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Linking the chemistry and physics of food with health and nutrition

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Q. Wang, Z. Liu, X. Dong, C. Wen, C. Ai, Y. Zhang, Z. Wang and B. Zhu, Food Funct., 2020, DOI:
10.1039/D0FO02017F.
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Inhibitory activities of marine sulfated polysaccharides against DOI: 10.1039/D0FO02017F

SARS-CoV-2

Shuang Song1, Haoran Peng2, Qingling Wang3, Zhengqi Liu1,4, Xiuping Dong1,
Chengrong Wen1, Chunqing Ai1, Yujiao Zhang1, Zhongfu Wang5, Beiwei Zhu1,*

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1National Engineering Research Center of Seafood, School of Food Science and Technology,
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Collaborative Innovation Center of Seafood Deep Processing, Dalian Polytechnic University,

Dalian 116034, China

2 Department of Biomedical Defense, Faculty of Naval Medicine, Naval Medical University

(Second Military Medical University), Shanghai 200433, China

3 CAS Key Laboratory of Pathogenic Microbiology and Immunology, Institute of Microbiology,

Chinese Academy of Sciences, Beijing 100101, China

4 Beijing Advanced Innovation Center for Food Nutrition and Human Health, College of Food

Science and Nutritional Engineering, China Agricultural University, Beijing, 100083, China

5 Key Laboratory of Resource Biology and Biotechnology in Western China, Ministry of Education

and Provincial Key Laboratory of Biotechnology, College of Life Sciences, Northwest University,

Xi’an 710069, China


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Coronavirus disease 2019 (COVID-19) caused by the severe acute respiratory
DOI: 10.1039/D0FO02017F

syndrome coronavirus 2 (SARS-CoV-2) has spread around the world at an


unprecedented rate. In the present study, 4 marine sulfated polysaccharides were
screened for their inhibitory activity against SARS-CoV-2, including sea cucumber
sulfated polysaccharide (SCSP), fucoidan from brown algae, iota-carrageenan from
red algae, and chondroitin sulfate C from shark (CS). Of them, SCSP, fucoidan, and

Food & Function Accepted Manuscript


carrageenan showed significant antiviral activities at concentrations of 3.90~500
μg/mL. SCSP exhibited the strongest inhibitory activity with IC50 of 9.10 μg/mL.
Furthermore, a test using pseudotype virus with S glycoprotein confirmed that SCSP
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could bind to the S glycoprotein to prevent SARS-CoV-2 host cell entry. The three
antiviral polysaccharides could be employed to treat and prevent COVID-19.
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1. Introduction DOI: 10.1039/D0FO02017F

COVID-19 is caused by severe acute respiratory syndrome associated coronavirus-2


(SARS-CoV-2). This infectious disease has spread to most countries in the world
since the first report in December 2019. By now, it has infected over 15 million
people and killed more than 638,000. The ongoing COVID-19 pandemic has become

Food & Function Accepted Manuscript


a major threat to public health and social stability. Effective therapies to treat or
prevent COVID-19 are urgently needed.
Some natural sulfated polysaccharides have already been reported for their
potent inhibitory effects on virus infection. Depolymerized fucosylated chondroitin
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sulfate extracted from sea cucumber showed in vitro activity against human
immunodeficiency virus type-11. Chondroitin sulfate E from squid cartilage has been
considered as a potent antiviral agent against T-cell leukaemia virus type I2 and the
flavivirus dengue3. Iota-carrageenan has been reported to inhibit the infection of some
human viral pathogens, e.g. papilloma virus4 and influenza A virus5. It has been
suggested that the sulfated polysaccharide could bind to virus envelope protein so to
inhibit virus entry into the host cell3.
Like other pathogenic enveloped viruses, SARS-CoV-2 uses unique envelope
glycoprotein, the spike (S) glycoprotein, for host cell receptor recognition and
binding, and subsequent viral and host cell membrane fusion6. Thus, interacting with
the S glycoprotein could stop virus entry into the host cell. It is exciting to know that
heparin, a highly sulfated polysaccharide, could bind tightly to the SARS-CoV-2
spike glycoprotein7, and the administration of heparin is associated with lower
mortality in patients with COVID-198. However, the medication safety of heparin is a
concern because of its strong anticoagulant activity9.
In order to find safe and effective antiviral agent to fight COVID-19, 4 marine
sulfated polysaccharides were screened for their inhibitory activities against SARS-
CoV-2 in the present study, including sea cucumber sulfated polysaccharide (SCSP),
fucoidan from brown algae, iota-carrageenan from red algae, and chondroitin sulfate
C from shark (CS). SCSP was extracted from Stichopus japonicus which is a kind of
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sea cucumber consumed in Asian countries for thousands of years, and it has been
DOI: 10.1039/D0FO02017F

proved to be beneficial for health in vivo10, 11. Fucoidan from brown algae and CS
have been used in medicines and nutritional supplements for their healthy functions12,
13. Carrageenan is in worldwide commercial use as an additive for foods. Thus, these
polysaccharides are generally considered as safe for oral administration. In the present
study, we investigated their inhibitory activities against SARS-CoV-2, and found

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SCSP, fucoidan and carrageenan as promising inhibitors of SARS-CoV-2 infection.

2. Materials and methods


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2.1. Materials

Sea cucumber sulfated polysaccharide (SCSP) was extracted from Stichopus japonicus
as we previously reported11. Fucoidan, iota-carrageenan and chondroitin sulfate C
sodium (CS) were bought from Qingdao Brightmoon Seaweed Group Co., Ltd
(Qingdao, China), Aladdinn Industrial Corporation (Shanghai, China), and ChromaDex,
Inc (Irvine, California, USA). Standard monosaccharides including L-fucose (Fuc), D-
glucuronic acid (GlcA), D-galacturonic acid (GalA), D-galactose (Gal), D-glucose
(Glc), L-arabinose (Ara), D-ribose (Rib), D-rhamnose (Rha), D-mannose (Man), and D
-xylose (Xyl) were purchased from Sigma-Aldrich (MO, USA).

2.2 Characterization of polysaccharides

The uronic acid content was determined through the carbazole-sulfuric acid method
with GlcA as a standard. The sulfate content was measured by the barium chloride-
gelatine method using anhydrous potassium sulfate as a standard.
Monosaccharide compositions of these polysaccharides were analyzed according
to our previously reported method14. Briefly, polysaccharides were hydrolyzed at
120 °C with 2 M trifluoroacetic acid for 3 h, and the free monosaccharides were labeled
with 1-phenyl-3-methyl-5-pyrazolone (PMP). Then the PMP derivatives were detected
by a LXQ linear ion trap mass spectrometer equipped with an electrospray ion source
(ESI) and a photodiode array detector (PAD). A Silgreen ODS C18 (250 × 4.6 mm, 5
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μm) was applied and kept at 30 °C, and the mobile phase was 20 mM ammonium
DOI: 10.1039/D0FO02017F

acetate-acetonitrile (83:17, v/v) with a flow rate of 1.0 mL/min.

2.3 Virus neutralization assay

The SARS-CoV-2 strain was isolated from COVID-19 patients in Shanghai, China.
Vero E6 cells were cultured in DMEM media supplemented with 10% FBS and 1%

Food & Function Accepted Manuscript


antibiotic in saturated humidity at 37 °C with 5% CO2. SARS-CoV-2 neutralization
assay was carried out in biological safety protection third-level laboratory of Naval
Medical University. Briefly, Vero E6 cells (8 000~10 000 cells /well) were seeded in
96-well plates and incubated for 12 h. Then 300 FFU (focus forming unit) virus in 100
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μL DMEM medium containing 2% FBS was incubated with polysaccharides for 30 min
at 37 °C. After that, the mixture replaced the medium in the well to infect Vero E6 cells.
After incubation for 24 h, the virus protein expression was measured by indirect
immunofluorescent assay (IFA). The serum from COVID-19 patient in recovery stage
was used as the primary antibody, and Alexa Fluor® 488-conjugated anti-human IgG
(ThermoFisher, USA) was the secondary antibody. After fluorescent antibody reactions,
DAPI was used to stain the nuclear DNA of live cells. Images of the cells were captured
using a Cytation 5 Imaging Reader (BioTek, USA).

2.4 Pseudovirus preparation and neutralization assay

SARS-CoV-2 pseudovirus with S glycoprotein was prepared and neutralized as


previously described with minor modification15. Briefly, the full-length coding
sequence of HCoV-19 spike was cloned into the pCAGGS vector and named as
pCAGGS-HCoV-19-S. The construct was verified by direct DNA sequencing. Then
the plasmids of pCAGGS-HCoV-19-S and pNL4-3.luc.RE were co-transfected into
HEK 293T cells. After 48 h culture, the supernatant was harvested and centrifuged to
obtain pseudovirus. The 50% tissue culture infectious dose (TCID50) was determined
by infection of Huh7 cells.
For pseudovirus neutralization assay, 100 TCID50 /well pseudovirus in medium
without FBS was incubated with polysaccharides for 30 min at room temperature. Then
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the mixtures (100 μL) were used to infect Huh7 cells rinsed with PBS. After 5DOI:h,10.1039/D0FO02017F
100
μL medium with 5% FBS was added. EK1 peptide was used as the positive control.
After incubation for another 48 h, luciferase activity was measured using a GloMax 96
Microplate luminometer (Promega, USA).

3. Results and discussion

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3.1 Characterization of polysaccharides

Because the bioactivities are greatly dependent on structural features, the


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compositions of polysaccharides were determined and provided in Table 1. Compared


to the monosaccharides in their well-known main structures11, 16-18 (Fig. 1), some
other monosaccharides were also detected. SCSP are mainly comprised of fucosylated
chondroitin sulfate (Fig. 1A) and fucoidan (Fig. 1B)11. Fucoidans from sea cucumber
and from brown algae have the same backbone (Fig. 1B), but some fucoidans from
brown algae contain a large proportion of Gal16. Among these polysaccharides, SCSP
has the highest sulfate content (25.8%), followed by fucoidan (22.8%) and CS
(20.4%). Compared with those reported11, 16, the chemical compositions of these
polysaccharides varied a little possibly due to changes of isolation procedures or
materials.

3.2 Inhibitory effects of polysaccharides against SARS-CoV-2

The activity of the 4 polysaccharides against SARS-CoV-2 was screened. As shown in


Fig. 2, SCSP, fucoidan and carrageenan inhibited SARS-CoV-2 infection on Vero E6
cells at various concentrations. The representative images of immunofluorescent assay
are shown in Fig. 3. Among these polysaccharides, SCSP showed the strongest antiviral
activity with IC50 of 9.10 μg/mL. Fucoidan could also inhibit SARS-CoV-2 infection
at a concentration as low as 15.6 μg/mL. Iota-carrageenan could prevent the infection
at concentrations ≥ 125 μg/mL, and virus aggregation could be observed in the samples
treated with carrageenan (Fig. 3) possibly due to its gelling property. But no obvious
inhibitory effect was observed for CS, and this is consistent with the recent report that
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CS shows no competitive binding to S protein19. In addition, the effects ofDOI:
these 4
10.1039/D0FO02017F

polysaccharides on the cell viability were also evaluated, and none of them
demonstrated cytotoxicity (Fig. 4).
SCSP with the highest sulfation degree showed the best inhibitory effect, followed
by fucoidan from seaweed. Kwon et al recently reported that fucoidans from the
seaweed Saccharina japonica had great antiviral activity against SARS-CoV-219. Then

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SCSP could be a better candidate drug against SARS-CoV-2 for its more potent activity.
Considering the poor oral bioavailability of polysaccharides, it is better to deliver these
bioactive polysaccharides by a nasal spray or inhaler. Because fucoidan and iota-
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carrageenan are economical, it is also promising to apply them in foods and daily
chemical products against SARS-CoV-2. Of note, the antiviral activities of these
polysaccharides were not positively associated with the sulfate content because highly
sulfated CS showed no obvious activity. According to the previous research on the
interaction of virus envelope protein with heparin, besides a high charge density, a high
level of structural flexibility was also required for the polysaccharides to bind to S
glycoprotein20. Thus, the inhibition activity against SARS-CoV-2 of the
polysaccharides may be also influenced by their structural flexibility.

3.3 Inhibitory effect of SCSP against pseudotype virus with S glycoprotein

It has been revealed that before SARS-CoV-2 host cell entry, S glycoprotein will bind
to heparan sulfate (HS) chains of host cell surface proteoglycans21. Therefore, S
glycoprotein is the most possible target for the sulfated polysaccharides with structures
like HS. Thus, pseudotype virus with S glycoprotein of SARS-CoV-2 was used to
evaluate the antiviral activity of SCSP, and the result was shown in Fig. 5. SCSP
demonstrated significant inhibitory effect against pseudotype virus at 100 and 1000
μg/mL. This result confirmed that SCSP interacted with the S glycoprotein of SARS-
CoV-2 to inhibit SARS-CoV-2 infection. A well-known sulfated polysaccharide,
heparin has also been reported to prevent SARS-CoV-2 infection by binding to the S
glycoprotein of SARS-CoV-27.
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4. Conclusion DOI: 10.1039/D0FO02017F

In summary, 4 sulfated polysaccharides from marine organisms were screened for


the activities against SARS-CoV-2, and 3 of them showed significant antiviral activities,
including SCSP from sea cucumber, fucoidan from brown algae, and iota-carrageenan.
SCSP demonstrated the strongest inhibitory activities. Further experiment using

Food & Function Accepted Manuscript


pseudotype virus with S glycoprotein indicates that SCSP binds to the S glycoprotein
to prevent SARS-CoV-2 host cell entry. Fucoidan and iota-carrageenan are also
promising in application because they are economical and safe. The three bioactive
polysaccharides deserve further efforts for application in the fight against COVID-19.
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Conflicts of interest
The authors have no potential financial conflicts of interest.

Acknowledgements
This work was funded by the National Key Research and Development Program
of China (No. 2019YFD0902005) and National Natural Science Foundation of China
(No. 31972084).

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21. J. F. W. Chan, K. H. Kok, Z. Zhu, H. Chu, K. K. W. To, S. Yuan and K. Y. Yuen, Genomic
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Table 1. The chemical compositions of sea cucumber sulfated polysaccharide DOI:
(SCSP),
10.1039/D0FO02017F

fucoidan, iota-carrageenan, and chondroitin sulfate C (CS).


Polysaccharides Monosaccharide molar ratio Sulfate content Uronic acid content
% %
SCSP GlcN:GalN:Glc:Gal:Fuc= 25.8±2.4 16.5±0.5
1.0:1.7:1.1:1.8:16.0
Fucoidan Rha:Gal:Fuc= 1.0:12.6:6.3 22.8±0.7 4.7±0.4

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Carrageenan Glc:Gal=1.0:5.2 10.4±0.5 0.9±0.1

CS GlcN:GalN:Glc:Gal= 20.4±0.3 42.7±4.2


3.3:6.7:1.0:5.2
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DOI: 10.1039/D0FO02017F

Figure Captions

Fig. 1 Chemical structures of fucosylated chondroitin sulfate (A), fucoidan (B), iota-
carrageenan (C), and chondroitin sulfate C (D).

Fig. 2 Inhibitory activities of sea cucumber sulfated polysaccharide (SCSP), fucoidan,

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iota-carrageenan, and chondroitin sulfate C (CS) against SARS-CoV-2.

Fig. 3 Representative images of immunofluorescent assay of sea cucumber sulfated


polysaccharide (SCSP), fucoidan, carrageenan and chondroitin sulfate C (CS) against
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SARS-CoV-2. Indirect immunofluorescent assay with the antibody against SARS-


CoV-2 nucleocapsid protein (in green) and DAPI staining for the DNA of the live
Vero E6 cells (in blue) were performed.

Fig. 4 The effects of sea cucumber sulfated polysaccharide (SCSP), fucoidan,


carrageenan and chondroitin sulfate C (CS) on the viability of Vero E6 cells.

Fig. 5 Inhibitory activities of sea cucumber sulfated polysaccharide (SCSP) against


pseudotype virus with the spike glycoprotein.
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Fig. 1
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Fig. 2
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Fig. 3
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Fig. 4
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Fig. 5
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