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  • Data Pengamatan 1. Probe Pendek Kode Gen: NM - 000283.3 Nama Gen

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    Ari Oktavia
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    1. Three probes - short, medium, and long - were used to analyze the Homo sapiens phosphodiesterase 6B (PDE6B) gene. 2. The medium probe had the highest specificity, correctly identifying the PDE6B transcript variants 1 and 2 with 100% query score and showing the largest difference of 4 from the competitor. 3. In conclusion, the medium probe was determined to be the most specific probe for analyzing the PDE6B gene.

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    DATA PENGAMATAN

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    1. Three probes - short, medium, and long - were used to analyze the Homo sapiens phosphodiesterase 6B (PDE6B) gene. 2. The medium probe had the highest specificity, correctly identifying the PDE6B transcript variants 1 and 2 with 100% query score and showing the largest difference of 4 from the competitor. 3. In conclusion, the medium probe was determined to be the most specific probe for analyzing the PDE6B gene.

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    2 views2 pages

    Data Pengamatan 1. Probe Pendek Kode Gen: NM - 000283.3 Nama Gen

    Uploaded by

    Ari Oktavia
    1. Three probes - short, medium, and long - were used to analyze the Homo sapiens phosphodiesterase 6B (PDE6B) gene. 2. The medium probe had the highest specificity, correctly identifying the PDE6B transcript variants 1 and 2 with 100% query score and showing the largest difference of 4 from the competitor. 3. In conclusion, the medium probe was determined to be the most specific probe for analyzing the PDE6B gene.

    Copyright:

    © All Rights Reserved
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    of 2

    DATA PENGAMATAN

    1. Probe Pendek
    Kode gen : NM_000283.3
    Nama gen : Homo sapiens phosphodiesterase 6B (PDE6B), transcript variant 1,
    mRNA
    CDS : 54-2618 bp
    Probe : 54-246 bp (300 bp)
    No. Description Total. score Querry score
    1. Homo sapiens 555 100%
    phospodiesterase
    DB(PDE6B) transcript
    variant 2. mRNA
    2. Homo sapiens 555 100%
    phospodiesterase
    DB(PDE6B) transcript
    variant 1. mRNA
    Kompetitor
    1. Homo sapiens 555 100%
    chromosome.4
    GRCh38.p12 Primary
    Assembly

    2. Probe Sedang
    Kode gen : NM_000283.3
    Nama gen : Homo sapiens phosphodiesterase 6B (PDE6B), transcript variant 1,
    mRNA
    CDS : 54-2618 bp
    Probe : 246-354 bp (600 bp)
    No. Description Total. score Querry score
    1. Homo sapiens 1109 100%
    phospodiesterase
    DB(PDE6B) transcript
    variant 2. mRNA
    2. Homo sapiens 1109 100%
    phospodiesterase
    DB(PDE6B) transcript
    variant 1. mRNA
    Kompetitor
    1. Homo sapiens 1113 100%
    chromosome.4
    GRCh38.p12 Primary
    Assembly
    3. Probe Panjang
    Kode gen : NM_000283.3
    Nama gen : Homo sapiens phosphodiesterase 6B (PDE6B), transcript variant 1,
    mRNA
    CDS : 54-2618 bp
    Probe : 354-646 bp (1000 bp)
    No. Description Total.score Querry score
    1. Homo sapiens phospodiesterase 1847 100%
    DB(PDE6B) transcript variant 2.
    mRNA
    2. Homo sapiens phospodiesterase 1847 100%
    DB(PDE6B) transcript variant 1.
    mRNA
    3. Homo sapiens phospodiesterase 549 29%
    DB(PDE6B) transcript variant 5.
    mRNA
    4. Homo sapiens phospodiesterase 544 29%
    DB(PDE6B) transcript variant 4.
    mRNA
    5. Homo sapiens phospodiesterase 516 28%
    DB(PDE6B) transcript variant 3.
    mRNA
    Kompetitor
    1. Homo sapiens chromosome.4 1849 98%
    GRCh38.p12 Primary Assembly
    Kesimpulan : Dari ketiga probe, probe sedang adalah yang paling spesifik karena
    nilai selisih yang paling banyak yaitu 4.

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