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Journal of Fluorescence

https://doi.org/10.1007/s10895-018-2217-4

ORIGINAL ARTICLE

Spectral Characteristics of Autofluorescence in Renal Tissue


and Methods for Reducing Fluorescence Background in Confocal Laser
Scanning Microscopy
Yang Zhang1 · Yang Wang1,2 · Wei‑Wei Cao2 · Ke‑Tao Ma1,2 · Wei Ji1 · Zi‑Wei Han1 · Jun‑Qiang Si1,2 · Li Li1,2

Received: 28 November 2017 / Accepted: 16 February 2018


© Springer Science+Business Media, LLC, part of Springer Nature 2018

Abstract
Significant autofluorescence (AF) of renal tissue is one of the major causes restricting the use of immunofluorescent staining.
This study aimed at controlling renal tissue AF and testing an effective method for optimizing specific signals. In the present
study, we observed emergence of strong AF in all renal cells under different fluorescent channels. Significant concentration-
dependent reduction in AF of kidney tissue was observed with the use of sodium borohydride ­(NaBH4) and Sudan black B
(SBB) alone (p < 0.05). Under maximum effective concentration, semi-quantitative analysis revealed that inhibitory effect of
SBB on AF was superior to that of ­NaBH4 (P < 0.01). When the two chemicals were combined, we observed that background
can be reduced, and specific staining can be optimized at optimum concentration. Intensity of renal tissue was examined by
confocal λ scanning, which showed that peaks were located at the range of approximately 480 − 590 nm and similar to those
of flavin and lipofuscin. These results indicated that combined use of ­NaBH4 and SBB, when targeted at different sources
of AF in renal tissue, is the most effective means of reducing background and preserving specificity of fluorescent labels. In
addition, this method does not interfere with various steps of immunofluorescence experiments.

Keywords  Autofluorescence of renal tissue · Immunofluorescence · Sudan black B · Sodium borohydride · Confocal λ
(lambda) scanning

Introduction increasing attention, researchers have observed that strong


fluorescence background in kidneys represents a well-recog-
Different from fluorescent signals obtained by adding exog- nized difficulty in immunofluorescence assays. Monitoring
enous markers, autofluorescence (AF) refers to the natural intensity and spectrum of AF is an effective way of assessing
fluorescence produced by cells, tissues and organisms when severity of renal tubular necrosis and detecting the degree
exposed to ultraviolet radiation and is an intrinsic character- of damage in ischemic kidneys [2–4]. The high background
istic of tissues and cells [1]. In recent years, as kidney AF caused by combination of AF and nonspecific antibodies
and application of laser confocal microscopy have gained acts as barrier to immunofluorescence analysis, concealing
or interfering with specific fluorescent signals and subse-
quently resulting in false positive results [5–7].
Yang Zhang and Yang Wang contributed equally to this work.
Generation of renal AF results from the interaction
* Jun‑Qiang Si between endogenous fluorophores and exogenous fac-
sijunqiang@shzu.edu.cn tors caused by tissue-processing techniques [8]. Several
* Li Li chemical treatments have been recently shown to reduce
lily7588@163.com intrinsic fluorescence of brain tissue [9], pancreatic tissue
1
[10], and enamel [7]. Intensity of tissue fluorescence is
Department of Physiology, Shihezi University Medical influenced by physiological, morphological, and biochemi-
College, 192 Beier Road, Shihezi, Xinjiang 832002,
People’s Republic of China cal changes. As various tissues produce AF for different
2 reasons, different chemical treatments are also employed.
The Key Laboratory of Xinjiang Endemic and Ethnic
Diseases, Medical College of Shihezi University, To our knowledge, few studies on this subject are avail-
Shihezi 832002, China able; we applied confocal λ (lambda) scanning technology

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Journal of Fluorescence

to analyze spectral features of renal AF and used two kinds Antigen Retrieval for Increasing Incidence
of chemicals, namely, ­NaBH4 and SBB, to tackle kidney of Immunofluorescence Positive Consequence
sections. By performing this method, we observed AF
features and determined methods for minimizing AF and Heat and high pressure that induce epitope retrieval can
optimizing specific labels to lay the foundation for applica- reveal antigen in formalin-fixed and paraffin-embedded kid-
tion of immunofluorescence in renal tissue. ney tissues [13]. Citrate buffer (0.01 mmol/L, pH 6.0) was
boiled for 3 min in a microwave at high temperature and
placed in a preheated autoclave. Sections were immersed
in citrate buffer and placed in an autoclave at high tempera-
Materials and Methods ture and pressure for 8 min, after that naturally cooled to
room temperature. Subsequently, 3% hydrogen peroxide
The material method is generally divided into the fol- was added and incubated for 20 min at room temperature.
lowing four parts: (1) preparation of animal models and Finally, sections were soaked in phosphate-buffered saline
tissue sections; (2) preparation of reagents for immu- (PBS) (5 min × 3).
nofluorescence and de-autofluorescence chemicals; (3)
immunofluorescent antibody staining; and (4) imaging Immunofluorescent Staining
and data analysis. Detailed procedures and precautions
are described below. After pretreatment in 10% normal fetal calf serum at 37 °C
for 1.5 h, sections were incubated with primary anti-CD4
rat monoclonal antibodies (1:50; ab25475; Abcam; Cam-
Animals and Tissue Sections bridge, UK) in a humid environment at 4 °C overnight.
The sections were rinsed with PBS, incubated with 10%
Female Sprague–Dawley rats weighing 220 − 300  g, normal fetal calf serum at 37 °C for 1.5 h, and incubated
were purchased from Xinjiang University Center for in goat anti-mice IgG conjugated with fluorescein isothio-
Animal Experiment, Xinjiang, China, for this study. cyanate (FITC) (1:400; ab6840; Abcam; Cambridge, UK)
All experimental protocols conformed to both interna- at 37 °C for 1 h. Subsequently, the sections were washed
tional and Shihezi Medical College guidelines on ethical with PBS buffer with Tween-20 (P1379; Sigma–Aldrich,
use of animals, and all efforts were exerted to mini- Merck KGaA; USA) and incubated in propidium iodide (PI)
mize the number of animals used and their suffering. (P4170; Sigma–Aldrich, Merck KGaA; USA) for 5 min to
Experimental groups were divided into control and acute stain the nuclei. All antibodies were diluted in 10% normal
ischemia–reperfusion injury (IRI) groups (n = 10 for fetal calf serum as blocking reagent. Sections were examined
each group). Renal ischemia was induced by unilateral under a laser confocal microscope (LSM 710, Carl Zeiss
clamping of the renal pedicle with a microvascular clip Microscope, Jena, Germany).
for 45 min, and circulation was subsequently restored by
removing clips as previously described [11, 12]. After Reagents for Diminishing AF
reperfusion for 6 h, normal and ischemic kidney tissues
were removed. Some tissues were stored in Tissue-Tek Sodium Borohydride ­(NaBH4)
and cut into 4 µm paraffin sections. Other tissues were
fixed in 10% neutral buffered formalin (G2161; Solar- Tissue sections were treated with ­NaBH4 (0%, 0.1%, 0.5%,
bio; Beijing; China) and then embedded in paraffin for 1%, 5%, 10% in PBS; 71320; Sigma–Aldrich, Merck KGaA;
storage. USA) thrice for 10 min after incubating tissues in 3% hydro-
gen peroxide but before incubating them with primary anti-
Immunofluorescence bodies. Importantly, the chemicals were set up on ice when
used.
Preparation of Slides Before Immunofluorescent Staining
Sudan Black B (SBB)
To remove paraffin from tissue sections, the slides
were immersed in xylene twice for 5 min followed by Tissue slides were immersed in different concentrations of
decreasing concentrations of ethanol (5 min × 1 in 100%, SBB solutions (0%, 0.1%, 0.2%, 0.4%, and 0.5%; 199664;
5 min × 1 in 90%, 5 min × 1 in 80%, and 5 min × 1 in 70% Sigma–Aldrich, Merck KGaA; USA), which were prepared
ethanol), and then fully hydrated in distilled water. with 70% ethanol for 20 min. The SBB solution concealed
AF after incubation with secondary antibody markers. To

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Journal of Fluorescence

Fig. 1  AF in renal tissues sections examined by using a CLSM. confocal images of AF in the section of renal medulla. Red arrows
Images were acquired at excitations of 488 and 543 nm in FITC and represent blood vessel, yellow arrows represent glomerulus, and
TRITC channels with confocal laser scanning microscopy. Differen- blue arrows represent renal tubules. Wavelength of excitation: FITC,
tial interference contrast (DIC) images were acquired by excitation at 488 nm; TRITC, 543 nm. Scale bar: a − c: 50 µm, a1 − c2: 10 µm
473 nm. a − c1, confocal images of AF in renal cortical areas. a2 − c2,

prevent excessive staining of SBB, the slides were subse- LSM Image Examiner (Olympus, Hamburg, German) and
quently rinsed with 50% ethanol. Adobe Photoshop 7.0 (Adobe Systems, San Jose, California,
USA).
Imaging and Data Analysis
Statistical Analysis
Image Analysis
Data were analyzed by SPSS version 17.0 for Win-
dows (SPSS Inc, Chicago, IL, USA) and expressed as
The sections were examined with an Olympus IX71 micro-
mean ± standard deviation. For parametric data, compari-
scope (Olympus, Hamburg, German), which was equipped
son of different groups was performed by one-way ANOVA,
with four kinds of excitation laser, namely, yellow, cyan,
followed by Tukey’s post hoc test for multiple comparisons.
green, and red excitation lasers at 514, 458, 488, and
Student’s t-test was used for two-mean comparisons. Date
543 nm, respectively. All images were acquired with a Zeiss

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Journal of Fluorescence

concentrations of ­NaBH4 to detect changes in fluorescence


intensity at various concentrations of ­NaBH 4. Results
revealed that treatment with ­NaBH4 slightly reduced AF
regardless of excitation wavelength (Fig. 3). Average fluores-
cence intensity of treated samples demonstrated a significant
difference compared with slices without chemical treatment.
A decreasing trend in AF intensity was observed as concen-
tration of chemicals increased (Fig. 4). Additionally, when
concentration of ­NaBH4 reached 10%, tissues sections were
easily removed (data not shown).

Effect of SBB on AF

As treatment of ­NaBH4 slightly reduced AF of tissues as pre-


Fig. 2  Bar graphs showing average fluorescent intensity in FITC
and TRITC channels under the same imaging conditions. Data are
viously mentioned, we also used SBB, which is commonly
expressed as mean ± standard deviation (SD). N = 6. *p < 0.05 versus used to conceal fluorescence, to investigate its role in AF of
FITC channel kidney tissues. SBB staining after antibody incubation and
prior to cover slip mounting markedly reduced the AF gener-
ated by these natural sources (Fig. 5). Average intensity of
were visualized using GraphPad Prism 5 (GraphPad Soft- AF was effectively reduced in renal tissues excited at 514,
ware Inc, San Diego, CA, USA). Differences in median data 458, 488 and 543 nm in an SBB dose-dependent fashion.
values with p-values < 0.05 were considered significant. Renal tissue AF in the TRITC channel was not observed
when tissues were treated with 0.5% SBB. Intensity of tissue
staining by SBB was visualized using bright-field micros-
Results copy. Afterward, optimized SBB staining procedure was
used for detailed quantitative analysis of AF-quenching
effect (Fig. 6).
Characteristics of AF Background in Renal Tissue
Comparison of the Effects of ­NaBH4 and SBB on AF
As shown in Fig. 1, AF was observed in all renal cells of
the normal kidney under FITC and tetramethylrhodamin Under maximum effective concentration of ­NaBH4 and SBB,
isothiocyanate (TRITC) channels. Intense AF was emitted fluorescence semi-quantitative results (Fig. 7) revealed the
in cortexes (Fig. 1, a − c1), medullas (Fig. 1, a2 − c2), and more significant effect of SBB on AF than ­NaBH4.
blood vessels (red arrows in Fig. 1) of the kidney when visu-
alized under confocal laser scanning microscopy (CLSM). Immunofluorescence Staining After ­NaBH4 and SBB
AF was evidently brighter in the FITC channel compared Combination
with that in the TRITC channel under the same imaging
conditions (Fig. 2). Based on the above results, we selected the two chemicals
with the best concentration, namely, ­NaBH4 and SBB, to
Methods for Controlling AF in Renal Tissues process sections from the rat IRI model, these samples
were stained afterward. Results indicated that the specific
To determine whether renal tissue also emitted AF in other immunofluorescence was impossible to distinguish from
fluorescence channels, the slides were examined for yellow background AF through anti-CD4 antibody labeled with
(YFP) and cyan-blue fluorescent protein (CFP) channels. FITC lacking 10% ­NaBH4 and 2% SBB (Fig. 8, a1 − c1).
We noted that the sections untreated with chemicals all dis- However, improved images (Fig. 8, a2 − c2) were obtained
played AF in the following FITC and TRITC fluorescent after employing this method to reduce AF, optimizing anti-
protein channel (Fig. 3, a − e). body staining to the utmost extent compared with treated
IRI group (Fig. 8, a1 − c1). Compared with treated control
Effect of ­NaBH4 on AF group (Fig. 8, a − c), the brilliant fluorescence was found in
sections of the IRI rat model after treatment (yellow circles
Serial sections of paraffin-embedded normal kidney tissues in Fig. 8, a1 − c2). In summary, treatment with N ­ aBH4 and
were prepared. These sections were treated with increasing SBB yielded the expected effective results for single staining
with anti-CD4 antibody.

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Journal of Fluorescence

Fig. 3  Effect of N
­ aBH4 on AF was examined at different concentra- CFP channel: (b1 − b5); FITC channel: (c1 − c5); TRITC channel:
tions (0%, 0.1%, 0.5%, 1%, 5%, and 10%). Treatment with N ­ aBH4 (d1 − d5); DIC channel: (e1 − e5). Wavelength of excitation: YFP,
(a1 − e5) led to a slight reduction in AF background. All images 514  nm; CFP, 458  nm; FITC, 488  nm; TRITC, 543  nm. Controls
were obtained under the same magnification. YFP channel: (a1 − a5); (untreated sections, a, b, c, d, and e). Scale bar: 50 µm

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Journal of Fluorescence

Fig. 4  Changes in fluorescence
intensities of renal tissues
treated with ­NaBH4 different
concentrations. Fluorescence
intensity profiles of renal tissues
from channel (a) YFP, (b) CFP,
(c) FITC, (d) TRITC, and (e)
all four channels. Statistical
analysis was performed by using
one-way ANOVA followed by
Tukey’s test. Data are expressed
as mean ± SD. N = 6. *p < 0.05
versus untreated group,
#
p < 0.05 versus 0.1% concen-
tration, &p < 0.05 versus 0.5%
concentration, Δp < 0.05 versus
1% concentration, and □p < 0.05
versus 5% concentration

Spectral Analysis of AF Intensity in Normal Kidney an AF peak at the range of 560 − 700 nm excitation light
Tissues emerged when renal sections emitted red fluorescence of
543 nm excitation (Fig. 9d). In summary, the peak value
AF intensity in renal tissues was measured using a laser was similar to AF peaks of flavin and lipofuscin, which were
confocal scanning microscope under the following channels. suggested to be the substances that triggered intrinsic fluo-
In CLSM λ scanning mode, six points in the image were rescence in renal sections.
randomly selected and plotted based on their AF values.
Dominant peak of AF appeared at about 540 nm, when kid-
ney tissue AF was examined through a yellow channel with a Discussion
wavelength of 514 nm (Fig. 9a). Similarly, four AF peaks in
the range of 478–649 nm emission wavelength was observed Appearance of AF in biological tissue cells poses a remark-
when renal sections delivered cyan fluorescence at 458 nm able challenge in immunofluorescence assays. Therefore,
excitation. We also observed that most peaks appeared at exploring the source of AF in renal tissues is particularly
505, 530, 555, and 580 nm (Fig. 9b). As shown in Fig. 9c, important. In our initial investigation, results indicated that
when excited at 488 nm, we found that the main peak of strong fluorescence mainly occurs in the glomeruli, renal
autofluorescence may appear before 500  nm. Similarly, vessels, especially in renal tubules (Fig. 1), coinciding with

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Journal of Fluorescence

Fig. 5  Concentration-dependent reduction of AF by SBB. Intensity of cent pigments in sections). All images were obtained under the same
AF of these SBB treated sections was evaluated with the four fluo- magnification. YFP channel: (a1 − a4); CFP channel: (b1 − b4); FITC
rescence channels. AF intensity of the four fluorescent channels of channel: (c1 − c4); TRITC channel: (d1 − d4); DIC channel: (e1 − e4).
rats decreased after administration of diverse concentrations of SBB Wavelength of excitation: YFP, 514  nm; CFP, 458  nm; FITC,
compared with the normal group. (Low SBB concentrations (< 0.1%) 488 nm; TRITC, 543 nm. Controls (untreated sections, a, b, c, d, and
provided insufficient reduction of autofluorescent pigments. However, e). Scale bar: 50 µm
high SBB concentrations (> 0.2%) adequately reduced autofluores-

previous studies [8, 14]. Baschong et al. have demonstrated and can be used as an indicator of the degree of disease dam-
that red blood cells (RBCs) can also contribute significantly age [3, 16–18]. Interestingly, as shown in Fig. 8, a1 − c2, we
to AF [5]. In this study, punctate fluorescence in glomeruli detected some irregular and extremely bright substances in
and interstitium was assumed to be derived from RBCs (yel- medullary AF of the IRI model when compared with the
low arrows in Fig. 1) [8, 15]. A few studies have proven that control group. These strong fluorescent substances, which
medullary AF significantly increases after IRI or renal tumor scattered in the tubulointerstitium, were considered injured

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Journal of Fluorescence

Fig. 6  Changes in fluorescence
intensities of renal tissues
treated with SSB at different
concentrations. Fluorescence
intensity profiles of renal tissues
from channel (a) YFP, (b) CFP,
(c) FITC, (d) TRITC, and (e)
all four channels. Statistical
analysis was performed by using
one-way ANOVA followed by
Tukey’s test. Data are expressed
as mean ± SD. N = 6. *p < 0.05
versus untreated group,
#
p < 0.05 versus 0.1% concen-
tration, &p < 0.05 versus 0.2%
concentration, and Δp < 0.05
versus 0.4% concentration

interstitial cells, protein casts [8], and infiltrating inflamma-


tory cells. Some studies have also revealed that AF occurs
in structural proteins, especially in collagen and elastin [19,
20], which are the major luminescent groups in the extracel-
lular matrix [21]. Thus, we have identified that collagen and
elastin [1] are sources of renal vascular AF, as reported in
other tissues [14].
The source of AF in kidney tissue is very complex.
Cell AF mainly depends on intrinsic fluorophores, such as
lipofuscin and emodin. Lipofuscin is widely distributed in
various tissues and body organs, such as sweat glands [22],
brain [23, 24], heart [25], liver [26], uterus, intestine, and
kidney [27, 28]. Recently, a number of research studies have
Fig. 7  Semi-quantitative analysis showed the effect of ­NaBH4 and shown that accumulation of lipofuscin is closely related to
SBB at maximum concentrations on kidney AF under different fluo-
rescent channels. Data are expressed as mean ± SD, n = 6. *p < 0.01 cell senescence. Lipofuscin is a pigmented and spontane-
versus ­NaBH4 ously occurring fluorophore produced by lipid oxidation

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Fig. 8  Single-labeling immunofluorescence of CD4 (green, a − a2) in fluorescent substance respectively in FITC channel. Wavelength of
diseased kidney after eliminating AF background. PI was applied to excitation: FITC, 488 nm; TRITC, 543 nm. Treated Control (sections
stain nuclei (red, b − b2). Merged images (c − c2) were obtained with in normal renal tissue): a − c; Untreated IRI (sections in IRI renal tis-
or without treatment of quenching AF. Yellow arrows and yellow sue): a1 − c1; Treated IRI: a2 − c2. IRI, ischemia reperfusion injury.
circles represent specific immunofluorescence signals and brilliant Scale bar: a − c2: 10 µm

and features an excitation peak at 340 − 395 nm, resulting endogenous groups or by histological processing. Previous
in natural fluorescence peaks close to 450 and 600 nm [1, studies showed that tissue fixative and paraffin embedding
29, 30]. The presence of flavonoids in most metabolic path- agents contribute to fluorescence, due to the reaction of alde-
ways is essential in metabolic pathways of sugar, protein, fat, hyde groups with amino acids or proteins in tissues [33, 34].
and nucleic acids [31]. Inherent fluorescence of flavonoids is Regarding the fact that tissue fixatives and paraffin embed-
derived from oxidation reaction, whereas peak of excitation ding agents produce AF, our experiment did not establish an
light appears at 360 and 450 nm, with an AF wavelength at additional control group to prove separately.
520 nm [31, 32]. In CLSM scans, peaks of kidney section Currently, several strategies for controlling AF have been
AF were close to 480 − 590 nm. These results are similar put forward [5, 9]. We divided the protocols for elimina-
to the peaks of flavin and lipofuscin; thus, we speculate tion of AF into three categories namely, chemically reduc-
that flavin and lipofuscin may be the main sources of AF in ing compounds [33, 34], dyes with affinity to stain vari-
rat kidney sections [21, 25, 27]. AF is generated either by ous tissue components [9], and photobleaching [35]. As

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Journal of Fluorescence

Fig. 9  Spectrum analysis of AF of normal rat kidneys using confo- 458 nm, (c): FITC; 488 and (d): TRITC; 543 nm excitation waves
cal microscope λ scanning. Six points were selected randomly to plot (one point represents to one pixel value)
curves of AF using LSM software under (a): YFP; 514 nm, (b): CFP;

previously illustrated in other histological sections, ­NaBH4 ­NaBH4 may lie in the fact that AF in kidney tissues mainly
has long been applied to correct unnecessary fluorescence in results from the actions of endogenous substance and not
formalin-fixed or glutaraldehyde-fixed tissues [33, 34]. The just by tissue fixation.
exact mechanism of N ­ aBH4 transpires via the interaction Unlike ­NaBH4, SBB is a conventional, fat-soluble four-
between aldehydes and ketones, causing their reduction into nitrogen dye that can mask AF of tissues. Based on its ability
their respective alcohols. However, the usage of ­NaBH4 in to dissolve the main AF-inducing lipid components, such as
other tissue specimens was restricted due to its adverse effect lipofuscin, SBB is often used to eliminate AF in the brain
on mounting quality of treated tissues. In the present study, or myocardium [37, 38]. Remarkably, SBB possesses strong
we tested treatment of kidney tissue at different ­NaBH4 light absorption property in the visible range and features no
concentrations and observed that as ­NaBH4 concentration AF at 640 nm [24, 39]. In this study, SBB staining was not
increased, AF intensity decreased. Although to a certain used to directly describe the observed signals but to mask
extent, as the concentration of N
­ aBH4 increases, AF in renal unnecessary signals and to improve signal-to-noise ratio of
tissue presents a downward trend, it also has a detrimental samples. Schnell et al. [25] showed concentration-depend-
effect. When N­ aBH4 concentration exceeded 10%, the tissue ent reduction in lipofuscin-like AF by using SBB, showing
was easily removed from the slide, or AF intensified due to agreement with our results. They also revealed that low SBB
induction of brighter fluorescence, such as in erythrocytes concentrations (< 0.01%) resulted in insufficient reduction
[36], suggesting that this method is inappropriate for renal in autofluorescent pigments, whereas high concentrations
tissues. A potential explanation of the low effectiveness of (> 1%) caused adequate reduction in lipofuscin-like AF in

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neural tissues [5]. Similarly, we discovered that an SBB sections should be processed as fast as possible at the lowest
concentration of 0.5% can almost completely conceal auto- possible temperature.
fluorescent pigments in renal tissues and also mask specific
signals. However, this phenomenon can be reversed by treat- Acknowledgements  The present study was supported by National Nat-
ural Science Foundation of China (No. 81560175 and No. 81260159),
ment with a more soluble reagent, which can wash off the the High Level Talent Research Project of Shihezi University (grant no.
SBB stain. In summary, these data showed that at a certain RCSX201705), and Xinjiang Autonomous Region Graduate Research
range, higher SBB concentrations not only cause better fluo- and Innovation Project (grant no. XJGRI2017033).
rescence suppression on the background, but also increase
the degree of attenuation of signals, indicating that optimum
concentration of 0.5% is inadequate for immunofluorescence
staining. Although SBB treatment provided more effective References
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