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Open Access Macedonian Journal of Medical Sciences. 2022 Aug 27; 10(A):1471-1477.
https://doi.org/10.3889/oamjms.2022.10558
eISSN: 1857-9655
Category: A - Basic Sciences
Section: Pharmacolgy Since 2002
Abstract
Edited by:Sinisa Stojanoski BACKGROUND: Anti-aging agents contribute to the prevention and control of skin photoaging. Antioxidant
Citation: Syamsul ES, Umar S, Wahyuni FS, Martien
R, Hamidi D. Anti-aging Activity, In Silico Modeling and
containing cosmetic has anti-aging therapy that can inhibit free radical formation. Sonneratia caseolaris leaf extract
Molecular Docking from Sonneratia caseolaris. Open has robust antioxidant activity.
Access Maced J Med Sci. 2022 Aug 27; 10(A):1471-1477.
https://doi.org/10.3889/oamjms.2022.10558 AIM: This study aimed to determine the anti-aging activity in-silico and in-vitro.
Keywords: Anti-aging; Docking molecular; In-silico; In
vitro; Sonneratia caseolaris METHODS: In vitro antioxidant potential was evaluated by 2,2-diphenyl-1-picrylhydrazyl (DPPH), 2,2-Azino-bis-(3-
*Correspondence: Dachriyanus Hamidi, Faculty of
Pharmacy, Universitas Andalas, Padang, West Sumatera, ethylbenzothiazoline-6-sulfonate) cation (ABTS+) radical scavenging and FRAP. Investigation of in-silico docking
Indonesia. E-mail: dachriyanus@phar.unand.ac.id activity was done for ROS (3ZBF), collagenase (966C), hyaluronidase (1FCV) receptors. Metabolomics analysis
Received: 27-Jun-2022
Revised: 06-Jul-2022 were conducted through HR-LCMS on the extract Sonneratia caseolaris. To explore the use value of antiaging, we
Accepted: 17-Aug-2022 analyzed the molecular docking of metabolites profiling Sonneratia caseolaris.
Copyright: © 2022 Eka Siswanto Syamsul, Salman Umar,
Fatma Sri Wahyuni, Ronny Martien, Dachriyanus Hamidi RESULTS: The result of metabolite profiling on the HR-LCMS from Sonneratia caseolaris extract are Luteolin, Betaine,
Funding: This study was supported by the Ministry of
Education, Culture, Research, and Technology through and Choline. Molecular docking involves the exploration of protein or nucleotide, 3D structural modeling, and binding
DRTPM DIKTI Grant-in-Aid 086/E5/PG.02.00.PT/2022 energy calculation. DPPH method showed IC50 28.214±0.809 ppm. The ABTS method showed IC50 1.528±0.042 ppm
through LPPM Universitas Andalas (no.: T/30/UN.16.17/
PT.01.03/PPS-PDD-Kesehatan/2022) and FRAP is 345,125±4,196 mM/g sample. The compound luteolin had the Lowest binding energy scores with most
Competing Interests: The authors have declared that no of the target proteins: ROS (-8,3), collagenase (-11), and hyaluronidase (-6,8), according to molecular docking results.
competing interests exist
Open Access: This is an open-access article distributed CONCLUSION: It concluded that the study indicates extract Sonneratia caseolaris has the potential to be developed
under the terms of the Creative Commons Attribution-
NonCommercial 4.0 International License (CC BY-NC 4.0) as a new drug for antiaging.
The leaves were cleaned, separated, and then Inhibition percentages (%) = [(blank absorbance-
dried. After that, it is ground into a fine powder. The sample absorbance)/blank absorbance]×100
ground samples were sieved to get uniform particle Furthermore, in calculating the percentage
size, then kept in an air-tight container and stored until value of inhibition, a linear equation was made to
further analysis. determine the IC50 value, which was the radical
inhibitory activity. The result is the IC50 value which is
then categorized.
Extraction
As many as 100 g of powdered S. caseolaris
leaves were put in a maceration container and added ABTS (2,2’- azino-bis(3-ethylbenzothiazoline-
the ethanol 95% until the simplicia was submerged. 6-sulfonic acid)
Put aside it for 24 h and stir occasionally. The simplicia
To begin with, 7.4 mM ABTS solution was
filtered and separated from the dregs. Furthermore, the
made with 203 mg of ABTS powder and then dissolved
dregs were macerated again using a new ethanol filter.
with distilled water to 50 mL. Afterward, prepare a
It was conducted for 3 consecutive days. The ethanol
solution by weighing 64.8 mg of potassium persulfate
95% extract of sansevieria leaves was concentrated by
powder dissolved in 50 mL of distilled water. Mix it
a rotary evaporator [7].
well while homogenizing, then store the solution to
avoid light. The solution that has been formed is the
ABTS stock solution [10]. The dilution was performed
Determination of total phenolics contents
50 times by taking 200 µL of a mixture of ABTS stock
Total phenolics content was determined using solution and potassium persulfate and then diluting
Folin–Ciocalteu reagent adapted from [8] with slight with ethanol to 10 mL. This solution is called the ABTS
modifications. The Folin–Ciocalteu reagent (previously control. The absorbance of the ABTS control was read,
diluted 10-fold with distilled water) 2.25 ml was mixed while the ABTS control blank was ethanol. Prepared
with 300 ml of extract and set aside at room temperature sample solution and sample blank by dissolving 25 µL
for 5 min, then added 2.25 ml of sodium carbonate of sample into a test tube and then adding 4975 µL of
(60 g/l) solution. After 90 min, the absorbance was ABTS control. Homogenization was conducted with a
measured at 725 nm using a spectrophotometer. The vortex for 1 min, and then incubated for 17 min. The
results were expressed as equivalent of mg gallic acid sample blank used was 25 µL of sample added to 4975
in 1 g of dried sample (mg GAE/g). µL of ethanol, then homogenized with a vortex for 1 min.
Let it stand for 30 min to observe the absorption that
occurred at each concentration, and then the radical
Physicochemical examination inhibitory activity was calculated. The final result was
Physicochemical examination of the calculated as IC50.
standardized extract was identified using the high
resonance mass spectrophotometer (HRMS).
FRAP (Ferric reducing/antioxidant power)
assay
Diphenyl-2-picrylhydrazyl (DPPH) free- The procedure was adopted from [11]. To
radical scavenging assay begin, prepare a 10:1:1 mixture of 300 mM acetate
The antioxidant activity was estimated using 1,1- buffer (pH 3.6), 10 mM 2,4,6-tripyridyl-s-triazine (TPTZ)
DPPH as a free radical model. This method was adapted solution, and 20 mM FeCl3–6H2O in a water bath
from [9]. The antioxidant activity test was conducted by and heat to 37°C. A total of 3.0 mL FRAP reagent was
making a 40 ppm DPPH solution, in which 0.004 g of added to a test tube, and a blank reading was acquired
DPPH added ethanol to 100 ml, then from 2 ml of the with a spectrophotometer at 593 nm. The cuvette was
40 ppm DPPH solution, the absorption was observed filled with 100 L of selected plant extracts and 300 L of
in the range of 450–600 nm to determine the maximum distilled water. After 90 min of incubation at 37°C in a
wavelength. The ascorbic acid standard was used as a water bath, a second reading at 593 nm was performed
positive control using several concentrations ranging after adding the sample to the FRAP reagent. The
from 5 to 15 ppm. Preparation of standardized extracts change in absorbance after 90 min from the initial
obtained concentrations of 10–50 ppm, set aside for blank was compared with the standard curve. Standard
30 min to observe the absorption at each concentration. concentrations of Fe (II) were known using several
Then determine the absorbance by adding DPPH, that is, concentrations ranging from 100 to 1000 M. A standard
from each concentration series, 2 ml pipetted, and 4 ml of curve was then developed by plotting the FRAP value
40 ppm DPPH solution. Set aside it for 30 min to observe of each standard versus its concentration. The result
the absorption at each concentration, and then calculate expressed the concentration of antioxidants that can
the free radical inhibitory activity using the formula: reduce iron in a 1 gram sample (µM/g).
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Syamsul et al. Anti-aging Activities of Sonneratia Caseolaris
Molecular docking studies were performed for three DPPH: Diphenyl‑1‑picrylhydrazyl, ABTS: Azino‑bis‑(3‑ethylbenzothiazoline‑6‑sulfonate.
target proteins (collagenase (966C), ROS (3ZBF), and Although the mechanism of action of DPPH
hyaluronidase (1FCV)) using Autodock Vina software. (cation radical scavenging) and FRAP (iron ion reduction)
is different, the results of these two assays correlated
significantly in all samples tested. The FRAP assay is the
only test that directly measures antioxidants or reducing
Results and Discussion agents in a sample. It measures the reducing ability of
antioxidants that react with ferric tripyridyltriazine complex
(Fe3+–TPTZ) and produce ferrous (Fe2+–TPTZ)
HRMS results show structure A (Formula: C15 [11], [17]. The results are expressed as the combined
H10 O6, Molecular Weight: 286,047, RT [min]: 7,717, concentrations of all electron-donating reducing agents
Area (Max.): 40366144,37, mz Cloud Best Match: 99,7 is occurring in the sample in the various sample plants.
Luteolin), B (Formula: C5 H11 N O2, Molecular Weight: The ability to reduce the tested extract from S. caseolaris
117,079, RT [min]: 0,903, Area (Max.): 143657529,38, leaves as shown in Table 2. It significantly correlated
mz Cloud Best Match: 96,7 is Betaine), C (Formula: C5 with phenolic (p < 0.05). Antioxidant capacity by both
H11 N O2, Molecular Weight: 117,079, RT [min]: 0,903, tests was more strongly correlated with total phenolics
Area (Max.): 143657529,38, mz Cloud Best Match: [18], [19]. Studies from Kim et al. [19] found that the
96,7 is Choline) antioxidant capacity measured by the ABTS test was
highly significantly correlated with total phenolics. These
S. caseolaris Leaves extract contains sterol
findings indicate that phenolic compounds are significant
hydrocarbons, fatty acid compounds, luteolin, betain,
contributors to antioxidants.
Open Access Maced J Med Sci. 2022 Aug 27; 10(A):1471-1477. 1473
A - Basic Sciences Pharmacolgy
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Syamsul et al. Anti-aging Activities of Sonneratia Caseolaris
Table 2: FRAP and Total Phenolic the hydrogen bond interactions related to the residues
Sample Rep FRAP Total Phenolic LYS1980, ALA1978, LEU2026, LEU2086, VAL1959,
Concentration Average ± SD Concentration Average ± SD MET2029, and LEU1951 in ROS enzyme, LEU235,
(mM/g sample) (mg GAE/g)
Extract 1 349.425 345.125 ± 4.196 206.0632 204.3408 ± 1.7224 SER239, VAL215, HIS218, and LEU181 in collagenase
2 339.433 200.896 and ASP111, GLU1113 and Tyr 55 for hyaluronidase.
3 346.517 206.0632
FRAP: Ferric reducing/antioxidant power. A molecular docking study was conducted to assume
the model where the protein and ligand were considered
The data were then cleaned up by removing
rigid and flexible during the docking procedure [21].
any co-crystallized ligand and crystallographic water.
Unfortunately, the sameness in the estimated docking
Molecular docking simulation was carried out with
score, number of H-bonds, interacting residues, and
AutoDock Vina’s default settings (Vina). The best-
bond length are shown in Table 3. The reason there
docked conformation determined by vina scoring was
why there is a limitation of the docking model for how
employed for the visual analysis [20]. Pose View, a
the compounds could arrive at the active site. The
program available through Protein PDB, was used to
procedure starts with the active ligand at the site in all
infer the intermolecular interactions of the protein-ligand
the molecular docking experiments.
combination.
The molecular docking of phytochemical
To propose a molecular-level explanation
compounds showed in Figure 2: ROS (3ZBF), Figure 3:
of ROS, collagenase, and hyaluronidase inhibition
Collagenase (966 C) and Figure 4: Hyaluronidase
enzymes by the best inhibitors (luteolin, docking scores
are –8,3, –11, and –6,8). Luteolin principally attributed to
a
a
b
b
c
c
d d
Figure 3: Molecular docking of Collagenase (966C) with (a) Native, Figure 4: Molecular docking of Hyaluronidase (1FCV) with (a) Native,
(b) Betain, (c) Choline, (d) Luteolin (b) Betain, (c) Choline, (d) Luteolin
Open Access Maced J Med Sci. 2022 Aug 27; 10(A):1471-1477. 1475
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Syamsul et al. Anti-aging Activities of Sonneratia Caseolaris
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