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Abstract: Two prototype heme models, plexes are also provided. A cis confor- Structure-energy ± spin relations associ-
protoporphyrin-IX [Fe(PPIX)] and mation of the vinyl groups of [Fe- ated with Fe-O-O bending in [Fe-
picket fence [Fe(TpivPP)(2-meIm)], are (PPIX)] is favored by 3 kcal molÿ1. Elec- (TpivPP)(2-meIm)(O2)] are analyzed.
analyzed by density functional theory tronic and structural properties of the Different orientations of the FeÿO2
(DFT) combined with molecular dy- central iron porphyrin are not affected bond obtained from the X-ray structure
namics within the Car ± Parrinello either by the presence of the porphyrin are found to have the same energy. In
scheme (CPMD). The fully optimized substituents or by the vinyl conforma- contrast to protoheme, the picket-fence
structures agree with experiments, help tion. Also no change is found with environment stabilizes the binding of O2
to clarify the structure of the FeÿXY respect to O2 , CO, and NO binding. and CO dramatically, due to electro-
bonds (XY O2 , CO), and reveal new static interactions of the ligand with the
features like the small displacements of polar-binding pocket. The likely influ-
Keywords: carbonyl complexes ´
the TpivP substituents to accommodate ence of a solvation shell on the energetic
density functional theory ´ dioxygen
the bent FeO2 unit (aFeÿOÿO 1218). properties is discussed.
complexes ´ heme models ´ molec-
Structural predictions for [FeTpivPP-
ular dynamics
(2-meIm)CO] and [Fe(PPIX)] com-
250 WILEY-VCH Verlag GmbH, D-69451 Weinheim, 1999 0947-6539/99/0501-0250 $ 17.50+.50/0 Chem. Eur. J. 1999, 5, No. 1
250 ± 262
Chem. Eur. J. 1999, 5, No. 1 WILEY-VCH Verlag GmbH, D-69451 Weinheim, 1999 0947-6539/99/0501-0251 $ 17.50+.50/0 251
FULL PAPER M. Parrinello and C. Rovira
work. However, we have verified in selected cases that the use ofthe BLYP In order to explore conformational flexibility of the vinyl
functional[21d] leads to very similar results. The relevance of the gradient substituents, additional optimization was performed with one
corrections (GC) for a quantitative understanding of the Fe ± ligand-
bonding properties (i.e., structure and energy) is given in reference [20f].
vinyl group with the C7C8 double bond rotated 1808 with
Only valence electrons were explicitly included in our computation, and respect to the C3ÿC7 bond (trans conformation, as depicted in
their interaction with the ionic cores was described by norm-conserving, ab Scheme 1). The triplet state [3Fe(PPIX)] turns out to have the
initio pseudopotentials generated by means of the scheme developed by
Troullier and Martins.[21e] The angular nonlocality was taken into account
by the Kleinman ± Bylander construction.[21f] The pseudopotential for Fe
was supplemented by nonlinear core corrections to enhance the trans-
ferability with respect to magnetic excitations.[21g] A previous work on iron
porphyrin systems[19] showed that this scheme gives accurate results when
compared with all electron DFT calculations. The molecules under study
were enclosed in an orthorhombic box periodically repeated in space (box
sizes: a 14 , b 16 , and c 12 for the PPIX complexes, a c Scheme 1. Vinyl isomerism in [Fe(PPIX)].
19 , b 17 for the PF complexes[6] ). Single-electron Kohn ± Sham (KS)
orbitals were expanded in a plane wave basis, with kinetic energy cut-off of
70 Ry (for the computations of PF complexes, this corresponds to 2 105 lowest energy, as was found for [FeP],[19] and this result is
plane waves per KS state, 1.6 106 plane waves for the density). Additional
independent of the orientation of the vinyl substituents. Both
computations with larger boxes and cut-off values (80 ± 90 Ry) were
performed for selected cases in order to verify the convergence of initial structures converged to a minimum, with the cis
structures and binding energies. conformation being more stable by 2.9 kcal molÿ1. This energy
difference is similar to that found by Kalsbeck et al.[25] in
related vinyl-substituted molecules, indicating that this con-
Results and Discussion formational flexibility of the vinyl substituents is a character-
istic property of a pyrrolic system.
Protoporphhyrin-IX-based systems Table 1 lists the main structural parameters of the opti-
mized [3Fe(PPIX)] structure. For the sake of comparison, the
1.A. Iron protoporphyrin IX: We performed a complete structure of [FeP], computed with the same method,[19] and
structural relaxation of the [Fe(PPIX)] molecule in the structure of the myoglobin heme group[26] are also listed.
three different spin states: singlet, triplet, and quintuplet To the best of our knowledge, no X-ray structure has been
([xFe(PPIX)], x 1, 3, 5). The initial [Fe(PPIX)] structure reported for a synthetic model based on [FeII(PPIX)]. Thus,
(see Figure 2) was taken from our previous [FeP] optimized the data in Table 1 is useful as a good approximation for the
structure of these synthetic models for which structural
information is not yet available.[9, 27] On the other hand, our
optimized structure is in good agreement with the structure of
the myoglobin prosthetic group. The symmetric pattern of
porphyrin CÿC bond lengths reflects the aromaticity of the
ring (e.g., C2ÿC3 C2'ÿC3' 1.38 ). The CÿC and CC bond
lengths of the vinyl substituents are 1.45 and 1.35 ,
respectively. The nearly D4h iron-porphyrin core of [Fe-
(PPIX)] has a very similar structure to that when substituent
groups are not present. There is a slight out-of-planarity of the
porphyrin atoms (the maximum ± minimum displacement is
0.1 in the outer pyrrolic carbon atoms).
Concerning the electronic structure, there is no direct
experimental information available on the ground state of a
Figure 2. Atom-numbering convention used to define the [Fe(PPIX)] [Fe(PPIX)] molecule. Nevertheless, related four-coordinate
structure.
FeII complexes like FeII-tetraphenyl-porphyrin ([FeTPP]) are
known to have a triplet ground state.[4, 28] The gas-phase [FeP],
structure, with the substituent PPIX groups attached in the for which first principles calculations are available, is also in a
same orientation as found in the crystal structure of myoglo- triplet ground state.[20e, 29] We found that the change in spin
bin.[26] In this structure, the vinyl CC atoms a cis conforma- state affects only the FeÿN distances, with values of 1.98
tion with respect to the C2ÿC3 porphyrin bond, pointing (triplet and singlet states) and 2.04 (quintuplet state). These
towards the nearest CH3 substituent.[24] However, the results values are the same as those found for [FeP].[19] The d-orbital
of resonance Raman measurements for a complex of [Fe- occupation of the triplet ground state is (dxy)2(dz2)2(dxz)1(dyz)1
(PPIX)] and other vinylhemins have suggested that two (independently of the vinyl conformation), which was also
torsional isomeric forms of each vinyl are in thermal found for [3FeP]. The computed Mulliken charges of [Fe-
equilibrium at room temperature.[25] DFT-LDA calculations (PPIX)] and [FeP] are also very similar (qFe 1.0, qN ÿ 0.4,
in small vinyl-substituted molecules and in a ZnII complex of qC1 0.2, qC5 ÿ 0.2, qH 0.3) except for the outer pyrrolic
1,5-dimethyl-2,6-divinylporphyrin support this conclusion, carbon atoms (qC2 ÿ 0.2 in [FeP] and 0.0 in [Fe(PPIX)], due
and they give an estimated energy difference between the to a change in one of the covalently attached atoms). Overall,
two isomers of less than 1.28 kcal molÿ1.[25] our analysis of the [Fe(PPIX)] molecule reveals that vinyl,
252 WILEY-VCH Verlag GmbH, D-69451 Weinheim, 1999 0947-6539/99/0501-0252 $ 17.50+.50/0 Chem. Eur. J. 1999, 5, No. 1
Heme Models 250 ± 262
Table 1. Calculated minimum structure (LSDGC) of the ground state Table 2. Main structural parameters and binding energies computed for
iron-protoporphyrin ([FePPIX]). The iron porphyrin ([FeP]) and the the O2 , CO, and NO complexes of [Fe(PPIX)]. Distances are given in ,
myoglobin (X-ray) structures are also included. Values in parenthesis refer angles in degrees, and energies in kcal molÿ1.
to the trans vinyl group. Distances are in and angles in degrees.
[Fe(PPIX)(AB)] [FeP(AB)]
[FePPIX] [FeP][19] Myoglobin[26]
AB O2
iron porphyrin structure[a] FeÿNp 2.01 2.01
FeÿN 1.99 1.98 1.90 ± 1.97
[b]
FeÿO 1.74 1.74
NÿC1 1.39 1.39 1.33 ± 1.40 OÿO 1.28 1.28
C1ÿC2 1.44 1.44 1.37 ± 1.50 aFe-O-O 124 123
C2ÿC3 1.38 1.36 1.32 ± 1.39 CTN[a] 0.30 0.30
C4ÿC5 1.38 1.38 1.36 ± 1.42 binding energy 9 9
C5ÿH 1.09 1.09 ±
AB CO
aFeNC1 127.1 ± 128.4 127.6 125.4 ± 130.9
FeÿNp 1.99 1.99
aNC4C5 124.1 ± 125.3 125.3 123.4 ± 126.1
FeÿC 1.69 1.69
aNC1C2 111.1 ± 111.5 110.7 111.4 ± 112.8
CÿO 1.17 1.17
aC1C2C3 105.9 ± 106.3 106.9 102.1 ± 110.6
aFe-C-O 180 180
aC4C5C4' 125.0 ± 125.3 123.8 119.9 ± 126.2
CTN 0.25 0.33
aC4C5H 116.8 ± 117.9 117.8 ±
binding energy 29 26
methyl structure
AB NO
C2ÿC6 1.50 1.52 ± 1.55
FeÿNp 2.03 2.03
C6ÿH 1.10 ±
FeÿN 1.69 1.69
aC3C2C6 128.5 (127.5) 127.3 ± 130.4
NÿO 1.19 1.19
aC2'C3'C6' 128.5 128.1 ± 129.7
aFe-N-O 155 150
aC2C6H 111.2 ± 111.9 ±
CTN 0.38 0.36
vinyl structure binding energy 34 35
C3ÿC7 1.45 1.41
C7C8 1.35 1.36 ± 1.39 [a] Displacement of the Fe atom (towards the diatomic molecule) with
C7ÿH 1.10 ± respect to the mean plane defined by the porphyrin nitrogens.
C8ÿH 1.09 ±
aC4C3C7 123.1 (129.7) 120.1 ± 121.5
aC3C7C8 129.0 (130.4) 129.7 ± 130.0 Table 3. Calculated atomic charges of the [Fe(PPIX)(AB)] complexes
aC3C7H 115.0 (113.5) ± (AB O2 , CO).[a]
aC7C8H 123.4 (123.4) ± atom Mulliken ESP atom Mulliken ESP
119.9 (120.1) ±
t C5C4C3C7 4.4 ( 1.4) 4.6 ± 8.2 PPIX [b]
1.B. Complexes with O2 , CO, and NO: Table 2 lists the main
structural parameters of the [Fe(PPIX)] complexes we have Kohn ± Sham orbitals of both [FeP(CO)] and [Fe(PPIX)-
studied, in comparison with the nonporphyrin-substituted (CO)] systems. The two orbital-level distributions share
complexes computed with the same method. Binding energies similar features. The molecular levels associated with covalent
of the diatomic molecule are also reported. Table 3 displays bonds (sXY; X, Y C, O, H, N) appear in the low-energy
the computed charges on the atoms, which will be used later region. Those corresponding to lone pairs of the oxygen atoms
on. According to Table 2, neither structural parameters nor (nO orbitals) and CO double bonds (pCO) appear in an
binding energies show any significant change with respect to intermediate energetic region between the first and d-Fe
the nonporphyrin-substituted complexes. orbitals, which are mixed with p* orbitals of CO (Fe !CO p
The similarity among both [FeP(AB)] and [Fe(PPIX)- back-bonding). However, the p levels of the vinyl substituents
(AB)] systems (AB O2 , CO, NO) is also apparent in the (pCC) appear close to the HOMO region, but only weakly
electronic structure. Figure 3 shows the distribution of the mixed with the d-Fe levels.
Chem. Eur. J. 1999, 5, No. 1 WILEY-VCH Verlag GmbH, D-69451 Weinheim, 1999 0947-6539/99/0501-0253 $ 17.50+.50/0 253
FULL PAPER M. Parrinello and C. Rovira
254 WILEY-VCH Verlag GmbH, D-69451 Weinheim, 1999 0947-6539/99/0501-0254 $ 17.50+.50/0 Chem. Eur. J. 1999, 5, No. 1
Heme Models 250 ± 262
a !b; the structure evolves rapidly towards a bent Fe-O-O imidazole (d) and the F angle by 38 (see the definition of these
(1218) with the O2 axis projection in the same porphyrin parameters in Figure 4).[41] Our calculations indicate that
quadrant as the imidazole. This orientation, defined in more changes in the FeÿNe bond length are closely related to
detail in Figure 4, corresponds to one of the four positions changes in the Fe-O-O angle and, in turn, to the energy of the
FeÿO bond. Before discussing this aspect in detail, it is useful
to analyze the changes in the electronic structure of the
system.
The origin of the small structural differences we observe
when changing the Fe-O-O angle are related to changes in the
electronic structure. The d-orbital configuration of Fe in the
bent structure (b or c) is the same as found for a small
[FeP(Im)(O2)] system:[19] an open-shell singlet whose filling of
the higher occupied orbitals can be written schematically as
(dxy)"#(dp1)"#(p g;s* )"#(dp2)"(p *g;a )# (A).
This electron distribution follows the semiempirical model
proposed by Hoffman et al. in the late 1970s,[42] with some
variation due to the spin polarization.[43] In this case one can
clearly differentiate these orbitals as having either iron or
oxygen character[44] (although a small dz2 component appears
in the third orbital, p g;s * , its relative contribution is very small).
It follows from the above orbital assignment (A) that the
FeÿO2 bond can be formally described as FeIIIÿO ÿ2 .
The electron distribution in the Fe-O-O linear conforma-
tion instead follows the scheme (dxy)"#(dxz p *g;1 )"#(dyz
* )"#(dxz ÿ p *g;1 )"(dyz ÿ p *g;2 )# (B).
p g;2
Because of the strong Fe/O 2 mixing, the classification of
these orbitals as Fe or O2 character is not straightforward.
Hence, neither the formal description FeIIIÿO ÿ2 nor FeIIÿO2 is
applicable here. The change in electronic configuration
Figure 4. Atom-numbering convention and parameters used to define the (A !B), with the total dissapearance of dz2 contribution in
[FeTpivPP(2-meIm)(O2)] structure. a) Iron-porphyrin structure (top view). the orbitals of B, is the cause of the shorter FeÿNe distance in
b) TpivP substituent. c) Orientation of the axial O2 and imidazole ligands the linear structure. The charge transfer into oxygen also
(side view). d) Same as c), view from top.
disappears, as evidenced by the shorter OÿO distance.
All the structure-energy changes discussed up to this point
found experimentally (see Scheme 3) and suggests that refer to the S 0 state. However, additional calculations have
orientation 1 could be the global minimum of the system. been performed for higher spin states. The relative energy of
The relative stability of other these states with respect to Fe-O-O bending is illustrated in
minima will be discussed in Figure 5. It turns out that triplet (S 1) is the ground state for
section 2.B.2. a linear Fe-O-O conformation, with the same electronic
A small displacement of the
porphyrin substituents away
from the O2 molecule occurs
during the full relaxation of
Scheme 3. Different orienta- the molecular structure (step
tions the O2 and 2-meIm li- b !c). This opening of the
gands obtained from the X-ray picket cage, is not equivalent
structure.
for the four TpivP substituents,
but is more pronounced for the
one closer to the terminal oxygen, as depicted in Scheme 3.
The energetic cost of bending the Fe-O-O angle is very large
(26 kcal molÿ1 in the a !b step), which indicates that a
significant change in FeÿO2 bonding is involved. In contrast,
the energetic cost for the cage opening (b !c) is very small
(6 kcal molÿ1). Other changes that occur upon bending are an
increase in the OÿO bond length (from 1.28 in a to 1.30 in
b, c) and in the FeÿNe bond length (from 2.03 in a to 2.11
Figure 5. Qualitative picture of the energy among different spin states of
in b, c). As a consequence of a longer FeÿNe bond, the steric [Fe(TpivPP)(2-meIm)(O2)] as a function of the Fe-O-O angle. Small energy
interaction between the imidazole methyl and the porphyrin differences are enlarged to improve the visualization (see exact values in
ring is partially relieved, which decreases the tilting of the the text).
Chem. Eur. J. 1999, 5, No. 1 WILEY-VCH Verlag GmbH, D-69451 Weinheim, 1999 0947-6539/99/0501-0255 $ 17.50+.50/0 255
FULL PAPER M. Parrinello and C. Rovira
configuration found for the open-shell singlet, (dxy)"#(dxz Table 4. Main structural parameters computed for the O2 and CO
* )"#(dyz p *g;2 )"#(dxz ÿ p *g;1 )"(dyz ÿ p *g;2 )",
p g;1 thus following complexes of [FeP(TpivPP)(2-meIm)]. Distances are given in and angles
in degrees.
Hunds rule.[45] The structural features of this linear Fe-O-O
triplet state are the same as those described for the linear Fe- Calculated Experimental[5d, 33a]
O-O open-shell singlet state (B). In the case of the bent aFe- PFO2 [FeP(Im)(O2)]
O-O, the lowest triplet state lies only 3 kcal molÿ1 above the FeÿNp 2.01 2.01 1.996(4)
FeÿNe 2.11 2.08 2.107(4)
open-shell singlet. Its electronic configuration is very similar
FeÿO 1.78 1.77 1.898(7)
to the open-shell singlet state (A), with a small mixing of the OÿO 1.30 1.30 > 1.22(2)[a]
dp2 orbital with dxy as a consequence of the loss of symmetry aFe-O-O 121.0 121.0 < 129(2)
by bending. The total energetic cost of distorting the FeO2 q 42.6 40 45
moiety from the bent global minimum (S 0, open-shell) d 4.5 0.0 7.1
CTN[b] 0.04 ÿ 0.07 0.086
structure to the linear Fe-O-O conformation (S 1) involves
NaÿH ´´´ O2 3.09 ± ±
15 kcal molÿ1. Because of this quite high value and the change
PFCO [FeP(Im)(CO)]
in spin associated with it, a linear Fe-O-O is unlikely to occur FeÿNp 2.01 2.02 2.02(3)[c]
with the room temperature fluctuation of the atomic posi- FeÿNe 2.11 2.07 2.10(1)
tions. This excludes it as a transition state for the mechanism FeÿC 1.72 1.72 1.77(2)
CÿO 1.17 1.17 1.12(2)
of O2 internal motion among the porphyrin quadrants.
aFe-C-O 180 180 179(2)
The minimum of the triplet state corresponds to a larger Fe- d 3.8 0.0 ±
O-O angle (1318) than that in the singlet state (1218), as we CTN 0.02 ÿ 0.08 ÿ 0.02
also found in a small [FeP(Im)(O2)] system.[20f] On the other
[a] aFe-O-O angle and OÿO distance are given as an upper and lower
hand, an S 0 closed-shell state is well-separated in energy in bound respectively. [b] A positive value of CtN indicates a displacement
the linear conformation (22 kcal molÿ1 with respect to the towards the imidazole ligand. [c] Data corresponding to [Fe(TPP)(py)-
ground triplet state), but becomes very close to the ground (CO)].[33a]
state in the bent conformation (1.4 kcal molÿ1). Its electronic
configuration can be schematized as (dxy)"#p *g;s )"#(dp1)"#(dp2)"#
Table 5. Calculated minimum structure (LSDGC) of the ground state
(C) in both conformations. For such a large system, a PFO2 . The isolated [FeP(Im)(O2)][19] and TpivP structures and the
difference of 1.4 kcal molÿ1 is at the limit of the accuracy of experimental structure of PFO2 are also included.[5d] Distances are given
the method used. Moreover, there is a strong experimental in and angles in degrees.
evidence of a diamagnetic state over a wide range of parameter[a] PFO2 [FeP(Im)(O2)]
temperatures.[4, 7, 11e,g] Together with the fact that solvation or calculated exp[b]
condensed-matter effects are not not included in our treat- iron porphyrin[c]
ment, we cannot differenciate between the two singlet states FeÿN 2.01 1.997(4)/1.995(4) 2.01
as being the ground state of the bent FeO2 . NÿC1 1.39 1.363(6) ± 1.392(6) 1.39
In summary, three spin states (S 0 open-shell, S 0 closed C1ÿC2 1.44 1.424(6) ± 1.453(6) 1.44
C2ÿC3 1.36 1.339(7)/1.315(7) 1.36
shell and S 1) are in competition as the Fe-O-O angle bends.
C4ÿC5 1.40 1.385(6)/1.399(6) 1.38
Although well-separated in energy for a linear Fe-O-O angle, C2ÿH 1.09 ± 1.09
the three spin states become very close (within 3 kcal molÿ1), aFeNC1 127.8 127.0(3) ± 127.8(3) 127.6
and two of them reverse in energetic order, when the Fe-O-O aNC4C5 124.7 125.4(4)/124.9(4) 125.3
aNC1C2 111.3 110.0(4) ± 109.8(4) 110.7
angle bends. Therefore, there should be a spin crossing region
aC1C2C3 106.1 106.6(4) ± 108.1(4) 106.9
along the Fe-O-O reaction coordinate, in which the three spin aC4C5C4' 125.1 124.5(4)/123.9(4) 123.8
states could be mixed by spin ± orbit interaction. Since these aC4C5C6 117.8 ± 117.8
energy-spin relations are shared with the small [FeP(Im)(O2)] axial imidazole
complex, the existence of these three energetically close spin NeÿC12 1.34 1.33 1.39
states seems to be a peculiarity of O2 binding to a FeP(Im) NeÿC13 1.39 1.33 1.39
NdÿC12 1.36 1.32 1.35
derivative. On the other hand, our results show that variations
NdÿC14 1.38 1.36 1.38
in the Fe-O-O angle and FeÿNe bond lengths, weakening the C13ÿC14 1.37 1.32 1.37
FeÿO bond, are closely related to changes in the spin state of C12ÿC15 1.49 1.54 ±
the system: a triplet state is favored by a short FeÿNe distance C13ÿH 1.08 ± 1.08
C14ÿH 1.08 ± 1.08
and large Fe-O-O angle, while the opposite favors a singlet
C15ÿH 1.10 ±
state. In the context of the protein, this suggests that an NdÿH 1.02 1.02
appropriate tension through the proximal histidine and/or a f,d 20.7,5.2 22.2,7.1 11.5,0.0
steric hindrance opening the Fe-O-O angle could change the aFeNeC12 132.5 127.8
spin state of heme. aC12NeC13 106.2 101.6 106.2
aC12NdC14 109.3 105.4 108.5
aC13C14Nd 105.1 105.3 105.6
2.B.2. Minimum-energy structure: The minimum-energy struc- aNeC12C15 130.3 122.3 ±
ture parameters of the [FeTpivPP(2-meIm)(O2)] molecule aC12C15H 110.5 ± ±
(i.e., corresponding to a bent Fe-O-O angle) is reported in aNeC13H 121.4 ± 121.6
aC13C14H 132.1 ± 132.3
Tables 4 and 5 (see Figure 4 for the geometry definition).
aC12NdH 124.4 ± 125.8
Table 4 lists the most important structural parameters, defin-
Table 5. Continued.
parameter[a] PFO2 [FeP(Im)(O2)]
calculated exp[b]
porphyrin TpivP
CaO 1.23 1.190(7)/1.279(8) 1.23
NaÿCa 1.38 1.314(7)/1.254(8) 1.38
CaÿCb 1.55 1.505(9)/1.479(9) 1.55
NaÿH 1.02 ± 1.02
CbÿCg 1.55 1.42(5)/1.66(5)[d] 1.54
CgÿH 1.10 ± 1.10
NaÿC7 1.41 1.42
C6ÿC7 1.42 1.41
C7ÿC8 1.41 1.40
C8ÿC9 1.39 1.40
C9ÿC10 1.40 1.40
C10ÿC11 1.40 1.40
C6ÿC11 1.40 1.40
aC5C6C7 122.9 121.2(5)/120.6(5) 119.7
aC8C7Na 122.9 121.1(6)/123.0(6) 122.2
aC7NaCa 128.6 128.7(5)/134.1(6) 127.5
aNaCaO 123.2 120.6(7)/120.6(7) 122.8
aNaCaCb 116.8 118.3(6)/123.5(7) Figure 6. Comparison of the computed [FeTpivPP(2-meIm)(O2)] structure
aC7NaH 115.0 ± 115.5 (black line) with the X-ray structure (white line). The four and two
aCaCbC 1g 114.7 118.0(7)/110.3(7) 114.9 equivalent positions, respectively, for the O2 and 2-meIm ligands of the
aCaCbC 2g 106.7 110.5(7)/110.7(7) 107.2 crystal structure are shown. Hydrogen atoms of the computed structure
aCaCbC 3g 106.7 108.2(13)/104.1(10) 106.4 have been omitted for clarity.
aC11C6C7 118.5 118.1(5)/119.7(5) 120.4
aC11C10C9 119.0 119.5(7)/120.8(6) 119.2
aC9C8C7 120.4 119.0(7)/119.6(6) 119.6
aC7C8H 118.5 ± 119.4
t CaNaC7C8 4.9* ± 15.0 14.8/28.7 24.0 (see Scheme 3). As a consequence, the displacement of one of
t CbCaONa 179.5 175.4 180.3 the TpivP substituents when the terminal oxygen gets close is
not accounted for. This explains why the differences between
[a] Covalent distances and angles do not show significant differences
among the four TpivP substituents (the report value corresponds to the calculation and experiment are larger for one of the TpivP
average). Values indicated with an asterisk correspond to the TpivP substituents, as well as for the tilting of the 2-meIm axial
substituent closer to the terminal oxygen atom. [b] Values in parenthesis ligand. In order to know the relative stability of other minima
correspond to the standard deviation. [c] Note that because of the effective with respect to O2 rotation (see Scheme 3), we have per-
D4h symmetry of the iron porphyrin, atoms with the same number are
formed a structural optimization starting from the PF
equivalent with respect to the internal [FeP] geometry (e.g., C2ÿC3
C2'ÿC3'). [d] The large range of values is due to thermal and/or irresolvable structure at the first minimum (1) and rotating the O2
disorder. molecule according to orientation (2).[38] A second local
minimum is in fact found at q 1358 (see Figure 4). The
energy of this minimum lies only 0.2 kcal molÿ1 higher in
ing the orientation of the O2 and 2-meIm ligands. Table 5 energy than the first minimum (f 458). This small energy
reports the internal geometry of the fragments that form the difference is at the limit of the accuracy of our method, and we
PFO2 molecule (iron porphyrin, 2-meIm ligand and TpivP conclude that both minima are energetically equivalent.
substituents). The computed values are compared with the Disregarding the O2 orientation, the structure of the second
experimental X-ray structure and with the structure of minimum (OÿO 1.30 , FeÿO 1.78 , aFe-O-O 1208,
[FeP(Im)(O2)] and TpivP molecules, computed with the same FeÿNp 2.01 , FeÿNe 2.14 ) is very similar to the first (1
method. Because of the C2 symmetry of the X-ray structure, in Scheme 3). We have performed additional calculations
two experimental values are reported in Table 5 for each considering an orientation of the oxygen molecule in such a
structural parameter. The computed structure is in good way that its OÿO axis projection onto the Np plane overlaps
agreement with experimental results. Only slight discrepan- one of the FeÿNp bonds. This computation was done by fixing
cies arise in some parts of the structure not precisely known the Np-Fe-O1-O2 dihedral angle and optimizing the structure
like the FeO2 internal geometry [OÿO (exp) > 1.22, Fe-O-O with respect to all other degrees of freedom. The correspond-
(exp) < 1298] and the C(CH3)3 groups of the TpivP substituents, ing optimized structure was found to be only 1.8 kcal molÿ1
which are affected by thermal motion and/or irresolvable higher in energy than the first minimum (1 in Scheme 3).
disorder.[5d] Our results reflect a substantial expansion of the Given this small energy difference, rotation of the O2 ligand
OÿO distance (1.30 ) from its gas phase value (1.21 ), as a around the FeÿO bond (see
consequence of the charge transfer associated with the p back Scheme 4) at room temperature
bonding d(Fe) !p*(O2). Figure 6 contrasts the experimental probably takes place on a short
structure (all positions of the disordered O2 are displayed) time scale. Temperature effects
with the calculated one. The experimental effective C2 on the dynamics of O2 motion
symmetry structure for the Fe(TpivPP) fragment results from will be addressed in a separate Scheme 4. Most likely mecha-
an average over the different orientations of the O2 ligand publication.[46] nism of O2 motion in PFO2 .
Chem. Eur. J. 1999, 5, No. 1 WILEY-VCH Verlag GmbH, D-69451 Weinheim, 1999 0947-6539/99/0501-0257 $ 17.50+.50/0 257
FULL PAPER M. Parrinello and C. Rovira
The possibility of the O2 being hydrogen bonded to the apparently shorter CO bond, reflecting the projection of the
amino group of TpivP is supported by several experimental CO bond on the librational axis and not its true bond length.
studies. In particular the NMR chemical shift of the amide A linear Fe-C-O bond is found in the experimental [FeTPP-
hydrogen has been taken as an indication of a hydrogen (py)(CO)] structure and in the three CO complexes of [FeP]
bond.[11e] The computed H ´´´ O distance (3.09 and 2.93 that we have studied to date (PFCO, [FeP(Im)(CO)], and
for the first and second minimum, respectively) is too large to [FeP(CO)]). Related heme ± CO synthetic models also show a
be classified as a hydrogen bond. However, as will be linear CO.[33b] The detailed structure of the PFCO complex is
discussed in section 2.D, a significant electrostatic stabiliza- reported in Table 6. Although the data show little change with
tion of the ligand occurs. respect to the PFO2 system, it can be useful as an approx-
In summary, the computed PFO2 structure is in good imation to the unknown structure of this CO complex.
agreement with the X-ray structure, and complements it in the
determination of several details, like the subtle structural 2.D. Strength of Fe diatomic bonds: The computed binding
deformations induced by O2 motion, the structure of the energy of the picket-fence complexes with CO and O2 is
FeÿO2 and FeÿIm bonding, and the position of hydrogen reported in Table 7. We also include the results obtained, with
atoms. the same method, for the nonsubstituted systems ([FeP-
(Im)(AB)] and [FeP(AB)], AB O2 , CO). The values of
2.C. The complex with carbon monoxide: The picket-fence Table 7 show that the strength of ligand binding is significantly
complex with carbon monoxide, [FeTpivP(2-meIm)(CO)] enhanced by the TpivP substituents. The energy increase
(hereafter abbreviated as PFCO), is of interest as a synthetic (32 kcal molÿ1 for O2 and 28 kcal molÿ1 for CO) is larger that
model for the CO complex of myoglobin (mbCO). In this observed with the addition of an imidazole axial ligand
respect, several experimental data for the CO-binding reac- (6 kcal molÿ1 and 9 kcal molÿ1, respectively) and contrasts with
tion with this picket-fence complex are available.[4] However, the results obtained for protoheme complexes (Table 2), in
unlike its O2 analogue, the X-ray structure of the PFCO which the binding energy is not affected by this particular
complex has not yet been obtained. The most closely related porphyrin substitution.
CO complex for which an X-ray structure has been reported is The origin of the different behavior between the picket
[FeTPP(py)(CO)], which contains a pyridine molecule in- fence and protoheme is probably related to the polarity of the
stead of imidazole as the axial ligand and lacks the pivalamino porphyrin substituents. In the case of the picket fence, the
substituents.[33a] dipole moment of the amide groups of each TpivP is oriented
The initial structure of the PFCO complex in our study is towards the diatomic ligand, which results in a stabilizing
taken from the minimum-PFO2 structure, substituting the interaction with the dipole of the FeO2 or FeCO fragments. In
axial ligand by CO. The calculation is performed with the the case of [Fe(PPIX)], the polar acidic groups (see
LDAGC approximation, since CO heme models are typical Figure 1a) are far from the ligand position (5 ± 7 from
examples of low-spin ferrous complexes.[33c] Table 4 reports the terminal atom of the diatomic ligand). Moreover, due
the main structural parameters defining the equilibrium to their relative position (on opposite sides of the porphyrin)
PFCO structure, in comparison with its O2 analogue and with the total electrostatic interaction with the diatomic would
the nonsubstituted complex [FeP(Im)(CO)]. The computed vanish.
data are also compared with the experimental X-ray structure An estimation of the electrostatic interaction between the
of [FeTPP(py)(CO)]. Despite the structural differences diatomic molecule and the porphyrin substituents can be
between both molecules, there is a good agreement between obtained from the computed charges on the atoms (Table 8).
the computed structure of PFCO and the experimental Using a simple formula, U Sqi ´ qj/Rij, we obtained a large
structure of [FeTPP(py)(CO)]. The agreement in the FeÿNe stabilizing interaction of the ligand in the picket-fence
bond length, however, is likely to be fortuitous. Since pyridine complexes (21 kcal molÿ1 for O2 and 15 kcal molÿ1 for CO),
is less basic than imidazole,[11c] the bond should be shorter for but almost negligible in the protoheme complexes. Since we
imidazole. However the steric hindrance of the 2-me sub- did not observe changes in the FeÿO and FeÿC bond orders
stituent makes it similar to that of pyridine. As in the case of on attaching the picket substituents, we conclude that electro-
the PFO2 system, the main [FeP(Im)(CO)] structure is found static interactions are the responsible for the large increase in
to be insensitive with respect to the addition of the TpivP binding energy. That the environment could play a major role
substituents (again the only difference is in the FeÿNe bond in controlling the ligand binding to iron in heme models and,
length, which is a consequence of the 2-me group). The main probably, also in myoglobin is in agreement with the
discrepancy between our computed PFCO structure and the conclusions of site-directed mutagenesis experiments[3a] and
experimental [FeTPP(py)(CO)] structure concerns the FeÿC the recent evidence for the high oxygen affinity of Ascaris
and CÿO bond lengths, which are 3 % larger and 4 % shorter, hemoglobin.[15] The stabilizing effect of a polar environment is
respectively, in the experimental structure (the experimental also consistent with measurements of ligand-binding affinities
CÿO bond length, 1.12 , is, surprisingly, shorter than the in heme models.[4, 7, 10, 14] Although there is a wide range of
value for an isolated CO molecule, 1.13 ). However, room measurements in the literature, low affinities are found, in
temperature CPMD simulations showed oscillations of 188 general, for binding pockets of low polarity.[10, 14] An example
and 128 in the FeÿCO bend and tilting angles, respectively, for of the significant influence of the binding-pocket polarity and
a [FeP(Im)(CO)] model.[46] This large librational motion stereochemistry is provided by the high O2 affinity recently
could complicate the structural analysis and lead to an found in dendrite porphyrins.[10e]
258 WILEY-VCH Verlag GmbH, D-69451 Weinheim, 1999 0947-6539/99/0501-0258 $ 17.50+.50/0 Chem. Eur. J. 1999, 5, No. 1
Heme Models 250 ± 262
Table 6. Calculated minimum structure (LSDGC) of the ground state Table 7. Binding energies (kcal molÿ1) of the picket-fence complexes
[FeP(TpivPP)(2-meIm)(CO)] (PFCO). The isolated [FeP(Im)(CO)][19] is investigated and related nonporphyrin-substituted complexes,[21] with
also included. Distances are given in and angles in degrees. respect to O2 and CO dissociation.
parameter[a] [Fe(TpivPP)(2-meIm)(CO)] [FeP(Im)(CO)] O2 complex DE CO complex DE
Chem. Eur. J. 1999, 5, No. 1 WILEY-VCH Verlag GmbH, D-69451 Weinheim, 1999 0947-6539/99/0501-0259 $ 17.50+.50/0 259
FULL PAPER M. Parrinello and C. Rovira
260 WILEY-VCH Verlag GmbH, D-69451 Weinheim, 1999 0947-6539/99/0501-0260 $ 17.50+.50/0 Chem. Eur. J. 1999, 5, No. 1
Heme Models 250 ± 262
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Chem. Eur. J. 1999, 5, No. 1 WILEY-VCH Verlag GmbH, D-69451 Weinheim, 1999 0947-6539/99/0501-0261 $ 17.50+.50/0 261
FULL PAPER M. Parrinello and C. Rovira
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* )"
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imidazole, there are only two independent orientations for the O2 difference in binding energy at 25 8C. Thus, a variation of 7 orders
ligand: the OÿO axis projection in the same quadrant as the 2-meIm of magnitude in Keq corresponds to 10 kcal molÿ1 increase of binding
ligand (1 1') or in a different quadrant (2 2'). energy.
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[41] a) The preferred orientation of the 2-meIm ligand is a compromise
between a maximum NpÿFed bonding, achieved with an eclipsed 2
e0 ÿ 1 m 2
DU ÿ (1)
conformation (F 08) and a minimum steric interaction with the 2e0 1 a3
FeÿNp bonds, which is achieved in a bisecting conformation (F 458);
b) W. R.Scheidt, D. M. Chipman, J. Am. Chem. Soc. 1986, 108, 1163. Received: February 26, 1998
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262 WILEY-VCH Verlag GmbH, D-69451 Weinheim, 1999 0947-6539/99/0501-0262 $ 17.50+.50/0 Chem. Eur. J. 1999, 5, No. 1