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Experimental Parasitology 122 (2009) 47–50

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Experimental Parasitology
journal homepage: www.elsevier.com/locate/yexpr

Toxoplasma gondii: Sensitive and rapid detection of infection by loop-mediated


isothermal amplification (LAMP) method
Houshuang Zhang a, Oriel M.M. Thekisoe a, Gabriel O. Aboge a, Hisako Kyan b, Junya Yamagishi a,
Noboru Inoue a, Yoshifumi Nishikawa a, Satoshi Zakimi c, Xuenan Xuan a,*
a
National Research Center for Protozoan Diseases, Obihiro University of Agriculture and Veterinary Medicine, Inada-cho, Obihiro, Hokkaido 080-8555, Japan
b
Okinawa Prefectual Meat Inspection Office, Ominami 1-13-11, Nago, Okinawa 905-0015, Japan
c
Okinawa Prefectural Institute of Animal Health, Kohagura 112, Naha, Okinawa 900-0024, Japan

a r t i c l e i n f o a b s t r a c t

Article history: Loop-mediated isothermal amplification (LAMP) method amplifies DNA with high specificity, sensitivity
Received 12 October 2008 and rapidity. In this study, we used a conserved sequence in the 200- to 300-fold repetitive 529 bp gene
Received in revised form 20 December 2008 of Toxoplasma gondii to design primers for LAMP test. Detection limit of T. gondii LAMP assay with the
Accepted 26 January 2009
primers is 1 pg/lL of T. gondii DNA, which was evaluated using 10-fold serially diluted DNA of cultured
Available online 1 February 2009
parasites. Furthermore, LAMP and conventional PCR methods were applied for amplification of the T. gon-
dii DNA extracted from the lymph nodes taken from pigs which were suspected to be Toxoplasma infec-
Keywords:
tion. As a result, 76.9% (70/91) and 85.7% (78/91) of the samples were positive on PCR and LAMP analyzes,
Toxoplasma gondii
Loop-mediated isothermal amplification
respectively. Therefore, the LAMP has a potential to be applied as an alternative molecular diagnostic tool
(LAMP) for detection of T. gondii infection from veterinary samples. This is the first study, which applies the LAMP
529 bp gene method to diagnose Toxoplasma from veterinary samples.
Ó 2009 Elsevier Inc. All rights reserved.

1. Introduction infections, whilst PCR methods are limited by need for expensive
equipment.
Toxoplasma gondii is an obligate intracellular protozoan parasite A novel nucleic acid amplification method, loop-mediated iso-
belonging to the phylum Apicomplexa, subclass Coccidia. Infection thermal amplification (LAMP), which amplifies DNA with high
by parasite can be acquired by eating raw meat containing tissue specificity, efficiency, simplicity and rapidity under isothermal
cysts, or food and water contaminated by oocysts (Dubey, 2004). conditions has recently been developed (Notomi et al., 2000). Since
The clinical manifestation is usually benign in immunocompetent the advent of the LAMP, it has been developed for detection of
hosts, but can be life-threatening in an immunocompromised pa- many viral, bacterial, protozoan and fungal diseases (Kuboki
tients (Luft and Remington, 1985). et al., 2003; Maruyama et al., 2003; Endo et al., 2004; Okafuji
Diagnosis of toxoplasmosis can be achieved by a number of dif- et al., 2005). Recently, this method of novel gene amplification
ferent methods. Serological methods like indirect fluorescent anti- has been developed and used successfully for the diagnosis of par-
body test (IFAT) and enzyme-linked immunosorbent assays (ELISA) asitic infections, such as malaria, trypanosomiasis, theileriosis and
are used to detect antibodies against T. gondii (Jannuzzi et al., 1981; babesiosis (Poon et al., 2006; Alhassan et al., 2007a,b; Iseki et al.,
Mondesire et al., 1981). Immunohistochemical staining and poly- 2007; Thekisoe et al., 2007a,b,c; Njiru et al., 2008). As a result,
merase chain reaction (PCR) methods are also used for specific LAMP has been reported to be a highly sensitive and specific meth-
diagnosis of T. gondii infection (Dubey and Beattie, 1988). The mod- od for the detection of parasitic infections. Moreover, LAMP is an
ified agglutination test (MAT), immunochromatographic test (ICT) attractive diagnostic method in resource poor countries where
and the real-time PCR have also been developed as diagnostic facilities are minimal as a rapid test, independent of specialized
methods for T. gondii infection (Huang et al., 2004; Edvinsson heating equipments.
et al., 2006; Mainar-Jaime and Barberán, 2007). Despite these ad- The 200- to 300-fold repetitive 529 bp fragment of T. gondii
vances, diagnosis of T. gondii infection remains unsatisfactory be- have been utilized for the development of a very sensitive and spe-
cause serological methods cannot differentiate past and present cific PCR for diagnostic purposes, and in a quantitative competi-
tive-PCR for the evaluation of cyst numbers in the brains of
chronically infected mice (Homan et al., 2000; Edvinsson et al.,
* Corresponding author. Fax: +81 155 49 5643. 2006). In this study, we used the conserved region in the 529 bp
E-mail address: gen@obihiro.ac.jp (X. Xuan). gene to design LAMP primers, for sensitive and specific detection

0014-4894/$ - see front matter Ó 2009 Elsevier Inc. All rights reserved.
doi:10.1016/j.exppara.2009.01.012
48 H. Zhang et al. / Experimental Parasitology 122 (2009) 47–50

of T. gondii. Furthermore, we evaluated the detection sensitivity of Table 1


T. gondii LAMP in comparison with the conventional PCR on swine Nucleotide sequences of LAMP primers designed in this study.

DNA samples. Primer Sequence (50 –30 )


F3 CCACAGAAGGGACAGAAGTC
B3 TCCGGTGTCTCTTTTTCCAC
2. Materials and methods FIP TCCTCACCCTCGCCTTCATCTAGGACTACAGACGCGATGC
BIP TGGTTGGGAAGCGACGAGAGTTCCAGGAAAAGCAGCCAAG
LF TCCAAGACGGCTGGAGGAG
2.1. Parasite culture and DNA extraction
LB CGGAGAGGGAGAAGATGTTTCC

Parasites were cultured and purified as described previously


(Zhang et al., 2006). Briefly, T. gondii tachyzoites (RH strain) were
maintained in African green monkey kidney (Vero) cells cultured Table 1. LAMP was carried out with the Loopamp DNA amplifica-
in a minimum essential medium (MEM, Sigma, MO, USA) supple- tion kit (Eiken Chemical Co. Ltd., Tokyo, Japan). In brief, the LAMP
mented with 8% heat-inactivated fetal bovine serum (FBS) and reaction mixture (25 lL) contained 1 lL of template DNA, 40 pmol
50 lg/ml kanamycin at 37 °C in a 5% CO2 air environment. For each of FIP and BIP, 5 pmol each of F3 and B3, 20 pmol each of LF
the purification of T. gondii tachyzoites, parasites and host cell deb- and LB, 8 U of Bst DNA polymerase, 1.4 mM deoxynucleoside
ris were washed in cold phosphate-buffered saline (PBS), and the triphosphates (dNTP), 2  reaction buffer (1.6 M betaine, 40 mM
final pellet was resuspended in cold PBS and passed three times Tris–HCl (pH 8.8), 20 mM KCl, 20 mM (NH4)2SO4, 16 mM MgSO4,
through a 27-gauge needle syringe. The parasites were then fil- and 0.2% Tween 20). One microliter of fluorescent detection
tered through a 5.0 lm pore filter (Millipore, MA, USA), washed reagent (Eiken Chemical Co. Ltd., Tokyo, Japan) was added in some
twice with 10 ml of PBS, and pelleted at 1500 rpm for 10 min. of the reactions and in such reactions the volume of DDW was
The purified parasites were resuspended in a DNA extraction buffer adjusted. The reaction mixture was incubated at 63 °C for 1 h in
and DNA was extracted with a Dneasy Tissue Kit (Qiagen, Mary- a loopamp real-time turbidimeter (LA-200, Teramecs Co. Ltd.,
land, USA) according to the manufacturer’s instructions. Kyoto, Japan).

2.2. Swine sample collection and DNA extraction 2.5. Detection of LAMP product

A total of 91 lymph node (mainly mesenteric) samples with The LAMP products were electrophoresed in an 1.5% agarose
hemorrhagic or necrotic lesions suspected of toxoplasmosis were gels stained with ethidium bromide solution (1 lg/ml) and visual-
obtained from 91 pigs at an abattoir on Okinawa Island in Japan ized under UV light. Visual inspection of the LAMP amplicons in the
from 2003 to 2005 (Zakimi et al., 2006). Parasite DNA was ex- reaction tube were performed by adding fluorescent detection re-
tracted from the lymph node samples using a SepaGene kit (San- agent before the incubation of the reaction tubes, the fluorescent
kyo Junyaku, Tokyo, Japan) according to the manufacturer’s signals of the solutions were observed under UV light.
protocol. The purified DNA was dissolved in 20 lL of double-dis-
tilled water (DDW) for subsequent LAMP and PCR reactions. Nega- 2.6. Specificity and sensitivity of LAMP
tive control DNA was extracted from the lymph node of a specific
pathogen-free pig. The reaction temperature was optimized by conducting LAMP
reactions at different temperatures including 60, 63, 65 and 68 °C
2.3. PCR to determine the temperature which gives fastest time for a posi-
tive reaction using loopamp real-time turbidimeter. The species
A pair of oligonucleotide primer sequences TOX4 (50 - specificity of the T. gondii LAMP primers was determined by testing
CGCTGCAGGGAGGAAGACGAAAGTTG-30 ) and TOX5 (50 -CGCTGCAG them against DNA of Neospora caninum, Babesia gibsoni, B. bovis,
ACACAGTGCATCTGGATT-30 ) were selected to specifically amplify Cryptosporidium parvum, Trypanosoma brucei and Theileria parva.
T. gondii targeting the 529 bp DNA fragment (GenBank Accession The sensitivity of the assay was confirmed using genomic DNA,
No. AF146527) as described previously (Homan et al., 2000). which was diluted to contain an amount of DNA equivalent to a
Briefly, PCR was performed in 50 lL of a reaction mixture contain- range of 1–10,000 tachyzoites per LAMP and PCR reaction. Further-
ing 2 lL of template DNA, 5 lL of a 10 PCR buffer, 5 lL of 2 mM more, detection sensitivity of LAMP in comparison to the conven-
each of the four deoxynucleoside triphosphates (dNTP) mixture, tional PCR was determined using lymph node samples collected
0.25 lL of 0.5 U AmpliTaq Gold Taq DNA polymerase (Applied Bio- from pigs.
systems, NJ, USA), 2 lL each of 10 pmol primers and 33.75 lL
DDW. The amplification conditions consisted of initial denatur- 3. Results and discussion
ation at 94 °C for 7 min, followed by 35 cycles of 94 °C for 1 min,
primer annealing at 55 °C for 1 min, extension at 72 °C for 1 min The optimal reaction temperature for the T. gondii LAMP assay
and a final extension at 72 °C for 10 min. PCR products were elec- was found to be 63 °C as it gave faster threshold times (mean
trophoresed in a 1.5% agarose gel and stained with ethidium bro- 20 min) for positive LAMP reactions using 1 ng/lL of T. gondii
mide for visualization. DNA (Fig. 1). The results revealed that LAMP could further be
exploited for field test because the LAMP amplification can be per-
2.4. LAMP formed under isothermal conditions at 63 °C within 1 h using the
simple heating device such as a water bath or heat block (Notomi
Six oligonucleotide primers were used for the LAMP assay tar- et al., 2000).
geting eight conserved regions within the sequence of 529 bp To determine the specificity of T. gondii LAMP assay, reactions
DNA fragment of T. gondii. The outer forward primer (F3), outer were conducted for amplification of T. gondii DNA including non-
backward primer (B3), forward inner primer (FIP), backward inner target DNA from other protozoan parasites including N. caninum,
primer (BIP), loop forward (LF) and backward (LB) primers were B. gibsoni, B. bovis, C. parvum, T. brucei and T. parva. As a result, only
designed using PrimerExplorer V4 software (http://primerexplor- T. gondii DNA was amplified, whereas non-target DNA of other par-
er.jp/elamp4.0.0/index. html). All primer sequences are listed in asites was not amplified during the 60-min LAMP reaction as ex-
H. Zhang et al. / Experimental Parasitology 122 (2009) 47–50 49

0.5 Table 2
T. gondii Comparison of the conventional PCR and loop-mediated isothermal amplification
0.4 (LAMP) for detection of T. gondii from veterinary samples collected from pigs.
N. caninum

0.3
B. gibsoni No. (%) with LAMP Total No. (%)
Turbidity

B. bovis
+ 
0.2 C. parvum
No. (%) with PCR + 70 (76.9) 0 (0) 70 (76.9)
T. brucei
 8 (8.8) 13 (14.3) 21 (23.1)
0.1 T. parva
Total No. (%) 78 (85.7) 13 (14.3) 91 (100)
0
16

24

28

48

60
0

8
12

20

32

36

40

44

52

56
-0.1
Time (min) nodes of the field-infected pigs. The high sensitivity of LAMP is due
to six primers used in the reaction, which target eight distinct
Fig. 1. Specificity of LAMP method. LAMP reaction was monitored for DNA
internal regions on the target DNA and can detect DNA as few as
amplification of Toxoplasma gondii, Neospora caninum, Babesia gibsoni, B. bovis,
Cryptosporidium parvum, Trypanosoma brucei and Theileria parva by loopamp real- six copies (Nagamine et al., 2002). As shown in the results, the
time turbidimeter. The curve shows the amplification from T. gondii DNA, and no amplification products of templates were detected after 20 min,
reaction was observed from other species. and 60 min amplification, which produced the best result when
monitored by loopamp real-time turbidimeter (Fig. 1). Moreover,
PCR with the 529 bp fragment has proved to be more sensitive than
pected, whereby results were observed by loopamp real-time tur- that based on the 35-copy B1 gene (Homan et al., 2000; Edvinsson
bidimeter (Fig. 1). The 529 bp fragment discriminated DNA of T. et al., 2006), which is further to insure the sensitivity of LAMP as-
gondii from those of other parasites (Echinococcus granulosis, Giar- say. These findings are in agreement with previous reports that the
dia duodenalis, P. falciparum, Sarcocystis spp., Trichinella spiralis, sensitivity of LAMP method is higher when compared to the con-
Trichomonas vaginalis and N. caninum) have been confirmed in pre- ventional PCR in detection of protozoan parasites such as Trypano-
vious study (Homan et al., 2000). Moreover, LAMP employs four soma spp., Theileria spp. and Babesia spp. (Thekisoe et al., 2005;
primers (F3, B3, FIP, and BIP) in the initial steps and two primers Alhassan et al., 2007a; Iseki et al., 2007).
(FIP and BIP) during the subsequent steps, thereby insuring high The LAMP and conventional PCR assays were applied for detec-
specificity for target amplification (Notomi et al., 2000; Iwasaki tion of T. gondii DNA from veterinary samples collected from pigs,
et al., 2003). the presence of the parasites had been determined by microscopic
The genomic DNA of T. gondii tachyzoites was quantified from examination of an acridine orange-stained stamp-smear sample
1 ng down to 10 fg by 10-fold serial dilutions and used to evaluate (59.3% were positive). The LAMP products were visualized under
the sensitivity of T. gondii LAMP assay in comparison to the con- UV light, the fluorescent signals of the solutions were observed
ventional PCR method. As shown in Fig. 2A and B, the detection in the positive reactions without opening the tubes. For further
limit of PCR and LAMP is 10 and 1 pg, respectively. One picogram confirmation, the products were electrophoresed in an 1.5% aga-
of DNA represents approximately one T. gondii tachyzoite. These rose gels stained with ethidium bromide solution and similar posi-
results indicated that the sensitivity of T. gondii LAMP assay is tive results were observed. Seventy out of 91 (76.9%) and 78/91
slightly higher than that of the conventional PCR method for detec- (85.7%) of the tested samples were positive by PCR and LAMP,
tion of T. gondii DNA from in vitro cultured tachyzoites and lymph respectively (Table 2). All of the microscopically and PCR-positive
samples were also positive by LAMP. Once again LAMP showed
superior sensitivity than the conventional PCR for detection of T.
gondii infections from veterinary samples. An added advantage of
LAMP is that DNA amplification can be easily detected by visual
inspection of the turbidity or fluorescence of the reaction mixture,
or by loopamp real-time turbidimeter (Notomi et al., 2000; Mori
et al., 2001; Poon et al., 2006; Boehme et al., 2007). The visual
inspection does not only reduce the assay time, but also alleviate
the need for gel electrophoresis, and thus make the method adept
to field tests. These phenomena allow easy and rapid visual identi-
fication of amplified LAMP products, and enable LAMP to be ap-
plied as a rapid molecular diagnostic tool even in resource poor
countries.
In conclusion, the current results have demonstrated that the
LAMP method can be applied for detection of T. gondii parasites
for both in vitro cultured and field-infected samples. The experi-
ment protocol and the optimized conditions resulted in specific,
sensitive, rapid and easy detection of T. gondii DNA. Therefore,
LAMP method constitutes a powerful tool for the detection of T.
gondii infection, and further research for evaluation of the method
for the application to clinical diagnosis is required.

Acknowledgments

Fig. 2. Sensitivity of the LAMP and conventional PCR method. LAMP and PCR This research was supported by a grant from The 21st Century
methods were carried out using the extracted DNAs from parasites in the in vitro
COE Program (A-1) and a Grant-in-Aid for Scientific Research, both
culture. (A) PCR reaction with T. gondii DNA. (B) LAMP reaction with T. gondii DNA.
Lanes 1–7, 10 ng, 1 ng, 100 pg, 10 pg, 1 pg, 100 fg, 10 fg of DNA. Lane (M), 100 bp or from the Ministry of Education, Culture, Sports, Science, and Tech-
1 kbp DNA ladder. nology of Japan.
50 H. Zhang et al. / Experimental Parasitology 122 (2009) 47–50

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