Understanding of biochemical activities of microorganisms is the basis for design
and selection of biological treatment process Carbon, energy and some inorganic elements are required for the synthesis of new cellular materials, reproduction and proper functions of microorganisms Carbon and energy sources are referred to as Substrates Carbon Sources: Obtain carbon for cell growth from Organic matter or Carbon dioxide. Heterotrophs: Organisms that use organic carbon for the formation of new biomass. Autotrophs: Organisms that derive cell carbon from carbon dioxide. Energy Sources: Energy needed for cell synthesis is supplied light of chemical oxidation reaction. Phototrophs: Organisms that use light as energy source. Chemotrophs: organisms that derive energy from chemical reaction. Microbial metabolism Energy producing chemical reaction by chemotrophs are oxidation- reduction reactions. Electrons are transferred from an electron donor to an electron acceptor. Electron donor is oxidized and the electron acceptor is reduced Electron donors and acceptors can be either organic or inorganic compounds The electron acceptor may be available within the cell during metabolism (endogenous) or obtained from outside the cell (exogenous). Aerobic: the reaction where oxygen is used for the electron acceptor Anaerobic: the reaction where other electron acceptors other than oxygen are involved. Anoxic: reaction where nitrite or nitrate are used for electron acceptors under anaerobic conditions