Professional Documents
Culture Documents
Balasundaram Etal2009
Balasundaram Etal2009
The Advanced Centre for Biochemical Engineering, Department of Biochemical Engineering, University College London,
Torrington Place, London WC1E 7JE, UK
2
Centre for Bioprocess Engineering Research, Department of Chemical Engineering, University of Cape Town 7701, South Africa
0167-7799/$ see front matter 2009 Elsevier Ltd. All rights reserved. doi:10.1016/j.tibtech.2009.04.004 Available online 1 July 2009
477
Review
Figure 1. Compartmentalization of products in yeast and Gram-negative bacteria as hosts. Examples of products and the corresponding cell disruption techniques used for
their release are shown. Abbreviations: ER, endoplasmic reticulum; IB, inclusion bodies; S, secretory vesicles.
Review
Trends in Biotechnology
Vol.27 No.8
Figure 2. Generic flow sheet for purification of intracellular recombinant therapeutic proteins from microbial host cells, indicating the impact of product release on whole
bioprocess. Abbreviations: AEX, anion exchange; CEX, cation exchange; HIC, hydrophobic interaction chromatography. In the case of an insoluble product, such as
inclusion bodies, an additional resolubilization step is included after cell disruption.
Review
Chemical and enzymatic methods have been limited to
laboratory scale mainly because of the costs of the chemicals or enzymes required for disruption at large scale but
also because of difficulties in removing exogenous chemicals from the product of interest or the potential denaturation of the product on exposure to specific chemicals [25].
For instance, in a large-scale process for the production of
polyhydroxybutyrate from Cupriavidus necator (previously known as Alcaligenes eutrophus), mechanical
methods were found to be superior to chemical lysis
because the latter required large amount of chemicals
and also longer processing time [18,26,27].
The relative selectivity and recovery that can be
achieved with the above-mentioned methods of cell disruption is summarized in Figure 3. Although the industrially
preferred mechanical methods, such as bead mills and
high-pressure homogenizers, are superior in terms of product recovery, their poor selectivity is a major drawback.
Taken together, it is apparent that an industrially
applicable method for product release with enhanced selectivity and reduced micronization will be vital to address
the future needs of the bioprocess industry.
Optimization of upstream processing for efficient cell
disruption
Microbial cells in the rapid-growing phase (i.e. those that
are cultivated at higher growth rate) have been reported to
disrupt more easily than cells in the stationary or slowgrowing phase [25,27,28]. By contrast, cells cultivated at
low growth rate were resilient to disruption [29,30], most
likely due to an increased production of peptidoglycans,
Figure 3. Relationship between the selectivity of product release and the ease of product recovery for various disruption techniques based on literature reports.
480
Review
Trends in Biotechnology
Vol.27 No.8
S. cerevisiae
S. cerevisiae
S. cerevisiae
S. cerevisiae
S. cerevisiae
G6PDH
High-pressure homogenization
Invertase (cell wall bound), acid phosphatase (periplasmic),
S. cerevisiae
G6PDH and 6PGDH (cytoplasmic), alkaline phosphatase,
(cytoplasmic membrane bound), fumarase (mitochondrial)
Ultrasonication
Acid phosphatase (periplasmic), b-galactosidase (periplasmic),
E. coli
G6PDH (cytoplasmic)
Hydrodynamic cavitation
Invertase (cell wall bound), a-glucosidase (periplasmic),
S. cerevisiae
ADH (cytoplasmic)
Acid phosphatase (periplasmic), soluble protein (cytoplasmic)
E. coli
Refs
[45]
[51]
[53]
[24]
[43]
[46]
[47]
[48]
[49]
[29]
481
Review
Refs
[57]
[70]
[61]
[60]
[71]
[58]
[55]
Cavitation Sonication is more selective than homogenization in terms of releasing periplasmic enzymes
[53]. The related hydrodynamic cavitation approach also
has higher selectivity than high-pressure homogenization
when used to release periplasmic products such as acid
phosphatase from E. coli [29] and a-glucosidase from
brewers yeast [24]. For instance, during the disruption
of E. coli by hydrodynamic cavitation, 90% of the acid
phosphatase was released from the periplasm and only
45% of the soluble proteins (i.e. the contaminants) were coreleased. This effect might be attributed to the cell
disruption mechanism, which constitutes pressure
fluctuations of oscillating or collapsing vapour cavities
interacting with the cell wall and acting on its exterior
surface, thus damaging the cell wall but leaving the
cytoplasm largely intact. This method has also been
applied to yeast cell invertase, a cell-wall-bound yeast
enzyme, which could be released selectively [24,54].
However, the efficiency of the release of cytoplasmic
constituents
from
yeast
requires
considerable
improvement to expand the applicability of this
technique to the large number of yeast products that are
retained in the cytoplasm.
High-pressure homogenisation High-pressure homogenization is a widely used technique for cell disruption
because complete cell disruption and maximum product
recovery can be achieved, albeit with a poor selectivity
(Figure 3). During high-pressure homogenization of S.
cerevisiae over the discharge pressure 1046 MPa,
periplasmic enzyme was found to be released faster,
followed by cell-wall-bound, cytoplasmic and membranebound enzymes in this order [51]. The differences in
the release rates of the enzymes were acknowledged to
482
Review
demonstrated using different chemicals, such as anionic
surfactants for the release of several proteins, including
penicillin acylase [56], glycine for the release of a-amylase
[57], Triton X-100 and K2HPO4 for the release of asparaginase [58] and glycol ether for the release of a proprietary
protein product [59]. Furthermore, in E. coli, penicillin
acylase released via osmotic shock conditions had a higher
specific activity (3.9 U/mg) than penicillin acylase released
via sonication (0.3 U/mg) [60]. Furthermore, spheroplasts,
which are obtained after a partial cell wall loss, were also
able to selectively release periplasmic enzymes [61,62];
however, this method was found to be cost prohibitive at
pilot scale [62].
Future trends
Based on the above discussion, we have identified three key
areas that could provide improvement in intracellular
product release strategies in the immediate future.
Innovations in cell disruption technology
The mechanical forces involved in the traditional disruption techniques, bead mills and high-pressure homogenizers, are often very intense, resulting in a complete
rupture of the cell, which presents a greater challenge
for the selective release of a periplasmic product. Instead,
a combination of disruption techniques, such as homogenization and heat lysis, as reported by Sehdev and Spitali
[52], constitutes a feasible alternative approach for achieving selective product release. Hydrodynamic cavitation,
which has similar underlying principles to homogenization, has shown promising results for selective release
of periplasmic products [29]. Its mode of action targets the
cell envelope from the outside, thereby facilitating incremental breakage. In our view, technologies that enable cell
disruption conditions to be varied over a range at process
scale to selectively liberate products depending on their
cellular location will be required to meet the future needs
of the bioprocess industry.
Novel process strategies
Unit operations can also be integrated, so that product
release and concentration can be achieved in the same
step. This is possible through the use of aqueous two-phase
systems [63], polymers such as ethylene butyl glycol [59] or
heat lysis for a thermostable product [64]. Further work is
required to inform process design where multiple objectives or a sequence of operations is crucial.
Microscale bioprocess development
To assess the benefits of alternative process strategies, a
large number of process variables need to be investigated,
which implies a large number of experiments involving
large amounts of resources and time. Thus microscale
technologies that are informative of large-scale processes
might have a key role in the development of advanced
industrial bioprocesses [65,66]. In particular, pertaining to
the cell disruption unit operation, an innovative ultrasonication device for increased throughput has shown promising results in investigating the impact of cell disruption
on other unit operations at greater speed than previous
approaches [67].
Trends in Biotechnology
Vol.27 No.8
References
1 Werner, R.G. (2004) Economic aspects of commercial manufacture of
biopharmaceuticals. J. Biotechnol. 113, 171182
2 Walsh, G. (2006) Biopharmaceutical benchmarks 2006. Nat.
Biotechnol. 24, 769776
3 Andersen, D.C. (2004) Production technologies for monoclonal
antibodies and their fragments. Curr. Opin. Biotechnol. 15, 456
4 Langer, E. and Ranck, J. (2006) Capacity bottleneck squeezed by
downstream processes. BioProcess International 4, 1417
5 Thommes, J. and Etzel, M. (2007) Alternatives to chromatographic
separations. Biotechnol. Prog. 23, 4245
6 Low, D. et al. (2007) Future of antibody purification. J. Chromatogr. B
Analyt. Technol. Biomed. Life Sci. 848, 4863
7 Przybycien, T.M. et al. (2004) Alternative bioseparation operations: life
beyond packed-bed chromatography. Curr. Opin. Biotechnol. 15,
469478
8 Gottschalk, U. (2008) Bioseparation in antibody manufacturing: the
good, the bad and the ugly. Biotechnol. Prog. 24, 496503
9 Roush, D.J. and Lu, Y. (2008) Advances in primary recovery:
centrifugation and membrane technology. Biotechnol. Prog. 24,
488495
10 Middelberg, A.P.J. (1995) Process-scale disruption of microorganisms.
Biotechnol. Adv. 13, 491551
11 Choi, J.H. and Lee, S.Y. (2004) Secretory and extracellular production
of recombinant proteins using Escherichia coli. Appl. Microbiol.
Biotechnol. 64, 625635
12 Weickert, M.J. et al. (1996) Optimization of heterologous protein
production in Escherichia coli. Curr. Opin. Biotechnol. 7, 494499
13 Swartz, J.R. (2001) Advances in Escherichia coli production of
therapeutic proteins. Curr. Opin. Biotechnol. 12, 195201
14 Clarkson, A.I. et al. (1993) A study of process interactions between cell
disruption and debris clarification stages in the recovery of yeast
intracellular products. Biotechnol. Prog. 9, 462467
15 Agerkvist, I. and Enfors, S-O. (1990) Characterization of E. coli cell
disintegrates from a bead mill and high pressure homogenizers.
Biotechnol. Bioeng. 36, 10831089
16 Ciccolini, L.A.S. et al. (1999) Rheological properties of chromosomal
and plasmid DNA during alkaline lysis reaction. Bioproc. Eng. 21,
231237
483
Review
17 Tin Lee, C. et al. (2004) Combined in-fermenter extraction and crossflow microfiltration for improved inclusion body processing. Biotechnol.
Bioeng. 85, 103113
18 Harrison, S.T.L. (1991) Bacterial cell disruption: a key unit operation
in the recovery of intracellular products. Biotechnol. Adv. 9, 217240
19 Harrison, S.T.L. et al. (1991) Combined chemical and mechanical
processes for the disruption of bacteria. Bioseparation 2, 95105
20 Anand, H. et al. (2007) The effect of chemical pretreatment combined
with mechanical disruption on the extent of disruption and release of
intracellular protein from E. coli. Biochem. Eng. J. 35, 166173
21 Bowering, L.C. (2004) Microbial systems for the manufacture of
therapeutic antibody fragments. BioProcess International 2, 4047
22 Urthaler, J. et al. (2007) Automated alkaline lysis for industrial scale
cGMP production of pharmaceutical grade plasmid-DNA. J.
Biotechnol. 128, 132149
23 Kalumuck, K.M. (2000) The use of cavitating jets to oxidize organic
compounds in water. J. Fluids Eng. 122, 465470
24 Balasundaram, B. and Harrison, S.T.L. (2006) Disruption of brewers
yeast by hydrodynamic cavitation: process variables and their
influence on selective release. Biotechnol. Bioeng. 94, 303
25 Baldwin, C.V. (1994) Enhanced disruption of Candida utilis using
enzymatic pretreatment and high-pressure homogenization.
Biotechnol. Bioeng. 43, 4656
26 Tamer, I.M. et al. (1998) Disruption of Alcaligenes latus for recovery of
poly(b-hydroxybutyric
acid):
comparison
of
high-pressure
homogenization, bead milling, and chemically induced lysis. Ind.
Eng. Chem. Res. 37, 18071814
27 Harrison, S.T.L. (1991) The disruption of Alcaligenes eutrophus by high
pressure homogenisation: key factors involved in the process.
Bioseparation 2, 155166
28 Engler, C.R. (1981) Effects of organism type and growth conditions on
cell disruption by impingement. Biotechnol. Lett. 3, 8388
29 Balasundaram, B. and Harrison, S.T.L. (2006) Study of physical and
biological factors involved in the disruption of E. coli by hydrodynamic
cavitation. Biotechnol. Prog. 22, 907913
30 Zhou, Y.H. and Titchener-Hooker, N.J. (1999) Visualizing integrated
bioprocess designs through windows of operation. Biotechnol. Bioeng.
65, 550557
31 Keshavarz, E. et al. (1990) Disruption of a fungal organism, Rhizopus
nigricans, in a high-pressure homogenizer. Enzyme Microb. Technol.
12, 494498
32 Harrison, S.T.L. et al. (1990) The effect of culture history on the
disruption
of
Alcaligenes
eutrophus
by
high
pressure
homogenisation. In Separations for Biotechnology (Pyle, E.D., ed.),
pp. 3847, Elsevier Applied Science
33 Shokri, A. et al. (2002) Growth rate-dependent changes in Escherichia
coli membrane structure and protein leakage. Appl. Microbiol.
Biotechnol. 58, 386392
34 Shokri, A. et al. (2003) Cell and process design for targeting of
recombinant protein into the culture medium of Escherichia coli.
Appl. Microbiol. Biotechnol. 60, 654664
35 Bailey, S.M. et al. (1995) Improved homogenization of recombinant
Escherichia coli following pretreatment with guanidine hydrochloride.
Biotechnol. Prog. 11, 533539
36 Mosqueira, F.G. et al. (1981) Characteristics of mechanically disrupted
bakers yeast in relation to its separation in industrial centrifuges.
Biotechnol. Bioeng. 23, 335343
37 van Hee, P. et al. (2004) Relation between cell disruption conditions,
cell debris particle size, and inclusion body release. Biotechnol. Bioeng.
88, 100110
38 Kee, G.S. et al. (2008) Study of detergent-mediated liberation of
hepatitis B virus-like particles from S. cerevisiae homogenate:
identifying a framework for the design of future-generation
lipoprotein vaccine processes. Biotechnol. Prog. 24, 623631
39 Hubbuch, J.J. et al. (2006) The influence of homogenisation conditions
on biomass-adsorbent interactions during ion-exchange expanded bed
adsorption. Biotechnol. Bioeng. 94, 543
40 Balasundaram, B. and Harrison, S.T.L. (2008) Influence of the extent of
disruption of bakers yeast on protein adsorption in expanded beds. J.
Biotechnol. 133, 360369
41 Balasundaram, B. et al. (2008) A study of the influence of yeast cell debris
on protein and a-glucosidase adsorption at various zones within the
expanded bed using in-bed sampling. Biotechnol. Bioeng. 99, 614624
484
Review
nuclease to reduce the viscosity of the bioprocess feedstock. Biotechnol.
Bioeng., DOI: 10.1002/bit22369
69 Humphreys, D.P. et al. (2004) Engineering of Escherichia coli to
improve the purification of periplasmic Fab0 fragments: changing
the pI of the chromosomally encoded PhoS/PstS protein. Protein
Expr. Purif. 37, 109118
70 Falconer, R.J. et al. (1999) Chemical treatment of Escherichia coli 3.
Selective extraction of a recombinant protein from cytoplasmic
inclusion bodies in intact cells. Biotechnol. Bioeng. 62, 455460
Trends in Biotechnology
Vol.27 No.8
485