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Phylogeny
Clade
20H (Beta, V2) 21L (Omicron)
20I (Alpha, V1) 21M (Omicron)
20J (Gamma, V3) 22A (Omicron)
21A (Delta) 22B (Omicron)
21I (Delta) 22C (Omicron)
21J (Delta) 19A
21B (Kappa) 19B
21C (Epsilon) 20A
21D (Eta) 20C
21F (lota) 20G
21G (lambda) 20E (EU1)
21H (Mu) 20D
21K (Omicron) 20F
*Glycosylation deletion with either N331Q or N343Q resulted in 3- to 20- fold reductions in infectivity, respectively, whereas removal of both glycosylation sites
(N331Q + N343Q) resulted in 1200-fold reduction; suggests these sites may be involved in receptor binding or RBD conformation.
Li. Cell. 2020;182:1284. Slide credit: clinicaloptions.com
Omicron Variant (B.1.1.529)
Omicron Variant
Changes in Omicron Variant
Delta Omicron
≥30 amino acid changes in the spike
protein
Antivirals target the replicase
‒ nsp5 protease: single coding
change nowhere near the active
site
‒ nsp12 polymerase: single coding
change, already dominant mutation
compared with the original Wuhan
strain
Kumar. J Med Virol. 2022;94(4).1641. cdc.gov/coronavirus/2019-ncov/science/science-briefs/scientific-brief-omicron-variant.html.
Shah. Front Immunol. 2022; [Epub online ahead of print]. Slide credit: clinicaloptions.com
Updated
Omicron: Transmissibility United States: April 24, 2022 – July 30, 20223
Delta B.1.617.2 Omicron BA.4.6 Omicron BA.1.1.529
Omicron BA.5 Omicron BA.2.12.1 Omicron BA.1.1
Omicron spreads rapidly1,2 100
Omicron BA.4 Omicron BA.2 Other
Nowcast
5/7
5/14
5/21
5/28
6/4
6/11
7/9
7/30
4/30
6/18
6/25
7/2
7/16
7/23
‒ Immune evasion
1. Lyngse. medRxiv. 2021;[Preprint]. Note: This study has not been peer reviewed. Collection Date (Wk Ending)
2. cdc.gov/coronavirus/2019-ncov/variants/omicron-variant.html.
3. covid.cdc.gov/covid-data-tracker/#variant-proportions. Slide credit: clinicaloptions.com
Omicron: Infectiousness
Anterior nares and oropharyngeal COVID-19 testing samples from NBA players
Omicron Delta
Peak Viral Concentration Proliferation Time Clearance Time
20 10.0 10.0
8
7.5 7.5
Days
25 7 5.0 5.0
6 2.5 2.5
0 0
Compared with delta, omicron had lower peak viral load and shorter clearance time
‒ Unclear whether these characteristics are inherent to the variant or other population
factors (eg, number of vaccine doses)
Hay. medRxiv. 2022;[Preprint]. Note: This study has not been peer reviewed. Slide credit: clinicaloptions.com
Omicron: Disease Severity
Omicron replicates faster in the To understand intrinsic severity
bronchi but less efficiently in the of omicron compared with
lung1,2 delta, need to adjust for:
‒ Less lung replication may be ‒ Vaccination status
associated with reduced disease
severity ‒ Prior infection
Disease Disease
Mild Severe
0
South West Midlands North East and Yorkshire
1.00
0.75 Public Health of
0.50
0.25 England reported an
0
Scotland North West Wales
estimated increase in
1.00
0.75
Rt of 0.74 (95% CI:
0.50 0.44-1.29) by random
0.25
0 effect Bayesian
semi-mechanistic
Jan
Jan
Mar
Mar
Mar
May
May
Sep
Nov
Sep
Nov
Mar
Jul
Jul
Jan
Mar
May
Nov
Sep
Mar
Jul
1. Public Health England. SARS-CoV-2 variants of concern and variants under investigation in England, Technical briefing 7. March 11, 2021.
2. ECDC. SARS-CoV-2 increased circulation of variants of concern and vaccine rollout in the EU/EEA, 14th update. February 15, 2021. Slide credit: clinicaloptions.com
Neutralization of B.1.1.7 SARS-CoV-2 Pseudovirus
by BNT162b2-Elicited Sera
Assessed neutralization of B.1.1.7 Neutralization by BNT162b2-Elicited Sera
and Wuhan lineage SARS-CoV-2 GMTs and 95% CIs are indicated
spiked VSV pseudoviruses by sera 2560
P <.01
23-55 yr of age
from participants who received the 1280
57-73 yr of age
COVID-19 mRNA vaccine BNT162b2 640
in a phase I/II trial (N = 40) 320
pVNT50
‒ Assessed 7 or 21 days after second 160
dose via 50% neutralization assay 80
No. of Mutations
~1400 cases as of February 11, 2021 20 20
B.1.1.54
B.1.1.56
C.1
B.1.1.54
C.1
S.501Y.V2
S.501Y.V2
B.1.1.56
Designated a VBM on September 21, 20214
1. ECDC. Risk related to the spread of new SARS-CoV-2 variants of concern in the EU/EEA – first update. January 21, 2021. Variant
2. ECDC. SARS-CoV-2 increased circulation of variants of concern and vaccine rollout in the EU/EEA, 14th update. February 15, 2021.
3. Tegally. Nature. 2021;592:438. 4. CDC: SARS-CoV-2 variant classifications and definitions.
cdc.gov/coronavirus/2019-ncov/variants/variant-classifications.html. Last updated April 26, 2022. Slide credit: clinicaloptions.com
Spread of 501Y.V2 Variant (B.1.351)
Assessment of 2882 SARS-CoV-2 Frequency of Circulating Variants in
South Africa Over Time1
genomes from samples in South 1.00
Africa collected between March
Proportion of Genomes
and December 20201 0.75
30-Nov
9-Mar
6-Apr
20-Apr
4-May
18-May
14-Dec
10-Aug
24-Aug
16-Nov
24-Feb
1-Jun
15-Jun
29-Jun
7-Sep
23-Mar
27-Jul
5-Oct
19-Oct
21-Sep
2-Nov
13-Jul
than 300 genomes of 501Y.V2
had been identified2 Date
Lineages B.1.1.54 B.1.1.56 C.1 501Y.V2 Others
1. Tegally. Nature. 2021;592:438-43. 2. Africa CDC. Alert notification: new SARS-
CoV-2 variant with multiple spike protein mutations. December 21, 2020. Slide credit: clinicaloptions.com
Escape of B.1.351 From Neutralization by
Convalescent Plasma
Assessed neutralization of live
virus grown from July 2020 IC50
sample and two B.1.351 virus Plasma donor: 1st wave B.1.351 Ratio
200
samples by plasma from persons 1 0.004312 KO* ND
Kupferschmidt, Wadman, Science 6/24/21. CDC: SARS-CoV-2 variant classifications and definitions.
cdc.gov/coronavirus/2019-ncov/variants/variant-info.html. Last updated April 26, 2022. Slide credit: clinicaloptions.com
Delta Variant: What We Know
1. Grint. Clin Infect Dis. 2021;[Epub]. 2. Collier. Nature. 2021;593:136. 3. Wu. NEJM. 2021;384:1468. 4. Nature. 2021;593:266.
5. cdc.gov/coronavirus/2019-ncov/variants/delta-variant.html. 6. cdc.gov/coronavirus/2019-ncov/variants/variant-info.html.
7. Grannis. MMWR Morb Mortal Wkly Rep. 2021;70:1291. 8. Mlcochova. Nature. 2021;599:114. Slide credit: clinicaloptions.com
Effectiveness of COVID-19 Vaccines Against Variants
First data were available for BNT162b2 (Pfizer-BioNTech) mRNA vaccine
1. Stowe. khub.net/web/phe-national/public-library/-/document_library/v2WsRK3ZlEig/view/479607266.
2. Lopez Bernal. NEJM. 2021;385:585. Slide credit: clinicaloptions.com
US COVID-19 Vaccines in Delta Era:
Comparative Efficacy
Vaccine effectiveness against COVID-19–associated hospitalization among adults without immunocompromising conditions
Data represents 21 hospitals in 18 US states, March 2021 through August 2021
VE Against COVID-19 Hospitalization
Vaccinated Patients/Total Patients (%) (95% CI)
Vaccine/Period
Case Patients Control Patients
mRNA-1273 VE after full vaccination
Full surveillance period 54/1517 (3.6) 422/1321 (31.9) 93 (91-95)
14-120 days after full vaccination 36/1499 (2.4) 345/1244 (27.7) 93 (90-95)
>120 days after full vaccination 18/1481 (1.2) 77/976 (7.9) 92 (87-96)
BNT162b2 VE after full vaccination
Full surveillance period 128/1591 (8.0) 610/1509 (40.4) 88 (85-91)
14-120 days after full vaccination 65/1528 (4.3) 495/1394 (35.5) 91 (88-93)
>120 days after full vaccination 63/1526 (4.1) 115/1014 (11.3) 77 (67-84)
Ad26.COV2.S VE after full vaccination
Full surveillance period 37/1500 (2.5) 76/975 (7.8) 71 (56-81)
>28 days after full vaccination 33/1496 (2.2) 59/958 (6.2) 68 (49-80)
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Anti-RBD IgG Anti-spike IgG
After delta became the most common variant, fully vaccinated people had reduced risk of…
5x >10x >10x
Comparison is to people not fully vaccinated
Based on data from June 20 - July 17, 2021
1. ECDC. SARS-CoV-2 increased circulation of variants of concern and vaccine rollout in the EU/EEA, 14th update. February 15, 2021.
2. GISAID. gisaid.org/hcov19-variants/. Accessed December 10, 2021. 3. who.int/publications/m/item/weekly-epidemiological-update-on-covid-19---
7-december-2021 4. CDC. Science brief: emerging SARS-CoV-2 variants. Last updated January 28, 2021. 5. CDC: SARS-CoV-2 variant classifications and
definitions. cdc.gov/coronavirus/2019-ncov/variants/variant-info.html. Last updated April 26, 2022. Slide credit: clinicaloptions.com
Implications of SARS-CoV-2 Variants
Neutralization of SARS-CoV-2 Variant
Pseudoviruses by mRNA Vaccine-Elicited Plasma
Assessed neutralization of Neutralization by mRNA Vaccine-Elicited Plasma
SARS-CoV-2 spiked HIV-1 mRNA-1273 BNT162b2
pseudoviruses by plasma from NS P = .0002 P = .0033 P <.0001
participants who received the 104
BNT162b2 (n = 6) or mRNA-1273
(n = 14) COVID-19 vaccines 103
NT50
‒ Average time from second 102
vaccine to sample collection:
8 wk (range: 3-14 wk) 101
WT K417N WT N501Y WT E484K WT K417N
E484K
N501Y
R683G Background
Virus
Wang. Nature. 2021;592:616-22. Slide credit: clinicaloptions.com
Neutralization of SARS-CoV-2 Variant
Pseudoviruses by mRNA-1273 Vaccine-Elicited Sera
Assessed neutralization of SARS-CoV-2 Neutralization by mRNA-1273 Vaccine-Elicited Sera
spiked pseudoviruses by sera from 1.2X 6.4X
individuals who received the mRNA- NS P = .008
1273 COVID-19 vaccine in a phase I 4
trial (N = 8)
PRNT50
‒ Isogenic viruses do not include full set of vaccination
spike mutations in B.1.1.7 or 501Y.V2 256
PRNT50 (log2)
who received the BNT162b2 COVID-19
512 512
vaccine (N = 20)
256 256
‒ Samples collected 2 and 4 wk 128 128
following second dose 64 64
WT Δ69/70 + N501Y WT E484K + N501Y
Ratio of 50% neutralization geometric + D614G + D614G
(B.1.1.7) (B.1.351)
mean titer of B.1.1.7 vs WT: 1.41
Virus
Ratio of 50% neutralization geometric 2 wk post-vaccination
mean titer of B.1.351 vs WT: 0.81 4 wk post-vaccination
*Plaque reduction assay.
Xie. Nat Med. 2021;27:620. Slide credit: clinicaloptions.com
Monoclonal Antibody Activity Against
Emerging SARS-CoV-2 Variants
Assessed ability of monoclonal Neutralization by Monoclonal Antibody
antibodies to neutralize SARS-CoV-2 Combinations in Clinical Use
VSV-based pseudoviruses containing 10-4 LY-CoV555
the B.1.1.7 or B.1.351 mutations REGN10933 + REGN10987
(REGEN-COV)
10-3 LY-CoV555 + CB6
Individual mAbs in clinical use
lC50 (μg/mL)
S309
demonstrated reduced activity against Brii-196 + Brii-198
10-2
B.1.351 COV2-2196 + COV2-2130
Virus 44 SARS-CoV-2
(attenuated) inactivated
Protein based
Funk. Front Pharmacol. 2020;11:937. Slide credit: clinicaloptions.com
Vaccine Development Pathway and Updated
Remaining Questions
COVID-19 vaccine development milestones SARS-CoV-2 Vaccine Candidates in Development2
have been compressed from a time frame Limited/
Phase I Phase II Phase III Early Use Approved Abandoned
of 10-15 yr to 1-2 yr; enabled by1:
34 19 41 21 12 15
‒ Overlapping preclinical and clinical trials
As most individuals infected with SARS-CoV-2 are asymptomatic or develop only mild symptoms,
vaccine safety is critically important
‒ Theoretical risk/concern for vaccine-associated disease enhancement not supported by currently available
data; ultimately, phase III trials and postlicensure surveillance will reveal true risk 3
Immune function declines with age, and this decline is likely partially responsible for greater risk of
severe COVID-19 in older adults vaccine responses may be diminished and may require higher
doses in older adults4,5
1. Jeyanathan. Nat Review Immunol. 2020;20:615. 2. The New York Times. Coronavirus vaccine tracker.
nytimes.com/interactive/2020/science/coronavirus-vaccine-tracker.html. Updated August 3, 2022.
3. Haynes. Sci Transl Med. 2020;12:eabe0948. 4. Heaton. NEJM. 2020;383:1986. 5. Zhu. Lancet. 2020;395:1845. Slide credit: clinicaloptions.com
NEW
COVID-19 Vaccine Adverse Events
Frequency Adverse Event Implicated Vaccine Comments
Mild fever, arthralgia,
Common All Lasts 1-2 days
fatigue, sore arm
Most common in patients with prior
Anaphylaxis All hypersensitivity reaction
75% occur within first 15 min
Pfizer-BioNTech
Myocarditis Self-limited in majority
Moderna
Rare
Thrombosis and Johnson & Johnson*
thrombocytopenia syndrome AstraZeneca Highest risk in younger women aged 18-49 yr
Guillain-Barré syndrome Johnson & Johnson* Risk of Guillain-Barré syndrome due to COVID-19
is 10x greater than risk due to vaccination
*FDA advises that Johnson & Johnson vaccine be used only when mRNA vaccine is unavailable.
Risk of severe outcomes is far greater with COVID-19 infection than risk of
severe adverse reactions to any of the vaccines
secure.medicalletter.org/w1621g Slide credit: clinicaloptions.com
CDC: US COVID-19 Vaccine Schedules for Patients NEW
Dose 3
In at least In at least
Janssen (J&J) Dose 1 2 months Dose 2 4 months (2nd mRNA
(ages ≥18 yr)* (primary) (booster*) booster)
People ages ≥50 yr should People ages ≥18 yr who received 2
get a 2nd booster Janssen doses may get a 2nd booster.
*Age-appropriate mRNA and Novavax COVID-19 vaccines are preferred over Janssen COVID-19 vaccine for primary and booster vaccination.
Immune Compromise
In 3 In at least
Pfizer-BioNTech Dose 1 weeks Dose 2 8 weeks Dose 3
(primary) (primary) (primary)
(ages 6 mo-4 yr)
In 3 In at least In at least
Pfizer-BioNTech Dose 1 weeks Dose 2 4 weeks Dose 3 3 months Dose 4
(ages 5-11 yr) (primary) (primary) (primary) (booster)
*N = 36,523 without baseline infection included in efficacy analysis. Among N = 37,706 in the main safety population, 42% were >55 yr of age,
35% were obese, 28% were Hispanic/Latinx, and 9% were Black.
1. Polack. NEJM. 2020;383:2603. 2. NCT04368728. 3. Baden. NEJM. 2021;384:403. Slide credit: clinicaloptions.com
BNT162b2 Phase II/III Efficacy:
Results After Second Vaccine Dose
N = 43,448; similar efficacy observed across subgroups, including age, sex, race,
ethnicity, baseline BMI, and presence of coexisting conditions
BNT162b2 Placebo
Symptomatic
COVID-19
Vaccine Efficacy, %
Occurrence (95% Credible Interval)
≥7 Days After No. of Surveillance Time,* No. of Surveillance Time,*
Second Dose Cases 1000 PY (n) Cases 1000 PY (n)
Without
evidence of prior 8 2.2 (17,411) 162 2.2 (17,511) 95.0 (90.3-97.6)
infection
With or without
evidence of prior 9 2.3 (18,559) 169 2.3 (18,708) 94.6 (89.9-97.3)
infection
*Accrual from 7 days after second dose to end of surveillance period.
20 14 6 6
Percentage
5 1 6 1 0
0 0 0
100 100
Dose 1 Dose 1
80
80 71 66
60 60
40 >55 yr of age 40
20 20 8 7 7
9 5 7 1 1 1
1 0
0 2 2
2
2b cebo 2 b2 ebo 2
2b cebo 62b cebo 6
2
2b cebo 62b cebo
6 6 c 6 T1 Pla T1 Pla T1 Pla
T1 Pla T1 Pla T1 Pla BN BN BN
BN BN BN
Mild Moderate Severe Grade 4
Polack. NEJM. 2020;383:2603. Slide credit: clinicaloptions.com
BNT162b2 Phase II/III Safety: Solicited Systemic Events
and Antipyretic Use Within 7 Days of First Dose
Solicited Systemic Events After Dose 1 Systemic Events/Fever, ⁰C
Use of
Fever Fatigue Headache Chills Vomiting Diarrhea Muscle Pain Joint Pain Antipyretic Mild/38.0-38.4
100 Medication Moderate/38.4-38.9
80 Dose 1 Severe/38.9-40.0
60 Grade 4/>40.0
47 42
Percentage
40 33 34 28
21
20 14 11 12 11 11 6 14
4 1 6 1 1 16-55 yr of age
0
100 Systemic Events / Fever ⁰C
80
60
40 34
23 25 20
20 18 14 8
1 6 3 8 7 9 6 12
0 0 1 >55 yr of age
0 2 o
2b ceb 2 b2 ebo 2 b2 ebo 2 b2 ebo 2b2 ebo 2 b2 ebo 2 b2 ebo 2 b2 ebo 2 b2 ebo
6 16 Plac 16 Plac 6
1 Plac
T1 Pla T16 Plac T T T16 Plac T 16 Plac T T 16 Plac T16 Plac
N BN N
B BN BN BN BN B BN BN
Polack. NEJM. 2020;383:2603. Slide credit: clinicaloptions.com
BNT162b2 Phase II/III Safety: Solicited Systemic Events
and Antipyretic Use Within 7 Days of Second Dose
Solicited Systemic Events After Dose 2 Systemic Events/Fever, ⁰C
Use of
Fever Fatigue Headache Chills Vomiting Diarrhea Muscle Pain Joint Pain Antipyretic Mild/38.0-38.4
100 Medication Moderate/38.4-38.9
80 Dose 1 Severe/38.9-40.0
59 Grade 4/>40.0
60 52 Dose 1 45
37
Percentage
40 35
23 24 22
20 16 10 8 13
8
0 4 2 1 5 16-55 yr of age
0
100 Systemic Events / Fever ⁰C
80
60 51
39 38
40 29
17 23 19
20 11 14 8 10
0 3 1 0 6 5 4 >55 yr of age
0
2 b2 ebo 2 b2 ebo 2b2 ebo 2b2 ebo 2b2 ebo 2 b2 ebo 2 b2 ebo 2 b2 ebo 2b2 ebo
T16 Plac T 16 Plac T 16 Plac T16 Plac T16 Plac T 16 Plac T16 Plac T 16 Plac T 16 Plac
BN BN BN BN BN BN BN BN BN
Polack. NEJM. 2020;383:2603. Slide credit: clinicaloptions.com
Efficacy and Safety of BNT162b2 Vaccine in Children 6NEW
Mo Up to 5 Yr: Topline Results
1678 participants enrolled
‒ Vaccine consisted of three 3-μg doses
‒ Doses 1 and 2 were administered 21 days apart
‒ Dose 3 was administered ≥2 mo after dose 2
Immunogenicity was similar to 30-μg 2-dose primary series in patients
aged 16-25 yr, meeting noninferiority criteria and coprimary endpoints
3-dose vaccine efficacy at preventing SARS-CoV-2 infection
(during omicron): 80.3%
FDA authorized vaccine for use in this age group in June 2022
Pfizer. Press release. May 23, 2022. Data not peer reviewed. FDA. Press release. June 17, 2022. Data not peer reviewed. Slide credit: clinicaloptions.com
FDA Approval and EUA of BNT162b2: Specific
Populations and Warnings
Use in specific populations Warnings
Pregnancy: available data insufficient to Appropriate medical treatment used to
inform vaccine-associated risks in manage immediate allergic reactions
pregnancy must be immediately available in the
event of acute anaphylactic reaction
Lactation: no data to assess effects on following administration of the vaccine
infants, or milk production/excretion
Immunocompromised persons or those
Pediatrics: EUA includes use in individuals on immunosuppressant therapy may
as young as 6 mo of age have a diminished immune response to
‒ Different doses for different pediatric age the vaccine
ranges Vaccine may not protect all recipients
Pfizer-BioNTech COVID-19 Vaccine. Fact sheet for HCPs administering vaccine. Last updated July 8, 2022.
fda.gov/media/151707/download. Last updated July 2022. Slide credit: clinicaloptions.com
mRNA-1273: Preliminary Safety Data Within
7 Days of First or Second Dose
Mild Moderate Severe
Symptom Dose Group Vaccination 1 Vaccination 2 Symptom Dose Group Vaccination 1 Vaccination 2
Any systemic 25 μg 25 μg
symptom 100 μg Myalgia 100 μg
250 μg 250 μg
25 μg 25 μg
Arthralgia 100 μg Nausea 100 μg
250 μg 250 μg
25 μg 25 μg
Any local
Fatigue 100 μg 100 μg
symptom
250 μg 250 μg
25 μg 25 μg
Fever 100 μg Size of erythema
100 μg
250 μg or redness
250 μg
25 μg 25 μg
Chills 100 μg Size of induration
100 μg
250 μg or swelling 250 μg
25 μg 25 μg
Headache 100 μg Pain 100 μg
250 μg 250 μg
0 20 40 60 80 100 20 40 60 80 100 0 20 40 60 80 100 20 40 60 80 100
Participants (%) Participants (%)
Moderna. Press release. March 23, 2022. Data not peer reviewed. Moderna. Press release.
April 28, 2022. Data not peer reviewed. Moderna. Press release. June 17, 2022. Data not peer reviewed. Slide credit: clinicaloptions.com
Prescribing Information for mRNA-1273:
Specific Populations and Warnings
Use in specific populations Use with other vaccines
Pregnancy: available data insufficient to No information on coadministration of this
inform vaccine-associated risks in pregnancy vaccine with other vaccines
‒ Pregnant women vaccinated with the Moderna Warnings
vaccine encouraged to enroll
in pregnancy exposure registry ‒ Appropriate medical treatment used to manage
1-866-663-3762 immediate allergic reactions must be
Lactation: no data to assess effects on infants immediately available in the event of acute
anaphylactic reaction following administration
or milk production/excretion
of the vaccine
Pediatrics: EUA includes use in individuals as
‒ Immunocompromised persons or those
young as 6 mo of age
receiving immunosuppressant therapy may
‒ Different doses for different pediatric age have a diminished response to the vaccine
ranges
‒ Vaccine may not protect all recipients
Moderna COVID-19 Vaccine. Fact sheet for HCPs administering vaccine. Last updated June 17, 2022.
fda.gov/media/155675/download. Last updated January 2022. Slide credit: clinicaloptions.com
Ad26.COV2.S Vaccine Data
Ad26.COV2.S: Study Design
Multicenter, randomized, placebo-controlled phase I/IIa trial comparing low- and
high-dose administration of Ad26.COV2.S in single- and 2-dose schedules (N = 805)
‒ Ad26.COV2.S: recombinant, replication-incompetent adenovirus serotype 26 vector
encoding full-length, stabilized SARS-CoV-2 spike protein
Cohort 1: 18-55 Yr of Age Cohort 3: ≥65 Yr of Age
Low High Low High
Baseline Overall Placebo Baseline Overall Placebo
Dose Dose Dose Dose
Characteristic (N = 402) (n = 162) (n = 158) (n = 82) Characteristic (N = 403) (n = 161) (n = 161) (n = 81)
Male sex, n (%) 190 (47) 78 (48) 72 (46) 40 (49) Male sex, n (%) 201 (50) 84 (52) 79 (49) 38 (47)
Mean age, yr 35.4 36.1 34.8 35.4 Mean age, yr 69.8 69.6 70.0 69.9
(SD) (10.2) (10.1) (10.3) (10.0) (SD) (4.0) (4.0) (4.2) (3.7)
Race, n (%) Race, n (%)
White 364 (91) 149 (92) 145 (92) 70 (85) White 397 (99) 158 (98) 158 (98) 81 (100)
Black 20 (5) 4 (2) 7 (4) 9 (11) Black 3 (1) 1 (1) 2 (1) 0
Mean BMI (SD) 24.6 (3.2) 24.5 (3.3) 24.6 (3.1) 24.5 (3.0) Mean BMI (SD) 25.4 (2.8) 25.3 (2.8) 25.5 (2.7) 25.2 (3.1)
Dosing: 5 x 1010 (low) or 1 × 1011 (high) viral particles/mL. Overall SARS-CoV-2 seropositivity rate at baseline: 1% (n = 11).
Sadoff. NEJM. 2021;384:1824. Slide credit: clinicaloptions.com
Ad26.COV2.S: Solicited AEs After First Dose
Systemic AEs Local AEs
Any
18-55 Yr Any
≥65 Yr 18-55 Yr Any
≥65 Yr
Any
Low dose Low dose Low dose Low dose
High dose High dose High dose High dose
Placebo Placebo Placebo Placebo
Fatigue Fatigue Erythema Erythema
Low dose Low dose Low dose Low dose
High dose High dose High dose High dose
Placebo Placebo Placebo Placebo
Headache Headache Pain Pain
Low dose Low dose Low dose Low dose
High dose High dose High dose High dose
Placebo Placebo Placebo Placebo
Myalgia Myalgia Swelling Swelling
Low dose Low dose Low dose Low dose
High dose High dose High dose High dose
Placebo Placebo Placebo Placebo
Nausea Nausea 0 20 40 60 80 100
Low dose Low dose 0 20 40 60 80 100
High dose High dose Participants With Reaction (%) Participants With Reaction (%)
Placebo Placebo
Pyrexia Pyrexia
Low dose Low dose
High dose High dose Grade 1
Placebo Placebo
Grade 2
0 20 40 60 80 100 0 20 40 60 80 100 Grade 3
Participants With Reaction (%) Participants With Reaction (%)
Sadoff. NEJM. 2021;384:1824. Slide credit: clinicaloptions.com
FDA EUA of Ad26.COV2.S:
Specific Populations and Warnings
Use in specific populations Use with other vaccines
‒ Pregnancy: available data insufficient to ‒ No information on coadministration of this
inform vaccine-associated risks in vaccine with other vaccines
pregnancy
Warnings
‒ Pregnant women vaccinated with the
Janssen vaccine encouraged to enroll in ‒ Appropriate medical treatment used to
pregnancy exposure registry by visiting manage immediate allergic reactions must
https://c-viper.pregistry.com/ be immediately available in the event of
acute anaphylactic reaction following
‒ Lactation: no data to assess effects on
administration of the vaccine
infants, or milk production/excretion
‒ Immunocompromised persons or those on
‒ Pediatrics: EUA does not include use in
immunosuppressant therapy may have a
individuals <18 yr of age
diminished immune response to the vaccine
‒ Vaccine may not protect all recipients
Janssen COVID-19 Vaccine. Fact sheet for HCPs administering vaccine. Last updated January 31, 2022. Slide credit: clinicaloptions.com
mRNA and Ad26.COV2.S Efficacy
COVID-19 Vaccines: Where Are We Now?
% People Fully Vaccinated
*Full vaccination was defined as index testing or admission date ≥14 days after second dose of BNT162b2 (Pfizer-BioNTech) or mRNA-1273 (Moderna) or after a single dose of
Ad26.COV2 (Janssen) vaccine.
†
Estimated using a test-negative design, adjusted for age, geographic region, calendar time (cubic spline with quartile knots), and virus circulation (percentage of SARS-CoV-2–
positive results from testing within the counties surrounding the facility on the date of the event) and weighted for inverse propensity to be vaccinated or unvaccinated
(calculated separately for each of the 10 VE models) using facility characteristics, sociodemographics, and underlying medical conditions.
1. assets.publishing.service.gov.uk/government/uploads/system/uploads/attachment_data/file/
1050721/Vaccine-surveillance-report-week-4.pdf. 2. Thompson. MMWR. 2022;71:139. Slide credit: clinicaloptions.com
Omicron Neutralization Activity After Vaccination
28 days after a third vaccine
Victoria Delta Omicron
dose, neutralization titers are
%IFN+/CD8+ T-Cells
100 100
10-1 10-1
10-2 10-2
10-3 10-3
A a n A a n A on
W Delt icro W Delt icro W ic r
Om Om Om
Mo 1 Mo 8 Mo 8
Time Following Immunization
Liu. medRxiv. 2022;[Preprint]. Note: This study has not been peer reviewed. Slide credit: clinicaloptions.com
ChAdOx1 nCoV-19 (AZD1222) Vaccine Data
ChAdOx1 nCoV-19 Vaccine Against SARS-CoV-2
(Oxford-AstraZeneca): Study Design
Randomized, single-blind, controlled phase I/II trial
ChAdOx1 nCoV-19: chimpanzee adenovirus-vectored vaccine expressing SARS-CoV-2 spike
protein
ChAdOx1 nCoV-19*
Healthy adults aged 18-55 yr Single IM dose†: 5 x 1010
with no history of laboratory
(n = 543)
confirmed SARS-CoV-2
infection or COVID-19–like MenACWY*
symptoms (N = 1077) Single IM standard dose
(n = 534)
*Protocol amendment allowed prophylactic paracetamol to be administered before vaccination to 56 participants in
ChAdOx1 nCoV-19 group and to 57 in MenACWY group. †10 additional participants assigned to a nonrandomized,
unblinded prime-boost group received a second vaccine dose 28 days after the first dose.
Median age: 35 yr (IQR: 28-44 yr); 50.2% male; 90.9% White
Primary endpoints: number of symptomatic virologically confirmed COVID-19 and safety
Current preliminary analysis: safety, reactogenicity, cellular, and humoral responses
Folegatti. Lancet. 2020;396:467. NCT04324606. Slide credit: clinicaloptions.com
ChAdOx1 nCoV-19 Vaccine Against SARS-CoV-2:
Antibody Response
62% of prime-only ChAdOx1 nCoV-19 recipients and 100% of prime-boost
recipients had neutralizing antibodies that completely inhibited the cytopathic
effects of SARS-CoV-2 by Day 56
‒ Strong correlation between neutralizing antibody responses and antibody levels
measured by ELISA (R2 = 0.67; P <.001)
Prime Prime Boost
MenACWY
256 256
Marburg VNIC100
ChAd0x1 nCoV-19
Marburg VNIC100
64 64
16 16
4 4
1 1
0 56 Patients Health-
14 28 35 42 0 14 28 35 42 56 Patients Health-
with PCR- care with PCR- care
Number assessed Days since vaccination confirmed workers Days since vaccination confirmed workers
ChAd0x1 nCoV-19 44 44 44 0 0 37 COVID-19 (n = 3) 10 10 10 10 9 10 COVID-19 (n = 3)
MenACWY 44 44 43 0 0 25 (n = 5) - - - - - - (n = 5)
Folegatti. Lancet. 2020;396:467. Slide credit: clinicaloptions.com
ChAdOx1 nCoV-19 (AZD1222) Safety: Solicited Local
Events Within 7 Days After Standard Prime Dose
Induration Itch Pain Redness Swelling Tenderness Warmth Mild
75 75 75 75 75 75 75 Moderate
50 50 50 50 50 50 50 Severe
18-55 yr
25 25 25 25 25 25 25 of age Requiring hospital
admission
0 0 0 0 0 0 0
1 3 5 7 1 3 5 7 1 3 5 7 1 3 5 7 1 3 5 7 1 3 5 7 1 3 5 7
75 75 75 75 75 75 75
Percentage
50 50 50 50 50 50 50 56-69 yr
of age
25 25 25 25 25 25 25
0 0 0 0 0 0 0
1 3 5 7 1 3 5 7 1 3 5 7 1 3 5 7 1 3 5 7 1 3 5 7 1 3 5 7
75 75 75 75 75 75 75
50 50 50 50 50 50 50 ≥70 yr
of age
25 25 25 25 25 25 25
Days After Prime
Vaccination → 0 0 0 0 0 0 0
1 3 5 7 1 3 5 7 1 3 5 7 1 3 5 7 1 3 5 7 1 3 5 7 1 3 5 7
Ramasamy. Lancet. 2021;396:1979. Slide credit: clinicaloptions.com
ChAdOx1 nCoV-19 (AZD1222) Safety: Solicited Systemic
Events Within 7 Days After Standard Prime Dose
Joint Muscle
Mild
Chills Fatigue Fever Feverish Headache Pain Malaise Aches Nausea
75 75 75 75 75 75 75 75 75 Moderate
50 50 50 50 50 50 50 50 50 Severe
18-55 yr
25 25 25 25 25 25 25 25 25 of age Requiring hospital
admission
0 0 0 0 0 0 0 0 0
1 3 5 7 1 3 5 7 1 3 5 7 1 3 5 7 1 3 5 7 1 3 5 7 1 3 5 7 1 3 5 7 1 3 5 7
75 75 75 75 75 75 75 75 75
Percentage
50 50 50 50 50 50 50 50 50 56-69 yr
25 25 25 25 25 25 25
of age
25 25
0 0 0 0 0 0 0 0 0
1 3 5 7 1 3 5 7 1 3 5 7 1 3 5 7 1 3 5 7 1 3 5 7 1 3 5 7 1 3 5 7 1 3 5 7
75 75 75 75 75 75 75 75 75
50 50 50 50 50 50 50 50 50 ≥70 yr
of age
25 25 25 25 25 25 25 25 25
75 75 75 75 75 75 75 75 75
Percentage
50 50 50 50 50 50 50 50 50 56-69 yr
25 25 25 25 25 25 25
of age
25 25
0 0 0 0 0 0 0 0 0
1 3 5 7 1 3 5 7 1 3 5 7 1 3 5 7 1 3 5 7 1 3 5 7 1 3 5 7 1 3 5 7 1 3 5 7
75 75 75 75 75 75 75 75 75
50 50 50 50 50 50 50 50 50 ≥70 yr
of age
25 25 25 25 25 25 25 25 25
10,000 84x
9x 27x 153x
23x 34x 25x 11x 25x
23x
1000
28,545
20,409
7894
7204
6958
6188
7006
5294
5829
5392
100
808
473
339
315
249
259
222
230
224
146
n 189 202 66 67 50 63 58 50 27 30 89 99 32 34 25 28 43 42 27 28
10
Primary series BNT162b2 mRNA-1273 Ad26.COV2.S ChAdOx1 CoV2 preS BNT162b2 mRNA-1273 Ad26.COV2.S ChAdOx1 CoV2 preS
nCoV-19 dTM-AS03 nCoV-19 dTM-AS03
Booster vaccine CoV2 preS CoV2 preS CoV2 preS CoV2 preS CoV2 preS CoV2 preS CoV2 preS CoV2 preS CoV2 preS CoV2 preS
dTM-AS03 dTM-AS03 dTM-AS03 dTM-AS03 dTM-AS03 dTM-AS03 dTM-AS03 dTM-AS03 dTM-AS03 dTM-AS03
Day 1
Day 15
Sanofi. Press release. February 23, 2022. Press release only, not peer reviewed. Slide credit: clinicaloptions.com
NVX-CoV2372 Vaccine
NVX-CoV2373 Nanoparticle Vaccine
Against SARS-CoV-2: Study Design
Randomized, placebo-controlled phase I/II trial of trimeric full-length SARS-CoV-2
spike glycoproteins ± Matrix-M1 adjuvant in adults aged 18-59 yr (N = 131)
Group A (n = 23) Placebo on Day 0 and Day 21
Placebo Placebo
25 µg 25 µg
Any localized 5 µg + Matrix-M1 5 µg + Matrix-M1
adverse events 25 µg + Matrix-M1 25 µg + Matrix-M1
25 µg + Matrix-M1 Placebo
0 20 40 60 80 100 0 20 40 60 80 100
Placebo Placebo
Any systemic 25 µg 25 µg
5 µg + Matrix-M1 5 µg + Matrix-M1
adverse events
25 µg + Matrix-M1 25 µg + Matrix-M1
25 µg + Matrix-M1 Placebo
0 20 40 60 80 100 0 20 40 60 80 100
Keech. NEJM. 2020;383:2320. Percentage of Participants Slide credit: clinicaloptions.com
NVX-CoV2373 Nanoparticle Vaccine Against
SARS-CoV-2: Anti-Spike IgG Response
63,160 47,521
8344
Anti-Spike IgG (EU/ml)
105 10 5
Day 0 21 35 0 21 35 0 21 35 0 21 35 0 21 35 Human
Placebo 25 µg 5 µg 25 µg 25 µg Convalescent
(dose 1 and 2) rSARS-CoV-2 rSARS-CoV-2+Matrix-MI rSARS-CoV-2+ Serum
(dose 1 and 2) (dose 1 and 2) Matrix-MI (dose 1)
and Placebo (dose 2)
No. of Patients
23/21 23/21 23/21 23/21 26/26
(dose 1/dose 2)
Keech. NEJM. 2020;383:2320. Slide credit: clinicaloptions.com
PREVENT-19 Clinical Trial
Phase III clinical trial in adults aged ≥18 yr (n = 25,000) in the US and Mexico
without known previous SARS-CoV-2 infection
Confirmed, Symptomatic COVID-19 Local and Systemic Adverse Events
(≥7 days after second dose)
Incidence per 1000 Person-Yr
Vaccine
100 100 Placebo
80 Incidence: 34.0 80 78.9
Participants (%)
69.5
95% CI: 20.7-55.9 58.0
60 (63 cases) 60
Incidence: 3.3 47.7
40.0 35.9
40 95% CI: 1.6-6.9 40
(14 cases) 21.1 21.7
20 20
0 0
Vaccine Placebo Dose 1 Dose 2 Dose 1 Dose 2
Local Systemic
1. Dunkle. NEJM. 2022;386:531. 2. Heath. NEJM. 2021;385:1172. 3. Shinde. NEJM. 2021;384:1899. Slide credit: clinicaloptions.com
PREVENT-19 Pediatric Expansion Updated
cdc.gov/coronavirus/2019-ncov/vaccines/booster-shot.html. FDA News Release. May 17, 2022. Slide credit: clinicaloptions.com
Immunocompromised Hosts Have Heterogeneous
Response Following mRNA Immunization
12
100,000
10
RBD-Binding IgG (s/co)
6
1000
4
100
2
0 0
P L V S s x x T x a l P L I V DS ies Tx x CT Tx a rol
IC NH HI MD ncie er T rt T SC ey T lom ntro IC NH H M nc er T m
rt HS ney elo ont
L/ a Liv a H n L/ a i v a
C L g n H e id ye Co C L
l ign L He Kid My C
i K M
al le m
a
p le
m tip ti
lid u l o lid ul
So M S M
Prevalence (%)
68% developed anti–SARS-CoV-2 60
IgG Titer
antibodies after third dose 102
40
‒ 32% still with no detectable
antibodies 1 mo after third dose 20
101
30-39 yr
‒ Median age: 52 yr, 51% female 40-49 yr
67 69
80 Jan 21
44 44 Feb 21
39 41
60
16 16 Mar 21
40 Apr 21
20 All
0
SARS-CoV-2 Symptomatic COVID-19 Severe
Infections COVID-19 Hospitalizations COVID-19
Heterologous
SARS-CoV-2
vector or mRNA Vector mRNA Humoral and cellular immunity
(and variants)
vaccines
Cellular immunity:
Homologous
Vector Vector Spike-specific CD4+ and
vector vaccines
CD8+ T-cells
Deming. Nat Med. 2021;27:1510. Schmidt. Nat Med. 2021;27:1530. Borobia. Lancet. 2021;398:121. Slide credit: clinicaloptions.com
NIAID: Booster “Mix & Match” Study
N = 458 (150+ per vaccine) Boost: Ad26.COV2.S Boost: Ad26.COV2.S
12 wk post vaccine Ad26.COV2.S mRNA-1273 BNT 162b2
Ad26.COV2.S mRNA-1273 BNT 162b2
Safety, antibody titers at 10 5 104
Individuals ≥60 yr of Received fourth BNT162b2 dose Received fourth BNT162b2 dose
age who were eligible (n = 623,355) (n = 623,355)
Internal Control 4-Dose Group Confirmed
for a fourth COVID-19 Severe
COVID-19
vaccine dose in illness
Did not receive fourth BNT162b2 dose infection
January 2022 (n = 628,976)
(N = 1,289,003) 3-Dose Group
366
350 3.5
Confirmed Infection
300 3.0
250 2.5
200 177 2.0
1.5
150 1.5
100 1.0
50 0.5
0 0
4-Dose 3-Dose Internal Control 4-Dose 3-Dose Internal Control
Group Group
4-Dose Group: received fourth vaccine dose; evaluated 8 days post dose
Internal Control Group: received fourth vaccine dose; evaluated 3-7 days post dose
Bar-On. NEJM. 2022;386:1712. Slide credit: clinicaloptions.com
Fourth Dose of BNT162b2 Vaccine:
Real-World Effectiveness
7.5
7.0 Severe illness
Confirmed infection
6.5
6.0
(3
5.5
5.0
Doses:4 Doses)
Adjusted Rate Ratio
4.5
4.0
3.5
3.0
2.5
2.0
1.5
1.0
Internal Wk 2 Wk 3 Wk 4 Wk 5 Wk 6 Wk 7 Wk 8
control (Days 8-14) (Days 15-21) (Days 22-28) (Days 29-35) (Days 36-42) (Days 43-49) (Days 50-56)
(Days 3-7) Time Since Dose 4
0.02
0
0 7 14 21 28
Days Since Dose 4
Regev-Yochay. medRxiv. 2022. Note: this study has not been peer reviewed. Slide credit: clinicaloptions.com
Primary Outcome: Virus Neutralization Efficiency With
Fourth Vaccine Doses
136.3 102.7
1024 135.6 1024 101.6 98.7
57.02 107.6 49.3
256 256 14.2
64 12.7 64
16 16
4 4
1 1
WT Delta icron WT Delta icron WT Delta icron WT Delta icron WT Delta icron WT Delta icron
Om Om Om Om Om Om
Regev-Yochay. medRxiv. 2022. Note: this study has not been peer reviewed. Slide credit: clinicaloptions.com
Secondary Outcome: Fourth Dose Safety of
BNT162b2 and mRNA-1273 Vaccines
100 mRNA-1273-Age >60
Proportion of the Study Population (%)
mRNA-1273-Age 25-60
80 BNT162b2-Age >60
BNT162b2-Age 25-60
60
40
20
0
Any Local Any Systemic Fatigue Myalgia Headache Fever Lymphadenopathy
Symptoms Symptoms
Regev-Yochay. medRxiv. 2022. Note: this study has not been peer reviewed. Slide credit: clinicaloptions.com
Effectiveness of Second mRNA Vaccine Booster in NEW
Cumulative Hazard
vaccine dose) 0.00075 First Booster
Second Booster
Results in 4-dose vs 3-dose group: 0.00050
*Adjusted for age, yr of HIV infection, CD4+ cell count nadir, HIV-1 RNA <50 vs ≥50 copies/mL, BNT162n2 vs mRNA-1273 vaccine), previous or current malignancy.
†
Adjusted for age, yr of HIV infection, current CD4+ cell count; CD4+ cell count nadir, HIV-RNA <50 vs ≥50 copies/mL, BNT162n2 vs mRNA-1273 vaccine), previous
or current malignancy.
Immunogenicity of vaccines strongly related to CD4+ cell count at the time of vaccination; lower CD4+ cell
count significantly and independently predicts a poorer immune response to SARS-CoV-2 vaccine
Antinori. EACS 2021. Abstr OS4/3. Slide credit: clinicaloptions.com
Reactogenicity of mRNA-1273 Anti–SARS-Cov-2 Vaccine
in People With HIV
Design Outcomes
Follow-up of people with HIV who received ≥1 dose Higher rate of moderate symptoms after first dose
of mRNA-1273 vaccine using in-person or online of vaccine in female, younger, and unsuppressed
questionnaire within 1 wk of each dose (N = 453) persons
‒ Queries: severity of symptoms related to the ‒ After second dose, younger patients with moderate
inoculation, previous COVID-19 (if applicable) symptoms
‒ Moderate symptoms: Interfered with ADL or required Lower rate of moderate symptoms in those with
time off work
latest CD4+ cell count <200 cells/mm³ after both
‒ Severe: required hospitalization, access to ED, or resulted first and second dose (both NS)
in death
Risk of moderate symptoms decreased with every
‒ HIV-related clinical data collected via medical records 10 yr of age, after adjustment
BL characteristics: latest CD4+ <200 cells/mm³ in Data comparable with those compiled from cohort
15 (3.3%); 11 patients (2.4%) unsuppressed; of healthcare workers vaccinated with mRNA-
31 (6.8%) reported previous COVID-19 infection, BNT162b2
mostly asymptomatic or mildly symptomatic
Tomasoni. EACS 2021. Abstr OS4/4. Slide credit: clinicaloptions.com
Outcomes With Infrequent HIV-1 RNA Monitoring
During the COVID-19 Pandemic
Outcomes for PWH suppressed with HIV-1 RNA <200 copies/mL on ART
pre–COVID-19 (March 2019 to February 2020) were compared with outcomes
during the COVID-19 period (March 2020 to February 2021)
N = 2571 had HIV-1 RNA <200 copies/mL pre–COVID-19
‒ n = 523 (20.3%) did not have an HIV-1 RNA test during COVID-19 period
‒ n = 45 (1.8%) had an HIV-1 RNA >200 copies/mL during COVID-19, n = 2 with emergent
resistance
Measure Pre–COVID-19 COVID-19
(N = 2661) (N = 2048)
Number of VL tests per patient per yr, mean (SD) 2.3 (1.08) 1.1 (0.83)
Longest time between VL tests, mean wk (SD) 29.5 (8.25) 43.7 (12.64)
Previously suppressed people without a VL test for
≥12 mo, n (%) 82 (3%) 581 (28%)
Ad-5-Vectored Vaccine
Single dose: 5 x 1010 viral particles/mL
(n = 129)
Healthy adults aged ≥18 yr, HIV Ad-5-Vectored Vaccine
negative, with no previous SARS- Single dose: 1 x 1011 viral particles/mL
CoV-2 infection (N = 603) (n = 253)
Placebo
(n = 126)
Most common solicited systemic reactions in vaccine groups were fatigue, fever, and
headache; most common ISR was pain
‒ Fever was the most reported grade 3 adverse reaction (1% of participants in the 5 x 10 10 group
and 8% in the 1 x 1011 vp/mL group)
Zhu. Lancet. 2020;395:1845. Slide credit: clinicaloptions.com
Ad-5-Vectored Vaccine Against SARS-CoV-2:
Antibody Response
Binding Antibodies to RBD Neutralizing Antibodies at Day 28
Seroconversion* (%)
80 60 80
600
500 60 45 60
400
300 40 30 40
200
20 15 20
100
0 0 0 0
5x10 vp 1x10 vp Placebo 5x10 vp 1x10 vp Placebo
10 11 10 11
5x10 vp 1x10 vp Placebo 5x10 vp 1x10 vp Placebo
10 11 10 11
*Independent variables included in multivariable analysis. †Only included in neutralising antibody analysis.
12,800 80.0
Reciprocal Titer
6,400
3,200 40.0
1,600
20.0
800
400 10.0
200
100 5.0
50 2.5
25
0 14 21 28 42 0 14 21 28 42Convalescent 0 14 28 42 0 14 28 42 Convalescent
plasma plasma
Days After rAd26-S Administration Days After rAd26-S Administration
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