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Byungchan Han
Department of Chemical & Biomolecular Engineering,Yonsei University
May 17, 2016 (Tuesday)
Where Are we?
LCAO Ψ, Coefficient
H2
δ−
AO with the lower energy makes the larger contribution to the bonding MO.
AO with the higher energy makes the larger contribution to the anti-bonding MO.
Bonding σ orbital in HF is mainly F:2pz and the antibonding σ mainly H:1s in character.
Two electrons in the bonding orbital are most likely to be found in the F:2pz orbital,
Partial negative charge on the F and a partial positive charge on the H.
MO Formulation: Energy and Composition
What values of energy must be used for the AO?
Typically it involves with many electron atoms (like F) and the exact energy
Ψ = cA A + cB B is known only after complicate calculations…
Can we estimate the energy from Ionization energy and electron affinity
information?
HF
−I(X) − Eea (X)
2
Ψ MO
HF = cAψ H 1s + cBψ F 2 pz
• The greater the difference in EN the greater the Polar character of the bond.
• For HF = 1.78, For C– H bond = 0.35 (commonly regarded as almost nonpolar)
Electronegativity by Pauling Scale
Mulliken electronegativity scale: the higher electronegative the higher ionization energy and
the higher a higher electron affinity.
χM =
( I + Eea )
→χ = 1.35 χ M − 1.37
P
2
Correlation between the electronegativities by Mulliken (x-axis, in kJ/mol) and Pauling (y-axis).
Chicago 1929
Robert Mulliken
• Nobel prize in Chemistry (1966)
• 1917, B.S. Degree in Chemistry (MIT)
• 1921 Ph.D. Univ. Chicago (separation of
isotopes of mercury by evaporation)
The Variation Principle
• If an arbitrary wavefunction is used to calculate the energy, the value calculated is never
less than the true energy: the basis of all modern molecular structure calculations.
• A systematic way of discussing bond polarity and finding the coefficients in the LCAO
If we vary the coefficients in the Trial Wavefunction until the Lowest Energy is achieved
(by evaluating the Expectation Value of the Hamiltonian for each wavefunction), then
those coefficients will be the Best (Optimum).
∂E ∂E
Ψ = cA A + cB B ∂cA
=0
∂cB
= 0 → Secular Equation
∫ Ĥψ dτ
ψ *
∫ ( c A + c B ) Ĥ ( c A + c B ) dτ
A B A B ⎧α A = AĤA dτ ( ≠ Eo why? ) < 0 → Coulomb Integral
∫
E= = ⎪
∫ ψ ψ dτ ∫ ( c A + c B ) dτ
* 2
⎪α B = BĤB dτ < 0 → Coulomb Integral
A B
⎪ ∫
c ∫ AĤA dτ + c ∫ BĤB dτ +c c ∫ AĤB dτ + c c ∫ BĤA dτ
2 2 ⎨
=
A B A B B A
⎪β = ∫ BĤA dτ = ∫ AĤB dτ → Resonance (Hopping) Integral
c ∫ A dτ + c ∫ B dτ + 2c c ∫ AB dτ
2 2 2 2
⎪
⎪⎩S = ∫ BA dτ = ∫ AB dτ → Overlap Integral
A B A B
∂E
= 0 → (α A − E ) cA + ( β − ES ) cB = 0 ⎡ α A − E β − ES ⎤ ⎡ cA ⎤ ⎡ 0 ⎤
∂cA
⎢ ⎥⎢ ⎥=⎢ ⎥
∂E
= 0 → ( β − ES ) cA + (α B − E ) cB = 0 ⎢⎣ β − ES α B − E ⎥⎦ ⎢⎣ cB ⎥⎦ ⎣ 0 ⎦
∂cB
⎡ α A − E β − ES ⎤ α A + α B − 2β S ± (α A + α B − 2β S )2 − 4(1− S 2 )(α Aα B − β 2 )
det ⎢ ⎥=0 E± =
⎢⎣ β − ES α B − E ⎥⎦ 2(1− S 2 )
The Variation Principle
∂E ∂E ⎧⎪(α A − E ) cA + ( β − ES ) cB = 0
Ψ = cA A + cB B =0 = 0 → Secular Equation ⎨
∂cA ∂cB ⎪⎩( β − ES ) cA + (α B − E ) cB = 0
α A + α B − 2β S ± (α A + α B − 2β S )2 − 4(1− S 2 )(α Aα B − β 2 )
E± =
2(1− S 2 )
⎧ α +β α +αB 1 ⎛ 2β ⎞
2
E =
⎪⎪ + 1+ S E± = A ± (α A − α B ) 1+ ⎜
αA = αB = α → ⎨ → E+ < E− 2 2 ⎝ α A − α B ⎟⎠
⎪ E− = α − β
⎪⎩ 1− S
Ψ = cA A + cB B α A + α B − 2β S ± (α A + α B − 2β S ) − 4(1− S 2 )(α Aα B − β 2 )
2
E± =
2(1− S 2 )
⎧ β2
⎪ E+ = α A + α − α
⎪
When α A − α B ≫ 2 β →
A B
⎨
⎪E = α − β
2
⎪⎩ − B
αA −αB
The the energy difference |αA − αB| between the interacting atomic orbitals increases the bonding
and antibonding effects decrease.
When the energy difference is very large, the energies of the resulting molecular orbitals differ only
slightly from those of the atomic orbitals.
The strongest bonding and antibonding effects are obtained when the two contributing orbitals have
closely similar energies. —> The difference in energy between core and valence orbitals is the
justification for neglecting the contribution of core orbitals to bonding. The core orbitals of one atom
have a similar energy to the core orbitals of the other atom; but core–core interaction is largely
negligible because the overlap between them (and hence the value of β) is so small.
Coefficients
∂E ∂E ⎧⎪(α A − E ) cA + ( β − ES ) cB = 0
Ψ = cA A + cB B =0 = 0 → Secular Equation ⎨
∂cA ∂cB ⎩⎪( β − ES ) cA + (α B − E ) cB = 0
α A + α B − 2β S ± (α A + α B − 2β S ) − 4(1− S 2 )(α Aα B − β 2 )
2
E± =
2(1− S 2 )
⎧ αA − E
(α
⎪ A − E ) c A + ( β − ES ) c B =
β − ES
cA cA =
1
⎨ ⎧⎪ ⎛ α − E ⎞ 2 ⎛ αA − E ⎞
⎪ ψ *ψ dτ = c 2 + c 2 + 2c c S = 1 −
⎩∫
⎨1+ ⎜
A
⎟ 2S ⎜⎝ β − ES ⎟⎠
⎪⎩ ⎝ β − ES ⎠
A B A B
In H-F (using H1s and F2pz orbitals as a basis) we set αH = −13.6 eV and αF = −17.4 eV. Ψ + = 0.28ψ H + 0.96ψ F
For β = −1.0 eV as a typical value and S = 0, E+ = −17.6 eV and E− = −13.4 eV. Ψ − = 0.96ψ H − 0.28ψ F
Coefficients
∂E ∂E ⎧⎪(α A − E ) cA + ( β − ES ) cB = 0
Ψ = cA A + cB B =0 = 0 → Secular Equation ⎨
∂cA ∂cB ⎩⎪( β − ES ) cA + (α B − E ) cB = 0
α A + α B − 2β S ± (α A + α B − 2β S ) − 4(1− S 2 )(α Aα B − β 2 )
2
E± =
2(1− S 2 )
⎧ αA − E 1 Ψ + = 0.24ψ H + 0.97ψ F
(α
⎪ A − E ) c + ( β − ES ) c =
β −
cA cA =
⎧⎪ ⎛ α − E ⎞ 2
A B
⎨ ES ⎛ αA − E ⎞ Ψ − = 0.97ψ H − 0.24ψ F
⎪ ψ *ψ dτ = c 2 + c 2 + 2c c S = 1 ⎨ ⎜
1+ A
⎟⎠ − 2S ⎜⎝ β − ES ⎟⎠
⎩∫ A B A B ⎩⎪ ⎝ β − ES
HF
For a Heteronuclear Diatomic Molecule with S = 0
⎧ ⎧ 1
α + α 1 ⎛ 2 β ⎞
2
c
⎪ A =
⎪ E+ = A + (α A − α B ) 1+ ⎜ ⎧ ⎫⎪
2
⎛ α − ⎞
B
⎪ ⎪
⎝ α A − α B ⎟⎠
E
⎪⎪ 2 2 ⎪ ⎨1+ ⎜
A
⎟⎠ ⎬
⎨ →⎨ ⎪⎩ ⎝ β ⎪⎭
⎪ ⎪
2
αA +αB 1 ⎛ 2β ⎞
⎪ E− = − (α A − α B ) 1+ ⎜ ⎪c = ⎛ α A − E ⎞ c
⎪⎩ 2 2 ⎝ α A − α B ⎟⎠ ⎪ B ⎜⎝ β ⎟⎠ A
⎩
In H-F (using H1s and F2pz orbitals as a basis) we set αH = −13.6 eV and αF = −17.4 eV.
For β = −1.0 eV as a typical value and S = 0, E+ = −17.6 eV and E− = −13.4 eV.
Polyatomic Molecules
Unlike Diatomic molecules the Polyatomic molecules have greater ranges of shapes:
Linear, Planar, Angular structures
Bond Angles and Bond Lengths are determined by ground state energy
Conjugated system
• a system of connected p-orbitals with delocalized
electrons in molecules with alternating single and
multiple bonds, which in general may lower the
overall energy of the molecule and increase stability.
• Lone pairs, radicals or carbenium ions may be part of
the system. The compound may be cyclic, acyclic,
linear or mixed. Amphotericin B is an example of a yellow-
colored polyene antifungal (antimycotic) agent.
Note the alternating double and single bonds in
the center
The Hückel Approximation
The π molecular orbital energy level diagrams of conjugated molecules can be constructed
using a set of approximations suggested by Erich Hückel in 1931.
The π orbitals are treated separately from the σ orbitals, and the latter form a rigid framework
that determines the general shape of the molecule.
All the C atoms are treated identically, so all the Coulomb integrals α for the atomic orbitals that
contribute to the π orbitals are set equal.
For example, in ethene, we take the σ bonds as fixed, and concentrate on finding the energies
of the single π bond and its companion antibond.
∂E ∂E
Ψ = cA A + cB B ∂cA
=0
∂cB
= 0 → Secular Equation αA = αB = α
In principle, all the resonance integrals and overlap integrals should be included
The Hückel Approximation
∂E ∂E
Ψ = cA A + cB B ∂cA
=0
∂cB
= 0 → Secular Equation αA = αB = α
⎛⎡ α −E β ⎤⎞ ⎧ E+ = α + β (Bonding Orbital)
det ⎜ ⎢ ⎥⎟ = 0 → ⎨
⎜⎝ ⎢ β
⎣
α −E ⎥⎦⎟⎠ ⎩ E− = α − β (Antibonding Orbital) The Hückel molecular orbital energy level
diagram for the π orbitals of ethene.
The Hückel Approximation
⎛⎡ α −E β ⎤⎞ ⎧ E+ = α + β (Bonding Orbital)
det ⎜ ⎢ ⎥⎟ = 0 → ⎨
⎜⎝ ⎢ β
⎣
α −E ⎥⎦⎟⎠ ⎩ E− = α − β (Antibonding Orbital)
• The frontier orbitals are important because they are largely responsible for many of the chemical
and spectroscopic properties of the molecule.
• For example, we can estimate that 2|β| is the π * ← π excitation energy of ethene, the energy
required to excite an electron from the 1π to the 2π orbital.
• The constant β is often left as an adjustable parameter; an approximate value for π bonds formed
from overlap of two C2p atomic orbitals is about − 2.4 eV (− 230 kJ mol−1 ).
The Matrix Formulation of the Hückel
Method
∂E ∂E
Ψ = cA A + cB B =0 = 0 → Secular Equation
∂cA ∂cB
⎧α A = AĤA dτ ( ≠ Eo why?∵S ≠ 0 ) → Coulomb Integral = HJJ
⎪ ∫
∂E
= 0 → (α A − E ) cA + ( β − ES ) cB = 0 ⎪α B = BĤB dτ → Coulomb Integral
∂cA ⎪ ∫
⎨
∂E ⎪β = ∫ BĤA dτ = ∫ AĤB dτ → Resonance (Hopping) Integral
= 0 → ( β − ES ) cA + (α B − E ) cB = 0 ⎪
∂cB
⎪⎩S = ∫ BA dτ = ∫ AB dτ → Overlap Integral = SAB, SJJ=1
⎡ α A − E β − ES ⎤ ⎡ cA ⎤ ⎡ 0 ⎤
⎢ ⎥⎢ ⎥=⎢ ⎥ ( H AA − ESAA ) cA + ( H AB − ESAB ) cB = 0
⎢⎣ β − ES α B − E ⎥⎦ ⎢⎣ cB ⎥⎦ ⎣ 0 ⎦
( H BA − ESBA ) cA + ( H BB − ESBB ) cB = 0 J = A, B
i = 1, 2
⎛⎡ H H AB ⎤ ⎡ SAA SAB ⎤⎞ ⎡ ci,A ⎤
=⎜⎢
AA
⎜⎝ ⎢ H BA
⎥ − Ei ⎢ ⎥⎟ ⎢
SBB ⎥⎟⎠ ⎢ ci,B
⎥=0 ( H AA − Ei SAA ) ci,A + ( H AB − Ei SAB ) ci,B = 0
⎣
H BB ⎥
⎦ ⎢⎣ SBA ⎦ ⎣ ⎥⎦
( H BA − Ei SBA ) ci,A + ( H BB − Ei SBB ) ci,B = 0
( )
= H! − Ei S! c!i = 0 → Hc
! = S!c! E
i i i
⎡ H AA − Ei SAA H AB − Ei SAB ⎤ ⎡ ci,A ⎤
⎢ ⎥⎢ ⎥=0
⎡ c1,A c2,A ⎤ ⎡ E1 0 ⎤ ⎢⎣ H BA − Ei SBA H BB − Ei SBB ⎥ ⎢ ci,B ⎥⎦
c! = ⎢ ⎥ E=⎢ ⎥ ⎦⎣
⎢⎣ c1,B c2,B ⎥⎦ ⎢⎣ 0 E2 ⎥
⎦
→ H! c! = S!c!E!
The Matrix Formulation of the Hückel
Method
∂E ∂E
Ψ = cA A + cB B =0 = 0 → Secular Equation
∂cA ∂cB
⎧α A = AĤA dτ ( ≠ Eo why?∵S ≠ 0 ) → Coulomb Integral = HJJ
⎪ ∫
⎪α = BĤB dτ → Coulomb Integral
⎪ B ∫
⎡ H AA − Ei SAA H AB − Ei SAB ⎤ ⎡ ci,A ⎤
⎨ ⎢ ⎥⎢ ⎥=0
⎪β = ∫ BĤA dτ = ∫ AĤB dτ → Resonance (Hopping) Integral ⎢⎣ H BA − Ei SBA H BB − Ei SBB ⎥ ⎢ ci,B
⎦⎣ ⎥⎦
⎪
⎪⎩S = ∫ BA dτ = ∫ AB dτ → Overlap Integral = SAB, SJJ=1
⎜⎝ ⎢ H BA
⎥ − Ei ⎢
H BB ⎥
⎥⎟ ⎢
SBB ⎥⎟⎠ ⎢ ci,B ⎥⎦
( )
⎥ = H! − Ei S! c!i = 0 → Hc
! = S!c! E
i i i
⎣ ⎦ ⎢⎣ SBA ⎦ ⎣
⎡ c1,A c2,A ⎤ ⎡ E1 0 ⎤
c! = ⎢ ⎥ E=⎢ ⎥ → H! c! = S!c!E!
⎢⎣ c1,B c2,B ⎥
⎦ ⎢⎣ 0 E2 ⎥
⎦
Matrix Diagonalization
In the Hückel Approximation,
⎛⎡ H =α
=⎜⎢
AA H AB = β ⎤ ⎡ SAA = 1 SAB = 0
⎥ − Ei ⎢
⎤⎞ ⎡ ci,A
⎥⎟ ⎢
⎤
⎥ = 0 → H! c! = cE
! c! −1H! c! = E!
⎜⎝ ⎢ H BA = β H BB = α ⎥ ⎢⎣ SBA = 0 SBB = 1 ⎥⎦⎟⎠ ⎢⎣ ci,B ⎥⎦
⎣ ⎦
One you diagonalize the Hamiltonian Matrix you can find the Energy (Eigenvalues) and then the coefficients
Example: Butadiene
Setup and sole the matrix equations within the HÜckel approximation for the π orbitals of Butadiene.
! c = E!
c! −1H!
1 2 3 4
1 α β 0 0
2 β α β 0
3 0 β α β
4
0 0 β α
1 2 3 4
Example: Butadiene
Setup and sole the matrix equations within the HÜckel approximation for the π orbitals of Butadiene.
By software in general
⎡ 1.62 0 0 0 ⎤ ⎡ α + 1.62 β 0 0 0 ⎤
⎥ ⎢ ⎥
⎢
= α 1! + β ⎢
⎢ 0
0 0.62
0
0
−0.62
0
0
⎥=⎢
⎥ ⎢
0
0
α + 0.62
0
0
α − 0.62 β
0
0
⎥
⎥
=E
⎢⎣ 0 0 0 −0.62 ⎥⎦ ⎢⎢ 0 0 0 α − 0.62 β
⎥
⎥⎦
⎣
By software in general
⎡ 1.62 0 0 0 ⎤ ⎡ α + 1.62 β 0 0 0 ⎤
⎥ ⎢ ⎥
⎢
= α 1! + β ⎢
⎢ 0
0 0.62
0
0
−0.62
0
0
⎥=⎢
⎥ ⎢
0
0
α + 0.62
0
0
α − 0.62 β
0
0
⎥
⎥
=E
⎢⎣ 0 0 0 −0.62 ⎥⎦ ⎢⎢ 0 0 0 α − 0.62 β
⎥
⎥⎦
⎣
⎡ α β 0 β ⎤ ⎡ 0 1 0 1 ⎤ ⎡ 2 0 0 0 ⎤
⎢ ⎥ ⎢ ⎥ ⎢ ⎥
β α β 0 ⎥ 1 0 1 0 0 0 0 0 ⎥
H! = ⎢⎢ = α 1! + β ⎢ ⎥ diagonalization
""""""""""""""""# α 1! + ⎢
0 β α β ⎥ ⎢ 0 1 0 1 ⎥ ⎢ 0 0 0 0 ⎥
⎢ ⎥ ⎢⎣ ⎥⎦ ⎢⎣
⎢⎣ β 0 β α ⎥⎦ 1 0 1 0 0 0 0 −2 ⎥⎦
Eπ = α + 2 β , α , α , α − 2 β
1 α β 0 β
2 β α β 0
3 0 β α β
4
β 0 β α
1
4
2
3
Example: Benzene and Aromatic Stability
1 2 3 4 5 6 6 electrons 2 4
a2u e1g
1 ⎡ α β 0 0 0 β ⎤
⎢ ⎥
2 ⎢ β α β 0 0 0 ⎥
Eπ = α ± 2 β , α ± β , α ± β
3 ⎢ 0 β α β 0 0 ⎥
⎢ ⎥ π-electron binding energy Eπ = 2 β = −460 kJ / mol
4 ⎢ 0 0 β α β 0 ⎥
⎢ Eπ = 2 (α + 2 β ) + 4 (α + 2 β ) = 6α + 8 β
5 0 0 0 β α β ⎥
⎢ ⎥ 3 × Eπisol = 3( 2α + 2 β )
6 ⎢⎣ β 0 0 0 β α ⎥⎦
π-bond formation energy 8 β
Example: Benzene and Aromatic Stability
Aromatic stability can be traced to two main contributions.
First, the shape of the regular hexagon is ideal for the formation of strong σ bonds: the σ
framework is relaxed and without strain: Valence Bond Theory
Second, the π orbitals are such as to be able to accommodate all the electrons in bonding
orbitals, and the delocalization energy is large: Molecular Orbital Theory
⎡ α β 0 β ⎤ ⎡ 0 1 0 1 ⎤ ⎡ 2 0 0 0 ⎤
⎢ ⎥ ⎢ ⎥ ⎢ ⎥
β α β 0 ⎥
H! = ⎢⎢
1 0 1 0 0 0 0 0 ⎥
C4H4 ⎥ = α 1! + β ⎢ ⎥ diagonalization
""""""""""""""""# α 1! + ⎢
0 β α β ⎢ 0 1 0 1 ⎥ ⎢ 0 0 0 0 ⎥
⎢ ⎥
⎢⎣ β 0 β α ⎥⎦ ⎢⎣ 1 0 1 0 ⎥⎦ ⎢⎣ 0 0 0 −2 ⎥⎦
E = α + 2β , α , α , α − 2β