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SIGNALING
A CONTINUATION REPORT TO MS. BARAGONA’S
REPORT
10/14/2023
CONTENT
1 2 3 4 5 6 7 8
Signal Receptors Propagation of the Binding Initiates a Methods of A Single Cell May Protein Cytosolic
Transduction Signal Signaling Pathway Intracellular Require Hundreds Phosphatases Turn Concentration Of
Signaling Of Different Off Signal- Ca2+ can Be
Protein Kinases transduction Altered
Pathways
1 2 3
Explain how the Recognize the role of Evaluate the role of
binding of a ligand phosphorylation in the second messengers in
initiates signal transmission of signal transmission
transduction throughout intracellular signals
a cell
CELL
protein phosphorylation is catalyzed by protein kinases,
ultimately resulting in a cellular response. Proteins responsible
for detecting stimuli are generally termed receptors, although in
SIGNALING
some cases the term sensor is used. The changes elicited by
ligand binding (or signal sensing) in a receptor give rise to a
biochemical cascade, which is a chain of biochemical events
known as a signaling pathway.
A CONTINUATION REPORT TO MS. BARAGONA’S
REPORT
CELL
extracellular cues, such as the presence of EGF, to
intracellular events.
• Signals that reach the central nervous system are
SIGNALING
classified as senses, transmitted from neuron to neuron
in a process called synaptic transmission.
CELL
Most ligands are soluble molecules from
the extracellular medium which bind to
cell surface receptors. These include
SIGNALING
growth factors, cytokines and
neurotransmitters.
A growth factor is a naturally occurring
substance capable of stimulating
A CONTINUATION REPORT TO MS. BARAGONA’S
cell proliferation, wound healing, and
REPORT
occasionally cellular differentiation.
Usually it is a secreted protein or a
steroid hormone. PREPARED BY FARHANA 3D Medical animation
M. SARIP BIO 281still showing signal
transduction.
Cytokines are a broad and loose category of small
proteins important in cell signaling. Due to their size,
cytokines cannot cross the lipid bilayer of cells to enter
the cytoplasm and therefore typically exert their functions
by interacting with specific cytokine receptors on the target
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cell surface.
SIGNALING
paracrine and endocrine signaling as
immunomodulating agents.
CELL
This form of sensory transduction is responsible for a
number of senses and physiological processes in the
SIGNALING
body, including proprioception, touch,balance, and
hearing.
CELL
Cellular and systemic control of osmotic pressure (the
difference in osmolarity between the cytosol and the
SIGNALING
extracellular medium) is critical for homeostasis.
Light CELL
SIGNALING
The sensing of temperature in cells is known as thermoception and
is primarily mediated by transient receptor potential channels.
CELL
most receptors. They span the
plasma membrane of the cell, with one part of
the receptor on the outside of the cell and the
other on the inside.
CELL
coupled to the receptor; the G protein exists as a heterotrimer
consisting of Gα, Gβ, and Gγ subunits (conserved signal
transduction mechanism in eukaryotes).
SIGNALING
• once the GPCR recognizes a ligand, the conformation of the receptor
changes to activate the G protein, causing Gα to bind a molecule of
GTP and dissociate from the other two G-protein subunits.
A CONTINUATION REPORT TO MS. BARAGONA’S
• dissociation exposes sites on the subunits that can interact with other
REPORT
molecules. The activated G protein subunits detach from the receptor
and initiate signaling from many downstream effector proteins
PREPARED BY FARHANA M. SARIP BIO 281
• the latter permitting the release of second messenger molecules
G PROTEIN-COUPLED RECEPTORS
In the case of G protein-coupled receptors, the conformation
change exposes a binding site for a G-protein. The G-protein
CELL
(named for the GDP and GTP molecules that bind to it) is
bound to the inner membrane of the cell and consists of
three subunits: alpha, beta and gamma. The G-protein is
known as the “transducer”.
SIGNALING
A prime example of GPCRs in physiology is their well-
known involvement in the neurohumoral regulation of heart
contractility. Upon sympathetic activation, epinephrine and
norepinephrine Abind to β-adrenergic
CONTINUATION receptors
REPORT (βARs) on
TO MS. BARAGONA’S
the surface of REPORT
cardiomyocytes, where they exert positive
inotropic and chronotropic effects.
PREPARED BY FARHANA M. SARIP BIO 281
CELL
SIGNALING
A CONTINUATION REPORT TO MS. BARAGONA’S
REPORT
CELL
an intracellular kinase domain and an extracellular domain that
binds ligands.
SIGNALING
plasma membrane; the dimer is stabilized by ligands binding to the receptor.
CELL
families, referred to collectively as small G proteins. They act as
molecular switches usually tethered to membranes by isoprenyl
groups linked to their carboxyl ends.
SIGNALING
Upon activation, they assign proteins to specific membrane
subdomains where they participate in signaling. Activated RTKs in
turn activate small G proteins that activate
A CONTINUATION
guanine nucleotide exchange REPORT TO MS.
factors suchBARAGONA’S
as SOS1.
REPORT
Integrins
Produced by a wide variety of cells; they play a role in cell
CELL
attachment to other cells and the extracellular matrix and in the
transduction of signals from extracellular matrix components
SIGNALING
integrins changes the protein's conformation,
clustering it at the cell membrane to initiate
signal transduction.
A CONTINUATION REPORT TO MS. BARAGONA’S
• IntegrinsREPORT
lack kinase activity; hence, integrin-
mediated signal transduction is achieved
through a variety of intracellular protein
PREPARED BY FARHANA M. SARIP BIO 281
kinases and adaptor molecules, the main
coordinator being integrin-linked kinase.
RECEPTORS
Toll-like receptors
When activated, toll-like receptors (TLRs) take adapter molecules
within the cytoplasm of cells in order to propagate a signal.
CELL
Four adaptor molecules: Myd88, TIRAP,
TRIF, and TRAM. These adapters activate
SIGNALING
other intracellular molecules such as IRAK1,
IRAK4, TBK1, and IKKi that amplify the
signal, eventually leading to the induction or
suppression of genes that cause certain
A CONTINUATION REPORT TO MS. BARAGONA’S
responses. REPORT
CELL
which ions relaying signals can pass.
SIGNALING
A CONTINUATION REPORT TO MS. BARAGONA’S
REPORT
CELL
respective areas.
To initiate signal transduction, the ligand
must pass through the plasma membrane
SIGNALING
by passive diffusion. On binding with the
receptor, the ligands pass through the
nuclear membrane into the nucleus,
altering gene expression.
A CONTINUATION REPORT TO MS. BARAGONA’S
REPORT receptors attach to the DNA at
Activated nuclear
receptor-specific hormone-responsive element (HRE)
sequences, located in the promoter
PREPARED BYregion of theM.
FARHANA genes
SARIP BIO 281
activated by the hormone-receptor complex. Due to
their enabling gene transcription, they are alternatively
called inductors of gene expression.
Recall:
What Kind of Signals Do Cells Receive?
In multicellular organisms, growth factors, hormones, neurotransmitters, and
extracellular matrix components are some of the many types of chemical
CELL
signals cells use.
SIGNALING
muscle cells.
CELL
SIGNALING
A CONTINUATION REPORT TO MS. BARAGONA’S
REPORT
CELL
SIGNALINGAn example of ion channel activation
CELL
when adenylyl cyclase, a membrane- bound
enzyme, is activated by G-protein molecules
associated with the adrenergic receptor.
Adenylyl cyclase creates multiple cyclic AMP
SIGNALING
molecules, which fan out and activate protein
kinases (PKA, in this example). Protein
kinases can enter the nucleus and affect
transcription. A CONTINUATION REPORT TO MS. BARAGONA’S
REPORT
CELL
with cell-surface receptors because internal receptors are able to interact
directly with DNA in the nucleus to initiate protein synthesis.
SIGNALING
A CONTINUATION REPORT TO MS. BARAGONA’S
REPORT
CELL
SIGNALING
• binding of the ligand causes dimerization of the receptor;
two receptors bind to each
A CONTINUATION other
REPORT TOto form
MS. a stable complex
BARAGONA’S
calledREPORT
a dimer
• a dimer is a chemical compound formed when two
PREPARED
molecules join together; BYtheir
enables FARHANA M. SARIP
intracellular domainsBIO 281
to come into close contact and activate each other.
Binding Initiates a Signaling Pathway
After the ligand binds to the cell-surface receptor, the activation of the
receptor’s intracellular components sets off a chain of events that is
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called a signaling pathway or a signaling cascade. In a signaling
pathway, second messengers, enzymes, and activated proteins interact
with specific proteins, which are in turn activated in a chain reaction
SIGNALING
that eventually leads to a change in the cell’s environment (Figure 1).
Events in the cascade:
• upstream events interactions that occur before a certain point
• downstream events REPORT
A CONTINUATION events after
TO MS.that point
BARAGONA’S
REPORT
Signal integration of the pathways; signals from two or more
different cell-surface receptors merge to activate the same response in
PREPARED BY FARHANA M. SARIP BIO 281
the cell.
• ensure that multiple external requirements are met before a
cell commits to a specific response
CELL
SIGNALING
A CONTINUATION REPORT TO MS. BARAGONA’S
REPORT
Figure 1. The epidermal growth factor (EGF) receptor (EGFR) is a receptor tyrosine
kinase involved in the regulation of cell growth, wound healing, and tissue repair. When
PREPARED BY FARHANA M. SARIP BIO 281
EGF binds to the EGFR, a cascade of downstream events causes the cell to grow and
divide. If EGFR is activated at inappropriate times, uncontrolled cell growth (cancer)
may occur.
CELL
SIGNALING
A CONTINUATION REPORT TO MS. BARAGONA’S
REPORT
CELL
SIGNALING
A CONTINUATION REPORT TO MS. BARAGONA’S
REPORT
CELL
• phosphate can be added to a nucleotide such as GMP to form GDP or
GTP
SIGNALING
• often added to serine, threonine, and tyrosine residues of proteins,
where they replace the hydroxyl group of the amino acid (Figure 2)
CELL
residues often activates enzymes.
Phosphorylation of tyrosine residues can either
affect the activity of an enzyme or create a
SIGNALING
binding site that interacts with downstream
components in the signaling cascade.
Phosphorylation may activate or inactivate
enzymes, and the reversal of phosphorylation,
dephosphorylation A by a phosphatase,
CONTINUATION will
REPORT TO MS. BARAGONA’S
reverse the effect. REPORT
PREPARED BY FARHANA
Figure 2.M.
In SARIP BIO 281
protein phosphorylation, a
phosphate group (PO4 ) is added to
−3
CELL
Note:
SIGNALING
reach the cell from the extracellular fluid and bind to their
specific receptors.
Second messengers
A CONTINUATION REPORT TO are the substances that enter the
MS. BARAGONA’S
REPORT
cytoplasm and act within the cell to trigger a response.In
essence, second messengers serve as chemical relays
from the plasma membrane
PREPARED BY FARHANA to theM.
cytoplasm,
SARIP BIOthus
281
carrying out intracellular signal transduction.
Calcium
Calcium ion is a widely used second messenger. The free concentration of
calcium ions (Ca2+) within a cell is very low because ion pumps in the plasma
membrane continuously use adenosine-5′-triphosphate (ATP) to remove it.
CELL
• The release of calcium ions from the endoplasmic reticulum into the cytosol results
in its binding to signaling proteins that are then activated; it is then sequestered in
the smooth endoplasmic reticulum and the mitochondria.
SIGNALING
• Two combined receptor/ion channel proteins control the transport of calcium: the
InsP3-receptor that transports calcium upon interaction with inositol triphosphate
on its cytosolic side; and the ryanodine receptor similar to the InsP3 receptor but
A CONTINUATION REPORT TO MS. BARAGONA’S
having a feedback mechanism that releases more calcium upon binding with it.
REPORT
CELL
SIGNALING
A CONTINUATION REPORT TO MS. BARAGONA’S
REPORT
CELL
through activation of soluble guanylyl cyclase, which when activated
produces another second messenger, cGMP.
SIGNALING
A CONTINUATION REPORT TO MS. BARAGONA’S
REPORT
CELL
SIGNALING
A CONTINUATION REPORT TO MS. BARAGONA’S
REPORT
Synthesized by the enzyme adenylyl cyclase from ATP (Figure 3). The main
CELL
role of cAMP in cells is to bind to and activate an enzyme called cAMP-
dependent kinase (A-kinase).
SIGNALING
A-kinase regulates many vital metabolic pathways: It phosphorylates
serine and threonine residues of its target proteins, activating them in the
process.
A CONTINUATION REPORT TO MS. BARAGONA’S
REPORT
SIGNALING
products of the cleavage of PIP2 serve as
second messengers
Molecules
intermembrane space where they can reach and regulate
membrane-associated effector proteins.
• water-soluble molecules, such as cAMP, cGMP, IP3, and Ca2+, • nitric oxide (NO), carbon monoxide (CO) and hydrogen sulfide
that are located within the cytosol (H2S) which can diffuse both through cytosol and across cellular
membranes
START
Mechanisms Secondary Messenger Molecules
CELL
SIGNALING
A CONTINUATION REPORT TO MS. BARAGONA’S
General
REPORT Schematic of Second Messenger
Mechanism
CELL
Single cell requires thousands of kinases because kinases may
each phosphorylate a unique target, there are many different
pathways working at once inside.
SIGNALING
Protein kinases play a major role in cellular activation
processes. An important aspect of activation is the need to
provide stringent controls which
A CONTINUATION REPORTwill
TO allow for appropriate
MS. BARAGONA’S
enhancement and diminution of function. Protein kinase
REPORT
activities are regulated by interaction with other proteins.
PREPARED BY FARHANA M. SARIP BIO 281
Protein Phosphatases Turn Off Signal-
transduction Pathways
CELL
Protein phosphatases are enzymes that can rapidly remove
phosphate groups from proteins (dephosphorylation) and thus
SIGNALING
inactivate protein kinases. Protein phosphatases are the "off
switch" in the signal transduction pathway.
CELL
on the signal molecules that induce responses in their target
cells. Increasing the cytosolic concentration of Ca2+ causes
many responses in animal cells, including muscle cell
SIGNALING
contraction, secretion of certain substance, and cell division.
1 2
What Is Cellular Response? Major Pathways
Primary
multicellular organisms, must be able to communicate
and coordinate responses to maintain homeostasis in
the body. Cellular communication is complicated.
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CELLULAR RESPONSES
Gene activations and metabolism alterations are examples of cellular
responses to extracellular stimulation that require signal transduction.
CELL
SIGNALING
A CONTINUATION REPORT TO MS. BARAGONA’S
REPORT
CELL
For example, steroids act directly as transcription factor (gives
slow response, as transcription factor must bind DNA, which
needs to be transcribed. Produced mRNA needs to be translated,
SIGNALING
and the produced protein/peptide can undergo
posttranslational modification (PTM).
MAPK/ERK pathway
cAMP-dependent pathway
IP3/DAG pathway
Primary
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Major pathways
MAPK/ERK pathway
A pathway that couples intracellular responses to the binding
of growth factors to cell surface receptors. This pathway is
very complex and includes many protein components. In many
Primary
cell types, activation of this pathway promotes cell division,
and many forms of cancer are associated with aberrations in it.
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Major pathways
cAMP-dependent pathway
In humans, cAMP works by activating protein kinase A (PKA,
cAMP-dependent protein kinase) (see picture), and, thus,
further effects depend mainly on
Primary
cAMP-dependent protein kinase, which vary based on the type
of cell.
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Major pathways
IP3/DAG pathway
PLC cleaves the phospholipid
phosphatidylinositol 4,5-bisphosphate (PIP2), yielding
diacyl glycerol (DAG) and inositol 1,4,5-triphosphate (IP3).
Primary
DAG remains bound to the membrane, and IP3 is released as
a soluble structure into the cytosol.
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IP3 then diffuses through the cytosol to bind to IP3 receptors,
particular calcium channels in the endoplasmic reticulum
(ER). These channels are specific to calcium and allow the
passage of only calcium to move through. This causes the
Annualofrevenue
cytosolic concentration Calciumgrowth
to increase, causing a
cascade of intracellular changes and activity.
Gene expression, an example of a cellular response,
is the process of reading genes and creating protein
products. Not all genes are on all at once in any given cell,
Primary
and extracellular signals can cause changes that allow genes
to be turned on or off.
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LEARNING OBEJECTIVES
1 2 3
signal information is signal amplification is different types of cells
transduced into cellular accomplished in target may respond differently
responses in the cells to the same signal
cytoplasm and in the molecule
nucleus
Primary
• A ligand binds to a receptor, leading indirectly to activation of
adenylyl cyclase, which converts ATP to cAMP. cAMP binds to
protein kinase A and activates it, allowing PKA to phosphorylate
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downstream factors to produce a cellular response.
• Receptors transmit information from the extracellular environment
to the inside of the cell by changing shape or by joining with
another protein once a specific ligand binds to it.
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Signal Information Is Transduced Into Cellular
Responses In The Nucleus
Signal information is transduced into cellular responses in the
cytoplasm and in the nucleus with an initial signaling molecule, a
Primary
growth factor, triggers a phosphorylation cascade. Once
phosphorylated, the last kinase in the sequence enters the nucleus and
activates a gene-regulating protein, a transcription factor.
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Signal Amplification Is Accomplished
In Target Cells
Primary
Enzymes can catalyze the production of several signalling
molecules in a short time when activated and this can amplify
the signal received at the cell surface several fold.
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Different Types Of Cells May Respond Differently To The Same
Signal Molecule
Primary
cell surfaces. Nuclear envelope proteins vary from cell type to
cell type, and this means that cells respond to signaling
molecules differently. Different types of cells possess different
proteins.
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Presenter name
Farhana M. Sarip
Email address
THANK sarip.fm15@s.msumain.edu.ph
YOU!