Professional Documents
Culture Documents
NOCTILUCENT CLOUDS
G E Thomas, University of Colorado, Boulder, CO, USA their late-nineteenth-century appearance may have
Copyright 2003 Elsevier Science Ltd. All Rights Reserved. been the debut of a new effect, a result of anthro-
pogenic influences (to be described later).
Through the method of triangulation, Otto Jesse,
Introduction Tserassky and others determined that NLCs are the
Noctilucent, or ‘night luminous’, clouds are the highest clouds on earth, located at a mean height of
highest and coldest clouds on earth. Occupying a 8275 km. NLCs (in German: leuchtende nachtwol-
narrow height zone near the high-latitude mesopause ken; in Russian: serebristykh oblakov) are important
region (80–85 km), they occasionally offer a splendid in the history of atmospheric science, as they provide
sight during northern summer twilights (Figure 1). proof that the atmosphere extends to much greater
Their almost phosphorescent appearance against a heights than previously imagined. It was established
darkened sky is due to the fact that at these extreme quite early that the appearance of NLCs is quite
heights, they are still fully illuminated by the sun. In sporadic, varying from location to location and from
the latitude zone 50–651, the upper air remains fully day to day. In addition, because many locations at
illuminated throughout the night while the lower these latitudes have poor observing conditions (rain
atmosphere is in comparative darkness. Since meso- and overcast skies), it was deemed important to
spheric clouds are too faint to be seen during daytime, establish a network of geographically dispersed ob-
and their detection can be confused by ordinary servers. Reports from widely varying locations could
tropospheric clouds during twilight, their occurrence thus determine the spatial extent and motions of
only at solar depression angles between 61 and 161 mesospheric clouds from night to night. It was hoped
(Figure 2) is crucial to their identification. Northern by organizers of the early observing networks (such as
noctilucent clouds (NLCs) have their southern coun- Paton in Scotland and Khostikov in the USSR) that
terpart occurring in similar latitudes and times during such systematic sightings would provide information
the austral summer. about the dynamical and thermal conditions of the
upper atmosphere. While many thousands of detailed
observations (both visual and photographic) describ-
ing NLC appearance, brightness, and drift velocities
Brief History have been collected since the 1920s, the early expec-
NLCs were first recognized as an upper atmospheric tations were never realized. We now understand that
phenomenon in the summer of 1885, when observers observations of the apparent drift motion of clouds
throughout western Europe, Great Britain, and Russia were the result of phase motions of atmospheric waves
reported unusual cloud displays enduring past mid- rather than that of the underlying winds. In addition,
night. TW Backhouse and VK Tserassky share credit the absence of any substantial information on the
for their ‘discovery’, although it is not suspected that physical conditions in the upper mesosphere made it
Figure 1 Photograph of an NLC. Taken on 13/14 July 1983 2140 UT (about 2300 h local time). Camera details: f/2, 50 mm lens,
Kodachrome K64 film, exposure unknown (probably about 30 s).
1408 NOCTILUCENT CLOUDS
temperature is much lower at the summer poles than at The two-level structure of the mesopause region is
the winter poles. This behavior is opposite to that of particular interest. It has been proposed that two
occurring in the lower atmosphere, where summer air mesopause ‘states’ exist: the regular mesopause at
is warmer than winter air. This anomaly is now about 100 km and the summer mesopause at about
understood to be the result of a general upwelling of air 88 km. The regular mesopause occurs throughout the
into the summer hemisphere (and a downwelling in globe during the nine non-summer months, and year-
wintertime), caused by the deposition of wave mo- round in the tropics. It has a nearly constant temper-
mentum. An additional benefit to summertime cloud ature of 180 K. In contrast, the summer mesopause
formation is that more moisture and seed particles temperature occurs only at midlatitudes up to the
(deposition nuclei) are transported upward from the pole, and varies considerably in height with latitude
moister stratosphere into the summertime mesopause (Figure 3). NLCs occur in the cold high-latitude
region. portions of the summer mesopause, where mean
The full extent of the mesospheric cloud layer was temperatures fall below 145 K during several months
not revealed until the space age. As mentioned around the June and December solstices. As described
above, NLCs cannot be observed north of the by a model simulation, Figure 4 summarizes this
Arctic circle because of the ‘white nights’ pheno- behavior in schematic form. It must be noted that, at
menon during summer. In 1969, satellite-borne in- any given instant, waves may severely alter the
struments revealed a daytime mesospheric layer temperature profile to such an extent that the meso-
that extended to the geographic pole. The presence pause itself may be hardly recognizable.
of this much thicker and more pervasive mesospheric
cloud layer (today known as polar mesospheric
clouds (PMCs)) meant that the phenomenon is essen- Saturation as a Necessary Condition
tially circumpolar, with the densest clouds at the for Clouds
geographic pole. Despite the two different acronyms Water-ice particles occur in the atmosphere as a result
(NLC and PMC), there is no evidence for any inherent of the ice surface temperature falling below the frost
differences between the two phenomena. NLCs point Tf. The value of Tf depends on (a) the amount of
are now understood to be the thinner and spatially water vapor present w, the volume mixing ratio; and
patchy boundary region of PMCs. Although the (b) the total atmospheric pressure p, according to the
situation is undoubtedly more complicated, NLCs formula
are analogous to icebergs, which have ‘broken off’
from the main body and possibly ‘drifted’ down to Tf ¼ 6077:4=½37:759 lnðwÞ lnðpÞ
lower latitudes.
Atmospheric waves launched upward by distur- where w is expressed in parts per million (ppmv) and p
bances in the lower atmosphere (e.g., storm fronts) is in hectopascals (more conventionally known as
and by the diurnal variation of solar heating millibars). A nominal range of values of w appropriate
have a profound influence on both the environment to NLC heights is 271 ppmv. p is a strong function of
of mesospheric clouds and the cloud particles height and is about 0.0004 mbar at 84 km. For the
themselves. These so-called gravity waves (or buoy- above range of w, Tf is 14272 K. As shown in Figures
ancy waves) and atmospheric tides affect the thermal 3 and 4, the condition for ice existence is satisfied for
and dynamical state of the summertime mesosphere. mean summertime conditions at, for example, 691 N
In their upward passage through the progressively but not at 541 N. Despite the lack of saturation in the
thinner air, the waves attain larger and larger mean state, NLCs actually occur somewhat farther
amplitudes. Due to the filtering action of the under- south. These occasional forays into sub-Arctic lati-
lying seasonally varying winds, the waves that tudes is explained by cold fluctuations in temperature,
reach the mesopause also vary seasonally in their which temporarily saturate the atmosphere. Ice crys-
east–west direction. In the 80–120 km region they tals will then form and grow until the next warm
break down into turbulence, in a similar fashion to episode, when the ice crystals quickly ‘evaporate’
ocean breakers on a beach. The absorption of these (more accurately sublimate). Since the theoretical
waves causes air to be accelerated westward in growth rate depends on the uncertain amount of water
summer and eastward in winter. This seasonal accel- vapor (water in the gaseous phase) available for ice
eration of the winds causes a chain of events, among formation, it is preferable to use observations to
them an upward lifting/cooling of the air in summer, a determine whether waves enhance or destroy ice
summer-to-winter – circulation, and a sinking/warm- particles. There is limited evidence that waves have
ing in winter. Typical wave structure in NLCs is an overall destructive influence on the brightness of
apparent in Figure 1. NLCs.
1410 NOCTILUCENT CLOUDS
Temperature (K)
98 km
170
180
160 41°
90 150
Altitude (km)
160 54°
130
Frost-point 69°
180
140 140
150
80 170 160
170
120
180 0 2 4 6 8 10 12
20 (A)
0
200
Month
70 105
110 160 210 260
(A) Day number
100
Zonal mean temperature (K), day 170
Altitude (km)
100 200
95
180
170 90
160
1500
14 0
13 85
90
Altitude (km)
200
80
0 2 4 6 8 10 12
0
(B) Month
18
80 17
0
160
180 105
200
100
200 220
70
Altitude (km)
0 30 60 90 95
(B) Latitude (deg)
(typically a few nanometers), the ice particles may be ing particles and/or water vapor into the stratosphere.
sufficiently numerous to scavenge the ionosphere of its (The 2-year time lag is consistent with model calcu-
local electron content, at least in narrow layers. Since lations for the interval needed to transport material
meter-scale irregularities in the electron density (more from the middle stratosphere to the mesosphere.) The
correctly index of refraction) produced by turbulence atmosphere eventually cleansed itself of this material,
are responsible for radar wave reflections, ice particles and NLCs declined toward the end of the century.
are thus indirectly responsible for the very strong radar However, NLCs reappeared during the early twentieth
echoes reflected from the cold summertime mesopause century, despite the absence of large volcanic erup-
region (the PMSE phenomenon, mentioned above). tions. The twentieth-century prominence of NLCs
Despite the fact that this theory is yet to be verified in may have been caused by increasing levels of water
detail, it seems to explain most of the observations. vapor, produced by increased concentrations of at-
The small particles believed to be responsible for mospheric methane (CH4). Chemical analysis of air in
PMSEs are invisible in the optical spectrum. It is ice bubbles trapped in the polar ice cores shows that
necessary for the particle size to exceed a fractional since the industrial revolution, CH4 concentrations
part (say about one-tenth)of the wavelength of light have more than doubled in the lower atmosphere.
before their cross-sections are large enough to be These molecules make their way upwards into the
visible through scattering of sunlight. The smallest stratosphere through upward transport by winds, and
wavelength at which mesospheric clouds have been are broken down by sunlight into hydrogen and
observed is in the ultraviolet at about 215 nm. Thus, carbon compounds. The hydrogen compounds even-
mean ice particles sizes must exceed B20 nm before tually are re-formed into water vapor through oxida-
they can be said to be qualify as mesospheric cloud tion reactions. A second source of upper atmospheric
particles. It is important to note that only a small water vapor is the amount that is transported upward
fraction (a few tens to a few hundred per cubic through the cold ‘barrier’ of the tropical tropopause. It
centimeter) of candidate particles actually grow to happens that most of the vertical exchange between
optically visible sizes. These ‘large’ ice particles (20– the lower troposphere and the stratosphere takes place
60 nm) are probably those which began their lives on at low latitudes, where the air is vigorously uplifted by
nucleating particles only slightly larger than their convection over the warm tropical oceans. However,
neighbors. Larger particles have lower surface ener- the tropical tropopause (at about 18 km) is extremely
gies Es , and because the rate of deposition is expo- cold, and freezes out nearly all the moisture from the
nentially dependent on Es , they compete much more ascending air. Thus the originally moist tropical air,
efficiently for the available moisture. once it makes its way into the mesosphere, is respon-
The above picture of the evolution of ice particles is sible for only about half of the miniscule water content
consistent with many observed properties of PMC/ of the mesosphere. The other half is attributed to the
NLC and PMSE. However, many details are still oxidation of CH4. Unlike H2O, this molecule does not
lacking. We still do not know the nature of the nuclei, freeze out in the tropopause ‘cold trap’. The H2O
the effective lifetimes of ice particles, their relationship mixing ratio is about 6–7 ppmv at 50 km, but at higher
to turbulence, how atmospheric waves influence the altitudes this amount is reduced to a few ppmv because
particles, how seasonal variations of water vapor and of destruction due to solar photodissociation.
temperature changes force the various cloud properties, The net result of the growth of anthropogenic
etc. Such questions are subjects of current research. In methane is that water vapor at all heights, and in
the following, we outline some of the ideas behind the particular near the mesopause, has increased by about
current interest in mesospheric clouds. 20–25% since 1885. According to a detailed model of
ice evolution, this small increase of water could have
caused a factor of 10 increase in the brightness of NLC
Long-Term Trends in NLCs: particles (Figure 5). This nonlinear behavior is ex-
plained by more particles being formed in a more
Atmospheric Methane Changes saturated environment, and, in addition, becoming
The first appearances of NLCs occurred 2 years after larger before being lost from the region. The latter
the great eruption (in 1883) of the Krakatoa volcano in factor is important because of the high sensitivity of
Java (now Indonesia). It was once thought that the the scattered brightness I of small particles to particle
1885 ‘discovery’ of NLCs was due to the increased radius r (IBr6). However, visual observations have
attention of observers of the volcanically perturbed revealed no obvious increases in the brightness of NLC
twilight skies. A recent alternate historical perspective displays over the past 30 years. Yet cloud numbers
advanced in 1989 held that the 1883 eruption had a have changed substantially over this time period. Since
transitory effect on NLCs, either by injecting nucleat- there were no quantitative measurements of cloud
1412 NOCTILUCENT CLOUDS
60
_1
10 40
Theoretical limb albedo, Al
N
45° (South SME)
20
_2
10
0
1970 1980 1990
135° (North SME) Year
_
10 3
Figure 6 Year-to-year variation in the number of nights, N, on
which noctilucent clouds were reported. Cloud sightings were all
made in north-western Europe.
10
_4 Long-Term Trends in NLCs:
120 122 124 126 128 130 132 134 Atmospheric Carbon Dioxide Changes
Mesopause temperature [K]
Another important factor in the evolution of the
Figure 5 Model calculations of UV albedo A1 as seen at the
mesopause temperature is increased carbon dioxide
atmospheric limb from space. A1 5 4pI1/F, where I1 is the scattered
limb intensity and F is the solar flux. The wavelength is 0.265 mm. (CO2). Rather than altering the chemistry of the
The model of ice formation and growth varies the mesopause mesosphere, the rather inert CO2 molecules change
temperature, holding all other variables (such as water vapor and the thermal environment because of their ability to
rate of eddy diffusion) constant. The two curves apply to the absorb and radiate infrared radiation. CO2 increases
scattering angles (angle between solar ray and scattered ray)
due to growing anthropogenic activity may be the
observed by the orbiting Solar Mesosphere Explorer (SME)
Ultraviolet Spectrometer Experiment. The SME mission observed main culprit in the observed 21C surface warming that
PMCs from 1981 to 1985 in both polar regions. has occurred over the past 25 years. More CO2 means
more downward emitted infrared radiation, thereby
brightness until the modern era, the methane hypoth- heating the surface. However, its increased radiation
esis remains a viable explanation for the slow rise in to space causes the upper air to cool. Thus, upper
prominence of NLCs in the twentieth century. How- atmospheric cooling appears to be a necessary accom-
ever, the CH4 hypothesis has difficulty in explaining paniment to lower-level atmospheric greenhouse
recent dramatic changes in NLC occurrence frequen- warming. Since 1885, CO2 has increased by about
cy. This is because of the glacial pace of expected 25%, from 300 to 370 ppmv. One recent model
methane-related water vapor increases (4% per dec- predicts that this increase should have caused a
ade). As shown in Figure 6, NLC numbers have more globally averaged cooling of 2.5 K. However, as
than doubled over the past 30 years, a rate that seems discussed below it is not clear that the high-latitude
to require an additional forcing mechanism. None- summertime mesopause has participated in a net
theless, it appears that NLCs are at least partially an cooling over the past century.
indirect result of anthropogenic alteration of the
atmosphere’s chemistry. The slow rise in CH4 abun-
dance is due to increased biological sources in rice
paddies, landfills, domesticated animals, etc., although
Interdecadal Changes in NLC
industrial sources, such as mining, have a small Figure 6 shows how the number of sightings of NLCs
influence. In fact, CH4 is a direct result of life on the have increased in recent decades. This plot shows the
planet. On a totally lifeless planet, otherwise similar to number of NLCs recorded per summer season by a
our own, there would be no CH4 at all. In a sense, NLC network of experienced observers from 1964 to 1997.
can be thought of as a product of life on Earth. The time series indicates both a periodic solar control
NOCTILUCENT CLOUDS 1413
of NLC (over an 11 year cycle of solar sunspot activity) Contours of cloud existence region
100 100
and an upward trend. Whether the periodic behavior is
due to the 11 year solar cycle is not clear – the times of
maximum sunspot activity were in 1958, 1969, 1980, 90 90
and 1991. Thus each solar maximum occurs about 2
Altitude (km)
5 4 3 2 1
years prior to the minimum in NLC occurrences. The
80 80
anticorrelation with solar UV irradiance (which is in
phase with sunspot activity) is not unexpected, but the
2 year time lag suggests a more complicated mecha- 70 70
nism than simple UV heating and water vapor disso-
ciation. An equally interesting trend is the upward
60 60
increase in the number of NLC sightings. This 30 40 50 60 70 80 90
indicates that NLCs have more than doubled since Latitude [°]
1964. This is despite the number of observers remain-
ing nearly constant over this time interval. Figure 7 Contours of ice-existence regions for five scenarios
(Table 1). The regions enclose air which is colder than the frost
What could have caused this dramatic increase in
point temperature (less 5 K).
NLC numbers since 1964? As mentioned previously,
CH4 oxidation can account for only a fractional part
of this change. Now that direct measurements of
mesospheric composition from satellites are available situation is expected to occur late in the twenty-first
over long time intervals, we know that the upper century. (This model predicts that the NLC region will
atmospheric water vapor in the past decade has participate in future cooling of the middle atmos-
undergone more complicated changes than expected phere.) The effects are to enlargen dramatically the
from the slow CH4 increase (currently 0.5% per year). saturation region from its current location at
The observed year-to-year variations in upper atmos- moderately high latitudes. Future NLCs could
pheric water vapor in the last decade may be due to occur on a regular basis as far Equatorward as 401
poorly understood alterations in the overall circula- latitude. A possible scenario is that NLCs could slowly
tion responsible for the exchange of air between the evolve to occupy a large fraction of the summertime
troposphere and the stratosphere/mesosphere. In ad- hemisphere. It should be kept in mind that the
dition, the observed changes of mesospheric temper- arguments above predict slow changes that are hardly
ature have been more dramatic than the models perceptible over a single human lifetime. Nature has a
predict. In fact, some data sets are now coming to way of disproving our theoretical scenarios. As
light which indicate that portions of the mid-meso- already mentioned, a large NLC occurred in the
sphere (B70 km) have cooled by more than 20 K in the western US in 1999, long before it was expected from
past 30 years. Assuming these data are reliable, there CO2 increases.
must have occurred important time-varying influences Although short-term effects are understood in terms
that are not captured in the current models. Although of low temperatures and wave perturbations, at the
the database for the mesopause temperature is not present time there is no consensus as to the principal
much longer than one 11 year solar cycle, the evidence ‘forcing agents’ or ‘drivers’ of long-term NLC activity.
from airglow measurements suggests only small Neither is there agreement on the nature and magni-
(o1 K/decade) long-term cooling rates occurring in tude of long-term trends in the thermal or composit-
the uppermost mesospheric region (87 km). It appears ional structure of the mesosphere. Whether NLC
that the trends themselves have important height and variability is due to changes in water vapor, temper-
latitude variations. There appears to be no ‘smoking ature changes, or some combination (or possibly some
gun’ responsible for the long-term changes in NLC other influences such as wave activity) is still un-
observations. The search continues for a viable known. More data are needed in this hard-to-access
mechanism. region over time scales of decades. The best hope for a
breakthrough in understanding this phenomenon is a
satellite mission making global observations of PMCs
and all the suspected forcing variables. NLCs are
Possibilities of Future Changes in
providing us with a coded signal that changes have
NLCs been underway in the upper atmosphere for some
With regard to future changes, the modeled increased time, are continuing today, and most likely will evolve
size of the ‘NLC existence region’ due to a doubled in the future with unknown consequences. Unfortu-
CO2/CH4 environment is shown in Figure 7. This nately, we have not yet ‘broken the code’ (Table 1).
1414 NUMERICAL MODELS / Chemistry Models
Table 1 Five scenarios for past, present, and future mesospheric Jensen E, Thomas GE and Toon OB (1989) On the diurnal
climate simulations variation of noctilucent clouds. Journal of Geophysical
Research 94: 14 693–14 702.
Scenario Date/epoch CO2 CH4 Latitude
(ppmv) (ppmv) boundarya Lübken F-J (1999) The thermal structure of the Arctic
(1) summer mesosphere. Journal of Geophysical Research
104: 9135–9149.
1 Glacial 165 0.75 67 Luo Z, Fritts DC, Protmann RW and Thomas GE (1995)
2 1895 290 0.9 63 Dynamical and radiative forcing of the summer meso-
3 Present 330 1.5 55 pause circulation and thermal structure. Part II: seasonal
4 Late 21st 660 1.5 43 variations. Journal of Geophysical Research 100: 3129–
Century
3137.
5 Late 21st 660 3.0 39
Nedoluha GE, Bevilacqua RM, Gomez RM, Siskind DE,
Century
Hicks BC, Russell III JM and Connor BJ (1998) Increases
a
The latitude boundary is defined as the latitude where the frost in middle atmospheric water vapor as observed by the
point temperature is Tf 5 5, which provides the best value describ- halogen occulation experiment and the ground-based
ing the current-day climatological boundary of NLCs at 551 N. water vapor millimeter-wave spectrometer from 1991 to
1997. Journal of Geophysical Research 103: 3531–3543.
She CY and von Zahn U (1998) Concept of a two-level
Further Reading mesopause: support through new lidar observations.
Andrews DG, Holton JR and Leovy CB (1987) Middle Journal of Geophysical Research 103: 5855–5863.
Atmosphere Dynamics. New York: Academic Press. Thomas GE (1991) Mesospheric clouds and the physics of
Cho J and Röttger J (1997) An updated review of polar the mesopause region. Reviews of Geophysics 29: 553–
mesospheric summer echoes: observation, theory, and 575.
their relationship to noctilucent clouds and subvisible Thomas GE (1996) Global change in the mesosphere–lower
aerosols. Journal of Geophysical Research 102: 2001– thermosphere region: has it already arrived? Journal of
2020. Atmospheric and Solar Terrestrial Physics 58(14): 1629–
Gadsden M (1998) The North-West Europe data on nocti- 1656.
lucent clouds: a survey. Journal of the Atmospheric and Thomas GE, Olivero JJ, Jensen EJ, Schroder Wand Toon OB
Solar Terrestrial Physics 60: 1163–1174. (1989) Relation between increasing methane and the
Gadsden M and Schröder W (1989) Noctilucent Clouds. presence of ice clouds at the mesopause. Nature 338:
Berlin: Springer Verlag. 490–492.
NUMERICAL MODELS
Contents
Chemistry Models
Methods
Introduction
Chemistry Models Chemical models are used to test our understanding of
atmospheric chemistry, and for predictions of the
M P Chipperfield, University of Leeds, Leeds, UK future state of the atmosphere. A model will contain
Copyright 2003 Elsevier Science Ltd. All Rights Reserved. different modules to treat processes such as gas-phase
NUMERICAL MODELS / Chemistry Models 1415
Radiation Dynamics
Figure 1 Components of a chemical model. A multidimensional model will also include dynamical and radiation modules. These may be
combined so that the chemistry is or is not coupled (where changes in chemical species feed back on the radiation and dynamics).
N2O5 molecule colliding with a surface will react, and In an atmospheric model eqn [2] is solved by replacing
a ‘collision frequency’ calculated using kinetic theory the integration over wavelength by a summation over
and the known or assumed concentration of aerosols. discrete wavelength intervals. The World Meteoro-
This treatment can also be used for heterogeneous logical Organization Report No. 16 gives a list of 158
reactions involving solid particles. An alternative wavelength intervals, covering the range 175 nm to
treatment for liquid aerosols, when both reactants 850 nm, which are typically used in stratosphere–
are soluble, is to treat the reaction as a liquid-phase troposphere models. Fewer wavelength intervals can
reaction (as above). be used for troposphere-only models to save computer
time.
Photolysis Rate Coefficients
The photon flux at a point in the atmosphere, Iðl; zÞ,
The photolysis rate coefficient (or photodissociation is calculated using the flux at the top of the atmosphere
frequency) J is the first-order rate constant for the and the Beer–Lambert law,
process shown by reaction [II], where h is the planck
constant and n is the frequency of the radiation. Itr ¼ I0 expð eclÞ ½3
AB þ hn ! A þ B ½II
where I0 is the incident radiation, Itr is the transmitted
As solar radiation is the driving force for atmospheric radiation, e is the absorption (or extinction) coeffi-
chemistry, the accurate calculation of J rates is an cient, c is the concentration of the absorber and l is the
important component of models. path length. The flux at altitude z depends on
The photolysis rate coefficient for species AB (JAB ) is attenuation by absorbing gases (mainly O2 and O3),
calculated from eqn [2], where Iðl; zÞ is the photon scattering by molecules and aerosols, and reflection by
flux at wavelength l and altitude z in the atmosphere, the surface and clouds.
and s is the absorption cross-section. Models may calculate an instantaneous value of J,
Z or an average value over daylight or 24 h period. An
JAB ðzÞ ¼ Iðl; zÞsAB ðlÞdl ½2 instantaneous and regularly updated value of J is
necessary for a model to reproduce the diurnal cycle on
NUMERICAL MODELS / Chemistry Models 1417
short-lived species (e.g., OH). However, this approach Table 1 Subset of gas phase reactions important in stratospheric
can be expensive computationally. For simulations chemistry
of long-lived species, where it is not necessary to
explicitly resolve the diurnal cycle, day- or 24-h Cl þ O3 ! ClO þ O2 ½III
averaged J rates can be used. As the interactive, online
calculation of J rates is nevertheless expensive, some ClO þ O ! Cl þ O2 ½IV
models use precalculated ‘lookup’ tables. The J for the
required conditions is interpolated from the tabulated ClO þ NO ! Cl þ NO2 ½V
values.
ClO þ NO2 þ M ! ClONO2 þ M ½VI
Emissions and Physical Removal
All chemical models, except those simulating isolated ClONO2 þ hn ! Cl þ NO3 ½VII
air masses over short periods, require a representation
of the processes that input and remove chemicals from OH þ HO2 ! H2 O þ O2 ½VIII
the atmosphere. Emissions of trace gases may occur
through natural (e.g., vegetation) or anthropogenic Oð1 DÞ þ H2 O ! 2OH ½IX
processes (e.g., industrial emissions, aircraft). Expert
panels regularly review the strength of these emission
OH þ NO2 þ M ! HNO3 þ M ½X
sources and provide data sets for input into models
[e.g., the Global Emissions Inventory Activity (GEIA)
OH þ HNO3 ! H2 O þ NO3 ½XI
of the International Global Atmospheric Chemistry
(IGAC) program].
HNO3 þ hn ! OH þ NO2 ½XII
Chemical species may be physically removed from
the atmosphere by wet or dry deposition processes.
Dry deposition removes gases and particles at air–
surface interfaces. Wet deposition involves the disso-
lution of a gas into a cloud droplet, which is then either produce (reaction [X]) or destroy (reactions [XI]
rained out. and [XII]) HNO3. Based on this reaction set the
chemical continuity equation for the rate of change of
the concentration of HNO3 contains three terms and
Chemical Continuity Equation can be represented as [5],
Chemical models aim to use the known concentrations
d½HNO3
of chemical species at time t, and calculated rates of ¼ kX ½OH½NO2 ½M kXI ½OH½HNO3
dt
change, to calculate the concentrations at the end of
the chemical timestep t þ Dt. The heart of the model is JXII ½HNO3 ½5
‘chemical continuity equation’. This is an expression
where kn is the rate constant for reaction n and Jn
for the rate of change of a chemical species due to the
is the photolysis frequency. A continuity equation
chemical reactions that produce or destroy it. It is an
can be written for each chemical species contained in
expression of the conservation of mass and can be
the model. This gives a set of coupled first-order
expressed as eqn [4], where P is the rate of chemical
ordinary differential equations. In all but the very
production and L is the rate of chemical loss (which
simplest cases (e.g., the decay of a radioactive
usually depends on [AB]), and square brackets ([])
tracer), an analytical solution is not possible and the
indicate a concentration. Other terms can be included
coupled differential equations must be solved numer-
in eqn [4] to account for other processes that affect
ically. This system of differential equations is usually
[AB] (e.g., physical removal).
‘stiff’, i.e., the lifetimes (or time scales) of the chemical
d½AB species being solved vary by several orders of magni-
¼P L½AB ½4 tude (e.g., seconds to years). Therefore, sophisticated
dt
(and computationally expensive) solvers need to be
Table 1 lists a small subset of the 100 reactions that used.
are important in the chemistry of the stratosphere. A chemical continuity equation similar to [4] can be
This subset is used here to illustrate the form of a written for each species contained in the reaction
continuity equation, but note that detailed atmos- scheme. However, in practice a number of conceptual
pheric models will include many more species and simplifications and numerical approximations can be
reactions. There are three reactions in Table 1 which made.
1418 NUMERICAL MODELS / Chemistry Models
Altitude (km)
a short chemical time step. Computer time can be 40
saved by placing short-lived species in steady state.
In the chemistry of the stratosphere and tropo-
30
sphere, the chemical lifetime of OH is of the order
minutes or less. Therefore, the concentration of OH
Cl
can be derived by placing it in photochemical (or 20 ClO
photostationary) steady state. Based on the reaction ClOx
scheme given above, this would give eqn [6].
10
d½OH 10
−2
10
0
10
2
10
4
10
6
¼0
dt Lifetime (s)
[7] can be identified with reactions [III], [IV], and [V], as chemical families. Box models can either represent
which directly interconvert Cl and ClO. However, a stationary, idealized air mass, or can be combined
there is also a term involving [ClONO2]/[ClO] which with a calculated air mass trajectory to produce a
is related to the two-step interconversion of ClO and ‘Lagrangian’ model (i.e. one in which the model boxes
Cl via the formation and photolysis of ClONO2. It is follow the actual movement of air parcels). Several
very important to include these indirect terms as they chemical trajectory models can be integrated simulta-
are often associated with catalytic cycles which neously to create a ‘domain-filling trajectory model’,
destroy stratospheric O3 via the reaction [III]. In order in which the number of model boxes is sufficient to fill
for the model to correctly determine the O3 loss, the a region of the atmosphere so that 3D distributions can
calculated [Cl] must be accurate. be obtained.
Another chemical family commonly used in atmos- Results from trajectory box models are generally
pheric models is ‘odd oxygen’, which is defined as valid over the time scale on which the approximation
Ox 5 O(3P)1O(1D)1O3. This family provides a very of no mixing in to, or out of, the box is valid. This
convenient way of calculating the atmospheric abun- depends on the location in the atmosphere and may
dances of O3 , O(3P), and O(1D) below about 70 km. vary from a few days in the troposphere to a few weeks
Above this altitude the photochemical lifetime of O to months in the polar lower stratosphere.
becomes long (due to the low air density) and so O and
O3 can no longer be assumed to be in photochemical
equilibrium.
Three-Dimensional Models
Mechanism Reduction Three dimensional (3D) models solve the chemistry on
a longitude latitude altitude array of grid boxes.
The number of species and reactions involved in
Dynamical processes are included that transfer chem-
chemical reactions of organic species in the polluted
ical species between these fixed grid boxes in a so-
(urban) troposphere is huge. For example, the Univer-
called ‘Eulerian’ model. The chemical component of a
sity of Leeds Master Chemical Mechanism model
3D model is essentially a chemical box model. How-
contains around 3800 species and 10 000 reactions.
For many practical purposes the number of reactions ever, the high computational cost of a 3D model means
that reactions schemes have to be limited (e.g., to
needs to be reduced. The methods used for reducing
around 40–50 species) and some careful approxima-
the number of species in urban photochemical models
tions used (e.g., families). The nature of 3D models,
are: (i) the carbon-bond lumping method (when
with their arrays of chemical box models, mean that
organic species are separated into a few common
they can be written to take good advantage of high
bond groups), (ii) the surrogate species method (where
performance vector and parallel computers. Never-
species with similar reactivity are grouped together
theless, when included in a 3D model, the cost of
and solved as one species), and (iii) the lumped species
method (where species are grouped together but the chemistry normally dominates the cost of other
processes (e.g., radiative and dynamical calculations).
reaction rate constants for the lumped group is a mole
The chemistry and transport in a 3D model can be
fraction weighted average of the rate constants for the
combined in an ‘operator split’ approach. In this
individual species).
method the chemical integration is separated from the
dynamical integration and the advection of tracers.
Types of Models This decoupling of chemical and dynamical time steps
is often more efficient as optimum time steps can be
A range of chemical models exist appropriate for
chosen for each process (e.g., the need for a short
studying different problems. In all cases the model chemical time step does not imply an equally short
consists essentially of a chemical ‘box’ model (with the
dynamical time step). A multidimensional chemical
description of the required chemistry) either used
model requires a module for transporting chemical
alone, or within an array of grid boxes in a multidi-
species – i.e., an ‘advection scheme’. The advection
mensional model.
scheme should ideally be: conservative, monotonic (no
undershoots and overshoots), nondiffusive (maintain
Box Models and Trajectory Models
tracer gradients), and nondispersive (tracer features
A chemical ‘box’ model solves the chemical continuity should advect independent of their scale). The advect-
equations in a single air mass. These models can be ion scheme should also advect species independent of
computationally cheap, allowing detailed reaction their concentration. In practice, essentially all of the
schemes to be included (e.g., up to 500 species) and tracer advections schemes in use compromise on one
avoiding the need for numerical approximations such or more of these criteria.
1420 NUMERICAL MODELS / Chemistry Models
Source gases and long-lived species CH4 , N2O, CO, H2O, CFCl3 , CF2Cl2 ,
CHF2Cl, C2F3Cl3 , CH3Cl, CH3CCl3 , CCl4 ,
CH3Br, CBrClF2 , CBrF3 ,
COF2 , COFCl, HF
Fixed O2 , N2 , H2
Two types of 3D chemical models are commonly allowing the calculation of the coupled effects of
used. General circulation models (GCMs) are global chemical and dynamical changes. In these coupled
radiative dynamical models used in numerical weather models, a chemically induced change in O3 , for
prediction and climate studies. Chemistry can be example, will affect the atmospheric heating rates,
included in these models to produce a chemical GCM, temperature, and therefore the dynamics. In turn,
these dynamical changes redistribute O3. As GCMs tion of the real atmosphere and these models are no
calculate their own circulation, the results do not longer used.
correspond to a specific day, but represent the typical Two-dimensional (latitude–height) radiative dyna-
behavior of the atmosphere. Therefore, the results of mical chemical models calculate the zonal mean
GCMs need to be compared with observations in a state of the atmosphere. They were the principal
climatological sense. computational tool in the 1980s–1990s and are still in
Offline chemical transport models (CTMs) do not
calculate the atmospheric circulation. Instead the
wind (and temperature) fields are read in from another
source (e.g., meteorological analyses). This has a
number of advantages: the model is cheaper to run
compared to the full GCM and, importantly, the
model dynamics are constrained to the ‘real’ meteor-
ological situation. This permits direct comparison
between model calculations and observations. As the
circulation in CTMs is fixed, they cannot be used for
future predictions involving coupling of chemistry and
dynamics. The meteorological analyses used to force
CTMs come from weather services such as the
European Centre for Medium Range Weather fore-
casts (ECMWF), U.K. Met Office (UKMO) or the
National Centers for Environmental Prediction
(NCEP). They are produced as part of the routine
weather prediction and now usually extend from the
surface to the upper stratosphere. The accuracy of
CTM results depend critically on the quality of
these meteorological analyses and how they are
used in the model. In the stratosphere the advection
by the analyzed winds is usually the only transport
process considered, while in the troposphere the (A) 0.6 0.8 1.0 1.2 1.4 1.6 1.8 2.0 2.2 2.4 2.6 2.8
model will usually need to parameterize ‘sub-grid- O3 distribution (µmol mol−1)
scale’ transport processes such as convection and
boundary layer mixing. Table 2 illustrates the 4
chemistry which is included in a typical stratospheric
CTM while Table 3 illustrates a similar tropo- 3.5
spheric model. The stratospheric model contains
Ozone VMR (µmol mol−1)
3
detailed halogen chemistry, while the tropospheric
model contains more hydrocarbon species. Simula- 2.5
tions of Arctic O3 depletion from the stratospheric
model are shown in Figure 3. Figure 4 shows examples 2
of CO and NOx distributions from the tropospheric
model. 1.5
1
Ozone sondes 450 K
One-Dimensional and Two-Dimensional Models 0.5
− 50 0 50
Before computer power permitted the use of 3D (B) Date (day of year 2000)
chemical models one-dimensional (1D) and two- Figure 3 Example results from the SLIMCAT three-dimensional
dimensional (2D) models were widely used for atmos- chemical transport model (see Table 2) for the Arctic winter of
pheric studies. One-dimensional models represent 1999–2000. The model was run with a horizontal resolution of 2.51
variations of tracers with altitude and were the main latitude 3.751 longitude. (A) The distribution of O3 near 17 km on
tool in the 1970s and early 1980s. The models 17 March 2000. The model is in good agreement with O3 sonde
observations at around 17 km (450 K) at the Arctic station of Ny
generally represent a global mean atmosphere at Alesund (781 N). (B) The difference between the model O3 and the
each layer and vertical motion is parametrized as a ‘passive’ O3 indicates the chemical destruction since 1 January
diffusion processes. Clearly this is gross approxima- 1999. VMR, volume mixing ratio.
1422 NUMERICAL MODELS / Chemistry Models
use. Although 2D models cannot capture the motion example, they are computationally cheap and are
of stratospheric polar vortex or the longitudinal useful for calculating a wide range of multiyear
asymmetry of tropospheric surface emissions, for scenarios and for sensitivity studies.
ppbv
300
275
250
225
200
175
150
140
130
120
110
100
90
80
70
60
50
40
30
20
(A)
pptv
75
70
65
60
55
50
45
40
35
30
25
20
15
10
5
(B)
Figure 4 Example results from the TOMCAT three-dimensional tropospheric chemical transport model (see Table 3) for January 1996.
The model was run with a horizontal resolution of 5.61 latitude 5.61 longitude. The upper panel shows the distribution of CO near the
surface. The lower panel shows the distribution of NOx at 6.5 km. CO is enhanced in regions of strong emission, such as the industrial
regions of the Northern Hemisphere and in regions of tropical biomass burning. The high levels of NOx at 6.5 km are from similar emission
sources which are then transported, for example by convection, to the mid-troposphere. (Figure courtesy of Marcus Koehler.)
NUMERICAL MODELS / Methods 1423
Methods
J Thuburn, University of Reading, Reading, UK using the available information to advance the solution
Copyright 2003 Elsevier Science Ltd. All Rights Reserved. to the next time level. On the other hand, an equation
describing a relationship among a number of variables
all at the same instant in time is called a diagnostic
The Need for Numerical Solutions equation. The ideal gas law is an example of a local
Only in a small number of special cases can exact diagnostic equation. Nonlocal diagnostic equations are
analytic solutions be found for the differential equa- also important; they are often boundary value problems
tions describing the fluid dynamics, physics, and and often describe some kind of balance such as hydro-
chemistry of the atmosphere. In all other cases static balance or the relationship between quasi-geo-
solutions can be found only by approximating the strophic potential vorticity and streamfunction (see
differential equations by algebraic equations and then Dynamic Meteorology: Overview). They also arise in
finding specific numerical solutions to these algebraic connection with implicit time stepping schemes – see
equations. Because of the vast amount of arithmetic below. Boundary value diagnostic equations require
involved, numerical solutions are virtually always different solution methods from prognostic equations
found with the aid of electronic computers. because the solution at any point in the domain depends
simultaneously on all of the boundary and forcing values.
The equations used to model the atmosphere are
Types of Equations nearly always a combination of prognostic and diag-
nostic, and so a corresponding combination of nu-
In broad terms, the method for finding a numerical
merical solution methods is used.
solution generally reflects the type of equation being
solved, which in turn reflects the nature of the physics
that the equation describes. For example, an equation Representation of Data; Resolution
describing how a variable evolves in time is called a
prognostic equation. A prognostic equation is solved by
and Aliasing
specifying the solution at some initial time, along with Fields like temperature and velocity are usually con-
appropriate boundary conditions, and then repeatedly sidered to exist throughout a continuous region of
1424 NUMERICAL MODELS / Methods
>
>
> >
Figure 1 Gridpoint representation of a simple function. Five data Figure 3 Finite element representation of a simple function. In
values are stored, indicated by the diamond symbols. this case the individual elements are ‘witch’s hats’, which are
continuous, piecewise linear, and nonzero over only two cells. Five
data values are stored.
space and time and so contain, potentially, an infinite
amount of information. For a numerical solution to be
obtained, these fields must be represented approxi-
In more than one dimension combinations of the
mately by a finite set of data values that can be stored in
above methods can be used, e.g., gridpoint in the
a computer. There are several possible ways to do this.
horizontal and finite element in the vertical, or spectral
Gridpoint representation. In gridpoint methods a in the horizontal and gridpoint in the vertical.
field is represented by its values at a finite set of The number of data values used to represent a field
points called the grid or mesh points (Figure 1). defines the model resolution: a greater number of data
Finite volume representation. Each value stored in values corresponds to higher resolution and means
the computer represents the value of a field not at a that smaller-scale structures in the field can be repre-
point but averaged over a finite volume or grid cell sented. Nevertheless, for any fixed number of data
(Figure 2). values there will be some limiting scale below which
Finite element representation. Each field f is repre- structures cannot be represented. Structures on small-
sented as a series in terms of certain basis functions er scales than this will be misrepresented, or aliased, as
ci ðxÞ (eqn [1]) and the coefficients f^ are stored in features of some other scale (Figure 5). Aliasing is an
i
the computer (Figure 3). important problem because, even if the initial data are
smooth, the nonlinearity of the equations describing
atmospheric dynamics tends to generate structure on
X
fðxÞ ¼ f^ c ðxÞ ½1
i i
i ever smaller scales, and eventually on scales that must
be aliased. This is one reason why models often include
Usually the ci are simple local functions that are some form of scale-selective dissipation to damp
piecewise constant or piecewise linear over a small poorly resolved near-grid-scale structure.
number of gird cells and zero elsewhere.
Spectral representation. As for finite element meth-
>
>
(B)
>
Figure 2 Finite volume representation of a simple function. Five Figure 4 (A) Fourier representation (dotted curve) of a simple
grid-cell-average values are stored, indicated by the histogram function (solid curve). The coefficients of five Fourier components
values. are stored; those components are shown in (B).
NUMERICAL MODELS / Methods 1425
Figure 6 The arrangement of variables on the five staggered The CFL Criterion
grids analysed by Arakawa.
According to the Courant–Friedrichs–Lewy (CFL)
criterion, a necessary condition for the stability of a
numerical scheme for a hyperbolic equation is that the
Staggered Grids domain of dependence of the numerical solution at any
The accuracy of some gridpoint methods can be point (jDx; nDt) should include the domain of de-
improved by storing different variables, such as the pendence of the true solution at the same point. For
different wind components and temperature, on dif- example, for the scheme [6] the numerical domain of
ferent grids that are staggered with respect to each dependence of fnj consists of the points ðj 1ÞDx and
other in space. The best-known are the five grids, jDx at time ðn 1ÞDt. Since, for the true solution of the
known as the A-grid, B-grid, etc., that were classified linear advection equation, information propagates at
and analysed by Arakawa (Figure 6). It is also possible velocity v, the domain of dependence of the true
to store fields in a way that is staggered in time, or both solution consists of the single point jDx vDt at time
space and time, but this is rarely used. ðn 1ÞDt. In this case the numerical domain of
dependence contains the true domain of dependence
if and only if 0 vðDt=DxÞ 1. In general, satisfac-
tion of the CFL criterion is necessary but not sufficient
Finite Element and Spectral Methods
to guarantee stability, though in the example just given
For finite element and spectral methods the object is to it turns out to be sufficient too.
determine how the coefficients f ^ evolve in time. One The quantity vðDt=DxÞ is called the Courant
i
way to do this is to require that the residual, which is number. An analogous quantity can be defined for
the amount left over when the approximate solution other equations with wavelike solutions, e.g. gravity
[1] is substituted into the original equation, be waves, with v replaced by the speed of the equation’s
orthogonal to each of the basis functions. This characteristics. Many schemes are stable only for a
NUMERICAL MODELS / Methods 1427
limited range of Courant numbers, so that at any given Implicit Time Stepping and
model resolution it is important to use a time step Semi-Implicit Time Stepping
small enough to ensure stability; this, of course, affects
the overall cost of the model. Consider the following two schemes (eqns [9] and
[10]) for time discretization of the equation
qf=qt ¼ RðfÞ.
Semi-Lagrangian Advection
fnþ1 fn 1
Semi-Lagrangian schemes are a way of modeling the ¼ Rðfn Þ ½9
2Dt
advection terms in fluid dynamical equations while
satisfying the CFL criterion and ensuring stability
without any restriction on the time step. By removing fnþ1 fn 1
¼ Rðfn Þ þ R fnþ1
½10
one of the major constraints on the time step, they Dt 2
allow models to be run more cheaply, and as a result Scheme [9] is an example of an explicit scheme;
they are now widely used. fnþ1 is given explicitly in terms of known quan-
An equation of the form Df=Dt ¼ S, where S tities fn 1 and fn . Scheme [10], on the other
represents all terms other than the advection term, is hand, is an example of an implicit scheme; fnþ1
typically discretized along an air parcel trajectory appears on both sides of the equation, making it
starting from some departure point xd at time nDt and more difficult to solve. The advantage of scheme
arriving at a grid point xj at time ðn þ 1ÞDt as in eqn [7] [10] is that it is stable for any size of time step and
(Figure 7). any reasonable R, whereas scheme [9] is stable only
for a limited range of time steps and for certain
fnþ1
j fnd forms of R.
¼
S ½7
Dt Implicit time schemes are often used for modeling
atmospheric chemistry, where short reaction time
Here S is some estimate of S averaged along the scales would require very short time steps for
trajectory, fnþ1
j is the value of f at xj and time stability if an explicit time scheme were used. Implicit
ðn þ 1ÞDt, and fnd is the value of f at xd and time nDt. schemes are also often used in atmospheric models
In general xd will not coincide with a model grid point to model the gravity wave terms, and, if the hydro-
so that the value fnd must be found by interpolation. static approximation is not made, the acoustic wave
Cubic interpolation is typically used. terms. Acoustic and gravity waves are the highest-
The departure point xd is given implicitly by eqn [8], frequency signals in the atmosphere and would
where v is an estimate of the average velocity along the strongly constrain the time step if explicit time
trajectory, e.g., v ¼ ðvnþ1
j þ vnd Þ=2. Equation [8] is schemes were used. One effect of implicit time schemes
implicit because v depends on xd ; when large time steps are used is artificially to slow the
xj xd highest-frequency waves. This is usually considered
v
¼ ½8 acceptable, since acoustic and gravity waves are not
Dt
the most significant meterological features on synoptic
it is solved iteratively using typically two or three scales.
iterations, with vnd estimated by linear interpolation at Because the equations describing the atmosphere
each iteration. are nonlinear, an implicit discretization in the form
[10] would be difficult and expensive to solve for fnþ1.
Instead a semi-implicit discretization is usually used
(eqn [11]).
n +2
fnþ1 fn 1
n +1 ¼ ½Lðfn Þ þ Lðfnþ1 Þ
Dt 2
n
xd þ Rðfnþ1=2 Þ Lðfnþ1=2 Þ ½11
n−1
Here L is an approximation to R (or to that part of R
j−4 j−3 j−2 j−1 j j +1 describing gravity waves) obtained by linearizing
about a suitable reference state, usually a stratified
Figure 7 Schematic showing how a semi-Lagrangian advection
scheme can carry information along an air parcel trajectory from the atmosphere at rest, and fnþ1=2 is an estimate of f
departure point xd at time nDt to the arrival grid point xj at time at time ðn þ 1=2ÞDt obtained, for example, by
ðn þ 1ÞDt. extrapolating from times ðn 1ÞDt and nDt. This
1428 NUMERICAL MODELS / Methods
leads to a much simpler, linear problem for fnþ1 were used and the basis functions could be chosen to be
(eqn [12]). eigenfunctions of the Helmholtz operator, then M
would be diagonal and the solution would be trivial. In
Dt
fnþ1 Lðfnþ1 Þ ¼ ðknown termsÞ ½12 practice it is possible to choose the basis functions to be
2 eigenfunctions of the horizontal part of the Helmholtz
Equation [12] is usually of a form similar to eqn operator, e.g. spherical harmonics in spherical geo-
[13] for some coefficients n, known as a Helmholtz metry. Then eqn [14] separates into a number of much
equation. smaller problems whose matrices correspond to the
vertical part of the Helmholtz operator; these can be
fnþ1 nr2 fnþ1 ¼ ðknown termsÞ ½13 solved by direct matrix inversion.
If a spectral representation is not used then eqn [14]
Thus, an elliptic problem with suitable boundary
is usually solved iteratively. One set of methods
conditions must be solved to determine fnþ1 .
involves relaxation of an approximate solution to
The combination of a semi-Lagrangian treatment of
obtain a better approximation at each iteration. The
advection terms with a semi-implicit treatment of
convergence of the iteration procedure can be greatly
gravity waves and acoustic waves removes most of the
accelerated by carrying out some iterations on coarser
stability constraints on the time step size, allowing the
grids than that on which the final solution is required;
time step to be chosen on the basis of accuracy rather
this is a multigrid method. Another iterative method
than stability considerations, and thus making models
involves reformulating eqn [14] as a minimization
more efficient. For this reason, models based on semi-
problem and then solving it using a minimization
implicit semi-Lagrangian schemes have become
algorithm such as the conjugate gradient algorithm.
widely used.