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Microbiology Last Moment Revision PDF
Microbiology Last Moment Revision PDF
Bacteria and blue green algae are Prokaryotes while fungi, algae, slime moulds and
protozoa are Eukaryotes.
The types of staining that may be toxic and that which kills bacteria is called
supravital staining.
Bacteria have an affinity to basic dyes due to acidic nature of protoplasm.
Acid fast staining discovered by Ehrlich and modified by Zeil and Neelssen.
Cultural media may be a complex medic if ingredients are added for special purpose
of growth.
IMMUNITY
Refers to resistance exhibited by host towards injury caused by
microorganisms and their products.
Innate immunity is inborn.
Acquired immunity may passive and active immunity.
Active immunity developed by an individual due to antigenic stimulus . once
developed it is long lasting.
In PASSIVE immunity no antigenic stimulus; preformed ontibodies are administered.
An antigen has been defined as any substance when introduced parenterally into the
body stimulates the production of antibodies. The smallest unit of antigenicity is
called an epitope
Antibodies are immunoglobulins
IgG :- this is major serum immunoglobulin. Its level is raised in chronic malaria, kala
azar, or myeloma. IgG is only maternal immunoglobulin that is normally transported
across the placenta and provides natural passive immunity in newborn.
IgA:-it is the second most abundant class of immunoglobulin seen in body fluids such
as colostrums, saliva and tears.
IgM:- is called ‘millionaire” molecule. It is not transported across the placenta hence
presence of IgM in the foetus or newborn indicates diagnosis of congenital infection
such as syphilis, rubella, HIV and toxoplasmosis.
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IgM antibodies are short lived, hence their presence in serum indicates recent
infection.
IgE:- greatly elevated in atopic (Type I allergy) conditions such as asthma, hay
fever, eczema, and also in children having high load of intestinal parasites.
In general
IgM – protects body fluids
IgA – protects body surfaces
IgM – protects blood stream
IgE - mediates reagenic hypersensitivity
Bence jones proteins are abnormal light chain immunoglobulins seen in multiple
myeloma.
Coomb’s test – antiglobulin test- dirct commb’s test is positive in haemolytic disease
of newborn due to Rh incompatibility
Indirect commb’s test is positive in Brucellosis
STAPHYLOCOCCUS
Gram positive
Occurs in ‘grape like clusters’
Enzyme coagulase present
It causes LOCALISED SUPPURATIVE LESIONS
Common culture media is nutrient ogar and organization shows ‘oil –paint’
appearance in medica. Main exotoxins of S.aureus are cytolytic toxin, enterotoxin
and exfoliative toxins. Entero toxin causes staphylococcal food poisoning (milk
and milk products are responsible for common food items)
Exfoliative toxins causes TSS (toxic shock syndrome)
And SSSS - Staphylococcal scalded skin syndrome- seen in infants – Ritter’s
disease
PATHOGENESIS
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- Localized skin lesions including furuncles, styes, boils, abscesses,
carbuncles, impetigo.
- Sepsis in burns and wounds
- Acute osteomyelitis
- Tonsillitis, pharyngitis, pneumonia, especially bronchopneumonia
secondary to some respiratory infections
- Breast abscess in lactating mothers
- Tropical myositis- in young adults of tropics multiple abscess in voluntary
muscles.
- In staphylococcal food poisoning diarrhea and vomiting starts with in 6
hours of taking contaminated food
- Exfoliative diseases such as impetigo, pemphigus neonatorum, Ritter’s
disease, toxic epidermal necrolysis.
- Non pathogenetic staphylococci- staphylococcus epidermitidis
STREPTOCOCCI
Gram positive
It causes SPREADING PYOGENIC INFECTIONS and non suppurative lesions sucj as
rheumatic fever and glomerulonephritis
3 types
Alpha haemolytic s.cocci
Beta haemolytic s.cocci
Gamma haemolytic s.cocci (non haemolytic)
Streptococci form several exotoins and ensumes. The two haemolysins are
haemolysin ‘O’ and ‘S’.
Streptolysin ‘O’ is oxygen labile. Streptolysin regularly appear in sera following
streptococcal infection - ASO tite
Strepto lysine S is not antigenic
Erythrogenic toxin is also called Dick , scarlatinal or pyrogenic toxin.
DICK TEST:- this test is used to identify children susceptible to scarlet fever (scarlet
fever is a type of acute pharyngitis with extensive rash caused by str.pyogens
PATHOGENESIS
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- In rheumatic fever, a connective tissue degeneration of heart valve and
inflammatory myocardial leisions causes Aschoff nodules
- Str. Viridans normally residing in mouth and upper respiratory tract
PNEUMOCOCCI
It is gram positive
Single most prevalent bacterial genera in pneumonia, otitis media, acute sinusitis,
meningitis, and other infectious processes
Cultural characters :- on blood agar draughtsman or carom coin appearance. It
exhibits capsule swelling reaction called quelling reaction.
The toxins are oxygen labile haemolysin and a leucosidin
PATHOGENESIS
-Lobar pneumonia
- Bronchopneumonia following viral infections
- Acute exacerbation of chronic bronchitis (haemophilus influenza also causes this)
- Empyema, pericarditis, ASOM, otitis media, sinusitis, conjunctivitis, suppurative
arthritis
NEISSERIA
Gram negative cocci
N.meningitidis
Causes meningococcal meningitis or cerebrospinal fever
Oval or spherical in shape
Grows only on enriched media such as blood agar, chocolate agar
Modified Thayer-Martin media is a useful selective media
PATHOGENESIS
Cerebrospinal meningitis
Meningococcal septicemia
In meningococcal septicemia there occurs adrenal haemorrhage and shock. This is
Water house – Frederickson syndrome
N. gonorrhoea
Causes veneral disease gonorrhoea. Here also Thayer – Martin media is
used.
PATHOGENESIS
Gonorrhoea is acquired by sexual contact. c/c urethritis lead to stricture
formation. The may spread to periurethral tissue causing abscess and multiple
discharging sinuses. (Water can perineum)
- In women causes Bartholinitis and salpingitis
- Proctitis, conjunctivitis, arthritis, ulcerative endocarditis and meningitis
- Non veneral infection is gonococcal ophthalmia in newborn
CORYNE BACTERIA
Gram positive
Non acid fast, non motile rods
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C.diphtheria :- syn. (Loffler’s bacillus)
Having Chinese letter of cuneiform arrangement
Usual media - Loeffler’s serum slope and tellurate blood agar
3 types –
Gravis – most fatal infections
Intermediate
Mitis
PATHOGENESIS
Site of infection
1. Faucial
2. Laryngeal
3. Nasal
4. Otitic
5. Conjunctival
6. Genital
7. Cutaneous
-Faucial diphtheria is the commonest type. Classified into malignant or hyper toxic
diphtheria in which there is sever toxaemia with marked adenitis – bull neck. Death
occurs due to circulatory failure.
-Septic- which leads to ulceration, cellulitis, gangrene
- Haemorrhagic – characterized by bleeding from edge of membranes
BACILLUS
Rod shaped bacteria
2 types
Aerobic bacilli and anaerobic bacillus
Gram positive
B.anthracis :- first pathogenic bacteria observed under microscope and it is the first
bacillus to be isolated in pure culture and first bacterium used for preparation of
attenuated vaccine.
M-Fayden’s reaction:- used for presumptive diagnosis of anthrax in animals
Culture media:- on agar media frosted glass appearance with locks of matted hair
called medusa head appearance, on gelatin slab having ‘inverted fir tree’ appearance
when grown on solid media ‘ strings of pearl reaction’.
ANTRAX is a zoonosis
3 types
1. Cutaneous 2. Pulmonary 3. Intestinal
All types leads to fatal septicemia.
Cutaneous anthrax
Follows infection through skin. Leisions are called ‘malignant pustule’ or black eschar
Disease is common in dock workers carrying loads of hides and skins on bare back.
Hence called hide porter’s disease.-
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PULMONARY ANTHRAX:-
Wool sorter’s disease due to inhalation of dust from infected wool. There is
haemorrhagic pneumonia. Haemorrhagic meningitis is a complication.
Bacillus cereus – causes food borne disease characterized by diarrhea and abdominal
pain associated with consumption of cooked rice, usually fried rice from Chinese
restaurant.
CLOSTRIDIUM
Gram positive
Anaerobic sphere forming bacilli
Genus responsible for 3 major diseases
1. Gas gangrene. 2. Food poisoning 3. Tetanus
Spores may be central or equatorial. Eg. Cl. Bifermingens
Useful media
Robertson’s cooked meat broth
cl. perfingens - Gas gangrene (malignant oedema)
Wound contamination
Septic abortion
Anaerobic myositis
Food poisoning and
Necrotizing enteritis
In litmus reaction fermentation of lactose causes stormy fermentation
cl. perfingens show ‘Nagler reaction’ due to specific lecithinase effect
cl.noviji (cl.oedematiens)
Also causes gangrene characterized by high mortality and large amount of
oedema fluid with little or no observable gas.
Clostridium tetani
Drumstick appearance
Media: robertson’s cooked meat broth
2 toxins: tetanolysin which is haemolysin and tetanospasmin which is a powerful
neurotoxin
Tetanus toxins block synaptic inhibitors in spinal cord. While strychnine acts post
synaptically.
Abolition of spinal inhibition causes uncontrolled spread of impulses initiated any
where in CNS. This results in muscle rigidity and spasm.
Sometimes tetanus may be due to local suppuration called otogenic tetanus.
Clostridium botulinum
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Causes food poisoning – exotoxin is responsible for pathogenicity. It acts by
blocking acetylcholine at synapse and neuromuscular junction. Hence onset
marked by diplopia, dysphagia and dysarthria
Botulinum – 3 type
1. Food borne botulism
2. Wound botulism
3. Infantile botulism
E coli- pathogenesis
Neonatal meningitis
Septicemia
Clinical features:
1. UTI
2. Pylonephritis and hypertension in pregnant women
For diagnosis - Mid stream urinalysis
ENTEROBACTERIA
Shigella causes bbacillary dysentery
Short incubation period – 1-7 days; usually 48 hours
Enterobacteria - Salmonella
Salmonella typhi:- causes typhoid fever.
Slamonella gastroenteritis
Poultry, meat, milk, cream and eggs
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Short incubation period – less than 24 hours
VIBRIO
Gram negative; comma shaped
Described by Koch as ‘fish in stream’ vibrio colonies are identified by ‘string test’
Biochemical reaction- cholera rod reaction
In cholera – watery diarrhea, vomiting with hypovolumic shock and death in less
than 2 hours
PSEUDOMONAS
Bacillus pyocyanius
Gram negative
Pyocyanis forms blue pus ; self limiting illness - shanghai fever
HAEMOPHILUS INFLUENZAE
Gram negative bacillus
Cultural media is blood agar and shows Satelletism in media
Pathogenesis
Meningitis
Otitis media
Pneumonia
Arthritis
Endocarditis, pericarditis
Bronchitis
Haemophilus ducreyi
Cause chancroid or soft sore. Veneral disease. Bacilli are arranged in groups called
school of fish or rail road track appearance
BORDETELLA PERTUSIS ( bordet- gengou glycerine –potatoe blood agar
‘Bisected pearls’ or mercury drops’ with ‘aluminium paint’ appearance
Pathogenesis: Pertusis or whooping cough.
BRUCELLA
Acute brucellosis ; undulant fever
Malta fever
Relapsing fever
Caused by B. melitensis – Brucellosis is primarily a disease of reticuloendothelial
system
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Lab investigation:- castinada method of blood culture.
MYCOBACTERIUM TUBERCULOSIS
Gram positive
Acid fast bacillus
LEPROSY
Caused by gram positive mycobacterium leprae. Organism is arranged in
parallel rows are having ‘cigar bundle’ appearance. Masses of bacilli are called globi.
The globi appear in virchow’s lepra cell or foamy cell
SPIROCHAETES
Treponema pallidum causing syphilis
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Treponema pertenue causes yaws
Treponema carateum causes pinta
Staining reaction is silver impregnation method
Syphilis is a veneral disease
Primary lesion is chancre
Lymph nodes are characteristically rubbery in consistency
Secondary syphilis starts after 2-6 weeks, characterized by roseolar skin rashes
After secondary syphilis there is a stage of latent syphilis. During this period
diagnosis is possible by serological test. There occurs cardiovascular lesions including
aneurysm.
Tertiary syphilis – delayed hypersensitivity reaction mainly tabes dorsalis and
general paralysis of insane.
BORELLIA
Causes relapsing fever
2 types
Louse borne relapsing fever
Tick borne relapsing fever
Louse borne relapsing fever is caused by Borellia recurrentis
Borellia vincenti causes ulcerative gingivostomatitis or oropharyngitis called –
vincent’s angina or cancre oris
Borellia burgdorferi causes lyme disease
Rat bite fever caused by spirillum minus or streptobacillus moniliformis
LEPTOSPIRA
Leptospira icterohaemorrhagica causes Weil’s disease which causes hepatorenal
damage.
Antibodies appear in serum towards the end of first week of disease and increase till
4th week. Caonicola fever is caused by leptospira canicola.
MYCOPLASMA
Smallest free living microorganism. Organism in colony have ‘fried egg’ appearance.
Mycoplasma causes pneumonia and genital infection especially of children and
adolescents.
ACTINOMYCETES
Gram positive. Between bacteria and fungi
It causes ‘lumpy jaw’ in cattle.
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3. Abdominal
Pelvic actinomycosis is associated with the use of IUCD (intra uterine
contraceptive device)
Helicobacter pylori associated with antral gastritis and peptic ulcer disease.
Legionella pneumonia is caused by Legionella pneumophilia. Human infection is
typically caused by inhalation of aerosols produced by airconditioners and shower
heads.
RICKETTSIAE
Gram negative organism
Weil – Felix raction used for diagnosis of rickettsial infection.
Scrub typhus
Rickettsiae tsu tsu gambusti
Epidemic typhus
Rickettsiae prowazekii (vector is louse or pediculus humanis)
Recrudescent typhus is activated latent infection called Brill- Zeinsser disease
Rocky mountain spotted fever - Rickettsia rickettsi
Endemic typhus is caused by rickettsiae typhi ( r. mooseri)
Transmitted by xenopsyla cheopis or rat flea
CHLAMYDIAE
Main pathogenitic varieties are
Chlamydiae psittaci
Chlamydiae pneumoniae
trachomatis causes
1.Trachoma which is a chronic keratoconjunctivitis (lab diagnosis by Hp bodies)
2. Inclusion benorrhoea (neonatal form of inclusion conjunctivitis)
3. Pool conjunctivitis
4. Lymphogranuloma venerum
Chlamydia psittaci
Causes psittacosis – consumption of infected poultry products leads to this
disease
VIROLOGY
Interferon – antiviral substances, it is a family of host coded proteins
produced by cells on induction by viral or non viral substances
Pox virus:- small pox- last detected case of small pox – sarban devi , a bengladeshi
woman on 24th may 1975.
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HERPES VIRUS
Herpes simplex virus type I causes oral and cutaneous lesions spreading by
direct contact
Eczema herpeticum
Generalized eruption occurs in children suffering from eczema
Crops of vesicles appear around the ulcer;clinically indistinguishable from vaccinia
virus infections . both designated as Kaposi’s varicella form eruptions.
In chicken pox eruptions are centrifugal in distribution. (small pox rashes are
centripetal in distribution)
In chicken pox patients , secondary bacterial infection due to streptococci or
staphylococci occurs. This is called Reyes syndrome. Clinically characterized by acute
hepatic failure, encephalopathy and hypoglycemia.
Vaccine:- 2 types
a. Salk’s killed polio vaccine
b. Live polio vaccine is oral polio vaccine
Orthomyxovirus causes influenza.
Paramyxovirus Eg. Mumps virus
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FLAVI VIRUS
Causes
1. Japanese encephalitis (vector- culex tritaneorynchus)
2. Yello fever – Vector – Aedes aegypti
3. Dengue fever - Vector - Aedes aegypti
Tick borne encephalitis eg. KFD (Kyansur forest disease)
RHABDO VIRUS
Eg. Rabies virus causes hydrophobia
Diagnosis is confirmed by negri bodies (inclusion bodies) in brain in post mortem
examination mostly in hippocampus and cerebellum
PAPOVA virus include papilloma virus group and polyoma virus group.
The common human disease produced by papova virus is papilloma or wart. (verruca
vulgaris)
A special type of wart is condylom accuminatum or genital wart found on external
genitalia. This may be transmitted venerally and may occasionally turn malignant.
Parvo virus cause erythema infectiosum –‘the fifth disease’ a contagious disease of
children characterized by erythematous rash first appearing on cheeks. – slapped
cheek appearance.
HIV – human immunodeficiency virus – retro virus now called Human T cell
lymphotrophic virus
- RNA virus attacks CD4 cells.
A. Envelops antigens – 1. spicks antigen, 2. transmembrane
B. Shell antigen
C. Core antigen
D. Polymerase antigen
Incubation period varies from 2-6 weeks to 15 years.
Features characaterising AIDS
1. Lymphopenia
2. Selective T cell deficiency – reduction in numbers of T4 (CD4) cells,
inversion of T4: T8 ratio
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3. Decreased delayed hypersensitivityon skin testing
4. Hypergammaglobulinaemia – predominantly IgG and Ig A; also IgM in
children.
5. Polyclonal activation of B cells an dincreased spontaneous spontaneous
secretion Ig.
Common malignancies associated with HIV infection is Kaposi’s sarcoma and
lymphoma- hodgkin’s and Non hodgkin’s types.
HEPATITIS
Hepatitis A – incubation period - 2- 6 weeks
Hepatitis B - I P 4 – 8 weeks
Hepatitis C - IP 2 – 22 weeks
Hepatitis D Ip 4 – 8 weeks
Hepatitis E IP 2 – 9 weeks
Hepatitis B – DNA virus ; all others are RNA virus
Spreads by faeco oral route - hepatitis A and E
Spreads by percutaneous route - Hepatitis B,C and D
Hepatitis B also spread by vertical and sexual route
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b. Councilmann’s bodies - yellow fever, virus B encephalitis
c. Nicolau’s bodies – herpes fibrilis, herpes zoster , polio, Rift valley
fever
FUNGAL INFECTIONS
Superficial mycosis(cutaneous ) or dematophytis
1. Microsporum - attacks skin and hair ; not nail
2. Tricophyton attacks skin , hair and nails. Most important human
parasites are T. rubrum and T. tonsuran
3. Epidermophyton - e.floccosum attacks skin and nails but not hair.
Dermatophytes:
- Tinea capitis – ring worm of scalp
- Tinea circinata – ringworm of glabrous skin
- Tinea barbae - ringworm of beard
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- Tinea pedis – Athletes foot
- Tinea cruris – Dhobi itch or Jock itch
- Tinea unguum - ring worm of nails
Systemic mycosis
Candid albicans – yeast like fungi
Histoplasma capsulatum - Darling’s disease
Cryptococcus neoformans – yeast
Aspergillus - fungus ball
Cocciodes immitis – desert rheumatism
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