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Bernard R. Glick
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Modulation of plant ACC and ethylene levels by ACC deaminase-producing bacteria View project
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Abstract
The removal from the environment of many potentially toxic compounds is complicated
by the numerous classes and types of these chemicals. For example, many soils are
contaminated with one or more metals, radioactive or inorganic compounds. Of these, the
metals may include lead, zinc, cadmium, selenium, chromium, cobalt, copper, nickel and
mercury; the radioactive compounds may be uranium, cesium or strontium; and the other
0734-9750/03/$ - see front matter D 2003 Elsevier Inc. All rights reserved.
doi:10.1016/S0734-9750(03)00055-7
384 B.R. Glick / Biotechnology Advances 21 (2003) 383–393
inorganic compounds might include arsenic, sodium, nitrate, ammonia or phosphate. Soil
may become polluted with high concentrations of metals by either a natural phenomenon
such as proximity to an ore body, or as a consequence of industrial activities. The reme-
diation of heavily metal-contaminated soils often involves excavation and removal of soil to
‘‘secured’’ landfills, a technology that is expensive and requires site restoration. As an al-
ternative, in the past few years, several groups of scientists have begun to develop tech-
nological approaches to using certain plants to remove metal contaminants from the soil.
In addition to the above-mentioned inorganic compounds, soils and water systems may
also be contaminated with organic compounds including chlorinated solvents like
trichloroethylene; explosives such as trinitrotoluene (TNT) and 1,3,5-trinitro-1,3,5-hex-
ahydrotriazine (RDX); petroleum hydrocarbons including benzene, toluene and xylene
(BTX), polyaromatic hydrocarbons (PAHs); and pesticides such as atrazine and bentazon.
While many of these compounds can be metabolized by some soil bacteria, this process is
usually slow and inefficient, in part as a consequence of the relatively low numbers of
these degradative microorganisms in soil. However, there is mounting evidence that the
biodegradation of recalcitrant organic compounds in the soil is enhanced around the roots
of plants.
associated with biological and environmental stresses, and pathogen attack (Morgan and
Drew, 1997)—in plants grown in the presence of ACC deaminase-containing plant
growth-promoting bacteria. The deleterious effects of flooding on tomato plants (Grichko
and Glick, 2001) were decreased and the shelf life of the petals of ethylene sensitive cut
flowers was prolonged following treatment with ACC deaminase-containing plant growth-
promoting bacteria (Nayani et al., 1998). Moreover, biocontrol strains of bacteria carrying
ACC deaminase genes were able to more effectively protect plants against various
phytopathogens: cucumber plants were protected against Pythium damping-off, and potato
slices, exposed to Erwinia caratovora in a small sealed bag, were protected against
Erwinia soft rot (Wang et al., 2000). In addition, canola seedlings grown in the presence of
high levels of nickel, produced much less ethylene when the seeds were inoculated with an
ACC deaminase-containing nickel-resistant plant growth-promoting strain that (Burd et
al., 1998). It appears that the ‘‘stress ethylene’’ produced in each of these situations, and
the damage caused by it, was reduced by the activity of ACC deaminase that lowered the
level of ethylene produced by the plant.
4.1. Metals
While plants grown on metal contaminated soils might be able to withstand some of the
inhibitory effects of high concentrations of metals within a plant, two features of most plants
could result in a decrease in plant growth and viability. That is, in the presence of high levels
of metals, most plants (i) synthesize stress ethylene and (ii) become severely depleted in the
amount of iron that they contained. Moreover, plant growth-promoting bacteria may be used
to relieve some of the toxicity of metals to plants. This could occur in two different ways. As
indicated earlier, the use of ACC deaminase-containing plant growth-promoting bacteria
would be expected to decrease the level of stress ethylene in a plant growing in soil that
contained high levels of metal. In addition, plants are able to take up and utilize complexes
between bacterial siderophores and iron. Plant siderophores bind to iron with a much lower
affinity than bacterial siderophores so that in metal contaminated soils a plant is unable to
accumulate a sufficient amount of iron unless bacterial siderophores are present.
Our primary objective was the development of a phytoremediation system that could be
used to help to remove nickel from soil as inexpensively and as quickly as possible. Prior
to this work, there were reports in the scientific literature that indicated that Brassica
juncea (Indian mustard) was a nickel-hyperaccumulating plant and could be used for this
purpose. However, preliminary laboratory experiments indicated that the growth of Indian
mustard, and the related plant Brassica campestris (canola), which could also accumulate
high levels of nickel and other metals, was significantly inhibited by the presence of
moderate amounts of nickel in the soil. In an effort to overcome the inhibition of plant
growth by nickel, a bacterium was isolated from a nickel contaminated soil sample; the
bacterium was (i) nickel-resistant, (ii) able to grow at the cold temperatures (i.e., 5– 10 jC)
that one expects to find in nickel contaminated soil environments in Canada and (iii) an
active producer of ACC deaminase (Burd et al., 1998). In total, there were approximately
388 B.R. Glick / Biotechnology Advances 21 (2003) 383–393
4 103 nickel-resistant bacteria per gram dry weight of soil, or about 1% of the total
bacterial population that was culturable on Tris-buffered low-phosphate medium. In order
to isolate plant growth promoting bacteria, all of the nickel-resistant isolates were tested
for the ability to grow on minimal medium with ACC as the sole source of nitrogen (Glick
et al., 1995). Approximately 7% of the nickel tolerant strains also had the ACC+
phenotype. Finally, nickel-resistant bacterial strains that were also able to grow on ACC
were tested for the ability to produce siderophores. Based on the idea that bacterial
siderophores might facilitate the uptake of iron by plants, the best siderophore producing
strain (designated SUD165) was selected for subsequent study. This strain was charac-
terized by fatty acid analysis as Kluyvera ascorbata. In laboratory tests, it was ascertained
that K. ascorbata SUD165 not only had the above-mentioned traits but could also promote
plant growth in the presence of high levels of nickel (Burd et al., 1998; Ma et al., 2001). At
all levels of nickel tested (i.e., 1 – 6 mM Ni2 +), using both a low and a high level of
bacterial cell treatment (cell suspension absorbance at 600 nm of 0.025 or 0.50), with both
canola and tomato plants, with both roots and shoots, and both in gnotobiotic growth
pouches and in pots with soil, the addition of K. ascorbata SUD165 significantly
decreased the toxicity of the added nickel. Moreover, the protective effect of K. ascorbata
SUD165 increased as the density of the cell suspension increased. While the bacterium K.
ascorbata SUD165 did not change the amount of nickel taken up per milligram dry weight
of either roots or shoots and thus had no influence on amount of nickel accumulated by the
plant, it did lower the amount of ethylene that was evolved by plants treated with nickel in
comparison to treat with nickel in the absence of the bacterium. The simplest explanation
of the data is that the bacterium protects the plant against the inhibitory effects of nickel-
induced stress ethylene formation.
To improve the performance of K. ascorbata SUD165, the bacterium was grown on a
minimal medium that did not contain any measurable iron. Of the tens of thousands of
bacteria plated, only a few colonies were able to grow under these conditions. It was
reasoned that these bacteria probably contained a spontaneous mutation that caused the
overproduction of the bacterial siderophores. This siderophore overproduction enabled the
bacterium to sequester a sufficient amount of iron, even though the iron was present at
extremely low levels, to permit these bacteria to grow. The amount of siderophores
produced by each spontaneous mutant was quantified and the strain that produced the
highest level of siderophores (about 100-fold more than the wild-type) was designated K.
ascorbata SUD165/26 and selected for additional study (Burd et al., 2000).
When the wild-type bacterium and the siderophore overproducing mutant were tested
in the laboratory, as expected both of them were observed to promote the growth of
tomato, canola and Indian mustard plants in the presence of inhibitory levels (generally 2
mM) of nickel, lead or zinc. In addition, the siderophore overproducing mutant decreased
the inhibitory effect of the added metal on plant growth significantly more than the wild-
type bacterium. Heavy metal contamination of soil is often associated with iron-deficiency
in a range of different plant species (Mishra and Kar, 1974). The low iron content of plants
that are grown in the presence of high levels of heavy metals generally results in these
plants becoming chlorotic since iron deficiency inhibits both chloroplast development and
chlorophyll biosynthesis (Imsande, 1998). Moreover, iron deficiency causes the plant to
synthesize stress ethylene.
B.R. Glick / Biotechnology Advances 21 (2003) 383–393 389
Once they have bound iron, microbial iron-siderophore complexes can be taken up by
plants and thereby serve as an iron source for plants (Bar-Ness et al., 1991). It was
therefore reasoned that the best way to prevent plants from becoming chlorotic in the
presence of high levels of heavy metals was to provide them with an associated
siderophore-producing bacterium that could provide a sufficient amount of iron to the
plant. Taken together, these results suggest a dual role for bacteria that facilitate plant
growth in the presence of heavy metals. On the one hand, the bacteria lower the level of
stress ethylene in the plant thereby allowing the plant to develop longer roots and thus
better establish itself during early stages of growth (Burd et al., 1998; Glick et al., 1998).
On the other hand, once the seedling is firmly established in the soil, the bacterium helps
the plant to acquire sufficient iron for optimal plant growth, in the presence of levels of
heavy metals that might otherwise make the acquisition of iron difficult (Burd et al., 2000).
When the siderophore overproducing mutant was tested in the field with soil that had
been contaminated with nickel over a period of many years, it was observed that both the
number of Indian mustard seeds that germinated in the nickel-contaminated soil, and the
size that the plants were able to attain was increased by 50 –100% by the addition of the
bacterium to the soil. While additional laboratory and field testing of the selected
bacterium is necessary, at this stage, the data look sufficiently promising to consider
commercialization.
4.2. Arsenate
bacterial strain, in addition to ACC deaminase activity, may contribute to this result—the
bacterium synthesizes IAA, siderophores and antibiotics, all of which may stimulate plant
growth. In this regard, antibiotic-secreting plant growth-promoting bacterial strains can
inhibit the proliferation and subsequent invasion of phytopathogens, hence protecting
plants, already debilitated by arsenate in the soil, from further damage.
When biomass is considered in calculating the arsenate accumulation, each transgenic
canola plant accumulates approximately four times as much arsenate, on a dry-weight
basis, as non-transformed canola. The higher rate of germination of transgenic canola also
contributes to the total amount of arsenate accumulation. The significant increase of
arsenate accumulation made by transgenic canola in conjunction with plant growth-
promoting bacteria makes phytoremediation much more efficient. However, despite the
improved performance of transgenic versus wild-type canola, it is unlikely that this result
can be the basis of a large-scale process that is useful for the phytoremediation of arsenate
contaminated soils.
5. Conclusions
Although phytoremediation has received considerable attention recently, and there are
an increasing number of reports suggesting that it should become the technology of choice
for the clean up of various types of environmental contamination, this technology is still in
its infancy and it has yet to be used commercially to any extent. Nevertheless, it is
predicted to account for approximately 10 – 15% of the growing environmental remedia-
tion market by the year 2010. However, to realize the full potential of this technology, it is
necessary for plants to grow as large as possible in the presence of various environmental
contaminants. One way to achieve this goal is to utilize plant growth-promoting bacteria to
facilitate the growth of the plants used for phytoremediation.
Acknowledgements
Work from the author’s laboratory was supported by grants from the Natural Science
and Engineering Research Council, CRESTech (a province of Ontario Centre of
392 B.R. Glick / Biotechnology Advances 21 (2003) 383–393
Excellence) and Inco. The following individuals contributed to the work reviewed here:
Genrich Burd, Donna Penrose, Varvara Grichko, Lin Nie, George Dixon, Wenbo Ma,
Bruce Greenberg, XiaoDong Huang, Jiping Li, Saleh Shah and Cheryl Patten.
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