Professional Documents
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Introduction To Complex Networks
Introduction To Complex Networks
Grau en Ciència de Dades | Escola Tècnica Superior d’Informàtica | Universitat Politècnica de València
Sources
●
Albert László Barabási: Network Science course, Cambridge
University Press, 2016.
– Chapter 01, Chapter 02
●
Carlos Castillo: Network Science course, Universitat Pompeu
Fabra, 2021
2/50
Contents
1. Complex systems, networks and social networks
2. Examples of networks
3. History of network science
4. Characteristics, impact and applications of
network science
5. Bibliography on network science
6. Datasets repositories
: departments
: consultants
www.orgnet.com
: external experts Social Network Analysis (SNA): Introduction to complex 5
networks
Complex systems
●
Many interconnected parts
of the same or related nature
●
Complicated arrangement
of connections
●
Emerging properties can shed
light on its behavior
6/50
Behind every complex system
there is a complex network
●
Connections between neurons in the brain
●
Interactions between genes and proteins
●
Infrastructure of telecommunications and electricity
●
Commerce/trade networks
●
Family/friendship ties in human and non-human
animals
Social Network Analysis (SNA): Introduction to complex networks
7/50
Social networks are complex networks
●
Social network analysis
Study of the empirical structure of social relations and
associations that may be expressed in network form
●
It encompasses many disciplines
sociology anthropology human geography history
social psychology political science biology demography
economics communication science organizational studies
●
Theory and methods used for complex networks are fully
applicable to social networks
Social Network Analysis (SNA): Introduction to complex networks
8/50
Examples of social structures
Nodes:
Companies
Investment
Pharma
Research Labs
Public
Biotechnology
Links:
http://ecclectic.ss.uci.edu/~drwhite/Movie
Collaborations
Financial
R&D 12
Social Network Analysis (SNA): Introduction to complex networks
INTERNET ROUTING
13
HUMAN DISEASE NETWORK
14/50
Human brain: neurons ≃ 90 x 109
https://health.uconn.edu/cell-analysis-modeling/microscopy-facility-2/https://dx.doi.org/10.1371%2Fjournal.pone.0004006
15/50
Regions in the human brain
Network representation of brain connectivity. The thickness of the lines represent the
strength of connection between different brain areas. Important 'hubs' are marked as circles.
https://en.m.wikipedia.org/wiki/File:Network_representation_of_brain_connectivity.JPG 16/50
Gene networks
Several types are used by scientists
Gene expression is the process by which
information from a gene is used in the
synthesis of a functional gene product that
enables to produce protein or non-coding
RNA, and ultimately affect the phenotype
Social Network Analysis (SNA): Introduction to complex networks
17/50
Co-expression of genes
Gene co-expression analysis
is a data analysis technique
that helps identify groups
of genes with similar
expression patterns
, Klein, U., Dalla-Favera, R., & Califano, A. (2005). Reverse engineering of regulatory networks in human B cells. Nature genetics, 37(4), 382.
18/50
Human
gen-disease
network
http://www.pnas.org/content/104/21/8685 19/50
Colors and sizes:
indegree
Moreno’s
sociograms
●
Early 1930s
●
Children in 2nd grade
●
Who would you like
to sit with?
http://www.martingrandjean.ch/social-network-analysis-visualization-morenos-sociograms-revisited/
20/50
Zachary’s
Karate Club
●
Early 2000s
●
Adolescents in high
school
●
A “special romantic
relationship”
23/50
Bearman, P. S., Moody, J., & Stovel, K. (2004). Chains of affection: The structure of adolescent romantic and sexual networks. American journal of sociology, 110(1), 44-91.
A “nonromantic sexual relationship” in the past 18 months
24/50
Social Network Analysis (SNA): Introduction to complex networks
25/50
1,000
Somali
Users of
Facebook
https://kimoquaintance.com/2011/08/22/what-can-we-learn-about-somalis-from-their-facebook-networks/
26/50
400,000 Twitter Users
https://dhs.stanford.edu/gephi-workshop/twitter-network-gallery/
27/50
Exercise
●
Find examples of networks, just indicating:
– Name
– Number of nodes (approximately)
– Number of edges (approximately)
28/50
History of network science
Number of cites
Empirical
In the real world, everywhere you look at is plenty of networks.
Network science is based on the observation of real networks.
Network analysis is data-driven.
Social Network Analysis (SNA): Introduction to complex networks
Characteristics of network science
Computational
Algorithms help to compute large amount of data from networks
for analyzing and visualizing networks.
August 14, 2003: 9:29pm EDT | 20 hours before August 15, 2003: 9:14pm EDT | 7 hours after
https://itnews.iu.edu/articles/2014/complex-networks-researcher-at-iu-fighting-crime-with-mobile-phone-data.php
Impact of network science
https://theintercept.com/2018/08/16/chicago-police-misconduct-social-network/
Impact of network science
✔
Drug design and disease treatments
✔
Brain study
✔
Pandemic follow up and forecast
✔
Routing design in Internet
✔
Intra- and inter-organization issues in society
✔
Financial and market dependencies among companies
✔
Social influencer detection and measurements
✔
Biologic very diverse applications
✔
etc., etc....
Handbook of Graphs and Networks: From the P. Csermely, Weak Links: The Universal Key to the
Genome to the Internet (Wiley-VCH, 2003). Stability of Networks and Complex Systems (The
Frontiers Collection) (Springer, 2006), rst edn.
S. N. Dorogovtsev and J. F. F. Mendes, Evolution M. Newman, A.-L. Barabasi, D. J. Watts, The Structure
of Networks: From Biological Nets to the Internet and Dynamics of Networks: (Princeton Studies in
and WWW (Oxford University Press, 2003). Complexity) (Princeton
University Press, 2006), rst edn.
F. Kopos, Biological Networks (Complex Systems E. Ben Naim, H. Frauenfelder, Z.Torotzai, Complex
and Interdisciplinary Science) (World Scientic Networks (Lecture Notes in Physics) (Springer, 2010),
Publishing Company, 2007), rst edn. rst edn.
https://github.com/gephi/gephi/wiki/Datasets
* Network Repository
http://networkrepository.com/
http://snap.stanford.edu/data/
https://networkdata.ics.uci.edu/resources.php
https://aminer.org/data-sna
http://www-personal.umich.edu/~mejn/netdata/
http://www.networksciencebook.com/translations/en/resources/data.html
https://github.com/chatox/networks-science-course/tree/master/practicum/data