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Type II Antithrombin Deficiency Caused by A Founder Mutation Pro73Leu in The Finnish Population: Clinical Picture
Type II Antithrombin Deficiency Caused by A Founder Mutation Pro73Leu in The Finnish Population: Clinical Picture
Type II Antithrombin Deficiency Caused by A Founder Mutation Pro73Leu in The Finnish Population: Clinical Picture
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ORIGINAL ARTICLE
To cite this article: Puurunen M, Salo P, Engelbarth S, Javela K, Perola M. Type II antithrombin deficiency caused by a founder mutation
Pro73Leu in the Finnish population: clinical picture. J Thromb Haemost 2013; 11: 1844–9.
AGGGCTCAGAACAGAAGATCC
ACCATTTTTTTTTGACTTCTAT
gCCTTGAAGTAAATGGTGTTA
TCACCTCAAGAAATGCCTTA
agCGAAAAGCCAACAAATCC
GAGGGTGTCATTACAGGCA
gGGTATTGTTGCAGAAGGC
Forward/
gaaaGGAACTTGCCTTCCTG
GAATGACATCGGTGATTC
ggaAATCCAGAGCGGCCA
AGGCAAGTTCCGTTATC
Amplicon reverse Primer sequence
cccCTCCCGTGACAGGTC
TCCCATGAATCCCATGT
GAAGATTAGCGGCCAT
TGGGGTTTAGCGAAC
TTCAAGGCCAACAGG
GCCAAACTGAACTGC
1 F CAGCCTTTGACCTCAGTTCC
1 R GGCCTGGTCTTCTCAAAGG
2 F CTAGGGGTTGCAGCCTAGC
Extension primer
2 R CCAAAGGTGCTCCTAACAAGG
3 F TAGGCAGCCCACCAAACC
3 R TGAGTGGAGAGGAAGAACTCG
4 F TGCTGCCTGGGAAAATGGAGAAGC
4 R TCAGGGCTTCGGTCTCGCCA
5 F TGTCTTGTGTCAATAACTATCCTCCT
5 R ACTACCTTGCGGGTGGAGA
ACGTTGGATGGAAGAAGGCAACTGAGGATG
ACGTTGGATGAGGAAAATGCAGAGCAATCC
6 F GGTTGAAGCCAACTTTCTCC
ACGTTGGATGTTGAAGGGCAACTCAAGCAC
ACGTTGGATGAACAGGGTGACTTTCAAGGC
ACGTTGGATGCTATGATGTACCAGGAAGGC
ACGTTGGATGAACTAGGCAGCCCACCAAAC
ACGTTGGATGGGATTCATGGGAATGTCCCG
ACGTTGGATGCAGCCCTGTGGAAGATTAGC
ACGTTGGATGGAAGGTGTACTCACCTCAAG
ACGTTGGATGGCGGGACATTCCCATGAATC
ACGTTGGATGTGTTGGCCTTGAAAGTCACC
ACGTTGGATGGTGAGCTCATTGATGGCTTC
ACGTTGGATGGGCCATTCTGAGTACCTTGA
ACGTTGGATGACTGAACTGCCGACTCTATC
ACGTTGGATGCAAAGACTTCTCCGGTCTTC
ACGTTGGATGTTTGGTCGTACCTCCATCAG
ACGTTGGATGCATCTGATCAGATCCACTTC
6 R AGAGGTAGTGGGAGGGAAGG
7 F AAAAATGAACGGCAGAGTGG
7 R TTACCATGTGCCCCAATAGC
ACGTTGGATGTGAAGCAGCTGCAAGTACCG
ACGTTGGATGGAAGTGGATCTGATCAGATG
ACGTTGGATGTTGAAGGGCAACTCAAGCAC
ACGTTGGATGTGATGGAGAGTCGTGTTCAG
ACGTTGGATGCAGGTATTGTTGCAGAAGGC
ACGTTGGATGAATGACATCGGTGATTCGGC
ACGTTGGATGTCTCCAAAAAGGCGATTGGC
ACGTTGGATGGGCGATTGGCTGATACTAAC
ACGTTGGATGTTGGACAGTTCCCAGACACG
ACGTTGGATGCCTTATGGAATGCATCTGAG
ACGTTGGATGTGGCTACTCTGCCCATGAAG
ACGTTGGATGGGAAAGCTCACCCCTCTTAC
ACGTTGGATGTCCACGGCTTTTGCTATGAC
ACGTTGGATGTTGCTGCTCATTGGCTTCTG
ACGTTGGATGATCACCGATGTCATTCCCTC
ACGTTGGATGTTCTGTTCTGAGCCCTCATC
c.1312A>G) could not be assayed, as common nearby
variable sites prevented primer design for the target. As a
quality control measure, 20 samples were genotyped in
duplicate. The genotyping success rate was 100% for all
samples and sites, and genotype concordance was 100%
for the samples genotyped in duplicate.
Statistical analysis
at a P-value of ≤ 0.05.
Results
NM_000488.3)
Variant (ref.
c.409-2A>G
c.1315C>G
c.1171C>T
c.1273C>T
c.374G>A
c.878G>C
c.743T>G
c.158G>T
c.855C>A
c.653T>A
c.508T>C
c.685C>T
c.218C>T
c.481C>T
c.89T>A
g.173876635G>A
g.173873149G>A
g.173883881G>A
g.173881080G>A
g.173881053A>G
g.173873107G>C
g.173878965C>G
g.173878988G>T
g.173886395C>A
g.173883941C>A
g.173879911A>C
g.173880001A>T
g.173884010A>T
g.173876604T>C
g.173881154T>C
g.173883725C>T
Table 3 The variable sites detected in the whole population with both type I and type II antithrombin deficiency
alt., alternative.
*Predicted effect of the mutation on the full-length preprotein.
†Effect on the mature protein with the signal peptide cleaved out.
sites were variable, and all of the 105 healthy randomly few patients with either p.Arg425Cys or p.Pro439Ala, or
selected controls from FINRISK 2007 were homozygous no detectable mutation (Fig. 1). In the family with the AT
for the reference allele at every site. Dublin mutation, two family members had a clear AT
The mutations detected in type II AT-deficient patients type II deficiency, whereas two other carriers of the same
were as follows: p.Pro73Leu (AT Basel) in 37 of 42 mutation had normal AT activity and antigen values.
(88.1%) families; and p.Val30Glu (AT Dublin), p. The clinical complications reported by patients with the
Arg425Cys and p.Pro439Ala in one family each. In two AT Basel mutation are shown in Table 4. The population
families, no mutation was detected with the methods consisted of 30 probands and 58 family members. The
used. All but one (p.Val30Glu) were also confirmed to be information on age at first onset of thrombosis was avail-
unambiguously consistent with disease transmission in the able for 22 patients. The mean age at first venous throm-
pedigrees under a dominant model. None of the muta- bosis in these patients was 50 years (range: 8–64 years),
tions detected in type I patients was observed in the and that for arterial thrombosis was 45 years (range:
type II population.
AT Basel affects the heparin-binding site of the AT 100
molecule, interfering with its anticoagulant function. AT
AT activity (%) by different assays
Table 4 Clinical picture in carriers of p.Pro73Leu This mutation was first described in a single patient in
1985 [19]. Later, one patient with recurrent arterial
Clinical complication Patients, N = 88, no. (%)
thrombosis at a young age was reported to carry the same
Any 45/88 (51.1) mutation [20]. The clinical picture caused by this muta-
DVT 19/88 (21.6) tion has been unknown.
Recurrent DVT 2/19 (10.5)
Mutations affecting the heparin-binding site of the AT
Arterial thrombosis 10/88 (11.3)
Arterial thrombosis < 45 years 5/88 (5.7) molecule have previously been reported to be of low
Obstetric complications 17/49 (34.7) importance with regard to thrombotic risk [8]. However,
Recurrent obstetric complications 7/17 (41.2) our study shows that AT Basel is a malignant mutation
Pregnancies (no.) 163 causing a severe clinical picture. The overall prevalence of
Early miscarriages (before week 10) 22/163 (13.5)
either thrombosis or pregnancy complications in this pop-
Late miscarriages 7/163 (4.3)
ulation was high (51.1%). Pregnancy complications were
DVT, deep vein thrombosis. reported by 34.7% of women who had been pregnant,
with almost half of them suffering from recurrent prob-
24–67 years). No correlation between the level of AT lems. In previous reports, the rate of miscarriages has
activity and the risk of thrombosis was seen; even at lev- been lower, at ~ 20% [2]. Interestingly, the prevalence of
els near and at the lower limit of normal (80–92%), deep vein thrombosis was 21.6%, which is lower than
thrombotic complications were as prevalent as in the previously reported, but nearly 12% of the patients had
patients with very low levels of AT activity (55–69%) experienced arterial thrombosis [7]. Especially striking
(data not shown). The demographics and risk factor pro- was the high prevalence of stroke at a young age, with
file of the patients with AT Basel are shown in Table 5. nearly 6% of AT Basel carriers suffering from an ische-
No temporary risk factors at the time of thrombotic event mic stroke before the age of 45 years. This finding is
could be identified in 19 of 45 (42.2%) patients. Detailed novel, as it has been previously assumed that arterial
information on the five probands with early-onset stroke thrombosis in patients with AT deficiency is a rare phe-
is shown in Table 6. nomenon [1,2,9]. The affected individuals did not have
other significant risk factors explaining the early onset of
Discussion cerebrovascular disease, which further emphasizes the
pathogenic role of the underlying mutation. Overall, 42%
Aided by the unique genetic structure of the Finnish pop- of thrombotic events were idiopathic, which is in line with
ulation, we were able to show that inherited type II AT previous reports.
deficiency is caused, in the great majority (88%) of Finns, Patients carrying the AT Basel mutation are not
by a single founder mutation, AT Basel (p.Pro73Leu). detected with all commercially available functional assays.
This phenomenon has been reported by Cooper et al. pre-
Table 5 Patient demographics and additional prothrombotic risk viously, and has been confirmed in our study [3,16]. How-
factors in carriers of p.Pro73Leu ever, the assay principle (either thrombin-based or FXa-
based) does not appear to be decisive, but rather the test
Characteristic No. Percentage
itself. Therefore, at least in the Finnish population, it is
Age (years), median (range) 50.1 (21.9–80.7) – of paramount importance to use a screening test that is
BMI, median (range) 26.3 (18.4–43.4) – capable of reliably detecting these patients. The AT activ-
Female 64 72.7
ity level as such was not associated with the risk of
Male 24 27.3
Smoker 14 15.9 thrombosis, and even individuals with results close to
Obese (BMI > 30) 23 26.1 normal levels did have thrombotic events. On the basis of
Elevated blood pressure 17 19.3 our results, we recommend the use of STA-Sta-
High cholesterol 28 31.8 chrom AT III or Innovance Antithrombin for screening
Diabetes 4 4.5
of AT activity. Genetic testing for AT Basel in all Finnish
Malignancy 1 1.1
patients with an AT activity value below the normal limit,
BMI, body mass index. even if the result is nearly normal, seems to be justified.
The prevalence of this mutation in other countries is not
Table 6 Characteristics of the patients with stroke at a young age known; therefore, it is difficult to make recommendations
Patient 1 Female aged 35 years, smoker, no other risk factors for testing in other populations.
Patient 2 Male aged 40 years, obese (BMI 33.1), high cholesterol The clinical picture in type II AT deficiency most likely
Patient 3 Male aged 41 years, high cholesterol, febrile varies according to the underlying mutation. Our study
for unknown cause population is unique in allowing us to draw conclusions
Patient 4 Male aged 42 years, no risk factors
from a significant number of patients carrying the same
Patient 5 Female aged 45 years, no risk factors
mutation. However, a limitation of our study is that not
BMI, body mass index. all family members participated. The population is likely
to be biased towards having more clinical complications, and Standardization Committee of the International Society on
as those individuals with a more severe clinical picture Thrombosis and Haemostasis. Thromb Haemost 1997; 77: 197–
211.
may have been more prone to take part than those with
6 Antithrombin mutation database. http://www1.imperial.ac.uk/de
few or no symptoms. All patients with early-onset stroke partmentofmedicine/divisions/experimentalmedicine/haematology/
were probands. It is not possible to estimate the overall coag/antithrombin/. Accessed 15 May 2013.
risk associated with the AT Basel mutation in asymptom- 7 van Boven HH, Vandenbroucke JP, Briet E, Rosendaal FR.
atic family members, but the risk is likely to be signifi- Gene–gene and gene–environment interactions determine risk of
thrombosis in families with inherited antithrombin deficiency.
cantly higher than in the normal population.
Blood 1999; 94: 2590–4.
Furthermore, our study does not answer the question of 8 Finazzi G, Caccia R, Barbui T. Different prevalence of thrombo-
the need for primary prevention of thrombosis in the car- embolism in the subtypes of congenital antithrombin III defi-
riers of the mutation. However, it would seem reasonable ciency: review of 404 cases. Thromb Haemost 1987; 18: 1094.
to treat all known risk factors for arterial thrombosis 9 Mahmoodi BK, Brouwer JL, Veeger NJ, van der Meer J. Hered-
itary deficiency of protein C or protein S confers increased risk
aggressively in these patients. Thromboprophylaxis in
of arterial thromboembolic events at young age: results from a
high-risk situations is warranted, as suggested in the large family cohort study. Circulation 2008; 118: 1659–67.
guidelines. 10 Vossen CY, Conard J, Fontcuberta J, Makris M, van der Meer
FJ, Pabinger I, Palareti G, Preston FE, Scharrer I, Souto JC,
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Addendum thrombotic event in carriers of a familial thrombophilic defect.
The European Prospective Cohort on Thrombophilia (EPCOT).
M. Puurunen, P. Salo, S. Engelbarth, K. Javela, and M. J Thromb Haemost 2005; 3: 459–64.
Perola: contributed to the study design, collection and 11 Khor B, van Cott EM. Laboratory tests for antithrombin defi-
critical analysis of the data, and writing of the article, ciency. Am J Hematol 2010; 85: 947–50.
and approved the final version to be published. 12 van den Besselaar AM, Haas FJ, Kuypers AW. Harmonization
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Acknowledgements 13 Kristensen SR, Rasmussen B, Pedersen S, Bathum L. Detecting
antithrombin deficiency may be a difficult task – more than one
This study was funded by the Finnish Red Cross, the test is necessary. J Thromb Haemost 2007; 5: 617–18.
Foundation for Promoting Laboratory Medicine, and the 14 Odegard OR, Lie M, Abildgaard U. Antifactor Xa activity mea-
sured with amidolytic methods. Haemostasis 1976; 5: 265–75.
Research Foundation for Clinical Chemistry.
15 Rossi E, Chiusolo P, Za T, Marietti S, Ciminello A, Leone G,
De Stefano V. Report of a novel kindred with antithrombin hep-
arin-binding site variant (47 Arg to His): demand for an auto-
Disclosure of Conflict of Interests
mated progressive antithrombin assay to detect molecular
The authors state that they have no conflict of interest. variants with low thrombotic risk. Thromb Haemost 2007; 98:
695–7.
16 Javela K, Engelbarth S, Hiltunen L, Mustonen P, Puurunen M.
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