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hydrocarbon molecules
A. I. S. Holm, H. A. B. Johansson, H. Cederquist, and H. Zettergren
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THE JOURNAL OF CHEMICAL PHYSICS 134, 044301 (2011)
We have performed density functional theory calculations for a range of neutral, singly, and mul-
tiply charged polycyclic aromatic hydrocarbons (PAHs), and their fragmentation products for H-,
H+ -, C2 H2 -, and C2 H+
2 -emissions. The adiabatic and vertical ionization energies follow linear de-
pendencies as functions of charge state for all five intact PAHs (naphthalene, biphenylene, an-
thracene, pyrene, and coronene). First estimates of the total ionization and fragmentation cross
sections in ion–PAH collisions display markedly different size dependencies for pericondensed and
catacondensed PAH species, reflecting differences in their first ionization energies. The dissociation
energies show that the PAHq+ -molecules are thermodynamically stable for q ≤ 2 (naphthalene,
biphenylene, and anthracene), q ≤ 3 (pyrene), and q ≤ 4 (coronene). PAHs in charge states above
these limits may also survive experimental time scales due to the presence of reaction barriers as de-
duced from explorations of the potential energy surface regions for H+ -emissions from all five PAHs
and for C2 H+2 -emission from naphthalene – the smallest PAH. © 2011 American Institute of Physics.
[doi:10.1063/1.3541252]
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044301-2 Holm et al. J. Chem. Phys. 134, 044301 (2011)
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044301-3 Dissociation and ionization of five PAHs J. Chem. Phys. 134, 044301 (2011)
TABLE I. Calculated first (IE1 ), second (IE2 ), and double ionization energies (IE1 + IE2 ), where the superscripts denote the adiabatic (a) and the vertical (v)
values. The cases when triplet states are lower in energy than the corresponding singlet states are denoted by superscript t (the corresponding energies for the
singlet states within parenthesis). The most recent experimental results for the first ionization energies (Ref. 45) and the double ionization energies (Ref. 46)
are shown for comparisons. All values are in eV.
describing electron transfer processes in keV ion- σtot -values to be higher when the actual collision geometries
collisions.50–54 The slope (B) is related to the capacitance are taken into account, since the electron may then be
(and radius in the case of a spherical cluster/molecule) and captured at larger distances from the center of the molecule
the intercept (A) is related to the surface work function due to its geometrical size and polarization effects.50, 51 For a
(i.e., the ionization energy for an object with large exten- highly charged projectile, the present much simpler approach
sion). The capacitance, in turn, is related to the molecular is, however, rather reasonable as the critical distances, R1 , for
polarizability and, may thus, be used to build more realistic electron removal are considerably larger than the dimensions
ion–molecule interaction potentials where polarization of the molecules.
effects are taken into account. This is rather straightforward The σtot -values as functions of the number of carbon
for collisions between (multiply) charged ions and spherical atoms n in PAH molecules Cn Hm are shown in Fig. 3. Here,
objects (as, e.g., the fullerenes) as the potential barrier we have used a projectile charge, q p = 20, and the verti-
experienced by the active electron only depends on the cal rather than the adiabatic ionization energies as these bet-
radial distance to the sphere center.50, 51 A similar approach ter represent the conditions when PAH monomers28, 29 and
using the present results for modeling ion-PAH collisions clusters30 are interacting with keV ions on subfemtosecond
would become more involved since the PAH orientation has timescales. The molecular structures may thus be regarded as
to be taken into account. However, we have chosen to use frozen during the interaction process. In addition, the first ion-
the classical over-the-barrier model in its simplest form,55 in ization energies for catacondensed tetracene (C18 H12 ), pen-
which the target molecule is assumed to be point formed, for tacene (C22 H14 ), and hexacene (C26 H16 ), and pericondensed
first estimates of the total ionization and fragmentation cross circumpyrene (C42 H16 ) and circumcoronene (C54 H18 ) were
1/2
sections as σtot = π R21 . Here, R1 = [2q p + 1]/IE1 is the extracted from single point calculations at the B3LYP/6-
critical distance for capturing the first electron. We expect the 311++G(2d,p) level using the structures from Ref. 48 op-
timized at the B3LYP/6-31+G* level. With these values
included in Fig. 3, it becomes clear that catacondensed PAHs
(naphthalene, anthracene, tetracene, pentacene, and hexac-
ene) have a much steeper trend compared to pericondensed
ones (pyrene, coronene, circumpyrene, and circumcoronene).
These results suggest different ionization and fragmentation
behaviors for catacondensed and pericondensed species, even
when they contain the same number of carbon atoms. This is
because the impact parameter regions for multiple electron
FIG. 3. The total ionization and fragmentation cross sections in keV ion-
PAH collisions (cf. text) as functions of the number of carbon atoms n in
FIG. 2. The adiabatic (upper panel) and the vertical ionization energies PAHs Cn Hm , calculated by means of the classical over-the-barrier model
(lower panel) as functions of the PAH charge state q for the catacondensed (Ref. 55) using the present vertical ionization energies (cf. text). The results
(closed symbols) and pericondensed (open symbols) PAHs considered in the for the pericondensed (open circles) and catacondensed PAH species (solid
present work. The solid curves are linear fits to ionization energy sequences. circles) display markedly different trends as functions of n.
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044301-4 Holm et al. J. Chem. Phys. 134, 044301 (2011)
B. Dissociation energies
Previous theoretical and experimental studies have un-
ambiguously shown that the lowest energy dissociation chan-
nels are single hydrogen (H)-loss and loss of one acetylene
molecule (C2 H2 ) from neutral and singly charged PAHs. As
the PAH charge state increases the loss of charged fragments
become important, mainly through the C2 H+ 2 -loss channel.
56
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044301-5 Dissociation and ionization of five PAHs J. Chem. Phys. 134, 044301 (2011)
FIG. 7. The fission barriers as functions of the charge state for proton emis-
sion from the five PAHs considered in the present work (solid symbols),
together with the corresponding fission barriers for C2 H+ 2 -emission from
napthalene (open squares). Lines are to guide the eye.
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044301-6 Holm et al. J. Chem. Phys. 134, 044301 (2011)
by highly charged ion impact29 are most likely metastable TABLE IV. The fitting parameters ( A and B) obtained from linear fits to
with lifetimes of microseconds or longer. These findings are the sequences of the adiabatic (IEqa + 1 = Aa + B a q) and the vertical (IEqv + 1
= Av + B v q) ionization energies. All values are in eV.
further supported by the present transition structure calcula-
tions revealing significant fission barriers for C2 H+ +
2 - and H - A B
emissions from multiply charged metastable PAHs. Naphthalene 7.65 ± 0.23v 5.83 ± 0.07v
The vertical and adiabatic ionization energies follow lin- 8.04 ± 0.21a 5.26 ± 0.07a
ear dependencies along the ionization sequences and may Biphenylene 7.33 ± 0.07v 5.39 ± 0.02v
serve as important model parameters, as illustrated by first 7.50 ± 0.37a 5.02 ± 0.12a
estimates of the total ionization and fragmentation cross sec- Anthracene 7.18 ± 0.19v 4.91 ± 0.06v
tions in keV ion–PAH collisions based on the classical over- 7.36 ± 0.35a 4.63 ± 0.11a
the-barrier model in its simplest form.55 These results show Pyrene 7.02 ± 0.18v 4.84 ± 0.04v
7.53 ± 0.32a 4.42 ± 0.08a
that electron transfer distances are markedly different for
Coronene 6.70 ± 0.30v 4.05 ± 0.06v
catacondensed and pericondensed species containing similar
7.15 ± 0.22a 3.81 ± 0.04a
number of carbon atoms, which will influence the relative
ionization yields and the energy deposited in the collisions, TABLE V. The adiabatic dissociation energies for losses of H, C2 H2 , H+ ,
and lead to clear differences in the ionization and fragmenta- and C2 H+ 2 from naphthalene (C10 H8 ), biphenylene (C12 H8 ), anthracene
tion behaviors for these two classes of PAH molecules. The (C14 H10 ), pyrene (C16 H10 ), and coronene (C24 H12 ). All values are in eV.
relative fragmentation yields for electron transfer collisions
q Pathway C10 H8 C12 H8 C14 H10 C16 H10 C24 H12
will be considerably smaller for cata- than for pericondensed
0 –H 4.7 4.7 4.7 4.7 4.7
PAHs.
–C2 H2 4.0 3.5 2.7 6.9 8.0
ACKNOWLEDGMENTS 1 –H 4.8 5.0 5.3 5.1 5.2
–C2 H2 4.6 4.3 3.3 6.4 7.3
We acknowledge generous financial support from the –H+ 10.5 11.1 11.3 11.3 11.4
Swedish Research Council, the ITS-LEIF Project (RII3 - –C2 H+ 7.4 7.5 6.9 11.0 12.3
2
026015), and the Danish Council for Independent Research
2 –H 4.5 5.1 5.0 5.0 4.7
| Natural Science. –C2 H2 4.5 5.8 4.4 5.7 6.8
–H+ 5.3 6.6 7.2 7.2 8.0
APPENDIX: IONIZATION AND DISSOCIATION –C2 H+
2 2.7 3.5 2.8 6.1 7.6
ENERGIES 3 –H 4.2 4.2 4.1 4.5 5.2
–C2 H2 6.2 7.1 5.2 6.8 7.9
–H+ −0.6 0.8 1.6 2.0 4.0
TABLE II. The vertical ionization energies for naphthalene C10 H8 , –C2 H+
2 −3.0 −1.0 −1.4 0.4 3.7
biphenylene C12 H8 , anthracene C14 H10 , pyrene C16 H10 , and coronene
4 –H 4.2 4.0 3.7 4.3 5.0
C24 H12 . All values are in eV.
–C2 H2 7.8 8.5 6.4 8.2 8.4
q C10 H8 C12 H8 C14 H10 C16 H10 C24 H12 –H+ −6.2 −5.2 −4.1 −3.0 0.5
0 7.95 7.42 7.14 7.20 7.11 –C2 H+
2 −6.6 −4.8 −5.4 −3.1 0.8
1 13.50 12.60 11.90 11.83 10.77 5 –H 4.2 4.1 4.1 4.4 4.4
2 18.90 18.12 17.18 16.64 14.76 –C2 H2 8.8 10.1 8.1 9.2 7.9
3 24.92 23.48 22.28 21.53 18.49 –H+ −11.4 −10.1 −8.5 −7.6 −4.2
4 30.91 28.80 26.54 26.08 23.08 –C2 H+
2 −10.2 −7.9 −8.2 −6.1 −3.2
5 37.09 34.35 31.73 31.60 27.05 6 –H 4.7 4.5 4.2 3.8 4.1
6 35.70 30.91 –C2 H2 11.6 12.9 10.4 10.5 7.7
7 41.21 35.88 –H+ −16.1 −14.3 −12.3 −12.2 −8.8
8 38.72 –C2 H+
2 −13.9 −10.7 −10.7 −9.8 −7.7
9 43.47 7 –H 4.3 4.7
–C2 H2 12.1 8.8
TABLE III. The adiabatic ionization energies for naphthalene C10 H8 , –H+ −16.4 −12.2
biphenylene C12 H8 , anthracene C14 H10 , pyrene C16 H10 , and coronene –C2 H+
2 −12.0 −11.0
C24 H12 . All values are in eV.
8 –H 4.9 4.5
q C10 H8 C12 H8 C14 H10 C16 H10 C24 H12 –C2 H2 14.1 9.7
0 7.86 7.29 7.09 7.13 7.00 –H+ −19.9 −15.7
1 13.19 12.11 11.71 11.61 10.81 –C2 H+
2 −14.5 −14.1
2 18.77 18.03 17.03 16.60 14.54 9 –H 4.9
3 24.03 23.09 21.87 21.17 18.38 –C2 H2 10.7
4 29.30 27.73 25.90 25.57 22.88 –H+ −19.3
5 33.95 32.05 30.05 30.26 26.45 –C2 H+
2 −16.5
6 33.78 30.38 10 –H 5.1
7 37.82 34.1 –C2 H2 11.9
8 37.43 –H+ −22.2
9 40.80 –C2 H+
2 −18.9
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044301-7 Dissociation and ionization of five PAHs J. Chem. Phys. 134, 044301 (2011)
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