transition in cancer cells
Imbalanced C activation was shown to trigger metastatic pathways by enhancing motility of cancer cells and
disrupting tissue barriers
Enhance immunosuppression by upregulating molecules such as PDL-1, Arg-1, IL-10, and TGF-b1
Complement activation in the TME (tumor microenvironment)
Important!
Complement damage is generally limited to the
immediate area in which complement is activated
because of the:
Short half-lives of the activated complement
components and their rapid inactivation.
Important!
B cell receptors can not pick up signals on it’s own
because it needs alpha and beta immunoglobulins
Cellular Response
Life-styles:
Extracellular – Bacteria (e.g. staphylococcus, Bacterial toxin from Clostridium t.)
Intracellular:
o Cytosolic Viruses (Influenza; HIV; Smallpox)
o Vesicular Bacteria (M. tuberculosis)
αβ T-cells MHC
Adaptive immunity Features:
Recognize antigens in the groove of either MCH I or MHC II
It takes time (lag phase)
o T cells that recognize peptides in the groove of MHC I are CD8+ T cells
Exquisitely specific for
All cells in body (except red blood cells) are represented by MHC1
immunizing antigen
Intracellular antigen
Memory
Binds to α 3 domain
o T cells that recognized peptides in the groove of MHC II are CD4+ T cells Lack of immunity to self antigens
Extracellular antigen
Binds to β 2 domain
MHC = major histocompatibility
Epitopes seen by BCR + TCR Epitope=
antigen
BCR Antibody epitopes (lysozyme)
On the surface or outside of the protein
Hydrophilic regions of the protein, i.e. are accessible to the solvent water
Important!!
TCR epitopes (lysozyme) What is clonal selection theory?
Peptide fragments derived from pathogens displayed on MHC o Each clone will respond to a specific
Embedded within the folds of the protein, not accessible to the solvent water antigen and then expand/proliferate.
The clones have memory cells which
Effector functions: TH cells help macrophages + B cells lead to recognition of the antigen if it
CD4 cells: Help MØs, T cells, B By secreting cytotoxins and inducing cell- was preciously used
cell contact
cells
Cytotoxic T cells major function is to kill
CD8 T cells: kill infected cells How does is contribute to 10 & 2 0 immune
response?
“Cytotoxic” “Helper” “Regulatory” o In primary response, the clone is picked
by the antigen and then expanded. This
+ is still a pretty slow response (1 week)
CD4 T Cell o In secondary response, the clones are
Reg
already expanded so each clone will
expand/proliferate even more leading to
a faster response (shorter lag phase)
Self
Antigen Why doesn’t it respond against your own
cells?
o Some of the self-reacting cells/antigens
are deleted
Adaptive response
How is it possible for B and T cells to recognize so many different types of antigens? Because of somatic gene rearrangement; use RAG enzymes
1 gene 1 polypeptide for immunoglobulin or TCR
T-cell Steps:
1. Coming out of the bone marrow the T-cells are called “Naïve” 1. B/T cells “see” antigen in LN (lymph
2. To get activated it needs to see the antigen (signal 1) and co-stimulation (signal 2) if not they continue to
node);
3. Once activated goes through proliferation and differentiation recirculate
4. To do it’s function; becomes Effector/memory cells 2. B cells that see antigen undergo
Where do immune reactions occur? activation by Ag plus T-help
Lymphocyte Trafficking 3. Activated B cells go to follicles and
1. Transport of antigen (from local site to form germinal centers; activated T cells
2. Recognition of antigen by lymphocyte (B-cell or T-cell) occurs in lymphoid tissues
go to the site of infection
3. Effector lymphocytes move from lymphoid tissues into lymphatics and to 4. infected tissues differentiated plasma cells
Terminally
4. Memory lymphocytes continue to circulate, “monitoring” antigens in lymphoid tissues
go to the medullary cords and leave the
Interleukin (IL-2)
Produced primarily by T cells
Required for T cells to proceed through differentiation and proliferation
Signals T cells through its receptor IL-2R
Weak on naïve T cells (dimer); strong on mature T cells (trimer)
o Naïve T cells express only the β and γ chains
o The γ chain is a component of a number of interleukin receptor and is often referred to as “the common γ chain”
o Activated T cells express α (CD25), β, and γ chains
Required to signal T cell differentiation & proliferation Important!
IL-2 can function in autocrine (self-stimulation) and paracrine (stimulate nearby
TH1tIFN-γ ( manner
cells) interferon gamma) crucial for
TH1! Activates macrophages and aids in CD8.
What determines the type of T effectors generated?
TH2 clonal expansion of B cells {IL-4 & IL-5}
How are memory and effector cells different from naive cells?
Recirculate to peripheral tissue (memory + effector cells) instead of recirculation to lymphoid tissue (naïve cells)
Can be activated directly at the site of infection by DCs and macrophages presenting Ags
Activation requirements are not as stringent (e.g. do not require co-stimulation through CD28)
Memory cells: decreased expression of L-selectin; increased expression of CD44; express CD45RO instead of
CD45RA
“Braking” molecules: CTLA-4 (CD152) & PD-1
CTLA-4:
o Expressed after T cell is activated
o Interacts with B7
o Affinity of CTLA-4 for B7 is 20x greater than that of CD28 for B7
o Effect of CTLA-4:B7 interaction: opposes that of CD28:B7; signals lead to “braking” instead of activation
PD-1 (Programmed Death Receptor 1:
o Member of B7 family of costimulatory molecules
o “Braking’ molecule which is expressed on T effector (i.e. after activation)
o Ligands: PDL-1 & PDL-2
Key points need to know!!
Innate and adaptive immune systems
recognize many different types of
pathogens (intracellular vs. extracellular)
and destroy them.