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History of Apoptosis Introductory article

Research . Introduction
Article Contents

Lijing Jiang, Center for Biology and Society, Arizona State University, Tempe, Arizona, USA . Phase I: Early Histological Descriptions of Cell Death

. Phase II: Morphological and Functional Study of


Apoptosis

. Phase III: Molecular Study of Apoptosis

. Current Understanding about Apoptosis

Online posting date: 15th June 2012

Apoptosis-like cell death was first observed in developing brilliant minds, competitions and prizes. With the expan-
tissues using histological methods in the mid-nineteenth sion of apoptosis research, the evolving concept of apop-
century. Having been frequently rejected as experimental tosis and its changing research method in history have
artefacts, such biologically active, well-regulated cell become important knowledge for understanding the cur-
death phenomena were reconfirmed in various research
rent field. See also: Apoptosis and the Cell Cycle in Human
Disease; Apoptosis in Developmental Processes; Apop-
contexts during the first half of the twentieth century. In
tosis: Regulatory Genes and Disease
1972, three pathologists observed cell death in patho- First proposed in 1972 as a process of cell deletion that
logical tissues and coined the term ‘apoptosis’ to dis- counterbalances cell proliferation, apoptosis has none-
tinguish the concept of physiological cell death from the theless been studied under various other names since the
concept of passive cell death, necrosis. In the 1980s and mid-nineteenth century. After the early 1990s, the term
1990s, modern molecular biotechnology transformed apoptosis has been misused, questioned and even
apoptosis research from a subject for mostly morpho- redefined. To circumvent unnecessary conceptual conun-
logical investigation to a multivalent, interdisciplinary drums, this article follows the original 1972 definition of
field important to developmental biology, biogerontol- apoptosis from Kerr et al. (1972) and the clarifications
ogy and cancer research. given by the Nomenclature Committee on Cell Death in
2009. Apoptosis, according to the Nomenclature Com-
mittee, is a process of cell death that demonstrates all or
several of characteristic morphological changes that
include ‘rounding-up of the cell,’ ‘reduction of cellular
volume,’ ‘chromatin condensation, nuclear fragmen-
Introduction tation,’ ‘plasma membrane blebbing,’ ‘engulfment by
resident phagocytes,’ etc. (Kroemer et al., 2009). Cell death
Since the mid-1980s, research on apoptosis, regulated in normal development is often referred to as programmed
physiological cell death, has progressed from an obscure cell death, with the understanding that death is part of
subject to an important field promising answers to crucial the development programmed genetically. When pro-
biological and biomedical questions. During development, grammed cell death shows apoptotic morphology, the
groups of cells undergo apoptosis to form structures such two concepts can be used interchangeably. See also:
as lumens and digits. Apoptosis also serves to eliminate Apoptosis: Molecular Mechanisms; Apoptosis: Morpho-
cells with defective deoxyribonucleic acid (DNA) to pre- logical Criteria and Other Assays; Cornification of the
vent potential tumours. Although balanced apoptosis is Skin: A Non-apoptotic Cell Death Mechanism
crucial to morphogenesis and tissue homoeostasis, too This article traces the changing focuses and methods of
much apoptosis may impede biological functions and is apoptosis research and describes three temporal phases for
implicated in certain degenerative diseases such as Alz- the field, beginning in the mid-nineteenth century. The first
heimer disease. Because of the importance of the subject, in phase lasted from the mid-nineteenth century to the 1930s.
recent years, research projects to understand and The period brought about a number of histological
manipulate apoptosis have attracted considerable funding, observations of cell death whose morphological changes
were similar to what later became known as apoptosis. The
eLS subject area: Science & Society second phase spans from the 1940s to the mid-1970s. With
the advent of higher resolution microscopes and utilisation
How to cite: of specialised dyes, researchers extensively recorded and
Jiang, Lijing (June 2012) History of Apoptosis Research. In: eLS. studied the morphology of apoptotic cells, leading to the
John Wiley & Sons, Ltd: Chichester.
introduction of the term ‘apoptosis’ in 1972. Research in
DOI: 10.1002/9780470015902.a0023954
this phase was not only morphological, but also began to

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History of Apoptosis Research

question the functions and mechanisms of apoptosis. The philosophical reasons. Technologically, the limited reso-
third phase features the biochemical and molecular study lution of microscopes and histological stains could only
of apoptosis and runs from the late 1970s to the present. In reveal coarse granular patterns. It was tedious and difficult
this period, scientists elucidated various biochemical to reconstruct the whole sequence of morphological change
changes accompanying apoptosis, and discovered a num- involved in apoptotic cell death from glimpses of histo-
ber of gene products that initiate, encourage, prevent or logical sections in which structures of cells were often dis-
inhibit apoptosis. As many molecules that regulate apop- torted. In fact, many embryologists regarded the granules
tosis turned out to be evolutionarily conserved and to be as experimental artefacts generated from poor slide prep-
implicated in diseases, the research on apoptosis under- aration. Philosophically, the notion that death might
went rapid expansion in the early 1990s. The significance of happen in these developing or living organisms just did
apoptosis research has been recognised in many ways in not seem right, since life was conventionally defined
this period, including the awarding of the 2002 Nobel as the absence or resistance of death (Glücksmann, 1951).
Prize in Physiology or Medicine to three scientists who See also: History of Developmental Biology; History of the
contributed to the knowledge about apoptosis in the Optical Microscope in Cell Biology and Medicine
nematode Caenorhabditis elegans (Horvitz, 2003). See also: During the first phase that introduced the idea of cell
Cell Death in C. elegans death, research on apoptotic cell death remained isolated
and conceptually undeveloped. As a consequence, many of
the early investigators did not follow up their initial
observations. Without clearer definitions of the phenom-
Phase I: Early Histological Descriptions enon of cell death and understandings of how it occurs, the
of Cell Death occasional efforts to discuss the function or mechanism of
cell death remained little more than speculation.
From the mid-nineteenth century through the early twen-
tieth century, scattered histological observations of cell
death were reported in a variety of tissues and organisms
and in different developmental stages. This included espe- Phase II: Morphological and
cially regulated cell death in metamorphic insects and Functional Study of Apoptosis
amphibians. These early morphological descriptions often
mentioned a kind of granules visible in the histological Programmed cell death in development
section as a sign of cell death. These granular patterns were
later identified as condensed chromatin, a characteristic of Beginning in the 1940s, experimental embryologists often
apoptosis (Majno and Joris, 1995; Clarke and Clarke, unexpectedly encountered apoptotic cell death when
1996). investigating how cells divide and differentiate to form
One of the earliest reports about naturally occurring cell certain tissues and organs. With improved dyes that
death emerged soon after botanist Matthias Schleiden and selectively stain certain types of cells, biologists eventually
physiologist Theodor Schwann formulated the cell theory established cell death as a real phenomenon and started to
by around 1839. In 1842, German histologist Carl Vogt ask questions about why and how cells die at various times
reported about cell death in a monograph that described his during development.
microscopic study of cellular activities throughout the life Some of these discoveries surprised researchers, going
cycle of midwife toads. Talking about the process of against common beliefs about how development occurs.
amphibian metamorphosis when the anuran notochord Cell death observed in development offered puzzles that
began to be replaced with vertebrae, Vogt described the needed to be explained and challenged the established view.
notochord cells as being ‘resorbed,’ ‘destroyed’ or ‘dis- Viktor Hamburger and Rita Levi-Montalcini’s discovery
appearing’ (Clarke and Clarke, 1996). See also: History of of neuronal cell death during the development of the chick
Cell Biology; Schleiden, Matthias Jacob; Schwann, Theo- central nervous system was one such serendipitous inves-
dor Ambrose Hubert tigation that challenged existing ideas and led to a new
Cell death was also reported in many other biological understanding of cell death and development. See also:
processes, such as in endochondral ossification, ovarian Apoptosis in Developmental Processes; Levi-Montalcini,
follicles, neuronal development and tissue turnover. Rita
Because these reports were sporadic and isolated, authors In the early 1930s, the German embryologist Viktor
often gave new names to the cell death phenomena they had Hamburger arrived at the University of Chicago to study
seen. The variety of these names, such as ‘coagulation the development of chick nervous system with techniques
necrosis,’ ‘autolysis,’ ‘pyknosis,’ ‘karyolysis’ and ‘chro- of classical experimental embryology such as extirpation
matolysis,’ although descriptive, probably have prevented and transplantation. He found that if he removed the chick
scientist from recognising the shared characteristics of wing bud on one side of the developing embryo, the size of
these phenomena (Majno and Joris, 1995). the neuron columns would decrease on that same side.
The many terms attest to the fact that cell death was not Following his advisor Hans Spemann’s influential concept
yet clearly conceptualised for both technological and of organiser and induction, Hamburger suggested that the

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History of Apoptosis Research

growing wing bud might send out inductive signals to Morphological definition of apoptosis
stimulate the growth of central neurons. The side with the
missing wing bud would lack such signals, resulting in the The term apoptosis solidified in the early 1970s from a
diminished size of the neuron columns (Hamburger, 1934). collaboration of three pathologists who examined cell
See also: Spemann, Hans death in ischaemic livers and chemically exposed adrenal
More than a decade later, around 1946, Hamburger cortices. Having observed cell fragments resulting from
encountered a paper published in Italian that addressed the dying cells using histochemical methods in the early 1960s,
same question. There the author Rita Levi-Montalcini the Australian pathologist John FR Kerr started to use
described development of central neurons not as inductive electron microscopy to investigate the morphological
growth of cells, but as a process of surplus growth of neu- changes of these cells. Kerr initially called the mode of cell
rons, followed by massive cell death. Hamburger soon death he saw ‘shrinkage necrosis’ (Kerr, 1971).
invited Levi-Montalcini to co-investigate the issue at the Around that time, two other pathologists working at the
Washington University at St. Louis, where he had moved. University of Aberdeen, Sir Alstair R Currie and Andrew
Hamburger and Levi-Montalcini eventually confirmed the H Wyllie found a similar kind of cell death in the inner
‘large-scale, localised and patterned degeneration pro- adrenal cortices of rats exposed to carcinogens. They
cesses,’ that is, cell death, in the normal development of invited Kerr to come to Aberdeen in 1970 to compare their
chick nervous system. They published the result in 1949 results. There they not only confirmed the morphological
(Hamburger and Levi-Montalcini). Their finding about changes of the cell death they had independently observed
the important role of cell death in development exposed were identical, but also discovered similar cell death phe-
the limitations of the Spemann school’s approach to nomena in the regression of rat breast carcinoma following
development. As historian Allen (2004) has pointed out, the removal of ovaries. Kerr, Currie and Wyllie eventually
the paradigm of induction was ‘a context in which naturally realised that programmed cell death had been known
occurring cell death was simply not part of the picture’. among embryologists. After confirming that the cell deaths
American biologist John W. Saunders was similarly in injured tissue, tumours and during development went
surprised when he tried to observe cell activities in the through parallel morphological steps, the three path-
developing chick wings while working at Marquette Uni- ologists became convinced that the cell death is a con-
versity around 1960. The dye Saunders used, Nile Blue, served, pivotal cellular process important for diverse
could stain living cells without interfering with normal biological conditions.
cell activities. Saunders found that some of the cells in Kerr et al. (1972) coined the term apoptosis to define an
the developing chick wing became an unusual dark colour active, inherently programmed cell-deleting mechanism
when being stained with Nile Blue. Initially taking these with distinct patterns of morphological changes. The
cells to be pigment cells, Saunders eventually realised Greek word apoptosis describes the shedding of leaves from
that they were going through shrinkage and degeneration, trees, or petals from flowers, was suggested by James
thus condensing the Nile Blue to higher concentrations Cormack, a professor of Greek language at the University
within the cells. In other words, these cells were going of Aberdeen. The term metaphorically captures the sig-
through the process of death and he was watching it hap- nificance of apoptosis in multicellular organisms: it plays
pen. Intrigued, Saunders started to investigate the patterns an opposite, but complementary role to that of mitosis to
and roles of apoptosis in chick wing and digit development regulate cell populations.
and became a pioneer of apoptosis research (Saunders Kerr et al. (1972) described the common morphological
et al., 1962). changes in apoptosis with the aid of one diagram, four
Meanwhile, American insect physiologist Richard A. histological staining pictures, and 20 electron microscope
Lockshin was observing the way pupal muscle structures micrographs (Figure 1). The whole sequence of apoptotic
disappear after completion of the adult development in cell death was divided into two stages. In the first stage, the
large American silkmoths. His 1964 study of the process of nucleus and cytoplasm show considerable condensation
intersegmental muscle breakdown was credited as the first and fragmentation. The cell membranes protrude and
to propose the term ‘programmed cell death’ (Lockshin extend to form blebs, which eventually separate from the
and Williams, 1964). With more and more observations cell and become what the authors called ‘apoptotic bodies’.
and discussions adding to the list of occasions in which cells In the second stage, these apoptotic bodies are engulfed and
seem to die for a biological purpose, biologists started to digested by the neighbouring cells. Following the mor-
recognise cell death as an important and conserved process phological description, the authors enumerated the
to maintain cell number and carve out certain structures. occurrences of apoptosis in a wide range of biological
Several critical reviews of this second period summarised processes, such as the formation of limbs, interdigital clefts,
and classified cell death phenomena. Some, such as lumina in tubular structures, the degeneration of phylo-
Glücksmann (1951) review in Biological Reviews and genetic vestiges and in pathological processes such as in
Saunders (1966) review in Science, were later recognised as teratogenesis, malignant tumours, tumour regression and
important milestones within the history of apoptosis in injured organs and tissues. At the end of the article, the
research. See also: The Siren’s Song: This Death That authors called for extensive further biological and bio-
Makes Life Live medical research on apoptosis. See also: Cancer

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History of Apoptosis Research

Parenchymal cells

Condensation

Separation

Fragmentation

Phagocytosis

Autolysis
Lysosomal
digestion

Residual body

′Histiocyte′

Figure 1 A diagram describing the morphology of apoptosis. Adapted from Kerr et al. (1972), with permission from Nature Publishing Group (hyperlinked
to http://www.nature.com/bjc/index.html).

Although its publication receive little recognition for Phase III: Molecular Study of
more than a decade, in retrospect Kerr et al.’s 1972 paper
clearly defined apoptosis, stated the significance of the
Apoptosis
phenomenon and pointed out the work needed for possibly Biochemical signatures of apoptosis
establishing a field of apoptosis research. Thus the paper
itself became an anchor for later researchers to perceive The rapid development of analytical tools for biochemistry
apoptosis research as a coherent field with its own agenda. and molecular pathways in the late twentieth century
It has been widely cited since the mid-1980s (Garfield and transformed the way apoptosis was studied. In the 1960s
Melino, 1997). and the 1970s, before the spread of recombinant DNA

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History of Apoptosis Research

technology, many projects attempting to elucidate the a 3h MN 5h MN


process of apoptosis were biochemical. As early as the mid-
1960s, researchers showed that apoptosis, such as cell death
in the tadpole tails, requires synthesis of new ribonucleic
acids (RNAs) and proteins. This reconfirmed biochemi-
cally that apoptosis is a biologically active process, rather
than a passive reaction to adverse environmental con-
ditions (Tata, 1966).
An important biochemical revelation in the 1970s was
that the chromosomes within apoptotic cells break into
segments composed of integral units of nucleosomes.
Therefore, the dying cells’ DNAs can produce a ladder-like
pattern when they are separated by mass and visualised by
DNA dyes. This feature was first discovered in 1974, when
three researchers at Harvard University showed that
human and rodent cells had characteristic patterns of DNA
degradation when treated with agents that triggered

Base pairs
apoptosis. The 1974 experiment separated the resulting
DNA segments with an alkaline sucrose gradient techni-
que, which could only give rough estimates of molecular
weight (Williams et al., 1974). In 1980, Wyllie found that
such DNA degradation patterns were associated with the
simultaneous condensation of chromatin within the
nucleus, a morphological change characteristic of apop-
tosis. In addition, Wyllie ran the DNA molecules with
agarose gel electrophoresis that could measure molecular
weight of with higher resolution. He identified the differ-
ence between adjacent DNA segments on the gel as
approximately 180 base pairs (bp), which equals to the
length of a nucleosome (Wyllie, 1980). This showed that
chromosomes break into nucleosomal fragments during
apoptosis and suggested that apoptosis involves activation
of endonuclease, a type of enzyme that cuts DNA mol-
ecules from within at specific sites. The pattern of DNA
degradation that produces multiples of 180–200 bp was
later known as the ‘DNA ladder,’ the first widely used Figure 2 The ‘DNA ladder’ produced with electrophoresis from DNAs of
biochemical marker for detecting apoptotic cells (Figure 2). apoptotic cells. Adapted from Wyllie (1980), with permission from Nature
See also: Apoptosis: Morphological Criteria and Other Publishing Group (hyperlinked to http://www.nature.com/).
Assays

Killer genes and protectors When Horvitz started working on the nematode
C. elegans in the late 1970s at the Laboratory of Molecular
With the rise of modern genetic techniques, especially the Biology led by Sydney Brenner in Cambridge, UK,
recombinant DNA technology in the 1980s, it became C. elegans was not yet established as a model organism.
feasible to identify gene products involved in apoptosis. Researchers still needed to figure out the basics about
Scientists discovered a number of molecules relevant to the worm’s developmental processes to study complex
apoptosis and tried to piece them together into apoptotic functions. One of the advantages of C. elegans is that
pathways. It became increasingly clear to scientists that developmental lineage of each of the 959 adult somatic cells
apoptosis involves integrating complex signals and initi- is invariant between individuals. Horvitz’s initial work on
ating well-regulated, multistep pathways. With the findings C. elegans was to piece together the complete lineage map
of a few apoptotic genes whose homologues play a role in of each somatic cell (Sulston and Horvitz, 1977). Working
carcinogenic process, links between the pathology of can- on the cell lineage, Horvitz knew that of the 1090 somatic
cer and apoptosis began to be recognised, facilitating the cells ever generated during the worm’s development, not all
expansion of apoptosis research to biomedical research. survived. A total of 131 somatic cells underwent apoptosis
Molecular biologist H Robert Horvitz’s study of apoptosis and died. Horvitz would eventually follow this line of
in C. elegans, which was recognised with a Nobel Prize in research and identify genes involved in apoptosis. See also:
2002, captured the excitement typical of the many fruitful Brenner, Sydney; Cell Death in C. elegans; Laboratory of
research programs in the 1980s and 1990s. Molecular Biology (LMB)

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History of Apoptosis Research

In order to figure out what genes code for important share of biomedical research from the early 1990s. As a
components in apoptotic pathways, Horvitz and his result, many investigators and biomedical companies have
graduate students induced mutations and tried to screen been working to design therapeutics to trigger apoptosis in
mutants with abnormal patterns of cell death. Because the tumour cells for effective cancer treatment. See also:
cells undergoing apoptosis are often quickly engulfed by Apoptosis: Molecular Mechanisms; Drug Discovery in
neighbouring cells, the apoptotic scenes are fleeting and Apoptosis; P53 and Cell Death; The BCL-2 Family
hard-to-catch, especially when the research group was Proteins – Key Regulators and Effectors of Apoptosis;
trying to process many mutants in a short time. To cir- Tumor Suppressor Genes
cumvent these challenges, Horvitz utilised a ced-1 mutant,
where the engulfment function is obliterated and the
apoptotic cell debris cannot be eliminated (ced stands for
‘cell death abnormal’). When mutants derived from ced-1
had excessive or too little cell debris at the sites where cell
Current Understanding about
death normally occur, researchers could capture these Apoptosis
changes under Nomarski optics and isolate them as
mutants with abnormal cell death patterns (Hedgecock The current molecular interpretation depicts apoptosis as
et al., 1983). Based on ced-1, a graduate student Hilary M involving a cascade of energy-dependent cellular signalling
Ellis generated a mutant worm in which no cell debris could pathways and activations of caspases. The signals that
be found. The following research showed that all 131 cells trigger apoptosis can be toxins, hormones, radiation,
that would normally die survived in the mutant, indicating hypoxia or damaged DNAs. Different signals often trigger
that an essential gene for normal apoptosis was altered. different sets of caspases, but eventually activate a common
Horvitz named the gene ced-3 (Ellis and Horvitz, 1986). ‘execution pathway’ that leads to the degradation of DNAs
Another essential gene for apoptosis, ced-4, was soon and proteins in the nucleus, and to the condensation of the
identified using similar methods. cytoplasmic components (Elmore, 2007). See also: Apop-
In the early 1990s, the advent of recombinant DNA tosis: Molecular Mechanisms
technology and modifications to make it work in a variety Although the many molecules and pathways discovered
of organisms enabled scientists to sequence and clone both already have helped scientists to appreciate the complexity
ced-3 and ced-4 (Yuan and Horvitz, 1992; Yuan et al., involved in apoptosis, they have also created challenges for
1993). Researchers used these sequences to search on-line understanding exactly how apoptosis should be defined. In
databases of genes and proteins, and eventually found that particular, how should apoptosis be defined and differen-
the CED-3 protein is similar to a protease in humans called tiated from other kinds of cell death? What biochemical
ICE (interleukin-1-b-converting enzyme). CED-3 and ICE and molecular process are unique in apoptosis? In fact,
later proved to belong to the family of caspase, a group of some researchers express philosophical objections to the
cysteine protease that are essential for the activation and use of the term apoptosis, suggesting that the concept is a
execution of apoptosis (Grütter, 2000). See also: Caspases human construct which cannot reflect the complex pro-
and Cell Death; Caspases, Substrates and Sequential cesses that defy unified definitions (Sloviter, 2002). To
Activation; DNA Sequence Analysis address this issue, the Nomenclature Committee on Cell
The most important homology between human genes Death was established in 2005. The committee attempted
and apoptotic genes in C. elegans for the expansion of to normalise terms used in cell death research by publishing
apoptosis research, however, do not come from what recommendations, which they did twice, in 2005 and 2009,
Horvitz called ‘killer genes’ such as ced-3 and ced-4, but respectively (Kroemer et al., 2009).
from a gene that prevents cell death, ced-9, a ‘protector’.
Ced-9 was found to function against ced-3 and ced-4, pre-
venting cells from initiating apoptosis. Around 1994, when References
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