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Biology Unit 1 Retake Revision Notes - Not Corrupt
Biology Unit 1 Retake Revision Notes - Not Corrupt
2) Explain the importance of water as a solvent in transport, including its dipole nature
Monosaccharides:
Made up of 1 sugar molecule only
Glucose, Fructose and Galactose
No bond
Disaccharides:
2 monosaccharides joined together
condensation reaction
joined by a glycosidic bond
can be split through hydrolysis reactions
Maltose
used for energy/food source in seeds
alpha glucose + alpha glucose
Sucrose
form in which sugars are transported in plants
alpha glucose + fructose
Lactose
carbohydrate source in mammalian milk
alpha glucose + galactose
Polysaccharides:
Many monosaccharides joined together
Condensation reaction
Glycosidic bonds
Starch = polymer of glucose
Glycogen = polymer for alpha glucose
Cellulose = polymer of beta glucose
Starch:
Make from 2 molecules in combination, amylose & amylopectin
Both made from alpha glucose
Found in amyloplasts inside plant cells for energy storage
Amylose
o Long unbranched chains
o 1-4 glycosidic bonds only
o coiled structure (compact)
o slow energy release because no branches, takes longer to break glycosidic bonds
Amylopectin
o Long branched chains
o 1-4 and 1-6 glycosidic bonds
o side branches allow enzymes that digest the molecule to get at the glycosidic
bonds more easily (glucose is released faster)
5) Describe the synthesis of a triglyceride by the formation of ester bonds during condensation
reactions between glycerol and three fatty acids and recognize differences between saturated and
unsaturated lipids
Triglycerides:
Made up of glycerol and fatty acids
Ester bonds
Formed through condensation polymerization reaction
Used for storage, insulation, protection in fatty tissue
Cannot be mobilized quickly as they are insoluble
Not good for quick energy requirements
When oxidized they yield more energy then any other compound
Good for energy storage
6) Explain why many animals have a heart and circulation (mass transport to overcome limitations
of diffusion in meeting the requirements of organisms)
Unicellular organism don’t need transport system, as they rely on diffusion to excrete waste and
absorb nutrients due to their high SA:Vol ratio
Animals with a closed circulatory system have either single or double circulation.
7) Describe the cardiac cycle (atrial systole, ventricular systole and diastole) and relate the
structure and operation of the mammalian heart to it’s function, including major blood vessels.
Cardiac Cycle
Diastole:
Blood at low pressure in the veins flows into the atrium
Increases pressure inside empty atrium as they fill
As pressure increases, some of the blood trickles through the atrioventricular valves into
the relaxed ventricles below
Atrial Systole:
When atria are full their walls contract
Blood is pushed through the valves into the ventricles
Ventricles fill with blood
Valvles in vena cava & pulmonary veins snap shut to prevent backflow of blood from
atria to viens
Ventricular Systole:
Ventricles contract from apex (base) upwards
Pressure inside ventricles increases
as pressure in ventricles > pressure in atria blood pushes against atrioventricular valves,
shutting them and preventing back flow (first heart sound)
Semilunar valves open under pressure and blood leaves the heart
Ventricle relaxed (diastole) and the semilunar valves snap shut behind the blood (second
heart sound)
8) Explain how the structures of blood vessels (capillaries, arteries and veins) relate to their
functions.
Arteries
Can withstand high pressure due to thick walls of elastic fibres and smooth muscle
(allow walls to stretch as blood surges through)
As artery increases in diameter, pressure is reduced. After they ‘give’, elastic fibres recoil
and pressure increases
Large artery splits into smaller arterioles then branch into many capillaries. Arterioles
have a similar structure but more smooth muscle and less elastic tissue (they don’t need
to withstand as much pressure)
Arterioles have ability to contract to regulate blood flow to tissue
Small lumen
Carries blood away from heart
Capillaries
Tiny gaps between the cells making up the wall to allow substances to leave the blood
via diffusion (thin endothelium)
Used in diffision – network of capillaries, short diffusion pathway
Relatively large lumen
Link the veins and arteries
No elastic fibres, muscle or collagen in walls (rapid diffusion)
One endothelial cell thick
Veins
Valves present to prevent backflow
Pressure is low
Large lumen
Thin layer of smooth muscles with few elastic fibres
Carries blood towards the heart
Semi-lunar valves
Base on aorta
Prevents backflow
Open during atrial systole
Elastic fibres
In the muscle layer
Allows stretching
Prevent damage of aorta
10) Describe the blood clotting process (thromboplastin release, conversion of prothrombin to
thrombin and fibrinogen to fibrin) and it’s role in CVD (cardiovascular disease)
11) Explain the course of events that leads to atherosclerosis (endothelial damage, inflammatory
response, plaque formation, raised blood pressure)
Atherosclerosis is the degeneration of artery walls. It is caused by the narrowing and stiffening of
the arteries due to fatty deposits known as ‘atheroma’, gathering in the artery walls.
Healthy arteries:
pale
smooth linings
elastic and flexible
Unhealthy arteries:
strands of yellow fat deposited under endothelium
fat builds up from certain lipoproteins and cholesterol
fibrous tissue is layered
deposits start to impede blood flow
raise blood pressure
thickening of artery walls
reduced elasticity
Atheroma:
A fatty deposit that builds up along the artery wall
o takes many years to develop
o can lead to CHD or myocardial infarction
more likely to develop if an artery has been damaged in some way
more likely if high blood pressure
often in artery branches
Foam Cells:
Macrophages engulf cholesterol droplets by phagocytosis these appear white and foamy. Foam
cells invade artery walls and form fatty plaques. The plaques build up and narrow the lumen of the
vessel. Plaque also contains dead, smooth muscle cells and fibres.
Angina:
Condition caused by atheroma. Coronary arteries narrowed which means a low supply of glucose &
oxygen. Can cause severe chest pains when exercising. Pain usually felt in left shoulder, chest and
arm. Sometimes in neck and left side of face.
12) Describe the factors that increase the risk of CVD (genetic, diet, age, gender, high blood
pressure, smoking and inactivity)
13) Describe the benefits and risks of treatments for CVD (antihypertensives, plant statins,
anticoagulants and platelet inhibitory drugs)
14) Analyse and interpret data on the possible significance for health of blood cholesterol levels
and levels of high-density lipoproteins and low-density lipoproteins. Describe the relationship for
a causal relationship between blood cholesterol levels and CVD
Low-Density Lipoproteins:
Mainly cholesterol. Made up of saturated fats and proteins. These cause deposits of
plaque around the body
High-Density Lipoproteins:
More protein and less cholesterol. They move cholesterol round the body and remove
cholesterol from blood and can help break down plaques.
17) Analyse data on energy budgets and diet so as to be able to discuss the consequences of
energy imbalance, including weight loss, weight gain and development of obesity.
Energy Budgets
The higher your blood cholesterol, the greater the risk of CHD. Cholesterol isn’t soluble in water, so
in order for it to be transported around the blood, insoluble cholesterol must combine with proteins
to form soluble phospholipids. Obesity and diabetes increases risk of CHD.
BMI = Mass (kg)
Height2 (m)
>20 = underweight
20-25 = normal
25-30 = overweight
30-40 = obese
<40 = morbidly obese
18) Analyse and interpret quantitive data on illness and mortality rates to determine health risks
(including distinguishing between correlation and causation and recognizing conflicting evidence)
19) Evaluate design of studies used to determine health risk factors (including sample selection
and sample size used to collect data that is both valid and reliable)
20) Explain why people’s perceptions of risks are often different from the actual risks (including
underestimating and overestimating the risks due to diet and other lifestyle factors in the
development of heart disease)
2) Explain how models such as the fluid mosaic membrane of cell membranes are interpretations
of data used to develop scientific explanations of the structure and properties of cell membranes
Osmosis in cells:
The movement of water from a region of high concentration of water to a region of low
concentration of water, across a partially permeable membrane. Osmotic concentration only
concerns solutes that have an osmotic effect (no large insoluble molecules).
Isotonic solution: same osmotic concentration as cell
Hypotonic solution: osmotic concentration of solutes lower than in cytoplasm of cells
Hypertonic solution: osmotic concentration of solutes higher than in cytoplasm of cells
Cellulose cell walls: prevents cells bursting – if surrounding fluid is hypotonic, water
enters through osmosis. As cytoplasm swells, inward pressure of cell wall on cytoplasm
increases until it cancels out the tendency of water molecules to move in. Plant cell is
now turgid.
4) Explain what is meant by passive transport (diffusion, facilitated diffusion), active transport
(including the role of ATP), endocytosis and exocytosis and describe the involvement of carrier and
channel proteins in membrane transport.
Diffusion: no metabolic energy is expended. Small, non-polar molecules such as oxygen and CO2
rapidly diffuse across a membrane. Small polar molecules such as water and urea diffuse across via
osmosis much more slowly. Charged particles cannot diffuse even if it’s small.
Facilitated Diffusion: for large and/or hydrophilic particles such as glucose, amino acids. The
movement of molecules from a region of a high concentration to a region of low concentration
through either channel or carrier proteins. No energy is required.
Some particles like ions diffuse through channel proteins within the membrane. Particles diffuse in
or out depending on the concentration gradient. Some of the channel proteins (gated channel
proteins) may open or close in response to a messenger.
Other particles such as glucose diffuse through carrier proteins. The particle binds to the protein and
changes in shape and pump the molecule/ion into the cell.
Osmosis: the net movement of solvent molecules from a region of high concentration to a region of
low concentration, through a partially permeable membrane.
6) Describe the properties of gas exchange surfaces in living organisms (large surface area to
volume ratio, thickness of surface, difference in concentration) and explain how the structure of
the mammalian lung is adapted for rapid gaseous exchange
7) Describe the basic structure of an amino acid (structures of specific amino acids are not
required) and the formation of polypeptides and proteins (as amino acid monomers linked by
peptide bonds in condensation reactions) and explain the significance of a protein’s primary
structure in determining it’s 3D structure and properties (globular and fibrous proteins and types
of bonds involved in 3D structure)
R group represents side of chain from central ‘alpha’ carbon. 2 amino acids join together to form a
dipeptide, joined by a peptide bond.
Fibrous Proteins: Little of no tertiary structure. Long, parallel polypeptide chains with occasional
cross-linkages. Insoluble and very tough, so ideal for structural functions. Found in connective tissue,
collagen, keratin (hair & nails) and structure of muscles.
Globular Proteins: complex tertiary structure and sometimes quaternary. Folded into spherical
shapes. Their large shapes affects behaviour in water; they form a colloid. Plays important role in
holding molecules in position in the cytoplasm. Also important for your immune system (antibodies).
They also form enzymes and some hormones.
8) Explain the mechanism of action and specificity of enzymes in terms of their 3D structure and
explain that enzymes and biological catalysts that reduce activation energy, catalyzing a wide
range of intracellular and extracellular reactions
10) Describe the basic structure of mononucleotides (as a deoxyribose or ribose linked to a
phosphate and a base, i.e thymine, uracil, cytosine, adenine or guanine) and the structures of DNA
and RNA (as polynucleotides composed of mononucleotides linked through concentration
reactions) and describe how complementary base pairing and the hydrogen bonding between 2
complementary strands are involved in the formation of the DNA double helix.
Structure of DNA
1 unit of DNA is a mononucleotide, which is made up of 3 things:
pentose sugar (deoxyribose)
phosphate group
nitrogenous base (adenine, guanine, thymine and
cytosine)
Adenine = Thymine
Guanine = Cytosine
11) Describe the DNA replication (including the role of DNA polymerase) and explain how
Meselson and Stahl’s classic experiment provided new data that supported the accepted theory of
replication of DNA and refuted competing theories.
Semi-Conservative Hypothesis:
E.coli bacterium grown in presence of radioactive 15N until culture was obtained
Subculture of labeled bacterium transferred for growth in presence of normal 14N. We
know generation time of E.coli, so we can take samples from 1st 2nd and 3rd generations
Each sample’s DNA extracted and centrifuged in a caesium chloride solution causing
DNA to sediment out
The heavier the DNA, the further down it was in the centrifuge tube. 15N is heavier than
14N
Original 15N DNA moved down to the lowest possible position in the tube
After one generation all DNA moved to an intermediate position, indicating presence of
only mixed 14N and 15N (because DNA contained 1 strand of parent molecule and 1
new strand of 14N)
In 2nd generation only half the DNA was intermediate and half was light, for the same
reason
Refuted theories: the parent DNA molecule breaks into segments and new nucleotides fill in the
gaps – fragmentation theory
The complete DNA molecule acts as a template for the new daughter molecule. Parent’s molecule is
unchanged – conservative hypothesis
DNA Replication:
DNA helicase untwists and unzips DNA. Hydrogen bonds are broken
DNA polymerase catalyses free addition of free complimentary nucleotides to exposed
bases
This joins mononucleotides together forming phosphodiester bonds down one strand
The DNA strand twists as hydrogen bonds are formed, and the DNA is genetically identical (in RNA,
adenine is replaced by uracil not thymine)
13) Describe a gene as being a sequence of bases on a DNA molecule coding for a sequence of
amino acids in a polypeptide chain
14) Outline the process of protein synthesis, including the role of transcription, translation and
messenger RNA, transfer RNA and the template (antisense) DNA strand
Transcription:
Happens in the nucleus
DNA helicase untwists and unzips DNA molecules. Hydrogen bonds are broken
Complimentary RNA nucleotides are added to the antisense strand (A=U, G=C)
Condensation reaction occurs in the sugar phosphate backbone of the RNA strand
Phosphodiester bonds are formed
RNA polymerase catalyses this
Translation:
mRNA leaves the nuclease via nuclear pores
mRNA heads to a ribosome
tRNA comprising of a complimentary anticodon arrives at the start codon on mRNA
At the opposite side to the anticodon is an amino acid
A 2nd tRNA with a 2nd complimentary anticodon arrives
When the 2 amino acids are close, condensation reaction occurs
Peptide bond forms between amino acids
First tRNA leaves the ribosome
Ribosome moves along the mRNA
Process repeats
15) Explain how errors in DNA replication can give rise to mutations and explain how cystic fibrosis
results from one of a number of possible gene mutations
Mutations
Addition mutation: Base is added to DNA (frame shift)
Deletion mutation: Base is deleted from DNA (frame shift)
Substitution mutation: wrong base is inserted into DNA (point mutation)
Frame shift mutation: they ultimately change the codons in mRNA that are formed during
transcription. This can lead to wrong amino acids being inserted into translation which can affect the
overall 3D shape of a protein
Point mutation: may only cause change in 1 amino acid, but can still be detrimental. Some codons
may code for the same amino acid so may not mutate.
Mutagenic agents cause DNA molecules to break, when the cells try to repair these breaks, errors
can occur.
16) Explain the terms gene, allele, genotype, phenotype, recessive, dominant, homozygote and
heterozygote, and explain monohybrid inheritance, including the interpretation of genetic
pedigree diagrams, in the context of traits such as cystic fibrosis, albinism, thalassaemia, garden
pea height and seed morphology.
Phenotype: Physical characteristics that are shown by the individual, determined by the
combination of alleles that are inherited
Genotype: Combination of alleles that are inherited from each parent
Allele: A different form of the same gene
Gene: A sequence of bases located at a specific position on a chromosome. Codes for a polypeptide
or protein
Heterozygous: This individual will inherit two different alleles of a certain gene
Homozygous: This individual will inherit two indentical alleles of a certain gene
Dominant: Only one allele needs to be inherited for this phenotype to be displayed
Recessive: 2 alleles must be inherited for this phenotype to be displayed
17) Explain how the expression of a gene mutation in people with cystic fibrosis impairs the
functioning of the gaseous exchange, digestive and reproductive systems.
Cystic Fibrosis: a disease that affects the respiratory and digestive systems by producing abnormally
thick mucus. Can also affect the reproductive systems. It is recessive mutation on chromosome 7 in
the CFTR gene. Mutations in CFTR – most common is a deletion of one amino acid at position 508 in
the CFTR protein.
CFTR protein doesn’t fold correctly
It will no longer allow Cl- to leave the top of the cell
The Na+/Cl- pump is unaffected and continues to pump Cl- in and Na+ out
Cl- accumulates in the cell
Concentration of solutes inside cell increases. Water potential is low
Water moves out of the mucus and into the cell to balance the concentration of solutes
Mucus thickens
Bacteria remain trapped in mucus and they reproduce, as it is warm and moist. Leads to
lung infections.
Symptoms: Breathlessness & coughs, repeated chest infections. Mucus clogs pancreatic duct and
blocks enzyme secretion, leading to poor digestion, causing low weight gain and low energy levels.
Sperm duct and oviducts may become blocked.
18) Describe the principles of gene therapy and distinguish between somatic and germ line
therapy
Somatic Gene Therapy: genetic defect is corrected only in affected cells. Works by cloning the
normal version of the gene then introducing this gene into suitable vector (adenovirus/liposome).
So, new DNA is transcribed and translated to make a new normal protein. 3 different ways:
1) disarm the retrovirus, whereby most of the virus genes have been removed.
The natural cycle of the retrovirus involves integration into the host
genome. This could cause a mutation. Also attacks proliferating cells such as
RBCs.
2) Through the use of the adenovirus which normally attacks respiratory
epithelia, injecting it’s genome into the epithelium cells. Viral genome does
not integrate into a chromosome but persists extra-chromosomally in the
cells. This eliminated the problem of a random mutation.
3) Liposomes are small vesicles composed of phospholipids. The normal gene is
contained within the vesicle (usually within a plasmid). They are put in a
plasmid to increase the stability of the gene. Vesicle fuses with cell
membrane and delivers the gene to the cell.
Somatic gene therapy can target one particular tissue. The cure is not passed onto offspring. This
must be repeated every 2 weeks as cells die and are replaced with faulty cells.
19) Explain the uses of genetic screening: identification of carriers, preimplantation genetic
diagnosis and prenatal testing (amniocentisis and chrorionic villus sampling) and discuss the
implications of prenatal genetic screening
Pre-natal testing
Amniocentesis:
Carried out at 14-16 weeks of pregnancy
Fine needle inserted into uterus through abdomen. Amniotic fluid withdrawn
Foetal cells found in fluid are cultured for min. 4 weeks
A karyotype analysis looks for abnormal chromosome numbers
FISH uses fluorescent marker to identify faulty gene
0.5-1% risk of miscarriage
Chorionic Villus Samping (CVS):
Small sample of cells taken from chorionic villus
Catheter inserted into vagina to the uterus
Test carried out 8-12 weeks into pregnancy
2% risk of miscarriage
Pre-implantation genetic diagnosis (PGD):
Only offered if there is family history of genetic disorder
Embryo must be created by IVF
Involves removing a cell from an embryo at 8-cell stage of development and testing it for
disorders
Only unaffected embryos implanted into womb, rest discarded
Ethics: false positives/negatives. Abortion. Impact on parents