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Patra2000 PDF
Patra2000 PDF
Received September 24, 1999, and in revised form November 10, 1999
(SDS) (10), N-cetyltrimethylammonium chloride (11) were from Sigma Chemicals (U.S.A.). Fetal bovine se-
and sarkosyl (sodium N-lauroyl sarcosine; NLS) (12) rum (FBS) and horse serum (HS) were from Gibco-BRL
along with reducing agents like -mercaptoethanol, (U.S.A.). Commercially available recombinant human
dithiothreitol, or cysteine have been extensively used growth hormone was from Boehringer Mannheim
for solubilizing the inclusion body proteins. The soluble (Germany). All other chemicals were of analytical
proteins are then refolded to their native state after the grade. The spectral measurements and analytical
chaotropic agents or other salts are removed by dialyz- HPLC were performed in degassed and filtered buffers
ing the proteins in buffers containing reducing and prepared in Milli-Q water.
oxidizing agents (8,13). Often, additives such as ace-
tone, acetoamide, urea, DMSO, and PEG (14) are used Cloning and Expression of r-hGH
to enhance the yield of folded bioactive protein. Rena-
To clone hGH without any tag and its signal se-
turation of proteins into the native conformation has
quence, the cDNA fragment coding for hGH was ex-
also been reported by using immobilized minichaper-
cised with HinfI-HindIII from pRMhGH (20). This ex-
ones (15) and size-exclusion chromatography (16). De-
cised cDNA fragment was lacking the first 18 bp. The
spite several protocols available for protein solubiliza-
18 bp were chemically synthesized with HinfI over-
tion and refolding, the overall recovery of bioactive
hang at the 3⬘-end and NcoI overhang at the 5⬘-end
proteins from inclusion body is often very low. It is
[5⬘-CATG TTC CCA ACT ATT CCA CTG-3⬘; 3⬘-AAG
expected that the overall yield of purified bioactive
GGT TGA TAA GGT GAC TCA-5⬘].
proteins from the inclusion bodies can be improved if
This synthetic oligonucleotide and HinfI-HindIII-di-
the existing secondary structure of the proteins is pro-
gested cDNA fragments were inserted into NcoI-Hin-
tected during solubilization without the use of high
dIII-digested pQE-60 expression vector (Qiagen,
concentrations of chaotropic agents (17).
U.S.A.). The construct thus obtained has hGH with
Human growth hormone (hGH), a single chain
just one extra methionine at the N-terminus under the
polypeptide containing 191 amino acid residues, apart
control of the phage T5 promoter. The NcoI site origi-
from stimulating cell growth, plays an important role
nally present in pQE-60 was lost during construction of
in a variety of metabolic, physiologic, and anatomic
this plasmid. E. coli M15 cells containing the recombi-
processes (18). The protein folds into a four-helix bun-
nant expression plasmid (pQE 60-hGH) were grown in
dle structure with two disulfide bridges, one connecting
LB or complex medium in the presence of kanamycin
distant parts of the molecule involving amino acid res-
(25 g/ml) and ampicillin (50 g/ml). The cultures were
idues 53 and 165 (large loop) and another between
induced with 1 mM IPTG and were further grown for
residues 182 and 189 (small loop) (19). The large-scale
4 h. Expression of r-hGH in the total cell extracts from
requirement of r-hGH necessitates its high-level ex-
both uninduced and induced cultures was checked by
pression in E. coli as inclusion bodies (20). However,
SDS-PAGE.
expression of the protein along with fusion tag and
subsequent use of high concentrations of chaotropic
reagents for solubilization and purification makes the Fermentation
overall process more complex and expensive as the For large-scale production of r-hGH, recombinant E.
yield of bioactive r-hGH is lowered (21). In this report, coli cells were grown in a 3.5-L fermenter (2-L working
we have described a simple and efficient process for the volume) in complex medium. The composition of the
production of bioactive r-hGH from the inclusion bodies complex medium was as described (22), except that the
of E. coli. The solubilization behavior of r-hGH inclu- initial glucose and yeast extract concentrations were
sion bodies in different buffers was analyzed for an 10 g/L. Fermentation was carried out at 37°C with
understanding of the nature of protein aggregation in vigorous aeration and agitation and the pH of the me-
inclusion bodies. Solubilization of r-hGH from purified dium was maintained at 7 by use of 5 N NaOH. After
inclusion bodies was carried out without disturbing the 3 h of batch growth, the cells were grown in a fed-batch
existing native-like secondary structure and the solu- mode with a continuous supply of glucose and yeast
bilized r-hGH was subsequently purified and refolded extract. Details of the fed-batch fermentation strategy
into the bioactive form. are described elsewhere (23). The culture at OD 600 (op-
tical density) of 40 was induced with 1 mM IPTG,
MATERIALS AND METHODS cultivated for another 4 h, and then harvested. The
harvested cells were checked for expression and pro-
Chemicals cessed for purification of inclusion bodies. Samples
Urea, acrylamide and bis-acrylamide, sodium dode- were collected at regular intervals during the fermen-
cyl sulfate, deoxycholate, and CTAB were of analytical tation to check cell growth, glucose consumption, and
grade, obtained from Amresco (U.S.A.). Sephacryl r-hGH expression. Cell density was determined by
S-200 and DEAE-Sepharose were from Pharmacia Bio- measuring the OD of the culture at 600 nm with a
tech (Sweden). NLS, BSA, prolactin, and RPMI 1640 Kontron (Kontron AG, Switzerland) UV-visible spec-
184 PATRA ET AL.
trophotometer. Higher OD samples were diluted suit- (10:1) were used to soubilize r-hGH from the inclusion
ably to have an absorbance in the range of 0.2– 0.6. Dry bodies. One hundred microliters of purified inclusion
cell weight was determined by centrifuging the sample bodies (8 mg/ml) in 50 mM Tris buffer pH 8.5 was
broth at 4000g for 20 min and drying the washed cell to taken in different microcentrifuge tubes and centri-
constant weight at 105°C. One absorbance unit was fuged. The supernatant was discarded and 1 ml of each
equivalent to 0.35 g L ⫺1 of dry cell weight for uninduced of the above solubilizing buffers was added to the pel-
culture and 0.4 g L ⫺1 dry cell weight for induced cul- lets. The suspension was vortexed and left for 30 min
ture. Residual glucose in the fermentation broth was at room temperature and the turbidity of the solution
measured by a glucose kit (Sigma), and the acetic acid was measured at 450 nm. The samples were again
concentration was monitored by an acetic acid kit centrifuged at 12000 rpm for 10 min. The supernatant
(Boehringer Mannheim). after filtering through a 0.45-m Millipore filter was
measured at 280 nm for an estimation of protein con-
Isolation, Purification, and Estimation of r-hGH from tent. The same protocol was followed to measure the
Inclusion Bodies effect of pH and urea on inclusion body solubilization.
To dissociate the r-hGH oligomers present in inclu-
Induced E. coli cells sampled at different time points
sion bodies into monomers, different concentrations of
during fed-batch fermentation were centrifuged at
-mercaptoethanol (2 to 20 mM) in 100 mM Tris buffer
4000g for 30 min and the cell pellet was dissolved in 50
at pH 12.5 containing 2 M urea were used. Solubiliza-
mM Tris-HCl buffer (pH 8.0) containing 5 mM EDTA
tion of inclusion bodies in 8 M urea with different
and 1 mM PMSF. Cells were lysed by sonication and
concentrations of -mercaptoethanol (100 –200 mM)
centrifuged at 8000g for 30 min to isolate r-hGH inclu-
was also tried to dissociate the oligomers into the
sion bodies. For large-scale isolation and purification of
monomeric form during solubilization. The extent of
r-hGH, induced E. coli cells were lysed by a French
solubilization in these buffers was determined as de-
press at 18000 psi and the inclusion bodies were recov-
scribed above.
ered by centrifugation at 8000g. The inclusion body
pellets thus obtained were washed with 50 mM Tris-
HCl buffer (pH 8.0) containing 5 mM EDTA and 2% Purification of r-hGH
deoxycholate (17). Finally, the inclusion bodies were
For large-scale purification of r-hGH, pure inclusion
washed with distilled water to remove contaminating
bodies were isolated (⬃104 mg protein isolated from 65
salt and detergent and centrifuged at 8000g for 30 min
ml of high cell density fermentation broth) and solubi-
and the pellet was used for estimation of r-hGH. At this
lized in 16 ml of 100 mM Tris buffer, pH 12.5, contain-
stage, inclusion bodies contained mostly r-hGH
ing 2 M urea. The solubilized r-hGH was diluted five
(⬎90%), the majority in the form of monomer around
times with Milli-Q water and the pH was brought down
21 kDa in SDS-PAGE along with some high molecular
to 8.5 by adding 1 N HCl. A DEAE-Sepharose ion-
aggregates. The inclusion bodies were completely sol-
exchange column (5 ⫻ 5 cm) equilibrated with 20 mM
uble in 50 mM Tris-HCl buffer (pH 8.5) containing 1%
Tris buffer containing 5 mM EDTA, 0.4 M urea, and
SDS and the solubilized r-hGH samples were diluted
0.02% sodium azide, pH 8.5, was used for the purifica-
appropriately and estimated using BCA protein assay.
tion of r-hGH. The solution was loaded to an ion-ex-
SDS-PAGE was carried out using the method de-
change column at a flow rate of 0.5 ml/min. The column
scribed by Laemmli (24).
was washed with 5 column volumes of equilibration
buffer followed by 3 column volumes of equilibration
Solubilization of r-hGH from Inclusion Bodies buffer containing 0.1 M NaCl. Recombinant hGH was
Buffers of different pH, denaturants, combination of eluted with a gradient of 0.1– 0.25 M NaCl in the equil-
denaturant and salt, and ionic detergent as well as ibration buffer at a flow rate of 1.5 ml/min. The absor-
oxidizing and reducing agents were used to solubilize bance was measured on line with a Pharmacia UV
the r-hGH inclusion bodies. Purified r-hGH inclusion monitor. Peak fractions showing r-hGH were pooled,
bodies were solubilized in 100 mM Tris buffer at dif- checked in SDS-PAGE, and lyophilized. The lyophi-
ferent pH (3–13) both in the presence and in the ab- lized r-hGH solubilized in 5 ml of 20 mM Tris buffer
sence of urea. Other solubilizing buffers such as 2 M containing 5 mM EDTA, 0.02% (w/v) sodium azide, and
Tris buffer at pH 12, 2 M Tris buffer at pH 12 contain- 1 mM PMSF was loaded onto a Sephacryl S-200 col-
ing 2 M Urea, 2 M Tris buffer at pH 12 with reduced: umn (bed volume ⫽ 90 ⫻ 1.6 cm, flow rate of 20 ml/h)
oxidized glutathione (5:1 and 10:1 mM), 1% N-lauroyl for further purification. The fractions which showed a
sarcosine in Tris buffer at pH 8.5, 1% N-cetyltrimeth- single r-hGH protein band on SDS-PAGE were pooled
ylammonium bromide in 50 mM Tris at pH 8.5, 8 M together, dialyzed against 20 mM Tris buffer at pH 8.5,
urea, 6 M guanidine hydrochloride, 1% SDS in 50 mM and lyophilized. Lyophilized r-hGH was used for phys-
Tris at pH 8.5, and 100 mM Tris buffer at pH 12.5 with icochemical and bioactivity assays and were stored at
2 M urea along with reduced:oxidized glutathione ⫺20°C for further use. HPLC analysis of the pure
RECOMBINANT HUMAN GROWTH HORMONE 185
Spectroscopic Analysis
A circular dichroism spectrum was obtained at 25°C
in the wavelength range of 190 –250 nm using a
JASCO-Spectropolarimeter in 20 mM Tris buffer. The
sample was scanned 10 times for data accumulation
and the average spectrum was plotted. Similarly, the
UV spectrum of r-hGH was scanned within the wave-
length range 240 to 350 nm (Contron UV-Vis spectro-
photometer). Fluorescence emission spectrum was
taken by exciting the protein molecules at 280 nm and
measuring the emission in the wavelength region from
320 to 350 nm using a Schimadzu spectrofluoropho-
tometer (Model 1501).
FIG. 5. (A) Final purification of r-hGH through gel-filtration chromatography. Lyophilized powder of r-hGH was solubilized in 5 ml of buffer
and loaded onto a gel-filtration column. Fractions of 3.5 ml were collected and the peaks were pooled separately. The majority of the r-hGH
eluted as a monomeric form between Fractions 30 and 40. (B) Monomeric pure r-hGH analyzed on a Shodex Protein KW-804 HPLC column
at 280 nm showing a single peak. (C) SDS-PAGE analysis of purified r-hGH eluted from S-200 gel-filtration column. Lane 1, pure r-hGH.
Lane 2, molecular weight markers.
spectroscopic analysis. UV spectrum of the purified the native hGH which gave a peak at 340 nm (Fig.
r-hGH showed an absorbance maxima at 276.8 nm, 6B).The molar extinction coefficient of pure r-hGH was
and a shoulder at 283 nm, which was comparable to found to be 18,800 M ⫺1 cm ⫺1 which is very close to the
that of native human growth hormone reported by reported value of 18,890 M ⫺1 cm ⫺1 for native hGH (26).
Bewley and Li, in 1984 (29) (Fig. 6A). The fluorescence Growth kinetics of the prolactin-dependent Nb2 lym-
spectrum of refolded r-hGH was found to be identical to phoma cell line was monitored to evaluate the bioac-
RECOMBINANT HUMAN GROWTH HORMONE 189
TABLE 1
Purification of r-hGH from High Cell Density Culture a
tivity of purified r-hGH. The addition of prolactin, com- ing of the native protein (28). However, for human
mercial hGH, and r-hGH promoted growth of Nb2 cells growth hormone, there did not seem to be any indica-
arrested at G 0/G 1 phases by serum deprivation. tions of general unfolding of the secondary structure
Growth of Nb2 cells in the presence of different con- (29,30) and the pH-induced unfolding has been re-
centrations of r-hGH was found to be comparable to ported to be reversible for a similar protein [bovine
that observed for the commercial hGH (Fig. 7). No growth hormone (31)]. Use of 2 M urea at alkaline pH
growth stimulation was observed in the presence of improved r-hGH solubilization from inclusion bodies
BSA which was used as a negative control. without disturbing the existing native-like secondary
structure of the proteins. Although diminishing hydro-
DISCUSSION phobic interaction between water and protein molecule
is a linear function of urea concentration (32), this
Fed-batch fermentation of E. coli resulted in high
effect also existed substantially at as low as 2 M urea
volumetric yield of r-hGH. In 10 h of fed-batch fermen-
concentration. Since proteins could not be denatured at
tation, 1.6 g/L of r-hGH was produced in comparison to
30 – 40 mg/L expressed in shaker flask culture. The such a low concentration of urea, urea was probably
r-hGH accumulated as inclusion bodies in E. coli and only serving the purpose of physical separation of the
was isolated to more than 90% purity by extensive molecules by disrupting the hydrophobic interactions.
washing in 2% deoxycholate in 50 mM Tris buffer, pH Thus in conclusion, r-hGH was solubilized from the
8.5. However, among the last 5–10%, the dimers and inclusion bodies without its existing native-like sec-
oligomers of r-hGH were the major contaminants. The ondary structure being disturbed. The extent of solu-
purity and homogeneity of the r-hGH inclusion body bilization in 100 mM Tris buffer, pH 12.5, containing 2
preparation were in agreement with the proposed com- M urea was found to be comparable with that of 8 M
position of the inclusion bodies that they are formed urea and a maximum amount of 6.5 mg/ml of r-hGH
due to specific aggregation of single protein intermedi- could be solubilized from the inclusion bodies. In-
ates (4,7). As the inclusion bodies consisted of mostly creased solubility of r-hGH in the above buffer could be
r-hGH, solubilization and refolding were carried out an effect of both urea and pH, indicating the existence
before further purification. both ionic and hydrophobic interactions in the inclu-
Inclusion body proteins have been reported to have sion bodies.
extensive native-like secondary structure (5,27) and Expression of r-hGH in E. coli as inclusion bodies
thus when solubilized while retaining the native-like was always associated with the formation of dimers
secondary structure results in high recovery of the and oligomers which were also observed at the early
bioactive protein (17). In order to protect the native- stage of protein synthesis. Bacterial cytosol being very
like secondary structure, r-hGH inclusion bodies were reducing in nature does not allow formation of disulfide
solubilized at alkaline pH, containing mild concentra- bonds, so the aggregates could not be due to intermo-
tions of chaotropic agents (2 M urea). Charge distribu- lecular disulfide bonds. Possibilities of mixed disulfide
tion provided by high alkaline pH along the protein bond formation leading to high molecular weight ag-
chain was responsible for higher solubilization of gregates may occur during cell lysis. However as the
r-hGH from inclusion bodies. This suggested that pH r-hGH oligomers could not be dissociated in to mono-
has a crucial role in destabilizing the inclusion body mers in the presence of strong reducing agent such as
aggregation. Changing the charge distribution along -mercaptoethanol or reduced:oxidized glutathione, it
the protein molecule by changing the pH generally can be concluded that non-disulfide covalent bonding is
affects the protein stability and may lead to an unfold- responsible for oligomer formation in r-hGH inclusion
190 PATRA ET AL.
prone to intermolecular aggregation during refolding. 2. Mitraki, A., and King, J. (1989) Protein folding intermediates
Hence these buffers, despite their high solubilization and inclusion body formation. Bio/Technology 7, 690 – 697.
power, lower the overall recovery of the native folded 3. Schein, C. H. (1989) Production of soluble recombinant proteins
in bacteria. Bio/Technology 7, 1141–1149.
proteins and thus were avoided for the solubilization of
4. Mitraki, A., Hass-Petingell, C., and King, J. (1991) Mechanism of
r-hGH.
inclusion body formation in “Protein Refolding” (Georgiou, G.,
Enhanced solubilization of the r-hGH from the inclu- and De Bernardez-Clark, E., Eds.), ACS Symposium Series No.
sion bodies in all these above-mentioned buffers indi- 470, pp. 35– 49, Am. Chem. Soc., Washington, DC.
cated that hydrophobic interaction is probably the 5. Przybycien, T. M., Dunn, J. P., Valax, P., and Georgiou, G. (1994)
most dominant force for aggregation of proteins during Secondary structure characterization of -lactamase inclusion
high-level expression. However, the presence of ionic bodies. Protein Eng. 7, 131–136.
and/or covalent interactions in the formation and sta- 6. Bowden, G. A., Paredes, A. M., and Georgiou, G. (1991) Structure
bilization of inclusion bodies cannot be ruled out. The and morphology of protein inclusion bodies in E. coli. Bio/Tech-
nology 9, 725–730.
r-hGH inclusion bodies were devoid of disulfide bond
aggregates. This was supported by the ineffectiveness 7. Speed, M. A., Wang, D. I. C., and King, J. (1996) Specific aggre-
gation of partially folded polypeptide chains: The molecular basis
of -mercaptoethanol and reduced/oxidized glutathi- of inclusion body composition. Nature Biotechnol. 14, 1283–1287.
one in dissociating the r-hGH multimers to the mono- 8. Fischer, B., Sumner, I., and Goodenough, P. (1993) Isolation,
meric form. renaturation and formation of disulfide bonds of eukaryotic pro-
As the extent of aggregation of partially denatured teins expressed in Escherichia coli as inclusion bodies. Biotech-
solubilized r-hGH was low during buffer exchange, pu- nol. Bioeng. 41, 3–13.
rification and refolding of the r-hGH were carried out 9. Rudolph, R., and Lilie, H. (1996) In vitro folding of inclusion body
at high initial protein concentrations. Solubilized proteins. FASEB J. 10, 49 –56.
r-hGH was purified and refolded using ion-exchange 10. Stockel, J., Doring, K., Malotka, J., Jahnig, F., and Dornmair, K.
and gel-filtration chromatography. Solubilization of (1997) Pathway of detergent mediated and peptide-ligand medi-
ated refolding of heterodimeric class II major histocompatibility
the r-hGH from inclusion bodies while retaining the complex (MHC) molecules. Eur. J. Biochem. 248, 684 – 691.
native-like secondary structures helped in lowering the
11. Cardamone, M., Puri, N. K., and Brandon, M. R. (1995) Compar-
extent of protein aggregation during buffer exchange ing the refolding and reoxidation of recombinant porcine growth
and dilution. Despite the presence of two disulfide hormone from a urea denatured state and from Escherichia coli
bonds, extensive protein aggregation during refolding inclusion bodies. Biochemistry 34, 5773–5794.
due to incorrect disulfide bond formation was not ob- 12. Burgess, R. R. (1996) Purification of overproduced E. coli RNA
served for r-hGH. This may be due to exposure to polymerase factor by solubilizing inclusion bodies and refold-
sufficient air oxidation during the process of purifica- ing from sarkosyl. Methods Enzymol. 273, 145–149.
tion, indicating that air oxidation has a profound effect 13. Rudolph, R., Bohm, G., Lilie, H., and Jaenick, R. (1997) Folding
proteins in “Protein Function, A practical approach” (Creighton,
on the rearrangement of the disulfide bonds while pro-
T. E., Ed.), pp. 57–99, IRL Press at Oxford Univ. Press, New
tein was folding from a metastable state having exten- York.
sive secondary structures to the folded native state. 14. Yasuda, M., Murakami, Y., Sowa, A., Ogino, H., and Ishikawa,
The overall yield of the r-hGH from the inclusion bod- H. (1998) Effect of additives on refolding of denatured protein.
ies was ⬃50% in comparison to 20 to 25% achieved in Biotechnol. Prog. 14, 601– 606.
solubilizing the inclusion bodies in high concentrations 15. Altamirano, M. M., Golbik, R., Zahn, R., Buckle, A. M., and
of chaotropic reagents. Recombinant human growth Fersht, A. R. (1997) Refolding chromatography with immobilized
hormone showed efficient growth-promoting activity in mini-chaperone. Proc. Natl. Acad. Sci. USA 94, 3576 –3578.
Nb2 cell proliferation assays, indicating that the puri- 16. Batas, B., and Chaudhuri, J. B. (1996) Protein refolding at high
concentration using size-exclusion chromatography. Biotechnol.
fied and refolded r-hGH has a biologically active con-
Bioeng. 50, 16 –23.
formation. Such solubilization and purification proto-
17. Khan, R. H., AppaRao, K. B. C., Eshwari, A. N. S., Totey, S. M.,
cols described in this communication could be applied and Panda, A. K. (1998) Solubilization of recombinant ovine
for maximizing the recovery of therapeutically impor- growth hormone with retention of native like secondary struc-
tant proteins expressed as inclusion bodies in E.coli. ture and its refolding from the inclusion bodies of E. coli. Bio-
technol. Prog. 14, 722–728.
ACKNOWLEDGMENTS 18. Isaksson, O. G., Eden, S., and Jansson, J. O. (1985) Mode of
action of pituitary growth hormone on target cells. Annu. Rev.
This work is supported by the core grant from National Institute of Physiol. 47, 483– 499.
Immunology (NII), New Delhi, received from the Department of
19. Chawla, R. K., Parks, J. S., and Rudman, D. (1983) Structural
Biotechnology, Government of India. The authors are grateful to Dr.
variants of human growth hormone: Biochemical, genetic, and
S. K. Basu, Director, NII, for his support and encouragement.
clinical aspects. Annu. Rev. Med. 34, 519 –547.
20. Mukhija, R., Rupa, P., Pillai, D., and Garg, L. C. (1995) High-
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