Professional Documents
Culture Documents
Glycolysis
EMP
EMPPATHWAY
paway
FED State >
insulin ; catabolic pathway occ.in cytoplasm
occurs in ALL cells
ONLY pathway in both aerobic + anaerobic > glucose : ONLY molecule to produce ATP
without 02
"
NAD NADH ADP ATP
7
; Pi phosphoglycewkinase ; Mg
isomerase
pyruvate kinase
-
O -
C=O ge -
O -
C -0
1 1 I
C=O
kt C -
O -
P H - C -
O -
p
I 11 1
C C HO -
C
Important points : DHAP >
also used for TG synthesis
glucose >
GGP : flux generating step ; high reaction velocity + bow km
HK
+
NADH NAD
7
COOH COOH
1 I
C. = 0 C- OH
I 1
C C
-
AEROBIC SLP 4 ATP
Energetics of Glycolysis >
: >
used >
2 AM
Cori’s Cycle
muscle
exercising > anaerobic glycolysis
muscle liver
gluconeogenesis
11
pyruvate pyruvate
"
LDH LDH
✓ blood
/
GLUCOKINASE : HEXOKINASE :
1,3 BPG
mutase
-12
Mg 2,3 BPG > releases 02 from
AIP <
HBA ONLY
× Pi 1-120 . . . . . . . . . . .
:
^
3 PG <
× ÷
Inhibitors of Glycolysis
COMPETITIVE INH .
: NON -
COMPETITIVE INH .
:
arsenite : PDH ;
ketoglutarate dehydrog.
( arsenate )
> but there is a loss of > ATP
"
NO NADH >
NO SLP
v >
.
'
. loss of > ATP _
'
NAF : blood glucose estimation
Regulation of Glycolysis
PFK -1 : only allosteric modulation v15 pyruvate kinase
ADP
u
glucagon
insulin
dephosphorylation
+
FGP
PFKI <
f- 1. Gbp .
PFKII : bifunctional
+ "
v PFKII +
Linkreaction
Link reaction
location of reaction : Mt matrix
.
; location of PDH : IMM
"
CoA NAD NADH
-
,
req Of oxid decarboxylation
. .
:
pyruvate i
> acetyl CoA
.
By : TPP
° °
11
PDH complex
"
11
-
Bz : FAD
c- c- COOH
•
coz C -
C -
S -
CoA .
Bz : NAD
•
Bg : CoA
lipoic acid
-13
dihydwlipoyldehydrog .
<
-
As
dihydrolipoyl transacetylase _
PFK -1 :
only allosteric mod .
PK : both allosteric + COV .
> @ IMM
I
pyruvate formed in cytoplasm >
enters mitochondria by pyruvate H+ symport -
PFK 11 :
bifunctional enzyme E activities of 2 enzymes : phospho truck kinase 11
> >
ANAEROBIC v
\
TCA cycle
v u
C- & -
COOH >
C -
C -
COOH 0 % ethanol
^
11
C -
C -
pyruvate :
mainly derived from carbs .
: fats can never be converted to carbs
except 2
products of TG breakdown :
glycerol glucogenic
-
>
propionic acid
-
_
Regulation of PDH
\/ \/
ALLOSTERIC END -
PRODUCT INHIBITION : COVALENT MODIFICATION :
>
ATP "
-
XD
-
MCC of congenital tactic acidosis
-
brain : sensitive to acidosis > neuro
degen .
; spasticity ; early death
•
Px : no specific Px > carbohydrate restriction + 131 supplement
Kreb’s
Kreb’s cycle
cycle
"
TCA cycle ; citric acid cycle : .
amphibolic > Oxidative +
synthetic react
-
activated by neither ; both fed +
fasting
'
in mitochondria ; in all cells c- mitochondria
'
availability of 017A >
OAA : carrier
CO2 ; ATP ; By
pyruvate s
>
OAA .
pyruvate carboxylase @ mitochondria
pyruvate carboxylase
0 0 A : ATP
11
> req .
11
C- C- COOH > HOOC -
C -
C -
COOH B :B > biotin
C : CO2
B.
I 1
S CoA
☆
☐ = C - -
OH
c=o HOOC -
C -
1 I
& HOOC -
C
COOH
containing enz .
citrate isocitrate
_
HOOC -
C -
aconitase HOOC -
C -
OH
I
HOOC -
C -
OH HOOC - {
I 1
HOOC -
C HOOC -
C
ketoglutarate
" 00C -
C -
otiisoa.ba/edehydwgenage- COOH
I
rate
1
HOOC -
c • oxidised
c=o limiting
l v I
HOOC -
C -12 -12 C
seq Mg or Mn
,
• .
coz
C
1
COOH -
4. OXIDATIVE DECARBOXYLATION :
d-
ketoglutarate > succinyl CoA rate
✗ KG
COOH dehydrogenase + COA 0=C -
s -
CoA limiting
1 ^ I
oxidised +
4=0 f
→
• irreversible
C
{
coz -13
As
,
C COOH _
COOH
5. SLP : thiokinase :
ligase
GDP GTP CoA
%inag#-
→ ,
0 = C -
S -
CoA COOH
I 1
C C
1 • I
high energy bond
C
c
1
I
COOH
COOH
6. OXIDATION ONLY
FAD
_
FADHZ
succinate fumarate
COOH _g☐ COOH
I 1
C C
'
11
f f
COOH
COOH
7. HYDRATION STEP : fumarase : lyase
1-1+01-1
-
fumarate malate
I
1
COOH
COOH
8. OXIDATION ONLY
NAD NADH
-1
malate \ OAA
COOH
I
_ma1a1edehydW9eⁿÉ COOH
1
C- OH C=O
I • oxidised 1
C C
1 1
COOH COOH
SLP : I >
1
no -
2 only Oxid .
> I ✗ NADH 1- 1 FADHZ
1 glucose > 7+5+20 ATP : 32 ATP
v v v
-
d-
ketoglutarate dehydrogenase
↑ succinyl CoA
i.
'
. . "
11
OAA +
f-Louro acetyl CoA > f-louro citrate
> common ;
}
as
glucose
fatty acids are metals . to acetyl CoA (or ) TCA interned .
amino acids
hyper NHq
-
emia : depletes ✗ -
KG levels
\/
binds to glutamine
> excess NH
} glutamate >
=
↓ ↓ glutamate levels
v
compensated by amination ✗ KG
of glutamate
-
>
Inhibitors of TCA cycle
v v
CI : NCI :
enzyme in 13 oxdn of
-
FA
i
carrier of TCA cycle : 017A .
Glycolysis inin
Glycolysis
cancer
Cancer cells
ces
PFK I -
: allosterically activated by 1--2,6 BP ; inhibited by ↑ ATP ; citrate
CA cells PARADOX
Warburg’s Effect >
Occurs in ; :
lactate
even in presence of Oz :
glucose >
v v aerobic glycolysis
aerobic glycolysis
.
: in CA cells : aerobic glycolysis c- lactate as end product
9-
glucose :
only 2 ATP
Shules
Shuttles
to move substrates b/w mitochondria ; cytoplasm
Malate-Aspartate Shule
OUTLINE :
> more important in :
OAA 017A
^
CYTOPLASM MITOCHONDRIA
IMM
aspartate , aspartate
✗ -
ketoglutarate ✗ -
ketoglutarate ,
^
SGOT SGOT
v
glutamate glutamate
OAA OAA
"
NADH NADH
t
malate malate
malate >
malate
Glycerol-PO4 Shule
BRAIN ; 5K MUSCLE
.
1. 2 .
C- OH C- OH
1 I
DHAP <
DHAP
c=O c=O
I 1
C -
O -
Poa C -
O -
Poa
^
glycerol -
3P NADH FADHZ , glycerol 3P
"
dehydrogenase red
dehydrogenase
× > NAD FAD
c- OH C- OH
1 I
G-0131° ← G- 01313
c- OH > c- OH
I 178$11 I
C- 0-1204 C -
O -
Poa
Citrate Shule
to transport acetyl CoA from mitochondria > cytoplasm for FA synthesis
( formed by LINK REACTION
citrate <
citrate < 01717 +
acetyl CoA
^
citrate synthase
citrate lyase
✗
"¥1m
>
used for FA synthesis
☆ 1. mitochondria
2. Cytoplasm
Creatine-PO4 Shule
to move ATP from mitochondria > cytoplasm ; CK : creatine kinase
cyt .
CK
→
ADP + creatine Poa
1-
mt CK .
Mt . MATRIX ATP
.
AtP☆g☆&FFEfffg
↳O☆%% ✓
App
^
-
atractyloside
Electron
Electron
transport chain
Transport Chain
Components of ETC
5 protein complexes : I -
V I -111 inv in e- transport ;
V : ATP synthase
,
.
protein comp .
cytochrome C ,
not lying in IMM
⑧
-
H : hydride → + •
2é 111 : cyt oxidase
.
drug : oligomycin
flow of electrons cyt -
C
-
"
FMN + Fe s
-
1-
> Cu
,
I ^ 111 111 V
11 Q cyt -
B ;C
Fe s-
FAD + Fe -
S V
O
2
flow of e- occurs due to REDOX potential > tendency to gain e-
i. ETC : redox potential ↑↑ in the direction of flow of e-
of Oz : maximum
+ +
a
41-1 41-1-1, a
21-1
-12e-
2€
-
1- L
NADH NAD
-
2C
+ -1 +
41-1 41-1
1/202
+
1 NADH
gives hydride ion to cmplx I 41-1-1 > 21-1-1 + 21-1-1
-
H : 2 e-
. . v
4 H+ H2O
_
2C pump out
INADH
- '
2C : : . .
= 2C =
+
111 : 41-1
+ "
111 : 41-1-1 >
21-1++21-1 ,,
for H2O prod
+
41-1 21-1-1
^ ,,
=
. ✓
" e-
-
2C
s
2é
^
FADHZ FAD v
41-1-1
-
Ze
+
+
I FADH,
-
= 2e = 41-1
4202
+
through complexes 11 H movement
-
Ze : no +
+
111 : 41-1 41-1-1 >
21-1-1 + 21-1-1
111 : 21-1-1 '/
.
-
.
IFADHZ : 61-1-1 H2O
+
movement of 41-1 from IMS to matrix = 1 ATP
+
.
'
.
I NADH : 101-1 : 2.5 ATP
ADP -
ATP TRANSLOCASE : @ IMM ; flip-flop mechanism to transfer ATP into IMS
-1
and ADP into Mt . matrix
-
atraclyloside
ADP -
ATP translocase : seen in creatine -
P shuttle ; to move ATP from mitochond .
to cytoplasm
Uncoupling of ETC
coupling reaction : OXIDATIVE PH RYLATION
.
v v
in the presence of
THE RMOGENIN protein @ BROWN FAT , NO PH RYLAN ON
.
NO ATP
+
to H movement
energy produced due
the
called as NON -
SHIVERING THERMOGENESIS
> PHYSIOLOGICAL :
thermogenin LC FFA
thyroxine
Inhibitors of ETC
COMPONENT INHIBITORS
1 : NADH
dehydrogenase rotenone ; piercidin A : insecticides
111 : cyt -
111 : cyt -
ATP -
ADP translocase atrackloside
Hyperuricemia :
competes c- urine excr -
of uric acid
<
lactic acidosis <
MELAS
like syndrome
due to ETC -
complex 1 IV deficiency
V v v
of gluconeogenesis
glucose ,
GGP .
× PDH
^
isomerase carboxylase pyruvate
^
" L
FGP ,
017A
CYTOPLASM PEP
7
^
✓
<
FI ,6bP '
>
G3P< > 1,3 BPG 3PG ? > ZPG <
aldolase A dehydwg .
phgly .
Kinase isomerase enolase
FASTING STARVATION :
pyruvate >
>
01717 ( cannot cross IMM .
.
: OAA > malate )
py .
carboxylase ; B>
^
COOH COOH
I + I
C. = O C = 0
1 1
acetyl CoA
C
f
- COOH
2 . <
PDH NADH
mt .
malate
dehydrogenase
1-
NAD
d-
{ -
OH
1
cytoplasmic malate > NADH
{ dehyrogenase v
COOH
3. in cytoplasm : OAA
GTP GDP
7 nC°2
017A PEP OAA
>
PEP carboxy -
kinase Poa donor : GTP
I I
PEP
C. =D C -
O -
p
I • It 1-
GDP
C C
, •
CO2
COOH
5. to 9 . PEP-zo-i.FI ,
GBP
10 ; 11.
.
Pi
^
F1 , Gbp >
FGP > GGP
f- 1. Gbptase isomerase
v via
✗ V V V V V
glucogenic AA
1.
lactate
# pyruvate > gluconeogenesis
LDH
COOH COOH
1 I
C- OH C =D
I
1
C
C
2-
dehyd .
C- OH C- OH
gluconeogen .
I 1
OH
G- c=0
I
C- O -
P
C -
O -
P
3 .
ATP AMP + Ppi ATP AMP coz
, _
carboxylase
f f {
•
methylmalonyl
mutase ; 1312
v
gluconeogen .
<
OAA fo r succinyl CoA
TCA steps COOH
I
C
I
C
I
0 = C -
S -
CoA
4 .
AA ( total : 20 )
>
; KB
+ 5
acetyl CoA TCA interned ; .
pyruvate
GLUCOGENIC
v u
'
leucine all the remaining P : phenylalanine
'
lysine AA 1 : isoleucine
T : tyrosine ; threonine
tryptophan
Reciprocal Regulation
Of glycolysis +
gluwneogen .
+
" "
-11=2 Gbp
+
FGP ,
"
+ -
PFK I
-
u inhibited
F1 ,6bP :
glycolysis continues
1=1,6 BP glycolysis
Fructose Mania >
:
1--1,6 BP tase
-
:
gluconeogenesis
f- 2. Gbp -
Ease : active in CA
TIGAR : TP53 induced Glycolysis &
Apoptosis Regulator
TIGAR :
regulates glycolysis +
apoptosis in CA cells .
CA mutation
+
i.
codes for
v
\/
f- 2. Gbp Ease
-
activity
1-
F2,bbP,,FGPg
activation of PFK I -
replication
CA cell apoptosis < fails <
Glycogen
Glycogen
storage form of carbs +
energy
glycogen V. fats as
energy storage form :
-
fats cannot be metals .
anaerobically
'
fats > glucose >
blood
glucose levels cannot be maintained
'
fats cannot cross BBB
↑ H2
•
×
¥
OH -
glu
brain
Linkages in Glycogen
straight chains : ✗ 2 >
4
GCHZOH
to non -
reducing end
1
OH
5
✗ -
glucose :
¢ ,
(✗ : -
OH downwards @ functional É )
3 2
OH
✗ (I > 4 :
CHZOH CHZOH
I I
O H H O H
+
-
OH OH -
OH
☒ 1-120
CHIH CHIH
"
H
non -
non -
glucose
ATP
hexokinase : muscle
glucokinase : liver
<
ADP v
GGP
mutase
"
GIP
UTP
UDP-glucose ph.sn/lase
'
2x Pi < Ppi v
pyroph tase
.
UDP-glucose
RLE regulatory
glycogen synthase : +
branching enzyme
v
( not mitochondria )
reducing end
glycogen ph rylase -
0-0-0-0-0-0-0
>
n ✗ PLP 90-1 .
glucose residues
2. glucan transferase : transfers 3 glucose residues from the pre v. chain to another
to expose ✗ (I →
G) branch pt .
0-0-10-0-0-0-0 • 0-0-0-0-0-0-0-0-0-0
> to
glucan
0
① transferase y 10-1
.
BI debranching
FUNCTIONAL :
glucan transferase +
activity
-
.
contraction
Q .
under anaerobic conditions ,
no .
Of ATP produced from glycogen 0 lysis :3
1 ATP saved
Common Enzymes
V X
glycolysis +
glycogenesis :
glycogenesis +
glycogen olysis :
hexo
glucokinase mutase v
glycogen olysistgluconeogen .
GGP tase
-
Catabolic state
"
+ ↑↑ CAMP
FASTING > glucagon > adenylyl cyclase >
+
V
" V
V V
+
> glycogenesis > glycogenolysis
Anabolic state
I/
dephosphorylation of <
V v
v v
v v
b : dephosphorylated + inactive
V V
ACTIVATORS : INHIBITORS : -
insulin
'
•
-
NE ; epi '
GGP ; AIP
'
CAMP dephos.in/lation of
'
FIP : only liver
'
5 AMP only muscle protein phosphatase
glycogen ph.ir/lase
' .
: <
>
i. e allosterically
'
5- AMP directly activates
gly.ph rylase by binding
-
to the enzyme ; NOT by ph.in/lation
in liver ; muscle > CAMP independent activation of glycogen olysis
ca -
calmodulin sensitive phosphorylase kinase
Glycogen storage
Glycogen Storage
diseases
Diseases
GGP
1 : von
gierke's glucose 6 ph tase
-
liver
dextrinosis brain
Ease
excess
vÉ v
ribose 5- ph . v "
u KETOMC HYPOGLYCEMIA
uric acid u v
'
lactic acidosis
^
hyper Taenia PRPP
"
↑↑ purines
seq of Pi
. : phosphate gets locked c- GGP ☒ ATP not formed ADP ; AMP > degrade
Complications of Von Gierke’s
pulm . HTN
hepatic adenoma
pancreatitis
renal failure
:
Polycystic ovaries
Osteopenia
Pompe’s Disease
only glycogen storage disease which is also a lysosomal storage disease .
progressive SK .
myopathy 2 years
NO renal
enlargement NO hyperuricemia
/ V15 gierke 's
'
.
>
Von
'
NO lactic acidosis
=
amylopectinoasis < produces amylopectin ( part of starch )
> glycogenolysis :
glucose not formed
i.
diagnostic feature : NORMAL lactate after exercise v
i. NO lactic acid
^^
breakdown for glucose
normally : after exercise lactate levels due to
glycogen
:
for ATP + pyruvate
absent in Mcardle 's
aerobic glycolysis is
muscle
glycogen normal lactate levels
'
. .
v v
ribose 5P is synthesised
gonads
ONLY of RIBOSE 5 PH NEVER in lactating MG
-
source . : non -
'
NO ATP is produced skin
muscle
produces
'
•
irreversible -
reversible
- -
cells that req . NADPH >> ribose 5P : both oxidative + non oxidative phases
occur
- .
cells that req .
ribose 5P NADPH : ONLY non -
oxidative phase occurs
HMP pathway
Pathways that DO NOT produce ATP
.
>
-
RL shunt
-
uronic acid pathway .
✗ -
oxidation
-
oxidn Of VLCFA
EMP HMP
:
glycolysis pathway
"
CO2 prod
ATP used +
produced NEITHER
starts c- GGP
glucose
Oxidative Phase
I. NADP NADPH
-
,
GGP >
6 phospho -
C -
O -
P C -
O -
P
2 .
NADP NADPH
7
6 phospho gluconate -
>
3 keto 6 phospho -
gluconate
Gph gluconate dehydwg
-
.
COOH COOH
I 1
C C
I 1
•
H - C -
OH > C = 0
I 1
C C
I 1
C C
1 I
C- O -
P C -
O -
3. spontaneous decarboxylation :
-
CO2
,
ribulose 5P
3 keto 6 ph .
gluconate >
COOH →
CO2 C
I 1
C
C =D
I
1
C =D >
C
I
I
C
C
1
I
C
1 C -
O -
P
C -
O -
p
OXD .
phase
.
I CO2
is 1 ribulose 5P > 3A
a
Non-Oxidative Phase
3 molecules of ribulose 5P enter ; no .
of carbons 4 rearrangements
5 ribulose 5P 5 ribulose 5P -
transketolase : 2C transfer
•
trans aldolase : 3C transfer
epimerase isomerase
v v
5 xylulose 5P 5 ribose 5P
-12
131 transketolase ; Mg
v
transaldolase epimerase
v v
transketolase
v v
6 GGP
Function of HMP pathway
Glutathione >
tri peptide : glutamate + cysteine +
glycine
d- MHz { -
MHz {
1 I 1
C C -
SH MHz
,
C •
1 due to
COOH seducing prop .
of glutathione is
RBC :
oxidised
glut .
reductase ; glut peroxidase
. :
scleroprotein
132 "
" t
NADP GSH Hzoz has selenocyskine
reduced @ active site
transketolase Bs def .
1- >
-
oxidative stress causes hemolysis
-
hemolytic anemia
-
neonatal jaundice I ad after birth
-
unwnjugated <
bilirubin
↑ ↑ resistance malaria
to falciparum
-
Uses of NADPH
V V V V
-
aromatic comp .
-
steroids
-
alcohols
drugs
-
Uronic
Uronic acid Pathway
acid paway
1 .
pywph.ir/lase
2.
UDP-glucose >
UDP -
CHO CHO
I 1
C C
1 I
C > c
I
1
C
1 C
C I
1 C
CH OH I
2 ☒
COOH
glucose
glucuronic acid
3. D-
glucuronic acid L
gulonale L ascorbic
- -
> >
CHO * CH OH C- gulono -
lactone acid
2
1 ,
c reduction c oxidase
I 1
C C
1 I v
C C
1 absent inhumans
,
c c
l
1
COOH COOH
L xylitol
4 L
gulonale xylulose
- -
. > - -- ±
,
'
Xylulose reductase
-
coz
essential pentosuria
5 . Xylitol >
D- ✗ ylulose > xylulose 5P > enters HMP
>
'
Garrod’s Tetrad
CYSTINURIA : defective di -
basic AA transporter > absorption + reabsorption
of basic AA ; cysteine
ALKAPTONURIA :
homogentisak oxidase
ALBINISM : tyrosinase
galacto kinase
'
ADP v
galactose 1-
IP + UDP -
§
2-
GALT : RLE
UDP galactose +
glucose IP -
> ; .
3.
epimerase
/
galactose → gal
-
IP
aldose reductase
>
IP
ace .
>
•
↑↑ v10 E. coli infection > NEONATAL SEPSIS
>
: @ 5y gal IP ph.in/lase
•
:
-
confirmation :
enzyme assay using RBC becomes active
Lactose synthesis in Mammary glands > @ :
golgi complex
UDP -
galactose +
glucose > gal glu 1312 4)
- → + UDP
=
lactose synthase
lactose
Fructose
Fructose
Metabolism
Metabolism
location : mainly LIVER -
fructose > most LIPOGENIC
sugar
source : sucrose ; monosach .
ATP ADP
,
aldolase A ; aldolase C
aldolase B ✗ >
↑↑ FIP -
✓ v
hepatomeg .