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Copyright © 1993, American Society for Microbiology
The plant-pathogenic fungus Fusarium oxysporum was successfully transformed with the P-D-glucuronidase
gene from Escherichia coli (gusA) (GUS system) in combination with the gene for nitrate reductase (niaD) as
the selectable marker. The frequency of cotransformation, as determined by GUS expression on plates
containing medium supplemented with 5-bromo-4-chloro-3-indolyl glucuronide (GUS'), was very high (up to
75%). Southern hybridization analyses of GUS' transformants revealed that single or multiple copies of the
gusA gene were integrated into the genomes. High levels of GUS activity are expressed in some transformants,
but activity in F. oxysporum does not appear to be correlated with the copy number of the gusA gene. Since the
highest activity was found in a transformant with a single copy, it can be assumed that sequence elements of
F. oxysporum integrated upstream of the gene can act as a promoter or enhancer. Expression of the gusA gene
was also detected during growth of the fungus in plants, indicating that the GUS system can be used as a
sensitive and easy reporter gene assay in F. oxysporum.
The GUS gene fusion system (Escherichia coli P-D-glUCU- transformed strains should lead the way to further investi-
ronidase gene) was described by Jefferson (14, 15) as a gations of gene expression in this fungus.
powerful tool for the assessment of gene activity in trans-
genic plants and for the development of molecular genetic
analysis. The utility of this system has been shown for MATERIALS AND METHODS
bacteria, animals, and plants (15) and, more recently, for
yeasts and filamentous fungi (4, 20, 21, 23, 25). The first
report on the construction and testing of a plasmid express- Strains and media. The following wild-type strains of F.
ing GUS in filamentous fungi (23) suggested that the system oxysporum were used: a pathogen of melon (FOM150), a
could be developed for studies on disease spread and fungal pathogen of flax (FOLn3), and a nonpathogenic strain
biomass quantification. (FO47) (obtained from C. Alabouvette, Institut National de
Our objective was to apply this tracking concept to the la Recherche Agronomique, Dijon, France). From the first
important plant pathogen Fusarium oxysporum. Indeed, two strains, nitrate reductase-deficient mutants were se-
difficulties are encountered in monitoring populations of a F. lected on the basis of resistance to chlorate. Mutant nia9
oxysporum strain in association with roots because of the
from FOM150 and mutant niaS2 from FOLn3, presumably
presence of the F. oxysporum strain along with many other resulting from a mutation in the nitrate reductase structural
fungal species and other strains of the same species. Isola- gene, as indicated by nutritional tests (5, 8), were used as
tion on selective media of a marked strain by using a recipient strains in transformation experiments. The minimal
pigmentation marker or resistance to benomyl has been used and complete media and culture conditions used were those
for this purpose (2, 24), but this technique does not enable described previously (11).
visualization of hyphae at the root surface and quantification Vectors. Plasmid pNOM102, constructed by Roberts et al.
of root colonization by pathogenic or nonpathogenic strains. (23), contains the E. coli 0-glucuronidase gene (gusA)
In this paper we describe the successful transformation of flanked by the glyceraldehyde 3-phosphate promoter (gpd)
strains of F. oxysporum with the gusA gene in combination fromAspergillus nidulans upstream and the A. nidulans trpC
with the nitrate reductase structural gene of Aspergillus transcription termination signal downstream (Fig. 1A). Plas-
nidulans (niaD) as the selectable marker (18). The usefulness mid pAN301 was obtained by insertion in pFB39 of an A.
of the GUS gene fusion system for studies on root coloniza- nidulans DNA fragment carrying the nitrate reductase struc-
tion by F. oxysporum was then tested in preliminary exper- tural gene (niaD) (18).
iments by assaying GUS activity in vitro and in vivo in order Transformation procedure. F. oxysporum was transformed
as previously described by Langin et al. (16). Suspensions
to localize and quantify the active biomass of the fungus in
roots. Moreover, our data on the molecular structure of containing 4 x 107 protoplasts were mixed with plasmids (5
,ug of pAN301 and 5 p,g of pNOM102). Transformants were
selected on medium containing nitrate as the sole nitrogen
*
Corresponding author. source for the Nia+ phenotype conferred by pAN301. The
t Present address: Station de Recherches de Lutte Biologique, controls included protoplasts incubated with pFB39 to test
Institut National de la Recherche Agronomique, La Miniere, 78285 the stability of the recipient strains and protoplasts incu-
Guyancourt, France. bated with pAN301 to test the efficiency of the transforma-
1767
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- E. coli gusA coding sequence
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F. oxysporum DNA
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VOL. 59, 1993 GUS GENE FUSION SYSTEM 1769
tion procedure. Transformants were subsequently purified Fluoroskan II fluorimeter (Labsystems, Les Ulis, France).
by uninucleated conidium isolation. The GUS activity of each transformant was calculated from
DNA isolation and Southern hybridization. Plasmids were the slope of the line showing the increase in fluorescence per
prepared from E. coli by the alkaline lysis method (19), and minute and was expressed in nanomoles of 4-methylumbel-
total genomic DNAs from F. oxysporum transformants were liferone (MU) produced per minute per milligram of protein
isolated as previously described (16). Restriction enzyme by extrapolating from an MU standard assay. Protein con-
digestions, DNA ligation, agarose gel electrophoresis, blot- centration was estimated by the Bradford method (3). Ex-
ting, and hybridizations were performed by using standard periments were performed at least in duplicate.
procedures (19) and manufacturers' recommendations. The GUS activities of inoculated plants were measured by
Probes were labeled with 32P by using a T7 random priming using extracts of young flax roots cultured as described
FIG. 1. (A) Partial restriction maps of plasmids pNOM102 and pGUS-T5. (B) Diagrammatic representation of different integration events
including integration of a single copy with a crossover point near the ends of the GUS construct (line 1) or within the gusA coding sequence
(line 2) and integration of tandemly repeated copies of pNOM102 involving the pUC19 part (line 3) or the GUS construct part (line 4) of the
plasmid.
1770 COUTEAUDIER ET AL. APPL. ENvIRON. MICROBIOL.
preventing direct selection of such transformants. The intro- FIG. 2. Southern blot analysis of F. oxysporum transformants.
Genomic DNAs from individual transformants were digested with
duction of the gusA gene by cotransformation was very EcoRI, electrophoresed on 0.6% agarose, transferred to a nylon
efficient for both strains, as indicated by the proportion of membrane, and probed with the 4.5-kb HindIII-EcoRl pNOM1O2
GUS+ phenotypes on plates containing X-Gluc medium (50 fragment, which contains the entire GUS construct (Fig. 1). Lane 1
and 75% GUS+ transformants in Fusanum oxysporum f. sp. contained the control (transformant M-T6; lanes 2 through 10
melonis and Fusarium f. sp. lini, respectively). Transfor- contained transformants M-T5, M-Tl, M-T2, M-T7, L-T89, L-Tl,
mants were designated with a letter prefix according to L-T3, L-T4, and L-T6, respectively.
whether they were obtained by transformation of Fusarium
oxysporum f. sp. melonis (M) or Fusarium f. sp. lini (L)
strains. Eight cotransformants exhibiting a GUS' phenotype consistent with integration of a single copy into the chromo-
on X-Gluc plates were tested for mitotic stability, assayed some via recombination within the GUS construct se-
fluorometrically for GUS activity, and analyzed by Southern quences. Transformant L-Tl (Fig. 2, lane 7) produced one
blotting. The results are summarized in Table 1. hybridizing band larger than plasmid pNOM102. Further
The mitotic stabilities of different individual transformants analysis of this transformant with another restriction enzyme
tested in the microtiter assay with the MUG substrate revealed two distinct bands after hybridization with the same
indicated that most of the transformants analyzed retained probe (data not shown), indicating that a single copy of
the GUS activity of the original transformant after five pNOM1O2 was integrated. On the basis of the relative
transfers on nonselective medium. intensities of the two bands, transformants L-Tl and M-T5
Fluorometric measurements of GUS activity in different probably arose from integration via a crossover point located
strains showed that no significant GUS activity was detected near the ends of the GUS construct to give two hybridizing
in strains exhibiting a GUS- phenotype on X-Gluc medium bands, only one of which (the larger) hybridized strongly to
plates (the two wild-type strains and transformants L-T89 the probe (Fig. iB, line 1). The pattern of hybridization
and M-T6). In GUS' transformants, the levels of GUS observed in five GUS' transformants (M-T1, M-T2, L-T3,
activity varied greatly; a maximum 100-fold difference was L-T4, and L-T6) consists of a major hybridizing band at a
observed, and in general the levels were similar to those size corresponding to linearized copies of pNOM1a2 associ-
expressed in other fungi with the same vector (23). ated with additional bands at larger and smaller sizes (Fig. 2,
Southern hybridizations were performed to determine the lanes 3 and 4, and 8 through 10). This pattern can be
fate of plasmid DNA in transformants. Total genomic DNAs explained by the integration of unmodified, tandemly re-
were isolated from 10 Nia+ transformants (8 GUS+ and 2 peated copies of the plasmid at the same site, leading to one
GUS- transformants), digested to completion with EcoRI, or two flanking fragments, depending on the position of the
which cuts plasmid pNOM102 once, and probed with the recombination event1B, in the plasmid (Fig. lines 3 and 4).
4.5-kb HindIII-EcoRI pNOM102 fragment containing the With transformant M-T7 (Fig. 2, lane 5), more than three
entire GUS construct (Fig. 1A). Sequences homologous to bands were discerned, indicating that integration had oc-
pNOM102 were detected in the eight GUS' transformants curred at different sites in the recipient strain genome or that
and in one of the two GUS- transformants tested (Fig. 2). rearrangements had occurred.
The hybridization pattern found in transformants M-T5 and From this analysis, it should be noted that the integration
L-T89 consists of two hybridizing bands, neither of which is of one copy of the plasmid can lead to no GUS expression or
the size of the original plasmid (Fig. 2, lanes 2 and 6). This is low or high levels of GUS expression. To explain the
VOL. 59, 1993 GUS GENE FUSION SYSTEM 1771
30 T b
25 +
z
20 t
IL
E. 15
0 +
+
0 l ---
I-.
0 2 0
I-li V
0
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IL
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I-
FIG. 3. GUS activities in flax roots inoculated with suspensions of conidia of transformed and untransformed strains. The following
treatments were used: noncontaminated plants (CONTROL); plants contaminated with wild-type strain FOLn3 (5 x 102 conidia per ml) (FO
LINI); plants contaminated with nonpathogenic strain F047 (1 x 106 conidia per ml) (FO47); plants contaminated with GUS transformed
strain L-T6 (5 x 102 conidia per ml) (LT-6); plants contaminated with both nonpathogenic strain F047 (1 x 106 conidia per ml) and GUS
transformed strain L-T6 (5 x 102 conidia per ml) (LT-6 + FO 47). Values are averages of three replicates and are expressed as nanomoles
of MU produced per milligram of protein after a 40-min reaction. Bars labelled with the same letter are not significantly different (P = 0.05;
Newmann-Keuls test).
absence of GUS activity in transformant L-T89, the restric- strains or GUS + transformant L-T6, alone or mixed with
tion map of the GUS construct was determined more pre- antagonistic strain F047, were assayed fluorometrically for
cisely for this strain. A hybridization analysis (data not GUS activity. A significant level of GUS activity was found
shown) indicated that the integration event involved the when strain L-T6 was inoculated alone, indicating that the
1.9-kb NcoI fragment of pNOM102 (Fig. 1B, line 2), leading transformant still expressed GUS during growth in plants
to the disruption of the gusA coding sequence. For the other (Fig. 3). When this strain was associated with nonpathogenic
two single-copy transformants (M-T5 and L-T1), the great strain F047, the GUS activity detected did not differ signif-
difference in the GUS activity levels suggests that the site of icantly from the background activity in the noncontaminated
integration may influence the expression of the gusA gene. A control roots. In this combination, the reduction in GUS
molecular analysis of the integration event in transformant activity should reflect a reduction in the level of infection,
M-T5, which exhibited the highest GUS activity level, was revealing the antagonistic role of the nonpathogenic strain.
performed. A hybridization analysis showed that the site of Expression of GUS activity was detected by the observa-
the crossover leading to the integration of pNOM102 was tion of blue mycelium on young flax roots contaminated with
located within the EcoRI-NcoI fragment which contains the transformant L-T6 and stained with the X-Gluc substrate. In
gpd promoter sequences. To analyze more precisely the contrast, stained hyphae were not observed on roots inocu-
effect of both the truncation of this region and the fusion with lated with both pathogenic and nonpathogenic strains (Fig. 4
Fusanum sequences, a plasmid, designated pGUS-T5, was and data not shown).
rescued from transformant M-T5. This plasmid carried the
gusA coding sequence, the trpC transcriptional terminator, DISCUSSION
and the recombinant EcoRI-NcoI fragment (Fig. 1A). Partial
sequencing of the 5' region of the new GUS construct (400 Our results show that the introduction of nonselectable
bp upstream from the ATG) showed that the sequence is genes into Fusanium sp. is very efficient since cotransforma-
identical to that present in pNOM102. Thus, the elements tion frequencies of more than 50% were obtained by using
responsible for the strong GUS activity should be located equimolar amounts of selected and unselected DNAs. The
upstream from the promoter region. In an additional exper- levels of efficiency observed are similar to those reported in
iment, the glucuronidase activities of the three cotransfor- other filamentous fungi (9, 22, 23) and allow the introduction
mants obtained via introduction of pGUS-T5 in F. oxyspo- of desired genes without the need for complex plasmid
rum were similar to or higher than the activity of construction. Identification of GUS' transformants can be
transformant M-T5. A Southern blot analysis of these performed quickly by testing a large number of strains in a
cotransformants did not permit us to determine the inte- simple microtiter assay. The maintenance of GUS activity
grated copy number. Nevertheless, these results argue for through conidiation correlates well with the stable integra-
the presence of total sequences in pGUS-T5 that are respon- tion of the reporter gene in the genomes of cotransformants.
sible for the level of strong activity observed in transformant Various levels of GUS activity are found in transformants,
M-T5. and these levels are higher than those observed in Clados-
In pathogenicity assays, all transformants gave wilt symp- porium fulvum but lower than those observed in A. nidulans
toms indistinguishable from those caused by the two wild- (23) or Pseudocercosporella herpotrichoides (4). The varia-
type strains. Extracts of flax roots infected by wild-type tion observed in the expression of GUS activity does not
1772 COUTEAUDIER ET AL. APPL. ENVIRON. MICROBIOL.
reflect differences in plasmid copy number between trans- strain F047 inhibited the germination of wild-type strain
formants. Similar observations were reported in C. fulvum FOLn3 in the rhizosphere of flax roots (6). Additional
by Roberts et al. (23), but these observations appear to be studies (12) showed that strain F047 drastically reduced the
different from those observed by Bunkers (4) for P. herpo- GUS activity of the pathogen in the root tissues, while other
trichoides. The differences in GUS activity levels could be strains did not modify the activity of the pathogen, and
mediated by different integration positions. It was interesting reduction was related to the population ratio of FOLn3 GUS
to note that the highest level of GUS activity was obtained in to F047.
a transformant carrying only one copy of pNOM102. Such X-Gluc-stained hyphae of the transformed strain were
strong activity does not result from structural modifications clearly visible on root tissues and could be easily observed
of the GUS construct produced by the integration event. The after different contact times between roots and pathogenic
analysis of the structure of rescued plasmid pGUS-T5 indi- strains. Direct examination of the location of hyphae by
cated that F. oxysporum sequences located near the inte- histochemical localization of glucuronidase activity should
grated plasmid promoted or enhanced GUS gene activity. permit workers to study the root colonization pattern of F.
Such a plasmid could be an alternative to pNOM102 in oxysporum in various environments; indeed, little is known
experiments involving F. oxysporum. about what happens between germination in root exudates
Fluorogenic measurement of GUS activity by using MUG and the detection of the pathogen in the vascular system
as a substrate provides a useful tool for quantifying the (13). Moreover, a combination of histochemical techniques
active root-colonizing biomass of a strain containing the and the GUS marker technique may be feasible for the
gusA gene. Previously, the basic methods used to evaluate development of a staining procedure capable of locating
the colonization of roots by F. oxysporum have consisted of hyphae of both nonpathogenic and pathogenic strains in host
the identification of colonies arising from root fragments tissues. The resulting information would be of considerable
plated on selective medium. This kind of bioassay was not value in elucidating the mechanism by which a nonpatho-
suitable for investigations focused on interactions between genic F. oxysporum strain reduces the incidence of Fusar-
strains. Our results show that the GUS marker system can ium wilt disease (1, 6). Our results illustrate the suitability of
allow rapid quantification of fungal growth in roots. This GUS genetic marking of F. oxysporum for identifying and
system is also a new, accurate method for the study of monitoring a specific population throughout studies of plant-
competition between pathogenic and nonpathogenic F. oxy- fungus interactions. Another application of the expression of
sporum strains at the root level. The reduction in the GUS the GUS gene in F. oxysporum is in the study of the basic
activity level in flax roots exposed to the GUS' pathogenic mechanism of transposition recently reported in this fungus
strain in association with nonpathogenic strain F047 sug- (10). In this case, the 3-glucuronidase marker gene can be
gests that the nonpathogenic strain inhibited the colonization used as a reporter gene to develop a sensitive assay for the
of living root tissues by the pathogenic strain. These results excision of transposable elements introduced into various F.
are in agreement with earlier observations showing that oxysporum strains.
VOL. 59, 1993 GUS GENE FUSION SYSTEM 1773