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*Chromatography is used to separate mixtures of substances into their components. ... They all
have a stationary phase (a solid, or a liquid supported on a solid) and a mobile phase (a liquid or a
gas).
*What is it?
Some materials appear homogenous, but are actually a combination of substances. For example, green
plants contain a mixture of different pigments. In addition, the black ink in the pens that are used in
this experiment is a mixture of different colored materials. In many instances, we can separate these
materials by dissolving them in an appropriate liquid and allowing them to move through an
absorbent matrix, like paper. organic and inorganic compounds so that they can be analyzed and
studied. By analyzing a compound, a scientist can figure out what makes up that compound.
Chromatography is a great physical method for observing mixtures and solvents. The word
chromatography means "color writing" which is a way that a chemist can test liquid mixtures. While
studying the coloring materials in plant life, a Russian botanist invented chromatography in 1903. His
name was M.S. Tswett. Chromatography is such an important technique that two nobel prizes have
been awarded to chromatographers. Over 60% of chemical analysis worldwide is currently done with
chromatography or a variation thereon. Chromatography is used in many different ways. Some people
use chromatography to find out what is in a solid or a liquid. It is also used to determine what
unknown substances are. The Police, used to determine what unknown substances are. The Police,
solve a crime. It is also used to determine the presence of cocaine in urine, alcohol in blood, PCB's in
In all chromatography there is a mobile phase and a stationary phase. The stationary phase is the
phase that doesn't move and the mobile phase is the phase that does move. The mobile phase moves
through the stationary phase picking up the compounds to be tested. As the mobile phase continues to
travel through the stationary phase it takes the compounds with it. At different points in the stationary
phase the different components of the compound are going to be absorbed and are going to stop
moving with the mobile phase. This is how the results of any chromatography are gotten, from the
point at which the different components of the compound stop moving and separate from the other
components. In paper and thin-layer chromatography the mobile phase is the solvent. The stationary
phase in paper chromatography is the strip or piece of paper that is placed in the solvent. In thin-
layer chromatography the stationary phase is the thin-layer cell. Both these kinds of chromatography
use capillary action to move the solvent through the stationary phase.
The retention factor, Rf is a quantitative indication of how far a particular compound travels in a
particular solvent. In order to make the technique more scientific rather than a mere interpretation by
sight, what is called the Retention Value (Rf value for short) was applied in chromatography. A
particular compound will travel the same distance along the stationary phase by a specific solvent (or
solvent mixture) given that other experimental conditions are kept constant. In other words, every
compound (dye, pigment, organic substance etc) have a specific Rf value for every specific solvent
and solvent concentration. Rf values come very handy for identification because one can compare Rf
values of the unknown sample (or its consituents) with Rf Values of known compounds.
There are different kinds of chromatographic techniques and these are classified according to the
shape of bed, physical state of mobile phase, separation mechanisms.
Apart from these there are certain modified forms of these chromatographic techniques involving
different mechanisms and are hence categorized as modified or specialized chromatographic
techniques.
When the mobile phase along with the mixture that needs to be separated is introduced from the top
of the column, the movement of the individual components of the mixture is at different rates. The
components with lower adsorption and affinity to stationary phase travel faster when compared to
the greater adsorption and affinity with the stationary phase. The components that move fast are
removed first whereas the components that move slow are eluted out last.
The adsorption of solute molecules to the column occurs in a reversible manner. The rate of the
movement of the components is expressed as:
Before starting with the Column Chromatography Experiment let us understand the different phases
involved.
Mobile phase – This phase is made up of solvents and it performs the following functions:
Stationary phase – It is a solid material which should have good adsorption property and
meet the conditions given below:
1. Shape and size of particle: Particles should have uniform shape and size in the range of 60 – 200μ
in diameter.
The stationary phase is made wet with the help of solvent as the upper level of the mobile phase and
the stationary phase should match. The mobile phase or eluent is either solvent or mixture of solvents.
In the first step the compound mixture that needs to be separated, is added from the top of the column
without disturbing the top level. The tap is turned on and the adsorption process on the surface of
silica begins.
Without disturbing the stationary phase solvent mixture is added slowly by touching the sides of the
glass column. The solvent is added throughout the experiment as per the requirement.
The tap is turned on to initiate the movement of compounds in the mixture. The movement is based
on the polarity of molecules in the sample. The non-polar components move at a greater speed when
compared to the polar components.
For example, a compound mixture consists of three different compounds viz red, blue, green then
their order based on polarity will be as follows blue>red>green
As the +
of the green compound is less, it will move first. When it arrives at the end of the column it is collected
in a clean test tube. After this, the red compound is collected and at last blue compound is collected. All
these are collected in separate test tubes.
Chromatography technique that uses paper sheets or strips as the adsorbent being the stationary
phase through which a solution is made to pass is called paper chromatography. It is an inexpensive
method of separating dissolved chemical substances by their different migration rates across the
sheets of paper. It is a powerful analytical tool that uses very small quantities of material. Paper
chromatography was discovered by Synge and Martin in the year 1943.
1. Selecting a suitable type of development: It is decided based on the complexity of the solvent,
paper, mixture, etc. Usually ascending type or radial paper chromatography is used as they are easy to
perform. Also, it is easy to handle, the chromatogram obtained is faster and the process is less time-
consuming.
2. Selecting a suitable filter paper: Selection of filter paper is done based on the size of the pores,
and the sample quality.
Dr.Shri R.M.S Institute of Sci & Tech ,COP,Bhanpura Page 8
3. Prepare the sample: Sample preparation includes the dissolution of the sample in a suitable
solvent (inert with the sample under analysis) used in making the mobile phase.
4. Spot the sample on the paper: Samples should be spotted at a proper position on the paper by
using a capillary tube.
5. Chromatogram development: Chromatogram development is spotted by immersing the paper in
the mobile phase. Due to the capillary action of paper, the mobile phase moves over the sample on the
paper.
6. Paper drying and compound detection: Once the chromatogram is developed, the paper is dried
using an air drier. Also, detecting solution can be sprayed on the chromatogram developed paper and
dried to identify the sample chromatogram spots.
To inspect cosmetics.
1. Ascending Paper Chromatography – The techniques goes with its name as the solvent moves in an
upward direction.
2. Descending Paper Chromatography – The movement of the flow of solvent due to gravitational pull
and capillary action is downwards hence the name descending paper chromatography.
Thin Layer Chromatography is a technique used to isolate non-volatile mixtures. The experiment is
conducted on a sheet of aluminium foil, plastic, or glass which is coated with a thin layer of adsorbent
material. The material usually used is aluminium oxide, cellulose, or silica gel.
1. Thin Layer Chromatography Plates – ready-made plates are used which are chemically inert and
stable. The stationary phase is applied on its surface in the form of a thin layer. The stationary phase on
the plate has a fine particle size and also has a uniform thickness.
To apply sample spots, thin marks are made at the bottom of the plate with the help of a pencil.
Pour the mobile phase into the TLC chamber and to maintain equal humidity, place a moistened filter paper
in the mobile phase.
Place the plate in the TLC chamber and close it with a lid. It is kept in such a way that the sample faces the
mobile phase.
Immerse the plate for development. Remember to keep the sample spots well above the level of the mobile
phase. Do not immerse it in the solvent.
Wait till the development of spots. Once the spots are developed, take out the plates and dry them. The
sample spots can be observed under a UV light chamber.
The qualitative testing of Various medicines such as sedatives, local anaesthetics, anticonvulsant
tranquilisers, analgesics, antihistamines, steroids, hypnotics is done by TLC.
Thin layer chromatography can be used to identify natural products like essential oils or volatile oil, fixed
oil, glycosides, waxes, alkaloids, etc
It is used to purify of any sample and direct comparison is done between the sample and the authentic
sample
It is used in the food industry, to separate and identify colours, sweetening agent, and preservatives
Columns:
Two types of columns are used in GC:
1. Packed columns are 1.5-10 m in length and have an internal diameter of 2-4 mm. The tubing is usually
made of stainless steel or glass and contains a packing of finely divided, inert, solid support material (e.g.,
diatomaceous earth) that is coated with a liquid or solid stationary phase. The nature of the coating material
determines what type of materials will be most strongly adsorbed. Thus numerous columns are available
that are designed to separate specific types of compounds.
2. Capillary columns have a very small internal diameter, on the order of a few tenths of millimeters, and
lengths between 25-60 meters are common. The inner column walls are coated with the active materials
(WCOT columns), some columns are quasi-solid filled with many parallel microspores (PLOT columns).
Most capillary columns are made of fused-silica with a polyimide outer coating. These columns are
flexible, so a very long column can be wound into a small coil.
Among these new developments are:
(i) Internally heated micro FAST columns, where two columns, an internal heating wire and a temperature
sensor are combined within a common column sheath (micro FAST);
Detectors:
A number of detectors are used in gas chromatography. The most common are the flame ionization
detector (FID) and the thermal conductivity detector (TCD). Both are sensitive to a wide range of
components, and both work over a wide range of concentrations.
They include:
i. Discharge ionization detector (DID)
ii. Electron capture detector (ECD)
iii. Flame photometric detector (FPD)
iv. Hall electrolytic conductivity detector (E1CD)
v. Helium ionization detector (HID)
vi. Nitrogen phosphorus detector (NPD)
vii. Mass selective detector (MSD)
viii. Photo-ionization detector (PID)
ix. Pulsed discharge ionization detector (PDD)
Some gas chromatographs are connected to a mass spectrometer which acts as the detector. The
combination is known as GC-MS. Some GC-MS are connected to an Nuclear Magnetic Resonance
Spectrometer which acts as a back-up detector. This combination is known as GC-MS- NMR. Some GC-
MS-NMR are connected to an infrared spectra which acts as a back-up detector. This combination is
known as GC-MS-NMR-IR. It must, however, be stressed that this is very rare as most analysis needed can
be concluded via purely GC-MS.
Methods:
The method is the collection of conditions in which the GC operates for a given analysis. Method
development is the process of determining what conditions are adequate and/or ideal for the analysis
required. Conditions which can be varied to accommodate a required analysis include inlet temperature,
detector temperature, column temperature and temperature program, carrier gas and carrier gas flow rates,
the column’s stationary phase, diameter and length, inlet type and flow rates, sample size and injection
technique.
Types of HPLC:
(1.)Normal phase chromatography:
Reversed-phase high performance liquid chromatography (RP-HPLC) has become a powerful tool for the
analysis of peptides and proteins for the following reasons:
SEC is a widely used technique for the purification and analysis of synthetic and biological polymers,
such as proteins, polysaccharides and nucleic acids. Biologists and biochemists typically use a gel
medium—usually polyacrylamide, dextran or agarose—and filter under low pressure. Polymer chemists
typically use either a silica or cross-linked polystyrene medium under a higher pressure. These media are
known as the stationary phase.
Dr.Shri R.M.S Institute of Sci & Tech ,COP,Bhanpura Page 24
The advantage of this method is that the various solutions can be applied without interfering with the
filtration process, while preserving the biological activity of the particles to be separated. The technique
is generally combined with others that further separate molecules by other characteristics, such as
acidity, basicity, charge, and affinity for certain compounds.
The underlying principle of SEC is that particles of different sizes will elute (filter) through a stationary
phase at different rates. This result in the separation of a solution of particles based on size, provided
that all the particles are loaded simultaneously or near simultaneously, particles of the same size should
elute together.
Applications:
1. Proteomics :
SEC can also assay protein tertiary structure as it measures the hydrodynamic volume (not molecular
weight), allowing folded and unfolded versions of the same protein to be distinguished. For example,
the apparent hydrodynamic radius of a typical protein domain might be 14a and 36A for the folded
and unfolded forms respectively.
SEC allows the separation of these two forms as the folded form will elute much later due to its
smaller size. Alternatively, folded and unfolded versions of the same metalloproteinase can be
separated according to their different isoelectric points by using quantitative preparative native
continuous polyacrylamide gel electrophoresis (QPNC-PAGE).
2. Polymer synthesis:
SEC can be used as a measure of both the size and the polydispersity of a synthesised polymer; that one
is able to find distribution of sizes of polymer molecules. If standards of a known size are run
previously, then a calibration curve can be created to determine the sizes of polymer molecules of
interest.
Alternatively, techniques such as light scattering and/or viscometry can be used online with SEC to
yield absolute molecular weights that do not rely on calibration with standards of known molecular
weight. Due to the difference in size of two polymers with identical molecular weights, the absolute
determination methods are generally more desirable. A typical SEC system can quickly (in about half an
hour) give polymer chemists information on the size and polydispersity of the sample.
This type of chromatography is further subdivided into cation exchange chromatography and
anion exchange chromatography:
i. Cation exchange chromatography retains positively charged cations because the stationary phase
displays a negatively charged functional group such as a phosphoric acid.
ii. Anion exchange chromatography retains negatively charged anions using positively charged functional
group such as a quaternary ammonium cation.
Proteins have numerous functional groups that can have both positive and negative charges. Ion exchange
chromatography separates proteins according to their net charge, which is dependent on the composition
of the mobile phase. By adjusting the pH or the ionic concentration of the mobile phase, various protein
molecules can be separated.
For example, if a protein has a net positive charge at pH 7, then it will bind to a column of negatively-
charged beads, whereas a negatively charged protein would not. By changing the pH so that the net
charge on the protein is negative, it too will be eluted.
Elution by changing the ionic strength of the mobile phase is a more subtle effect — it works as ion from
the mobile phase and will interact with the immobilized ion in preference over those on the stationary
phase.
This “shields” the stationary phase from the protein (and vice versa) and allows the protein to elute.
A sample is introduced, either manually or with an auto sampler, into a sample loop of known volume.
A buffered aqueous solution known as the mobile phase carries the sample from the loop onto a column
that contains some form of stationary phase material. This is typically a resin or gel matrix consisting of
agarose or cellulose beads with covalently bonded charged functional groups.
The target analytes (anions or cations) are retained on the stationary phase but can be eluted by
increasing the concentration of a similarly charged species that will displace the analyte ions from the
stationary phase. For example, in cation exchange chromatography, the positively charged analyte could
be displaced by the addition of positively charged sodium ions.
The analytes of interest must then be detected by some means, typically by conductivity or UV/Visible
light absorbance. In order to control an IC system, a Chromatography Data System (CDS) is usually
needed. In addition to IC systems, some of these CDSs can also control Gas Chromatography (GC) and
HPLC systems.
Parameters:
There are different parameters upon which the separation by HPLC relies.
Some of the important parameters are discussed below:
1. Internal diameter:
The internal diameter (ID) of an HPLC column is a critical aspect that determines quantity of analyte
that can be loaded onto the column and also influences sensitivity. Larger columns are usually seen in
industrial applications such as the purification of a drug product for later use. Low ID columns have
improved sensitivity and lower solvent consumption at the expense of loading capacity.
i. Larger ID columns (over 10 mm) are used to purify usable amounts of material because of their large
loading capacity.
ADVANTAGES of HPLC :
Speed.
High Resolution .
Accuracy.
Automation.
Higher resolution and speed of analysis.
DISADVANTAGES of HPLC :
Cost.
Complexity.
Application:
SFC is used in industry primarily for separation of chiral molecules, and uses the same columns as standard
HPLC systems. SFC is now commonly used for achiral separations and purifications in
the pharmaceutical industry.[3]
iii. Discern what biological compounds bind to a particular molecule, such as drugs.
Application:
The purpose of employing this technique is to separate mixtures that one dimensional liquid
chromatography otherwise cannot separate effectively. Two dimensional liquid chromatography is better
suited to analyzing complex mixtures samples such as urine, environmental substances and forensic
evidence such as blood.
12. "Rapid Chromatographic Techniques for Preparative Separation with Moderate Resolution." Still, W. C.;
Kahn, M.; Mitra, A. J. Org. Chem. 1978, 43 (14), 2923-5.
13. "Preparative Reversed-Phase Flash Chromatography, a Convenient Method for the Workup of Reaction
Mixtures." Kuhler, T. C.; Lindsten, G. R. J. Org. Chem. 1983, 48 (20), 3589-3591.
14. "Reverse Phase Flash Chromatography: A Convenient Method for the Large Scale Separation of Polar
Compounds." O'Neil, I. A. Synlet 1991, 661-662.
15. "Ion Exchange Chromatography, Principles and Methods." by Pharmacia, Laboratory Separation Division.