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https://doi.org/10.1007/s12520-018-0690-y
ORIGINAL PAPER
Abstract
Digital image analysis has recently emerged as a powerful tool for the analysis of the ceramic thin sections. By producing
quantitative data, it increases the usefulness of ceramic petrography to address archeological questions. Despite several works
considering digital image analysis to study archeological ceramic materials, so far, no work has been proposed to evaluate the
possibilities of optical microscopy (OM) image analysis for classification and modal analysis, knowing its advantages and
drawbacks, as compared to scanning electron microscopy (SEM) image processing. In this work, we propose an algorithm to
count the mineral inclusions correctly classified by OM image analysis with respect to SEM images. The proposed algorithm is
based on a matching mechanism applied to the regions of interest (ROIs) detected in the OM images according to the corre-
sponding ROIs as detected in the SEM images. Moreover, a comparison with point counting on the same OM images is also
provided to evaluate the pros and cons of each method. Two Late Acacus (Mesolithic) potsherds (8900–4200 BP) are considered
as case study for modal analysis to identify and classify quartz, feldspars, and carbonate aggregates as mineral inclusions.
Keywords Ceramics . Optical microscopy . Image processing . Scanning electron microscopy . Point counting . Thin sections .
Classification of mineral inclusions
(e.g., identify polymorphs, distinguish crystals in isolate and recognize the considered mineral inclusions. Then,
monomineralic rock fragments, etc). Secondly, the image ac- an algorithm was proposed to classify automatically the ROIs
quisition phase in OM is a low-cost approach both in terms of detected in the OM images according to the corresponding
sample preparation time and instrumentation used. Lastly, its ROIs as detected in the SEM images. Moreover, a comparison
flexibility may grow if an image analysis freeware software is with point counting on the same OM images is also provided.
coupled with. Thin section petrography is also widely used to The paper is organized as follows. In the BIntroduction^ sec-
study ceramic archeological materials as one of the routine tion, the state of the art and the adopted workflow are summa-
analytical techniques of ceramic petrography aimed to de- rized, as seen. In the BMaterials and methods^ section, the
scribe and classify pottery fabric namely the mineralogical image acquisition phase (the BImage acquisition^ section) is
composition, percentage, shape, grain-size and orientation of described and the image segmentation strategy (the BImage
argillaceous minerals, non-plastic inclusions, and pores segmentation^ section) adopted for both OM and SEM images
(Shepard 1956; Rice 1987; Reedy 2008; Peterson 2009). As and eventually the rectification phase required after image
ceramic petrography moved towards a more quantitative ap- segmentation (the BRectification phase^ section 2.4). The al-
proach for textural analysis (Stoltman 1989) and along with gorithm developed to classify the ROIs detected in the OM
the contemporary diffusion and improvement of digital de- images according to the corresponding ROIs as detected in the
vices, image analysis emerged as a powerful tool also for the SEM images is then formalized (the BCounting correctly clas-
analysis of ceramic thin sections (Reedy 2006). Pilot studies in sified ROIs in OM images^ section). Modal analysis as per-
the field are the ones by Middleton et al. (1985) and formed by point counting is also described here (the BPoint
Whitbread (1991) who respectively evaluated different strate- counting^ section). Classification performance observed is
gies to perform point counting and to automatize its hence evaluated and discussed in the BResults^ and
procedures adopting the earliest proofs of digitalized images BDiscussion and comparison^ sections.
of ceramic thin sections. Later, Livingood and Cordell (2009)
evaluated and compared the accuracy and feasibility of digital
image techniques against point counting using digital images Materials and methods
acquired by scanner. More recently, Reedy et al. (2014) pre-
sented an experimental work aimed to test the consistency and According to the aim of the work, the selected techniques for
reproducibility of image analysis in order to manage even modal analysis were applied to two Late Acacus (Mesolithic)
more complex archeological samples. They finally stated that potsherds (8900–4900 BP) which were chosen as case study
image analysis, by producing quantitative data, increases the according to their simpler mineral composition that is preva-
usefulness of ceramic petrography to address archeological lent quartz, feldspars, and carbonate aggregates as mineral
questions. Actually, the pieces of information that can be col- inclusions (Fig. 1). These samples are a part of a larger selec-
lected, especially about grain-size and morphometry of min- tion of representative potsherds belonging to the Takarkori
eral inclusions and their identification, allow to define raw rock-shelter archeological site (Libyan Sahara), as described
material sources and provenance and to reconstruct technolog- in Eramo et al. (2014). According to this study, the selected
ical processes of production (Maggetti 1982; Tite 2008). In the samples may be thus considered reliable for the estimation of
last years, even more works considered routinely digital image the real mineral composition of such ceramics.
analysis to study archeological ceramic materials (e.g., In this work, two types of images particularly were
Knappett et al. 2011; Aprile et al. 2014; Dal Sasso et al. manipulated:
2014; Eramo et al. 2014; Lopez et al. 2015; Thér 2016).
However, to our knowledge, at present, no work is known in 1. OM images composed by pairs of plane (P) and cross
the field which is aimed to evaluate the possibilities of OM (XP) polarized light images (used for both optical image
image analysis for classification and modal analysis, knowing analysis and point counting)
its advantages and drawbacks, as compared to SEM image 2. X-ray elemental maps produced by SEM/EDS.
processing. To such a purpose, in this work, a classification
strategy was developed to count the mineral inclusions cor- In the following, the acquisition of these images is
rectly classified by OM image analysis. Each class (e.g., one described.
type of mineral inclusion) and the corresponding mineral in-
clusions detected as regions of interest (ROIs) by segmenta- Image acquisition
tion of the OM images were compared with the ROIs seg-
mented in the corresponding SEM images, to evaluate the Image acquisition of optical images considered four pairs of P
accuracy of the classification obtained with the OM image and XP images in RGB digital format (resolution of 1920 ×
analysis. To do this, ad-hoc image segmentation procedures 2560 pixel size) acquired in transmitted light for each thin
were firstly assessed for both OM and SEM images in order to section at a magnification of × 2.5 (1.315 mm/pixel) as shown
Archaeol Anthropol Sci
in Fig. 2. The four different areas maintain a distance of 1 cm The accuracy of the percentages obtained by point counting
between the center of each frame by the successive one and was calculated after Howarth (1998).
moving lengthwise on the thin section. A ZEISS Axioskop 40
Pol optical microscope for petrography, equipped with a
Image segmentation
Nikon DS-5MC digital camera with 2/3″ CCD (Peltier
cooling system), was used to such a purpose.
The segmentation phase was devoted to isolate ROIs of the
By using SEM, backscattered (BSE) images (resolution of
three considered types of mineral inclusions by manipulating
4096 × 3328 pixel size) and the associated set of elemental X-
the acquired OM and SEM images to produce corresponding
ray maps of Al, Ca, Fe, Si, K, Mg, P, Na and Ti (resolution of
binary images. To such a purpose, different segmentation pro-
2046 × 1664 pixel size), corresponding to the same areas con-
cedures for the two types of images were developed, as de-
sidered for optical microscopy acquisition, were acquired
scribed in the following.
from each sample at a magnification of × 65 (Fig. 3). A
ZEISS LEO 50XVP scanning electron microscope, operated
at 15 kV, equipped with a X-MaxN80mm2 SDD detector and Optical microscopy
Aztec software (Oxford Instruments) for X-ray maps was
used. For quartz and carbonate aggregates, we adopted the image
segmentation procedure based on mathematical operators as
described in Aprile et al. (2014). To succeeded in feldspar
Point counting segmentation (i.e., to separate individual grains), it has been
primarily considered that, according to their optical similarity,
To perform modal analysis via point counting (PC), the point the twinning phenomena may be useful to distinguish between
counter tool of the freeware software JMicroVision (Roduit quartz and feldspars. In these samples, it has been particularly
2017) has been adopted, which allows the operator to obtain observed that twinned regions were characterized by different
automatic statistics (i.e., frequency and volume) of phases of texture with respect to quartz because of their altered nature.
interest recognized during the eye-naked identification step. A To such a purpose, the P images were manipulated in order to
total of 1200 points per thin section (300 per area) were count- define an ad-hoc segmentation strategy because they showed
ed using the four pairs of P-XP images acquired by OM. more clearly the outlines of interested regions (Aprile et al.
Particularly, only the considered mineral inclusions of quartz, 2014). Particularly, the K-means clustering algorithm (Jain
feldspars, and carbonate aggregates were counted, in order to and Dubes 1988) implemented in ImageJ (Ferreira and
normalize the tallies among areas and make a sound compar- Rasband 2010-2012) was applied to P images. As described
ison with the same corresponding inclusions as segmented by in Aprile et al. (2014) for the other procedures adopted, cor-
OM and SEM images (see the BImage segmentation^ section). responding binary images of quartz and carbonate aggregates
Fig. 3 Example of backscattered (BSE) and corresponding elemental maps of Al, Ca, Fe, Si, K, Mg, P, Na, and Ti acquired by scanning electron
microscopy (SEM/EDS)
were inverted and filtered using the Gaussian Blur, the adopted for quartz, carbonate aggregates, and feldspars in the
Median, and the Maximum filters in order to guarantee a better case of OM images, showing an example of the corresponding
overlap of the edges with the P image in the next steps. binary images produced.
Actually, these images were subtracted by the P image previ-
ously processed. Then, in order to obtain the binary image Scanning electron microscopy
containing ROIs of the class of feldspars, we finally applied
the Isodata thresholding method and the median filter To perform segmentation, the elemental maps of Si, Ca, Na,
Despeckle to reduce noise. Both methods are implemented and K were selected because they are considered more infor-
in ImageJ. Figure 4 summarizes the segmentation procedure mative, on the base of their chemical composition, to identify
Fig. 4 Segmentation of OM images and corresponding binary images (Qtz = quartz; Feld = feldspars; Cal = carbonate aggregates) produced via the K-
means algorithm implemented in ImageJ
Archaeol Anthropol Sci
our mineralogical phases of interest. Then, each map was SEM binary images overlap as much as possible. Since they
assigned to a channel in the visible band (i.e., red = map of are obtained using two different acquisition instrumentations,
Si; green = map of Ca + Na; blue = map of K). The freeware is it natural to have topological differences between pairs of
software for multispectral analysis Multispec © (Landgrebe corresponding OM and SEM images even if acquired from the
and Biehl 1991-2011) was used to such a purpose. A multi- same area? Hence, a geometric correction called rectification
spectral image containing different areas corresponding to the (simultaneous rotation and translation) was applied. To such a
phases of interest according to the abundance/presence of purpose, the affine transformation method (Jain 1986) was
those chemical elements in each phase. It must be specified applied, a linear mapping method preserving points, straight
that, even if the map of Na is usually combined with the map lines, and planes so that sets of parallel lines remain the same
of K to isolate alkali-feldspars, the map of K was used here on after its application. The JMicroVision tool was used, which
its own to such a purpose because of the abundance of alkali- applies the affine transformation on the basis of at least three
feldspars towards plagioclase. Rather, the combination of the control points applied on one image that will be also visual-
maps of Na and Ca (using the addition operator) worked out ized in the corresponding image to be rectified. Particularly,
properly particularly to isolate carbonate aggregates and then each SEM binary image was rectified by selecting 50 control
plagioclase. Similar strategies, which emphasize the chemical points per corresponding OM binary image. The correspond-
contribution of these elements, are also suggested by Lydon ing control points on SEM binary image were then shifted
(2005). Then, a supervised classification was applied by manually until a match of corresponding ROIs in both images
means of the training field method (Lydon 2005) as imple- was achieved. Actually, each pair of control points must match
mented in Multispec © to automatically classify pixels of the eventually the same location on both images as much as pos-
multispectral image into the corresponding regions of quartz, sible to achieve accurate geometric correction. Effects of rec-
feldspars, and carbonate aggregates (Fig. 5). By adopting this tification phase on OM and SEM binary images are shown in
method, it is known where all mineral classes occur in the Fig. 7.
image and hence the user can manually select corresponding
areas to be used as training examples. Particularly, 30 areas
Counting correctly classified ROIs in OM images
per phase were selected. In order to obtain the corresponding
binary images, the Isodata thresholding method and the me-
The algorithm developed to perform automatic counting of the
dian filter Despeckle to reduce noise (Fig. 6) were finally
correctly classified ROIs of OM images previously segmented
applied. Moreover, SEM binary images were resized accord-
is provided as Supplementary material.
ing to the resolution of OM images.
To correctly apply the proposed classification strategy (see the In the modal analyses carried out with PC, we considered
BCounting correctly classified ROIs in OM images^ section), grain size above 16 μm, which approximates, according to
it is necessary that pairs of corresponding ROIs of OM and the scale of Udden-Wentworth (1922), the limit of 15 μm to
define the non-plastic inclusions (NPIs) of the ceramic body observed in Table 2, where the number of quartz OM ROIs
proposed by Maggetti (1982). PC was carried out on the same are generally only half of the ROIs segmented in SEM images.
four areas of samples TK66 and TK69 chosen for image anal- Conversely, for feldspars and carbonate aggregates, the ROIs
ysis. In both samples, it was observed that quartz is the prev- segmented in OM images are down to a tenth of those in SEM
alent phase among those counted, while the relative amounts images. Particularly, the larger number of detected SEM ROIs
of feldspars and carbonate aggregates are inverted (Table 1). is observed in the range 16–32 and 32–63 μm as expected.
Moreover, if the variability of data among areas of the same Only in TK69, carbonate aggregates detected in OM images
sample is considered, sample TK69 shows higher heterogene- are overestimated in this grain size ranges. It was then defined
ity. The relative standard deviation (RSD) of the points count- 〈 = 63 μm as lower threshold for our analysis. Actually, this
ed per mineral phase ranges from 0.1 to 0.8 in TK66 and from limit provides the best compromise according to grain size
0.2 to 2.8 in TK69. Quartz has the lowest RSD values in both range generally observed for mineral inclusions in ancient
samples. Consequently, it can be said that the sample TK66 is ceramics when adopting both OM and SEM. Three different
relatively rich in feldspars, while quartz and carbonate aggre- grain filtering approaches were consequently applied, to ob-
gates prevail in the sample TK69. tain ROIs characterized by three grain sizes according to the
According to Table 2, the size distribution of the ROIs with maximum Feret value: (a) larger than 63 μm, (b) larger than
grain size above 16 μm is unimodal in both SEM and OM 125 μm, and (c) larger than 250 μm. Table 3 shows the num-
images. While the frequency mode for the SEM ROIs is in the ber M and N respectively of ROIs in the OM and ROIs in the
range 16–32 μm, a shift in the range 32–63 μm is observed for SEM segmented images for the considered three grain sizes
the OM ROIs. for quartz, feldspars, and carbonate aggregates and highlights
As it concerns the evaluation of image analysis results, it how the grain size thresholding affects the modal analysis. It
was chosen to define a grain-size threshold value α based on can be seen that quartz and carbonate aggregates show almost
maximum Feret diameter (extracted by using the ImageJ tool) similar values of M and N, while in the case of feldspars, the
in order to allow accurate comparison between corresponding values of N are higher than M, particularly for the grain size
detected ROIs of OM and SEM identified after segmentation. including the finer fraction corresponding to maximum Feret
Actually, SEM enables a better detection of mineral phases for > 63 μm.
the smaller grain sizes than OM, leading typically to a larger Next, for each considered grain size of each class, it was
number of detected ROIs that is N > > M (see also the applied the algorithm described in the BCounting correctly
BDiscussion and comparison^ section). This can be clearly classified ROIs in OM images^ section to count the number
Fig. 7 Rectification phase. a Inaccurate overlap of corresponding OM and SEM binary images due to the different acquisition instruments. b Overlap of
OM and SEM binary images after application of the affine transformation by means of control points
Archaeol Anthropol Sci
Table 1 Statistics of PC and modal composition (percentage) for Table 3 Number of OM (M) and SEM (N) ROIs as detected by the
samples TK66 and TK69 (Qtz quartz, Feld feldspars, Cal carbonate segmentation phase for each considered grain size and class (Qtz quartz;
aggregates) Feld feldspars; Cal carbonate aggregates)
Total points 823 334 43 879 156 165 > 63 586 632 915 241 73 78
Mean 205.8 83.5 10.8 219.8 39.1 41.3 > 125 157 192 268 102 35 33
SD 15.6 12.2 21.1 39.1 29.5 32.7 > 250 41 44 63 46 6 9
RSD 0.1 0.8 0.3 0.2 2.8 0.8
Percentage 68.6 27.8 3.6 73.3 13.0 13.8
The number of grains per each grain-size class and their relative percentage is reported and compared with those
obtained from SEM images
Archaeol Anthropol Sci
70
classification (%)
60
50
40
30
20
10
0
> 63 > 125 > 250
give thus room to several discussion points summarized in the distortion of a given OM ROI area in respect to the correspond-
following. The classification accuracy (ACC) of image analysis ing ROI of SEM image was defined using the ratio AOM/ASEM
was based on frequency of ROIs estimated by the differences in Fig. 9. Different trends for carbonate aggregates and quartz
between OM percentage and SEM percentage. Particularly, it and feldspars were found. Particularly, the carbonate aggregates
was observed that ACC generally gets higher when grain size are microcrystalline and appear more opaque than quartz and
increases. This may depend on OM limitation which deals with feldspars and show higher area distortion (> 1), especially for
masking finer NPIs with respect to SEM, effect due to (a) the finer particles. Although quartz and feldspars show a similar
different image aberrations of transmitted light microscopy and trend, the distortion of ROIs with maximum Feret > 63 μm
(b) the different characters of sectioning even though thin sec- appeared somewhat bimodal. These transparent NPIs may be
tions are used in both cases. Actually, when a thin section of spherical zones of one or two bases immersed in a more or less
pottery or fine-grained material is observed by OM in transmit- opaque matrix. Just as a spherical zone of one base will give an
ted light, a masking effect due to the overlapping of particles OM ROI area smaller than the corresponding SEM ROI, a
whose maximum Feret is less than 30 μm is more probable. It spherical zone of two bases will give a larger OM ROI area of
follows that two or more features can appear to be a single one, that of SEM only if the smaller base of the grain is on the top the
and a more or less opaque matrix can mask finer particles thin section. Being constant, the geometry of the spherical zone,
(Chayes 1956). In SEM images conversely, thin section thick- the AOM/ASEM ratio increases as the opacity of the matrix de-
ness does not influence image quality and contrast between creases. The strongest biases are produced by the finest fraction
grains and matrix is moreover improved by BSE and X-ray considered namely 63–125 μm. Such overestimation of area
maps. The segmented particles in SEM images with maximum measurement is due to the Holmes effect (Cahn 1959). Since
Feret comprised between 16 and 63 μm are hence strongly the observation does not only involve a single plane, but a thin
masked in OM images, as just seen in Table 2. Moreover, when slice, the observations in transmitted light may produce an en-
a cut is made in a granular solid material, the size and shape of larged projection of the particle on the image plane of the mi-
particles is distorted. It is known that the average size of the croscope, leading to an overestimate of the area and the volume
grain sections will be less than the average size of the grains, fraction of a given particle. This effect increases with opacity
since random sections through the grain along plain containing and with the smaller size of particles present in the thin section,
the maximum diameter is less probable (Krumbein 1935). partially or not sectioned. The marked magnification observed
Moreover, the theoretical assumption of random distributed in the carbonate aggregate ROIs segmented in TK69 may be due
spheres within the sample is not wholly satisfied in fine- to the merging of several particles occurring at different height in
grained rocks, since they tend to be polymineralic, poorly sorted, the thin section. Rather SEM images prevent Holmes effect and
and consist of grains with low sphericities. The use of maximum are not affected by masking effect for finer grains. At low mag-
Feret in sectioned grains is the best approximation to true inter- nification (× 30–100), they may suffer peripheral area distortion
mediate axis of the whole grain, for both theoretical and practical which can be attenuated increasing the number of sampling
reasons (Kellerhals et al. 1975). For the analyzed samples, the areas at higher magnification (e.g., × 100–500) or changing the
Archaeol Anthropol Sci
6.4 TK66
5.6
4.8
4.0
AOM/ASEM
3.2
2.4
1.6
0.8
0.0
26
24 TK69
22
20
18
16
AOM/ASEM
14
12
10
0
> 63 µm > 125 µm > 250 µm > 63 µm > 125 µm > 250 µm > 63 µm > 125 µm > 250 µm
Calcite aggregates Quartz Feldspars
Fig. 9 Area distortion corresponding to the three considered classes for sample TK66 (left side) and TK69 (right side). Mild outliers (1.5–3 IQR) are
shown as circles, while extreme outliers (> 3 IQR) are shown as stars
electron beam characteristics. The bias observed in the finer This let to define a dimensional lower limit of grains segmented
grain sizes between OM and SEM ROIs was eventually elimi- or counted on OM images for a more accurate modal analysis.
nated considering maximum Feret values greater than 250 μm. Actually, while an upper limit of coarseness, expressed by the
Archaeol Anthropol Sci
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