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Click Reactions With Nitroxides-Synthesis
Click Reactions With Nitroxides-Synthesis
In addition to these monofunctional click reaction part- ples, biomolecules with an acetylene moiety were modi-
ners, cross-linking building blocks can also be accessed fied with spin-labeled azides. This idea can be inverted;
from the dibromo compound 6.19 Thus, reaction of com- for example, azido-containing biomolecules can be modi-
pound 6 with one equivalent of sodium azide in aqueous fied by paramagnetic acetylenes such as compound 4.
acetone, yielded the mixture of monoazido21 and diazido Thus, reaction of 4 with b-azido-pentaacetyl-D-glucopyr-
derivatives 7 and 8, respectively (Scheme 2). anozide (19)23 or with protected DL-4-azidophenylalanine
21,24 gave the spin-labeled carbohydrate derivative 20 and
Br Br Br N3 N3 N3 the spin-labeled DL-paramagnetic amino acid 22, respec-
a tively (Scheme 3).
+
N N N In conclusion, we have demonstrated with several exam-
O• O• O• ples that both paramagnetic azides and both paramagnetic
b c
6 7 8 acetylenes are reasonable click reaction partners. All react
with the corresponding biomolecules under mild condi-
CO2Me
MeO2SS N3 tions and the reaction can be accomplished using relative-
BocHN
ly simple procedures. The application of this [3+2]
S N3
N
cycloaddition reaction for spin-labeling of a native protein
at properly modified side chains is underway.
O•
N
9
O•
Melting points were determined with a Boetius micro melting point
10
apparatus and are uncorrected. Elemental analyses (C, H, N, S)
O•
N O
•
N
N N
OH OH N
N
a N
N
1+3
1+ a
N
RO RO R
O•
11 12, 14 13, 15 12 13 H
14 15 Me
b or c OH N OH
N
12 + 8 HO N N
N N
HO
N
O•
16
BocHN
BocHN CO2Me
Scheme 3 Reagents and conditions: (a) CuI (0.4 equiv), DMSO, 40 °C, 30–60 min (32–79%); (b) CuI (0.8 equiv), 12 (2.0 equiv), DMSO,
40 °C, 1 h (48%); (c) aq 10% CuSO4 (0.2 equiv), sodium ascorbate (2.2 equiv), DMF, r.t., 2 h, under N2, then MnO2 (1.0 equiv), O2, 15 min
(73%).
MS (EI): m/z (%) = 250 (64) [M+], 235 (11), 193 (73), 77 (100). Methyl 3-(1-Oxyl-4-azidomethyl-2,2,5,5-tetramethyl-2,5-dihy-
Anal. Calcd for C10H16N7O: C, 47.99; H, 6.44; N, 39.17. Found: C, dro-1H-pyrrol-3-ylmethylsulfanyl)-2-tert-butoxycarbonylami-
47.89; H, 6.35; N, 39.21. nopropionate Radical (10)
A mixture of compound 7 (286 mg, 1.0 mmol) and N-(tert-butoxy-
3-Azidomethyl-4-methanethiosulfonylmethyl-2,2,5,5-tetra- carbonyl)-L-cysteine methyl ester (235 mg, 1.0 mmol) and K2CO3
methyl-2,5-dihydro-1H-pyrrol-1-yloxyl Radical (9) (138 mg, 1.0 mmol) in CHCl3 (10 mL) was stirred under reflux for
To a solution of compound 7 (286 mg, 1.0 mmol) in acetone (10 1 h. After cooling, the inorganic salts were filtered off and washed
mL) and H2O (3 mL), NaSSO2CH3 (270 mg, 2.0 mmol) was added with CHCl3 (5 mL). The filtrate was washed with brine (10 mL),
and the solution was heated at 50 °C until complete consumption of and the organic phase was dried (MgSO4), filtered and evaporated.
starting material was observed (~30 min). After cooling, the acetone The residue was purified by flash column chromatography (hex-
was evaporated off, H2O (7 mL) was added and the aqueous phase ane–EtOAc, 2:1) to yield compound 10.
was extracted with CHCl3 (2 × 10 mL). The organic phase was dried Yield: 212 mg (48%); yellow oil; Rf = 0.30 (hexane–EtOAc, 2:1);
(MgSO4), filtered and evaporated, then the residue was purified by [a]D25 –17.6 (c 0.49, MeOH).
flash column chromatography (CHCl3–Et2O, 2:1) to give the title IR (neat): 3330 (NH), 2105 (N3), 1730, 1700 (C=O) cm–1.
compound.
MS (EI): m/z (%) = 442 (48) [M+], 412 (1), 299 (4), 182 (37), 150
Yield: 188 mg (59%); orange solid; Rf = 0.27 (CHCl3–Et2O, 2:1); (90), 57 (100).
mp 32–34 °C.
Anal. Calcd for C19H32N5O5S: C, 51.57; H, 7.29; N, 15.82. Found:
IR (Nujol): 2100 (N3), 1650 (C=C) cm–1. C, 51.55; H, 7.38; N, 15.66.
MS (EI): m/z (%) = 319 (5) [M+], 305 (4), 166 (12), 79 (100).
Anal. Calcd for C11H19N4O3S2: C, 41.36; H, 6.00; N, 17.54. Found: Cu-Catalyzed 1,3-Dipolar Addition; General Procedure
C, 41.18; H, 6.02; N, 17.50. A solution of azide 1, 8, 19 or 21 (2.0 mmol) and acetylene 3, 4, 12,
14 or 17 (2.0 mmol or 4. 0 mmol for reaction with 8) and CuI (152
mg, 0.8 mmol or 304 mg, 1.6 mmol for compound 8) was heated to
40 °C in DMSO (8 mL) and kept at this temperature until complete Yield: 538 mg (32%); beige solid; mp 220–222 °C; Rf = 0.50
consumption of starting materials was observed (indicated by TLC; (CHCl3–MeOH, 4:1); [a]D25 +63 (c 0.17, MeOH).
30–60 min). The solution was diluted with H2O (30 mL) and the IR (Nujol): 3350 (OH), 1655 (C=C) cm–1.
precipitate was filtered and purified further by flash column chro-
matography. When no precipitation occurred, the mixture was ex- MS (ESI): m/z = 843 [M + H]+.
tracted with EtOAc (2 × 10 mL) and the organic phase was dried Anal. Calcd for C50H64N7O5: C, 71.23; H, 7.65; N, 11.63. Found: C,
(MgSO4), filtered and evaporated. The residue was purified by flash 71.05; H, 7.54; N, 11.68.
column chromatography (CHCl3–Et2O, 2:1 or CHCl3–MeOH, 9:1)
Method B: A mixture of diazide 8 (125 mg, 0.5 mmol), a-ethy-
to yield compounds 13, 15, 16, 18, 20 or 22 as solids in 32–79%
yields. nylestradiol 12 (296 mg, 1.0 mmol), sodium L-ascorbate (217 mg,
1.1 mmol) and 10% aq CuSO4 (0.16 mL, 0.1 mmol) in DMF (7 mL),
4-{1-(1-Oxyl-2,2,6,6-tetramethylpiperidin-4-yl)-1H-[1,2,3]tri- was stirred under N2 at r.t. for 2 h. The mixture was poured onto a
H2O-ice mixture (30 mL) and allowed to reach r.t. The mixture was
azol-4-yl}-2,2,6,6-tetramethyl-1,2,3,6-tetrahydropyridin-1-yl-
filtered and the collected solid was washed with H2O (10 mL). The
oxyl Biradical (11)
Compounds 1 (2.0 mmol, 394 mg) and 3 (356 mg, 2.0 mmol) were solid was dried at r.t. then dissolved in a mixture of CHCl3–MeOH
(2:1, 30 mL), MnO2 (43 mg, 0.5 mmol) was added and O2 was bub-
used to obtain compound 11, which was purified by column chro-
matography (CHCl3–Et2O, 2:1). bled through for 15 min. The MnO2 was filtered off and the solvent
was removed under vacuum to afford compound 16 with the same
Yield: 420 mg (56%); pink solid; mp 129–132 °C; Rf = 0.23 spectroscopic and physical data as listed above for Method A.
(CHCl3–Et2O, 2:1).
Yield: 307 mg (73%); beige solid.
IR (Nujol): 1675 (C=N), 1650 (C=C) cm–1.
ESR (10–4 M solution in H2O containing 1% MeOH) consisted of Methyl (S)-2-tert-Butoxycarbonylamino-3-[{1-(1-oxyl-2,2,6,6-
11 lines of 5:12:13:1:5:12:5:1:13:12:5 intensity ratio. tetramethylpiperidin-4-yl)-1H-[1,2,3]triazol-4-yl}methyl-
thio]propionate Radical (18)