BT203IU Bioinformatics

Assignment 4

Gene prediction

Due date: 21:00, 28 Oct. 2019

(Submission via email is acceptable)

Question 1: In the NCBI database, retrieve the nucleotide sequences NG011676. Report:

a. Gene name, database name.

- Gene name: Homo sapiens growth hormone 1 (GH1)

- Database name:
b. Number of exons and its position (the start and the end of each exon).

- Number of exons: 5 (5000..5072, 5333..5493, 5703..5822, 5915..6079,

6333..6636).

c. The start and the end of coding region (CDS)

- (5063..5072,5333..5493,5703..5822,5915..6079,6333..6530)

d. Accession number of protein from this gene and the length of polypeptide.
- Accession number of protein from this gene: 1.
- the length of polypeptide: 217 aa.