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AUROVILLE
NAME: R.PRAVEEN
STD: 12TH STD
SUBJECT: BIOLOGY
UNDER THE GUIDANCE: MRS.TAMIZHARASI
CONTENTS
1. INTRODUCTION
2. AIM
3. MATERIALS REQUIRED
4. THEORY
5. PROCEDURE
6. OBSERVATION
7. RESULT
8. CONCLUSION
9. PRECAUTIONS
INTRODUCTION
Enzyme, a substance that acts as a catalyst in living organisms, regulating the rate at which
chemical reactions proceed without itself being altered in the process. The biological
processes that occur within all living organisms are chemical reactions, and most are
regulated by enzymes. Without enzymes, many of these reactions would not take place at a
perceptible rate. Enzymes catalyze all aspects of cell metabolism. This includes the digestion
of food, in which large nutrient molecules (such as proteins, carbohydrates, and fats) are
broken down into smaller molecules; the conservation and transformation of chemical
energy and the construction of cellular macromolecules from smaller precursors. Many
inherited human diseases, such as albinism and phenylketonuria, result from a deficiency of
a particular enzyme. Enzymes are built of proteins folded into complicated shapes, they are
present throughout the body.The chemical reactions that keep us alive - our metabolism on
the work that enzymes carry out.Enzymes speed up (catalyze) chemical reactions; in some
cases, enzymes can make a chemical reaction millions of times faster than it would have
been without it .A substrate binds to the active site of an enzyme and is converted into
products. Once the products leave the active site, the enzyme is ready to attach to a new
substrate and repeat the process.
Enzymes also have valuable industrial and medical applications. The fermenting of wine,
leavening of bread, curdling of cheese, and brewing of beer have been practiced from earliest
times, these reactions understood to be the result of the catalytic activity of enzymes. Since
then, enzymes have assumed an increasing importance in industrial processes that involve
organic chemical reactions. The uses of enzymes in medicine include killing disease-causing
microorganisms, promoting wound healing, and diagnosing certain diseases.
Early Enzyme Discoveries
The existence of enzymes has been known for well over a century. Some of the earliest
studies were performed in 1835 by the Swedish chemist Jon Jakobe Berzelius who termed
their chemical action catalytic. It was not until 1926, however, that the first enzyme was
obtained in pure form, a feat accomplished by James B. Sumner of Cornell University.
Sumner was able to isolate and crystallize the enzyme urease from the jack bean. His work
was to earn him the 1947 Nobel Prize.
John H. Northrop and Wendell M. Stanley of the Rockefeller Institute for Medical Research
shared the 1947 Nobel Prize with Sumner. They discovered a complex procedure for
isolating pepsin. This precipitation technique devised by Northrop and Stanley has been used
to crystallize several enzymes.
Chemical Nature
All enzymes were once thought to be proteins, but since the 1980s the catalytic ability of
certain nucleic acids, called ribozymes (or catalytic RNAs), has been demonstrated. A large
protein enzyme molecule is composed of one or more amino acid chains called polypeptide
chains. The amino acid sequence determines the characteristic folding patterns of the
protein’s structure, which is essential to enzyme specificity. If the enzyme is subjected to
changes, such as fluctuations in temperature or P H, the protein structure may lose its integrity
(denature) and its enzymatic ability.
Bound to some enzymes is an additional chemical component called a cofactor, which is a
direct participant in the catalytic event and thus is required for enzymatic activity. A cofactor
may be either a coenzyme an organic molecule, such as a vitamin or an inorganic metal ion;
some enzymes require both. A cofactor may be either tightly or loosely bound to the
enzyme. If tightly connected, the cofactor is referred to as a prosthetic group.
Enzymes mechanism of action
The digestive system - enzymes help the body break down larger complex molecules
into smaller molecules, such as glucose, so that the body can use them as fuel.
DNA replication - each cell in your body contains DNA. Each time a cell divides, that
DNA needs to be copied. Enzymes help in this process by unwinding the DNA coils
and copying the information.
Liver enzymes - the liver breaks down toxins in the body. To do this, it uses a range of
enzymes.
Enzymes can only work in certain conditions. Most enzymes in the human body work
best at around 37°C - body temperature. At lower temperatures, they will still work but
much more slowly.
If the temperature is too high or if the environment is too acidic or alkaline, the enzyme
changes shape; this alters the shape of the active site so that substrates cannot bind to it
- the enzyme has become denatured.
Structure of enzymes
Enzymes always act as catalysts and small quantities compared to their substrate are required
to considerably increase the rate of chemical reactions, wherein the enzymes themselves
experience no overall change .An enzyme does not alter the ultimate equilibrium position of
a reaction, which is thermodynamically determined, thus merely the rate of completion of
equilibrium of a feasible reaction is augmented. In addition to catalytic properties, enzymes
exhibit the physico-chemical behaviour of proteins: their solubility, electrophoretic
properties, electrolytic behaviour and catalytic action of enzymes is determined by the linear
chain of amino acid residues linked via peptide bonds, which constitute a protein molecule.
Localized folding of the primary structure is called a secondary structure, whereas the
complete folding of the molecule is known as a tertiary structure. In contrast to these
structural configurations, a quaternary structure is the agglomeration of several folded
chains. The structural features of enzymes. In contrast to traditional chemical catalysts, e.g.
hydrogen ions, heavy metals or metal oxides, which are most effective in organic solvents, at
very high temperatures or at extreme pH values, enzymes operate most efficiently under very
mild conditions. When using enzymes, there are certain issues that require attention, such as
deviation from homogeneous aqueous solutions, physiological P H and temperature, which
can rapidly destroy enzyme activity. Under normal conditions the increase in reaction rate is
rarely matched by their non-protein counterparts.
STRUCTURE OF ENZYME
Nomenclature
An enzyme will interact with only one type of substance or group of substances, called the
substrate, to catalyze a certain kind of reaction. Because of this specificity, enzymes often
have been named by adding the suffix “-ase” to the substrate’s name (as in urease, which
catalyzes the breakdown of ureurea. A classification system has been developed based on the
type of reaction the enzyme catalyzes. There are six principal categories and their reactions:
(1) Oxidoreductases, which are involved in electron transfer
(2) Transferases, which transfer a chemical group from one substance to another
(3) Hydrolases, which cleave the substrate by uptake of a water molecule (hydrolysis)
(4) Lyases, which form double bonds by adding or removing a chemical group
(5) Isomerases, which transfer a group within a molecule to form an isomer
(6) Ligases, or synthetises, which couple the formation of various chemical bonds to the
breakdown of a pyrophosphate bond in adenosine triphosphate or a similar nucleotide.
This flexibility is essential to how enzymes bind to other molecules and cause
chemical reactions to happen on those molecules. Lowering the temperature slows the
motion of molecules and atoms, meaning this flexibility is reduced or lost. As
the temperature decreases, so does enzyme activity
ii. Non-competitive inhibition occurs when an inhibitor binds to the enzyme at a location
other than the active site. In some cases of non-competitive inhibition, the inhibitor is
thought to bind to the enzyme in such a way as to physically block the normal active
site. In other instances, the binding of the inhibitor is believed to change the shape of
the enzyme molecule, thereby deforming its active site and preventing it from reacting
with its substrate. This latter type of non-competitive inhibition is called allosteric
inhibition; the place where the inhibitor binds to the enzyme is called the allosteric
site. Frequently, an end-product of a metabolic pathway serves as an allosteric
inhibitor on an earlier enzyme of the pathway. This inhibition of an enzyme by a
product of its pathway is a form of negative feedback.
to the active site region. When low molecular weight compounds interfere with the
activity of enzymes by partially reducing or completely inhibiting the enzyme activity
either reversibly or irreversibly, it is known as enzyme inhibition. The compounds
responsible for such inhibition are called enzyme inhibitors. To protect the enzyme
catalytic site from any change, a ligand binds with a critical side chain in the enzyme.
Chemical modification can be performed to test the inhibitor for any drug value.
Studies of enzymes can yield much information about the following:
Cofactors
Some enzymes cannot function unless they have a specific non-protein molecule attached to
them. These are called cofactors. For instance, carbonic anhydrase, an enzyme that helps
maintain the pH of the body, cannot function unless it is attached to a zinc ion.
Advantages of using enzymes
• A number of drugs useful in medicine, which seem to function because they can inhibit
certain enzymes in malfunctioning cells.
• The convenience of elucidating metabolic pathways in cells.
• The mechanism of the catalytic activity.
• The nature of the functional group at the active site.
The substrate specificity of the enzyme.
The pharmacological action of drugs is mainly based on enzyme inhibition, e.g.
sulphonamides and other antibiotics. In the majority of cases the enzyme inhibited is known.
The development of nerve gases, insecticides and herbicides is based on enzyme inhibition
studies. There are two major types of enzyme inhibition: reversible and irreversible.
Enzyme Kinetics
Enzyme kinetics is the study of the chemical reactions that are catalysed by enzymes. In
enzyme kinetics, the reaction rate is measured and the effects of varying the conditions of the
reaction are investigated. Studying an enzyme's kinetics in this way can reveal the catalytic
mechanism of this enzyme, its role in metabolism, how its activity is controlled, and how
a drug or an agonist might inhibit the enzyme.
Enzymes are usually protein molecules that manipulate other molecules—the
enzymes' substrates. These target molecules bind to an enzyme's active site and are
transformed into products through a series of steps known as the enzymatic mechanism
E + S ⇄ ES ⇄ ES* ⇄ EP ⇄ E + P
Enzyme factors
This represents saturation, and the reaction rate is at its maximum and is designated Vmax.
Other factors that influence enzyme activity include P H and temperature. Most mammalian
enzymes operate maximally at around physiological P H and body temperature. The stomach
digestive enzyme pepsin works best at around PH 2.0, the approximate PH of the stomach.
Bacteria found in hot springs have enzymes that operate at or near the boiling point of water.
In most cases, however, extremes of P H or temperature will destroy enzymes in an enzyme-
unfolding process known as denaturation.
MATERIALS REQUIRED
Test tube standard, test tubes, tape, breakers, pipette, water bath, thermometer, spirit
lamp,biuret reagent, phenolphthalein, Iodine, heavy metal ions (like AgNO3,HgCl),
H2O2,urea and starch
THEORY
Enzymes are biocatalysts that influence biochemical reaction rates without altering the
equilibrium of reaction. Enzymes work upon lock and key mechanism.
Properties of enzymes:
1. They are proteinaceous, biocatalysts.
2. Enzymes are specific in nature.
3. They exhibit inhibition by heavy metals
4. Their activity depends on temperature
5. Their activity depends on P
PROCEDURE
1. For demonstrating proteinaceous nature:
Biuret reagent gives test with peptide bonds and proteins have peptide bonds.
2ml Enzymes +2ml biuret reagent = violet
Bluish colour indicates proteinaceous nature .Higher is the concentration of proteins
darker is the colour
In one test tube take 2 ml of unboiled enzyme at room temperature and in another test
tube take 2 ml of boiled catalase enzyme. In both the tubes add 2 ml H2O and study
the appearance of froth.
OBSERVATION
1. Proteinaceous nature:
Violet are bluish colour indicates protein nature of enzymes
4. Effect of Temperature:
Froth appears in first test tube with unboiled enzyme and no froth is seen in second
test tube because enzyme gets denatured at high temperature.
5. Effect of pH:
First test tube with normal pH shows appearance of froth but second test tube does not
shows froth because of change in PH the enzymes has been inactivated.
RESULT
The various tests demonstrate the above stated properties of enzymes.
CONCLUSION
The rate of a chemical reaction increases as the substrate concentration increases. Enzymes
can greatly speed up the rate of a reaction. However, enzymes become saturated when the
substrate concentration is high. The reaction rate depends on properties of the enzymes, the
enzyme concentration (E) .Enzymes work best at optimal P H. Just like PH, enzymes perform
at their best in a small range of temperature. These biological catalyst increase the rate of
reaction when exposed to the optimum temperature and would underperform when
temperature is lower or higher than the optimal temperature are introduced. Enzymes remain
active at optimal PH and temperature. Enzymes are used in various fields which benefit
humans in day to day life.
PRECAUTIONS
1. Equal amounts of enzymes and substrate should be taken.
2. Boiled enzymes should be cooled to room temperature before adding substrate.