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positive negative
Serological identification: slide agglutination with specific
antibodies against the 'O'-, 'K'-, and 'H'-antigens.
'O'-ag = outermost part of the bacterial LPS, consisting of
polysaccharide, resistant to heat and alcohol, and usually
detected by bacterial agglutination. anti-O antibodies are mainly
IgM in nature.
'K'-ag= external to 'O'-ag, polysaccharide in E.coli, may be
associated with virulence (K1 - meningitis in infancy, some other
types - attachment to epithelial cells prior urinary tract invasion)
'H'-ag = located on the flagella and can be denatured or
removed by heat and alcohol. Anti-H antibodies are mainly IgG
in nature.
Indirect or passive agglutination assays utilize antigen coupled to particles or
beads composed of an inert material (e.g. latex, colloidal gold,..)
Weil-Felix: Rickettsia
Ag: Proteus OX19, OX2, OXK
Ab:patient serum
Diagnostic cut-off titer: 1:800
Diameter2
Antigen concentration
Immunelectropho-
resis (the antigens
separated in the
electric field react
with the specific
antibody providing
precipitation)
ICT – immunochromatography test
II. Indirect methods
Unknown
antigen
(bacteria)
Antibody of
known antigen
Fluorescent
dye
Automatization!
Additional comments
The ELISA is probably the most commonly used immunological
assay because of its versatility,
sensitivity (ability to detect small amounts of antigen or antibody),
specificity (ability to discriminate between closely related but
antigenically different molecules),
and ease of automation.
- sensitivity: 1 mL Ab/mL
Negative: red blood cells are lysed
Toxin molecules
Antitoxin: antibody neutralized toxin and intact cell
for toxin
Why we use serological reactions?
Aim:
Note well:
Titre = reciprocal of the highest rate of dilution at which the given reaction
still gives a visible/detectable result
/Immunoassays report results as absorbance values, optical densities, or
international units/
Typically, as the IgM decreases, the IgG level will increase => by the end of the
2. or 3. month, only IgG class antibody is detectable
! pregnant women
T. gondii, rubella, CMV
Typing techniques
Pulsed-field gel electrophoresis (PFGE)
DNA will be extracted from
bacteria, cleaved with enzymes
and run in agarose gel.
The position of the positive and
negative poles will be changed
several times during running
that will allow better band
separation.
If strains differ in at least two
bands they are considered
distinct. PFGE assay of Pseudomonas aeruginosa
isolates /1-7: nosocomial outbreak/
Advantage: a very sensitive technique; allows the separation of closely related
isolates. Excellent for the investigation of individual outbreaks.
Drawbacks:
- assays done in different laboratories can not always be compared
- too sensitive for the comparison of strains isolated in geographically distant locations
or between considerable time intervals.
Macrorestriction pattern of SHV-type β-
lactamase producing klebsiella isolates
Typing techniques based on nucleotide sequencing I.
Multi locus sequence typing (MLST)
Six or seven genes of the bacterium are selected sequenced
and the sequences compared
All bacteria belonging to the species must carry the selected
genes. (Housekeeping genes are selected.)
The evolutionary changes in the selected genes should not be
either too fast or too slow.
Advantages:
- gives unequivocal results; results obtained in various laboratories can be
compared
- appropriate for the comparison of strains isolated in distant geographical
locations or between considerable time intervals
- it can usually be performed also directly from sample
Drawback: not sufficiently sensitive for the investigation of individual outbreaks
MLS typing of selected klebsiellae strains
isolated in Hungary
Result of Alleles Seq.
PFGE typing type
rpoB gapA mdh pgi phoE infB tonB
HECIa (n=4) 1 1 1 1 1 1 1 15
HECIb (n=1) 1 1 1 1 1 1 1 15
EC II (n=3) 4 3 6 1 7 4 38 147
EC III (n=2) 1 3 1 1 1 3 4 11
Typing techniques based on nucleotide sequencing II.
„Spa” typing
Spa: Staphylococcus protein A
Principle: sequencing and comparison of a single gene; the protein A
gene of S. aureus (protein A is a major virulence factor on the surface of
S. aureus)
The sensitivity of spa typing is lower than that of MLST, however, it
allows an appropriate separation of S. aureus strains and is much
cheaper than MLST
Sequencing of total bacterial genome