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BP0423 022-029 PeerReview Chromatography Ypso (Web Watermark)
BP0423 022-029 PeerReview Chromatography Ypso (Web Watermark)
Purification of Protein by
HIC: Mechanistic Modeling
for Improved Understanding
and Process Optimization
LUCRÈCE NICOUD, YOHANN LE GUENNEC, EDOUARD NICOUD,
ANTONIO CARDILLO, ELENA LIETTA, ELISA INNOCENTI, AND ALESSANDRO PIERI
ABSTRACT
Hydrophobic interaction chromatography (HIC) is a separation technique widely
used for the purification of therapeutic proteins. The main leverages identified
to operate HIC processes are solution pH and ionic strength. In this article, the
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authors show that simplistic mathematical models derived from statistical analysis
cannot describe the impact of pH and ionic strength observed in HIC processes.
A new mechanistic model accounting for the protein charge in solution (varying
with pH) and the solution non-ideality (activity coefficient varying with the ionic
strength) is proposed here. This simple model is shown to accurately describe
experimental data and paves the way for numerical optimization of HIC processes.
H
ydrophobic interaction chro- be applied in a straightforward manner
matography (HIC) is widely to HIC. In another study, a HIC model
used for the purification of inspired by a complexation mechanism with
therapeutic proteins (1,2), ligands has been proposed (5). This model
Lucrèce Nicoud*, lucrece. in particular for aggregate removal (3). has the advantage of allowing the predic-
nicoud@ypso-facto.com, is Designing a HIC process requires deter- tion of the mean retention coefficient with a
head of product; Yohann Le mining numerous operating parameters rather limited number of model parameters,
Guennec is project manager; such as buffer pH, buffer ionic strength, but it does not provide a way to explic-
and Edouard Nicoud is loading volume, f low rate, and others. itly describe the impact of pH and ionic
head of customer success; Simulation can be used as a tool to investi- strength on chromatograms.
all at Ypso-Facto, France.
gate different operating conditions digitally In this article, the authors propose a sim-
Antonio Cardillo, PhD, is
and thus reduce the experimental burden. It ple chromatographic model capable of pre-
expert scientist & GSK fellow;
Elisa Innocenti is scientist;
can also be used to perform process optimi- dicting the impact of pH and ionic strength
and Alessandro Pieri, PhD, zation and reduce the environmental impact, on HIC chromatograms. This mechanistic
is scientific leader & GSK in particular by decreasing raw materials model is based on the dependence of the
associate fellow; all at GSK, consumption and waste generation. protein charge with pH and on an explicit
Italy. Elena Lietta, PhD, is Existing HIC models are often inspired expression of the protein solution activity
from Politecnico di Torino, by the protein solubility behavior observed coefficient with the ionic strength. The
Duca degli Abruzzi, Italy. in solution (1). An interesting study treats model is first tested on literature data. Then
salt-induced protein precipitation as a liq- it is applied to a set of experimental data
uid–liquid phase separation with a pro- generated by GSK. Finally, it is used to per-
To whom all correspondence
*
should be addressed.
tein-poor supernatant and a protein-rich form process optimization.
precipitate (4). A theoretical model capa-
ble of accounting for both pH and ionic MATERIALS AND METHODS
PEER-REVIEWED strength effects was derived. However, Experimental part
Submitted Sept. 15, 2022 this model counts many model parameters Materials. A mmon iu m su l fate w a s
Accepted: Dec. 8, 2022. that are difficult to estimate and cannot purchased from Carlo Erba Reagents
experiments performed at different Figure 1. Impact of pH and ionic strength on the protein retention quantified
f low rates under non-binding condi- in terms of the lumped Henry coefficient. Experimental results are represented
with symbols and calculations with lines. The experimental data were extracted
tions (van Deemter plot).
from Heinitz et al. (14) for the ionic strength impact (left) and from Xia et al. (15)
Rega rding the data that were for the pH impact (right). Results were obtained with two different proteins in
extracted from the literature (14,15) isocratic conditions. For the ionic strength impact, experiments were performed
to perform preliminary tests of the with chymotrypsinogen. A 20 mM phosphate buffer was used with varying
model, only the peak positions were concentrations of sodium chloride (NaCl) and sodium sulfate (Na2SO4). For the
reported in the origina l articles pH impact, experiments were performed with a high isoelectric point (pI) α–
amyloglucosidase using a 1 M Na2SO4 solution. Two calculation methods were
(and not the full chromatograms). used: statistical (top) and mechanistic (bottom).
Therefore, only the thermodynamic
parameters described in the earlier
paragraphs were estimated, and not
the hydrodynamic/kinetic parameters.
Simulations. All simulations pre-
sented in this article were performed
with the specific software (Ypso-Ionic).
pH (right). The dots represent the coefficient are calculated, which does ping with water. Three peaks are
experimental data and the lines the not make sense physically. observed in the UV profile, the first
calculations. In examining the exper- Considering panels (c) and (d) of t wo during the elution phase and
imental results, it is observed that the Figure 1, it is observed that the sim- the last one during the regeneration
lumped Henry coefficient goes through ple mechanistic model proposed in this phase. The perturbations of the UV
a minimum as a function of the ionic article represents well the experimental and conductivity signals at the begin-
strength. At low ionic strength, the trends of the lumped Henry coefficient ning of the experiment were caused
retention is found to decrease with the with the ionic strength and solution pH. by a temporary malfunction of the
salt concentration. This phenomenon In the rest of the article, the mechanis- system (probably due to the pres-
is referred to as a “salting-in” effect. At tic model is applied to novel experimen- ence of an air bubble) and were not
high ionic strength, the retention is tal data. It is challenged against the full observed in subsequent runs.
Figure 2. Results of the reference experiment (a) experimental ultraviolet (UV) charge variants was guessed based
and conductivity profiles together with the percentages of low molecular on the SEC analysis of the chro-
weight (LMW), monomer (Mono), high molecular weight (HMW) species
matogram of the reference exper-
determined by size exclusion chromatography (b) simulation results showing
the species taken into account. iment. T he fol low ing resu lts
were obta ined: L M W1 (0.66%),
LM W2 (2.56%), LM W3 (4.88%),
Mono1 (10.61%), Mono2 (43.90%),
Mono2bis (14.63%), Mono3 (8.46%),
HMW1 (0.26%), HMW2 (3.11%),
and HMW3 (10.93%).
The simulation of the reference
experiment (Run 1) with all the
considered spec ies is show n in
Figure 2b. The procedure used to
deter m ine model pa ra meters is
described in the materials and meth-
ods section. Briefly, the main param-
eters to be determined for each species
k are the Truesdell-Jones coefficients
Ak, Bk, Ck and the coefficient λk of the
adsorption isotherm. To reduce the
number of fitting parameters, it was
assumed that all species eluting in a
given peak have the same Truesdell-
Jones co-eff icients (e.g., LM W1,
Mono1, and HMW1 have the same
coefficients). In addition, it was con-
sidered that λ k = 1 for all species,
except Mono2bis, for which the λk was
estimated to be 1.2. The results of the
fitting for the five runs are presented
in terms of lumped Henry coefficient
For each of the three peaks, frac- species based on different physical as a function of the ionic strength in
tions were collected and analyzed properties, namely charge/hydropho- Figure 3a. The results of the charge
by SEC to qu a nt i f y t he Mono, bicity and size. As a consequence, as a function of pH are presented in
L M W, a nd H M W species. T he representing the crude as a mixture Figure 3b. As described in the mate-
analyzed results are presented in of Mono, LMW, and HMW is not rials and methods section, the pKa val-
Figure 2a. Interestingly, Peak 1 and suff icient. It is necessary to intro- ues and number of accessible aspartic/
Peak 2 have similar compositions, duce additional species, which are glutamic acids and histidine residues
with around 90% of Mono. Peak 3 likely to be protein charge variants. were adjusted compared to their theo-
contains around 65% of impurities Accordingly, the authors considered retical values to allow a better descrip-
(LMW+HMW) and 35% of Mono. LM W1, LM W2, and LM W3 for tion of experimental results.
These results show that the three the LMW species eluting in Peak The total protein concentration
species identif ied by SEC (LMW, 1, Peak 2, and Peak 3, respectively. (experimental and simulated) for
Mono, HMW) co-elute in the three Similarly, they considered HMW1, the reference experiment is shown
peaks observed in HIC. It is thus not HMW2, and HMW3 for the HMW in Figure 4 (Run 1). It is seen that
possible to match the peaks observed species eluting in Peak 1, Peak 2, the model allows correctly predict-
in HIC with those observed in SEC and Peak 3, respectively. For the ing the overall shape of the chroma-
(e.g., associate Peak 1 with LMW, Mono, two charge variants in Peak togram, with three peaks, the last
Peak 2 with Mono, and Peak 3 with 2 were considered in an attempt to one being much narrower than the
HMW). This can be explained con- describe peak broadness. The com- first two. The retention times of the
sidering that HIC and SEC separate position of the crude in terms of peaks are accurately described, while
Figure 3. (a) Experimental and simulated values of the lumped Henry coefficient as a function of the ionic strength at
pH 6.0, 7.0, and 8.0 for the species eluting in peak 2. The lumped Henry coefficient is equal to the activity coefficient
(Truesdell-Jones equation) because λ is equal to 1.0. (b) Calculated protein charge as a function of pH. The dots correspond
to the protein charge fitted to describe the experimental values of the lumped Henry coefficients.
Figure 4. Impact of the ionic strength (modulated by the % B) and pH: (a) experimental chromatograms at different ionic
strength values; (b) simulated chromatograms at different ionic strength values; (c) experimental chromatograms at different
pH values; (d) simulated chromatograms at different pH values.
their broadness could be improved. erature (16); it is regarded as out of dicted thanks to the Truesdell-Jones
The separation between Peak 1 and the scope of the present study. equation (Figure 3a). This behavior
Peak 2 is indeed underestimated. A is referred to as a “salting out” effect
reduction in the characteristic time Impact of key (in contrast to the “salting in” effect
for mass transfer of Mono2 was con- operating parameters observed at low ionic strength).
sidered to improve peak resolution. Ionic s trength. The left-hand Solution pH. The right-hand side
However, the broadness of Peak 2 side of Figure 4 shows the impact of Figure 4 shows the impact of pH
was then signif icantly underesti- of the ionic strength on the chro- on the chromatograms: experimental
mated. A plausible explanation is matograms: experimental (top) and (top) and simulated (bottom). In the
that more than two charge variants simulated (bottom). It is observed investigated pH range, the higher the
need to be considered to describe the that the higher the %B (and thus the pH, the more retained are the species.
observed peak broadness. The impact lower the ionic strength), the more This is related to the variation of the
of multicomponent mixtures on peak retained are the species. This is due to charge of the protein with solution
broadness has been studied experi- an increase in the activity coefficient pH (Figure 3b). Although the curve
mentally and theoretically in the lit- at high ionic strength, which is pre- seems flat in the pH range of interest,
Figure 5. Prediction of the impact of the ionic strength (%B) and solution pH. Conditions used to fit the model are
represented in black, while conditions fully predicted by the model are in red.
a slight decrease of the protein charge fit the model are represented in black, mediate situation obtained with pH
with pH is actually obtained: z = 5.11 while conditions fully predicted by the 6.0 and 28 %B without reducing the
at pH 6.0, z = 4.94 at pH 7.0, and model are in red. elution time. This is considered for
z = 4.32 at pH 8.0. This is sufficient The choice of “optimal” process comparison purposes but has no real
to describe the increase in retention conditions must be done consider- practical interest.
observed in HIC experiments. ing given targets and constraints. Process performances (recover y,
Overall, the peak positions and I n t he c a s e of u nder i nve st ig a- p r o du c t i v it y, s ol v e nt c on s u mp -
shapes of the five performed experi- tion, one can consider two options: tion) are quantif ied in Figure 5
ments are well represented by model the collection of Peak 2 only, lead- for the three options. When mov-
simulations. The proposed model is ing to a product of Grade 1 purity, ing from option (a) to option (c),
thus capable of describing the impact or the collection of Peak 1 and 2 t he product iv it y is inc reased
of t wo key operating parameters, simultaneously, leading to a product by a fac tor of t wo a nd t he sol-
namely ionic strength and solution of Grade 2 purity. vent consu mpt ion reduced by a
pH. The model was also shown to be To obtain Grade 1 purity, pH 7.0 factor of two.
capable of describing the impact of and 18 %B seem the most appro- This study illustrates how simu-
loading volume and f low rate (data priate conditions to ensure a good lation can help to perform process
not shown). A more ref ined ver- separation bet ween the f irst t wo optimization, increasing productivity
sion of the model would consist in peaks. This is highlighted as option and reducing solvent consumption.
improving the description of peak (a) in Figure 5. To obtain Grade 2
broadness, potentially by including purity, pH 6.0 and 28 %B seem the CONCLUSION
more charge variants. most appropriate conditions to allow A simple mechanistic model of HIC
a gain in productivity and decrease has been developed based on the
Illustration of in solvent consumption. Indeed, curve of the protein apparent charge
process optimization the elution time can be sig nif i- as a function of pH and the use of an
Once model parameters are deter- cantly reduced while still obtaining a activity coefficient in solution.
mined, the model can be used to pre- good separation between the f irst It was show n that the model
dict unexplored operating conditions. two peaks and the third peak. This is allows predicting the impact of ionic
This predictive capability is illustrated highlighted as option (c) in Figure 5. strength (%B) and solution pH on the
in Figure 5, where conditions used to Option (b) corresponds to the inter- position and shape of chromatograms.
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zation can be performed with a view Computer Program for Calculating Effect of pH Changes on Water
to improving process performances Chemical Equilibria of Natural Waters. Release Values in Hydrophobic
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Kopaciewicz, W.; Regnier, F. E. 16. Pfister, D.; Morbidelli, M.; Nicoud,
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