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CELL MEMBRANE
(Proliferation/Differentiation) (Stress Responses)
ERK/MAPK JNK/SAPK p38/HOG
Kinase Pathway Pathway Pathway
Tyrosine
Kinases
Grb/SOS
STE20p-related kinases
PAKs
Y P
T P S P X P
MEKK Raf MEKK1-3 TAK1
S P T P X P
ERK1 T P T P p38/HOG T P
MAPK E JNK/SAPK P G
ERK2 Y P Y P ERK6 Y P
Figure 7.1. Activation of different MAPK signaling cascades by different extracellular stimuli. The ERK, JNK and p38 cascades all contain
the same series of three kinases. A MEK Kinase (MEKK) phosphorylates and activates a MAP Kinase Kinase (MEK), then MEK phosphorylates
and activates a MAP Kinase (MAPK).
a variety of molecules, such as Akt Kinase (also called PKB) subsequent activation of Akt (Rameh and Cantley, 1999).
via the pleckstrin homology (PH) domains of these Akt is a serine/threonine kinase that phosphorylates many
downstream targets (Cooray, 2004). Interaction of PIP3 with different target proteins. Many pro-apoptotic proteins are
Akt allows phosphorylation of Akt by PDK 1 and substrates of Akt that are inactivated by Akt
3897MA11_2A
Beetle Luciferin Oxyluciferin
Figure 7.2. The luciferase reaction. Mono-oxygenation of luciferin is catalyzed by luciferase in the presence of Mg2+, ATP and molecular
oxygen and produces one photon of light per turnover.
RLU
is mixed and luminescence read. The luminescence is
directly proportional to the ATP present in the kinase 100,000
reaction, and kinase activity is inversely correlated with
luminescent output.
50,000
The Kinase-Glo® Luminescent Kinase Assay (Cat.# V6711)
and the Kinase-Glo® Plus Luminescent Kinase Assay (Cat.# 0
V3771) can be used with virtually any kinase and substrate
0
8
16
24
32
40
48
56
64
72
80
88
96
combination. The Kinase-Glo® Assay is extremely sensitive Well #
and is linear from 0 to 10µM ATP. It routinely provides
Z´-factor values greater than 0.8 in both 96-well and B.
384-well formats (Figure 7.3). Z´-factor is a statistical 250,000
measure of assay dynamic range and variability; a Z´-factor
greater than 0.5 is indicative of a robust assay (Zhang et al. 200,000
1999).
We have demonstrated the utility of the Kinase-Glo® Assay 150,000
RLU
3929TB01_3A
0
24
48
72
96
0
4
8
2
6
0
4
8
2
6
0
4
12
14
16
19
21
24
26
28
31
33
36
kinase inhibition (Somberg et al. 2003). The same six wells 38
also showed detectable kinase inhibition when we tested Well #
the Kinase-Glo® Assay in low-volume 384 and 1536-well Figure 7.3. Determining Z´-factor for the Kinase-Glo® Assay.
formats (Goueli et al. 2004b; Figure 7.4). The Kinase-Glo® Panel A. The reaction was performed using 0.25 units/well PKA
Assay can also be used to determine IC50 values for kinase (solid circles) or no PKA (open circles) in 100µl volume. PKA was
diluted in 50µl kinase reaction buffer (40mM Tris [pH 7.5], 20mM
inhibitors. The IC50 values for one of the six hits from the
MgCl2 and 0.1mg/ml BSA), containing 5µM Kemptide Substrate
LOPAC library were determined using the Kinase-Glo® (Cat.# V5161) and 1µM ATP. The kinase reaction was run for 20
Assay. The Kinase-Glo® Assay gave values similar to values minutes at room temperature. Panel B. The 384-well plate assay
reported in the literature, further establishing the utility of was performed using 0.05 units/well (solid circles) or no PKA
the Kinase-Glo® Assay for high-throughput screening (open circles) in 20µl volume. Solid lines indicate mean, and dotted
(Goueli et al. 2004b). lines indicate ± 3 S.D. Z´-factor values were ~0.8 in both formats.
80,000
60,000
40,000
20,000
0
0 16 32 48 64 80 96
Kinase-Glo™ Kinase-Glo™
Substrate Buffer
Well Location
B.
140,000 Uninhibited
120,000 Inhibited
100,000 No Compound Kinase-Glo™
RLU
80,000 Reagent
60,000
40,000
20,000
0 Add to completed
0 16 32 48 64 80 96
4740MA
kinase reaction.
Well Location
Figure 7.4. Compound screen using Plate 6 of the LOPAC
(Sigma-RBI) performed in LV384- (Panel A) and 1536-well (Panel
B) formats. Compounds were screened at 10µM. See Goueli et al.
Mixer
2004a (www.promega.com/cnotes/cn010/cn010_20.htm) for percent
inhibition of compounds that inhibited kinase activity.
3899MA11_2A
competitive and noncompetitive inhibitors. Because the
concentration of ATP in cells is fairly high, inhibitors of
Luminometer
protein kinases that are not ATP-competitive are more
desirable as therapeutic agents than ATP-competitive kinase Figure 7.5. Schematic diagram of the Kinase Glo® Assay protocol.
inhibitors. Because the catalytic domains and active sites
of protein kinases have been evolutionarily conserved, Additional Resources for Kinase-Glo® and Kinase-Glo®
inhibitors that are not only ATP non-competitive, but also Plus Luminescent Kinase Assays
selective toward the target kinase are most desireable. The
Technical Bulletins and Manuals
Kinase-Glo® Plus Assay is optimized to work at ATP
TB318 Kinase-Glo® Luminescent Kinase Assay
concentrations that more closely reflect cellular ATP
concentrations and is linear up to 100µM ATP. (www.promega.com/tbs/tb318/tb318.html)
TB343 Kinase-Glo® Plus Luminescent Kinase Assay
Materials Required:
(www.promega.com/tbs/tb343/tb343.html)
• Kinase-Glo® Assay System (Cat.# V6711, V6712, V6713,
Promega Publications
V6714) or Kinase-Glo® Plus Assay System (Cat.# V3771,
CN011 Citation Note: Measuring LPS-induced
V3772, V3773, V3774 ) and Protocol (Technical Bulletin
PKC activity in U937 cells
#TB318 (www.promega.com/tbs/tb318/tb318.html) or
(www.promega.com
#TB343 (www.promega.com/tbs/tb343/tb343.html)).
/cnotes/cn011/cn011_17.htm)
• solid white multiwell plates
• multichannel pipet or automated pipetting station CN010 High-throughput screening using a
• plate shaker universal luminescent kinase assay
• luminometer capable of reading multiwell plates (www.promega.com
• ATP /cnotes/cn010/cn010_20.htm)
• appropriate kinase substrate CN005 Kinase-Glo® Assay: Detect virtually any
• appropriate kinase reaction buffer kinase
(www.promega.com
/cnotes/cn005/cn005_05.htm)
100,000
Nonphosphorylated Substrate Phosphorylated Substrate
90,000
80,000
70,000
+ Protease 60,000 + Protease
FLU
50,000
40,000
R110 R110
30,000
20,000
10,000
0
0 10 20 30 40 50 60 70 80 90 100
Fluorescent Nonfluorescent
3876MB
50M ATP
8,000 temperature (20 minutes for PKA Assay, 60 minutes
6,000
EC50 ~ 0.5mU
(~1.38ng) for Src-Family Kinase Assay).
4,000
2,000 4. Dilute Protease Reagent in 1X Termination Buffer A.
0
–2,000 5. Mix plate and incubate at room temperature (30 minutes
–2 –1 0 1 2
for PKA Assay, 60 minutes for Src-Family Kinase
Log10 Lck (mU/well) Assay).
2045TA01_8A
available as a sheet containing 96 numbered and partially
cut squares. This format is used in the SignaTECT® Kinase
Assay Systems. The SAM2® Membrane is also available as
Figure 7.9. The SAM2® 96 Biotin Capture Plate.
a 7.6 × 10.9cm solid sheet, which can be used for
high-throughput applications. The membrane can be
analyzed by autoradiography, PhosphofImager® analysis, Additional Resources for SAM2® Membranes
or scintillation counting. Technical Bulletins and Manuals
TB547 SAM2® Biotin Capture Membrane Technical
Bulletin
(www.promega.com/tbs/tb547/tb547.html)
TB249 SAM2® 96 Biotin Capture Plate Technical
Bulletin
(www.promega.com/tbs/tb249/tb249.html)
Promega Publications
CN005 From one to 9,000 samples: Using
high-density streptavidin-coated
membranes for kinase detection
(www.promega.com
/cnotes/cn005/cn005_09.htm)
2044TA01_8A
Citations
Xuei, X. et al. (2003) Use of SAM2® Biotin Capture
Figure 7.8. SAM2® Biotin Capture Membrane shown as a 7.6 × Membrane in microarrayed compound screening (µARCS)
10.9cm sheet (top) and in a 96-square format (bottom). format for nucleic acid polymerization assays J. Biol. Mol.
Screening 8, 273–82.
PO4
B. SignaTECT® Protein Kinase Assay Systems
Biotin–(C)6–XXXX(S/T/Y)XXXX
The SignaTECT® Protein Kinase Assay Systems use Capture the biotinylated
biotinylated peptide substrates in conjunction with the peptide substrate by
streptavidin-coated SAM2® Biotin Capture Membrane. The spotting reactions on
individual squares on
binding of biotin to the streptavidin is rapid and strong, the capture membrane.
and the association is unaffected by rigorous washing
procedures, denaturing agents, wide extremes in pH, PO4
temperature and salt concentration. High signal-to-noise SAM2® Biotin Biotin–(C)6–XXXX(S/T/Y)XXXX
ratios are generated even with complex samples, while the Capture
Membrane
high substrate capacity allows optimum reaction kinetics. Wash membrane to
The systems can be used to measure protein kinase activities remove unbound
Reaction reaction components.
using low femtomole levels of purified enzyme or crude Components
cellular extracts. SignaTECT® Assays are available to
Quantitate
measure protein tyrosine kinases (Cat.# V6480), cdc2 kinase
• Scintillation counter
(Cat.# V6430), cAMP-dependent protein kinase (Cat.# • Phosphorimaging system
V7480), protein kinase C (Cat.# V7470), DNA-dependent • Autoradiography
protein kinase (Cat.# V7870) and calmodulin-dependent
Figure 7.10. The SignaTECT® Protein Kinase Assay protocol.
protein kinase (Cat.# V8161).
As outlined in Figure 7.10, the assay steps and analysis of
results are straightforward and require only common
laboratory equipment. Following phosphorylation and
binding of the biotinylated substrate to the numbered and
partially cut squares of SAM2® Biotin Capture Membrane,
unincorporated [γ-32P]ATP is removed by a simple washing
procedure. This procedure also removes nonbiotinylated
proteins that have been phosphorylated by other kinases
in the sample. The bound, labeled substrate is then
quantitated by scintillation counting or PhosphorImager®
analysis. Typical results generated using the SignaTECT®
Assays are presented in Figure 7.11.
20 (www.promega.com
/pnotes/58/5189d/5189d.html)
15 PN059 Detection and quantitation of protein
tyrosine kinases
2.4 (www.promega.com
10
1.6
/pnotes/59/5644a/5644a.html)
PN063 SignaTECT® DNA-Dependent Protein
5 0.8
Kinase Assay System
0 (www.promega.com
0 40 80 120
0 /pnotes/63/8581_07/promega.html)
0 200 400 600 800 1,000 PN076 Tools to study the activation of CaM KII
in neuronal functions
EGFR (fmol)
(www.promega.com
Figure 7.11. Linear detection of EGFR kinase activity with the /pnotes/76/8840_06/8840_06.html)
SignaTECT® PTK Assay System. EGFR (Cat.# V5551) activity was
BR095 Signal Transduction Resource
measured in the presence of PTK Biotinylated Peptide Substrate
(www.promega.com
1 or PTK Biotinylated Peptide Substrate 2, provided with the
/guides/sigtrans_guide/default.htm)
SignaTECT® PTK System (Cat.# V6480). Inset: enlargement of the
data using 120fmol of EGFR. Citations
Zhang, L. et al. (2004) A transforming growth factor
beta-induced Smad3/Smad4 complex directly activates
Additional Resources for the SignaTect® Kinase Assay
protein kinase A. Mol. Cel Biol. 24, 2169–80.
Systems
These authors investigated the possible interaction between
Technical Bulletins and Manuals
TGFβ and PKA signaling pathways using the SignaTECT®
TB211 SignaTECT® Protein Tyrosine Kinase (PTK) cAMP-Dependent Protein Kinase (PKA) Assay System.
Assay System Technical Bulletin PubMed Number: 14966294
(www.promega.com/tbs/tb211/tb211.html)
TB227 SignaTECT® cdc2 Protein Kinase Assay C. Other Kinase Assay Formats (non-radioactive)
System Technical Bulletin
The PepTag® Protein Kinase Assays are fast and
(www.promega.com/tbs/tb227/tb227.html)
quantitative non-radioactive alternatives to
TB241 SignaTECT® cAMP-Dependent Protein [γ-32P]ATP-based assays for measuring protein kinase C
Kinase Assay System Technical Bulletin (Cat.# V5330) and cAMP-dependent protein kinase (Cat.#
(www.promega.com/tbs/tb241/tb241.html) V5340) activity. The assays use fluorescently-tagged peptide
TB242 SignaTECT® Protein Kinase C (PKC) Assay substrates with a net positive charge. Phosphorylation
System Technical Bulletin changes the charge of the peptide to a net negative, which
(www.promega.com/tbs/tb242/tb242.html) influences the migration of the peptide in an agarose gel.
TB250 SignaTECT® DNA-Dependent Protein Kinase This is the basis for detecting changes in phosphorylation
Assay System Technical Bulletin via a rapid, 15-minute agarose gel separation (Figure 7.12).
(www.promega.com/tbs/tb250/tb250.html) General PepTag® Assay Protocol
TB279 SignaTECT® Calcium/Calmodulin-Dependent Materials Required:
Protein Kinase (CaM KII) Assay System • PepTag® Non-Radioactive PKC Assay (Cat.# V5330) or
Technical Bulletin PepTag® Non-Radioactive cAMP-Dependent Protein
(www.promega.com/tbs/tb279/tb279.html) Kinase Assay (Cat.# V5340) and protocol (#TB132
Promega Publications (www.promega.com/tbs/tb132/tb132.html))
CN001 Store operated calcium entry activates at • PKA or PKC dilution buffer
the GVBD stage of Xenopus meiosis • horizontal agarose gel apparatus
(www.promega.com • glycerol, 80%
/cnotes/cn001/cn001_12.htm) • Tris-HCl, 50mM (pH 8.0)
• agarose, 0.8% in 50mM Tris-HCl (pH 8.0)
• probe sonicator
Block nitrocellulose membrane with Block PVDF membrane with PVDF Buffer
TBS/1% BSA for 1 hour (37˚C) or for 1 hour (37˚C) or overnight (4˚C).
overnight (4˚C).
Apply Anti-ACTIVE pAb diluted with Apply Anti-ACTIVE pAb diluted with
TBST/0.1% BSA and incubate 2 hours at PVDF Buffer and incubate 2 hours at
room temperature with agitation. room temperature with agitation.
Wash membrane 3 times with 75ml Wash membrane 3 times with 75ml
of TBST (15 minutes each), decant of PVDF Buffer (15 minutes each),
after each wash. decant after each wash.
Permeabilize the
cells with –20° C
methanol for Incubate with diluted
10 minutes. secondary antibody
for 90 minutes at
room temperature.
Additional Resources for LY 294002 Additional Resources for InCELLect® AKAP St-Ht31
Inhibitor Peptide
Promega Publications
Promega Publications
CN001 Frequently asked questions: Kinase
inhibitors and activators PN075 InCELLect® cell-permeable, stearated
(www.promega.com peptides to probe cAMP-dependent
/cnotes/cn001/cn001_10.htm) protein kinase-mediated cellular signaling
reactions in vivo.
BR095 Signal Transduction Resource
(www.promega.com
(www.promega.com
/pnotes/75/8554_29/8554_29.html)
/guides/sigtrans_guide/default.htm)
Citations
Yamaguchi, K. et al. (2004) Identification of nonsteroidal
anti-inflammatory drug-activated gene (NAG-1) as a novel,
Inhibitor 60,000
Z´ = 0.85
Promega Publications 40,000
BR095 Signal Transduction Resource
20,000
(www.promega.com
/guides/sigtrans_guide/default.htm) 0
4163TB09_3A
FLU
50,000
40,000
R110 R110
30,000
20,000
10,000
0
0 10 20 30 40 50 60 70 80 90 100
Fluorescent Nonfluorescent
3876MB
Percent Phosphorylated Peptide
Figure 7.15. Schematic and graph demonstrating that Rhodamine 110 is essentially nonfluorescent in the bisamide form and that the
presence of a phosphorylated amino acid (dark circle) blocks the removal of amino acids by the protease. The graph shows the average
FLU obtained after a 30-minute protease reagent digestion using mixtures of nonphosphorylated R1110 PKA Substrate and phosphorylated
R110 PKA Substrate as indicated (n = 6).
Dudley, D.T. et al. (1995) A synthetic inhibitor of the Shaeffer, H.J. and Weber, M.J. (1999) Mitogen-activated protein
mitogen-activated protein kinase cascade. Proc. Natl. Acad. Sci. kinases: Specific messages from ubiquitous messengers. Mol. Cell
USA 92, 7686–9. Biol. 19, 2435–44.
Eicholtz, T. et al. (1993) A myristoylated psuedosubstrate peptide, Shears, S.B. (2004) How versatile are inositol phosphate kinases?
a novel protein kinase C inhibitor. J. Biol. Chem. 268, 1982–6. Biochem. J. 377, 265–80.
Ellinger-Ziegelbauer, H. et al. (1997) Direct activation of the Sliva, D. (2004) Signaling pathways responsible for cancer cell
stress-activated protein kinase (SAPK) and extracellular invasion as targets for cancer therapy. Curr. Can. Drug Targets 4,
signal-regulated protein kinase (ERK) pathways by an inducible 327–36.
mitogen-activated protein kinase/ERK kinase kinase (MEKK) Somberg, R. et al. (2003) Kinase-Glo® Luminescent Kinase Assay:
derivative. J. Biol. Chem. 272, 2668–74. Detect virtually any kinase. Cell Notes 5, 5–8.
Favata, M. et al. (1998) Identification of a novel inhibitor of Tolwinski, N.S. et al. (1999) Nuclear localization of
mitogen-activated protein kinase kinase. J. Biol. Chem. 273, mitogen-activated protein kinase kinase (MKK 1) is promoted by
18623–32. serum stimulation and G2-M progression. J. Biol. Chem. 274,
French, K.J. et al. (2003) Discovery and evaluation of inhibitors of 6168–74.
human sphingosine kinase. Can. Res. 63, 5962–9. van der Geer, P. et al. (1994) Receptor protein tyrosine kinases and
Fruman, D.A. et al. (1998) Phosphoinositide kinases. Annu. Rev. their signal transduction pathways. Ann. Rev. Cell Biol. 10, 251–5.
Bioch. 67, 481–507. Vanhaesebroeck, B. et al. (2001) Synthesis and function of
Goueli, S.A. et al. (2004b) Assay protein tyrosine kinase and protein 3-phosphorylated inositol lipids. Annu. Rev. Biochem. 70, 535–602.
tyrosine phosphatase activity in a homogeneous, non-radioactive Zhang, J. et al. (1995) Activity of the MAP kinase ERK 2 is controlled
high-throughput format. Cell Notes 8, 15–20. by a flexible surface loop. Structure 3, 299–307.
Goueli, S.A. et al. (1998) U0126: A novel, selective and potent Zhang, J.H. et al. (1999) A simple statistical parameter for use in
inhibitor of MAP kinase kinase (MEK). Promega Notes 69, 6–8. evaluation and validation of high-throughput screening assays. J.
Goueli, S.A. et al. (2004a) High-throughput kinase screening using Biomol. Screening 4, 67–73.
a universal, luminescent kinase assay. Cell Notes 10, 20–23.
Anti-ACTIVE,InCELLect, Kinase-Glo, PepTag, ProFluor, SAM2 and
Grimsby, J. et al. (2003) Allosteric activators of glucokinase: SignaTECT are registered trademarks of Promega Corporation. Ultra-Glo
is a trademark of Promega Corporation.
Potential role in diabetes therapy. Science 301, 370–3.
Cy. PhosphorImager and Sephadex are registered trademarks of Amersham
Hunter, T. (1995) Protein kinases and phosphatases: The yin and Biosciences, Ltd. GraphPad Prism is a registered trademark of GraphPad
Software, Inc. LabTek is a registered trademark of Nagle Nunc International.
yang of protein phosphorylation and signaling. Cell 80, 225–36. Micro-Shaker is a registered trademark of Dynex Technologies, Inc.
Kang, S. et al. (2005) Phosphatidylinositol 3-kinase mutations Products may be covered by pending or issued patents or may have certain
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