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- Fossilization is rare
- For dead remains to survive into fossil records requires exceptional conditions
Microbial Decay
- Microbes break down dead organic matter further at the molecular level
- Decay often proceeds from the inside out
Chemical Weathering
- Mineralized tissues tend to dissolve and erode at the surface
Promote Preservation
- Absence of oxygen slows down decomposition process and discourages scavenging
- Rapid entombment (animal dies quickly)
- Precipitation of stable minerals calcium carbonate, calcite, silica, calcium phosphate
Modes of Preservation
Petrification/ Permineralization
- Filling of pores with additional minerals
- Iron carbonate
- Gives us an idea how dinosaurs were reconstructed
Silification
- The original organic components of an organism are replaces by silica such as quartz, chalcedony or opal
Pyritization
- Marine environments (brachiopods)
- Preserved with iron and sulfur
Phosphatization
- Hard parts filled with phosphate
Carbonization
- Formation of carbon from organic matter
Refridgeration
- May be preserved by ice
Tar Impregnation
- Taking a material that will preserve hard and soft parts
- Something high in salt and vinegar = bacteria doesn't grow
Phosphatization
- Soft tissue replaced by phosphate
Coprolites:
Fossilized poo
Nanobacteria
- About 1000x smaller than regular bacteria
- Debate lies in whether or not it is too small to contain genetic material
Making Genetic Material Abiotically isn’t Impossible, but it’s Not Easy
Problems
1. RNA, DNA are very complex molecules
2. Need high concentration of building blocks to concentrate and polymerize
3. Replication of RNA is a two step process
- Single strand of RNA present, each of its links attract complimentary link (mirror image) out of prebiotic sources like
making a zipper from one side as template for the other
- Process would have to be repeated using new mirror image to duplicate original side (requires enzymes)
Clay Critter
1. Growing clay crystals compete with each other for resources they grow
2. Crystals break apart, be transported in new area where they continue to grow and fragment again; in effect, the world
is populated with competing clay beings
3. Genetic code in effect, charged mineral surfaces
4. Eventually clay critters begin to absorb and incorporate carbon based molecules to apparatus
5. Synthesis of DNA or RNA to augment and ultimately replace clay based genes
1. That the essential ingredients for life were assembled in an aquatic environment (in dissolved form) and these were
late incorporated into a cell membrane
2. That the cell membrane itself (a permeable membrane) acted to bring the ingredients together and that these were
eventually incorporated inside the membrane
3. That the complex ingredients (including genetic material) were assembled on charged mineral particles, and were
later encapsulated in a cell membrane (perhaps the membrane originating as an organic film that covered the mineral
surface)
Key Points
1. Between 4.5 to 2.5 billion years ago, there was almost no OXYGEN present in either the hydrosphere or the
atmosphere
2. From about 2.5 to 2.0 billion years ago, enough oxygen was dissolved in sweater to precipitate IRON oxides as
sediment (forming magnetite and hematite in banded iron formations)
3. Beginning at about 2 billion years ago, there was enough oxygen in the atmosphere to oxidize (rust) iron on land –
from here onward, banded iron formations decrease in abundance because iron was no longer dissolved in high
quantities of seawater
- Up to around 2 billion years ago, life flourished in the absence of OXYGEN
Eukaryotes
- Complex cells with a membrane bound nucleus, and other structures such as mitochondria and plastids
- Cells of eukaryotes are much larger than prokaryotes
Production
- In eukaryotes, genetic material is contained within the chromosomes, which are paired in the nucleus (humans have
23 pairs)
- Have two ways can reproduce – Mitosis and Meiosis
Mitosis
- Involves the replication of genetic material and splitting to form clones
- Function: The main process involved in maintaining tissue growth and to some extent reproduction
Meiosis:
- Involves splitting of the genetic material that can later be recombined (via sexual reproduction) to restore full genetic
code
- Function: Fundamental process involved in reproduction among eukaryotes (meeting of 2 cells, sperm and egg to
produce an offspring
Origin of Nucleus
- Nucleus was produced by the infolding of the cell membrane and intaking the genetic material within the cell
- Genetic material in chromosome like clump, and then the infolded membrane surrounds the genetic material
But Not all Eukaryotes are Alike… Why do we have plants and animals?
- Answer probably lies in the types of organelles eukaryotes possess
Animals and Plants have mitochondria
- The “power plants” of cells
- Provide the energy a cell needs to move, divide, and produce secretory products
- Food (sugar) is combined with oxygen to produce ATP (adenosine triphosphate) – the primary energy source for the
cell
- Similar to some bacteria in form and function
Endosymbiosis Theory
- It has been suggested that mitochondria and plastids are actually bacteria that decided to reside in large host
prokaryotes
Could Eukaryotes have started out as big prokaryotes without mitochondria?
- Giardia doesn’t have one, so it is likely that ancestral eukaryotes were able to survive without one as well
- Thrives in an anaerobic environment and eats anaerobic bacteria.
- Its ancestor probably had a mitochondrion, but Giardia evolved to live without one
Up to 575 million years ago, eukaryotes remained relatively simple in form (cysts, blobs, and strands) Then the snowball earth
event happened
3. Snowball to Slush
- 10 million years of volcanic activity raises carbon dioxide concentration
- Greenhouse warming effect causes ice at equator to melt
- Open waters in the tropics absorb more solar energy than ice, accelerating the warming of oceans
Adolph Seilacher
- Concept of Vendozoa
- Soft bodies
- “quitted” structure (fluid filled bags)
- Dependent on microbial mats
- Fixed to seafloor, photosynthesizers”
Worms or Bilaterans
- Most complex metazoan body plan
- Trioblastic 3 principal cell layers: ectoderm, mesoderm, endoderm
- Basic bilateral symmetry: fractal geometry breaks down, but tissue differention is incredible
The Coelom
- The ectoderm and endoderm can be viewed as essentially solid continuous layers
- The mesoderm is a little more complicated in that it actually lines a fluid filled body cavity called the coelom
- It is within the coelom that internal organs other than the gut develop
Important Protostomes
Flatworms
- Do not have a coelom and it is likely that something like a flatworm gave rise to more advance coelomate bilaterans
Deuterstomes
- Endchinodermata (spiny skin), Hemichordata, Chordata
Evolution of Fishes
- The origin of fishes can be traced to the first chordates (something like Pikaia or the modern Branchiostoma) that
lacked a backbone but possessed a flexible rod of tissue called a notochord
- Like other chordates, these have the basic worm-like body plan, muscle packs and a pharynx
- Primitive Cephalochordates: Fish like forms without backbone (but with well differentiated head and body
- Earliest fishes were jawless fishes, that evolved into jawed fishes
- Diversity of fish peaked in the Devonian period.
Step 2
- Lose first couple gill arches and modify third in line into solid jaws (upper mandible is upper part of arch becomes
attached to skull, lower mandible remains free)
Step 3
- Modify next gill arch in line into secondary components of the upper and lower mandibles
Placoderms
- Distinguished by jaws and thick plates of bony armour
- Fairly primitive jawed fishes
- Hard outer skeleton
Bony Fishes
- Fins supported by thin bones that radiate out from body
- Fins attached to body by fleshy lobe with complex internal bone structure
- Fins more robust and muscular than in any rayed rish
- Devonian-Recent
Rayfinned Fishes
- Forms one usually thinks of as fishes
- More diverse group of present day fishes
Tooth Structure
- Labyrinthodont tooth structure is shared between Rhipidistian fishes and the earliest amphibians
- Strongly supports the relationship between the two
Skeletal Modifications
- Skeletal structure of Rhipidistians was already similar to that of amphibians (especially in fins)
Tirktaalik
Fish Characteristics
- Gills
- Scales
- Finns
Amphibian Characteristics
- Robust rib bones
- Triangular skull shape
- Neck with separate pectoral girdle (shoulder supports)
- Functional “wrist” joint
- Lungs – properly
“Fishapod”
Late Devonian
- Ichthyostega was an early true tetrapod
- Robust ribcage would have allowed greater lung breathing efficiency
- Stronger pectoral and pelvic girdles allowed the primitive amphibians to cope with the minimal support provided by
air on land
- Special kind of skin that helped them retain bodily fluids and desiccation
Carboniferous to Permian
- Amphibian nostrils became increasingly functional for breathing air
- Amphibians evolved hands and feet with five digits
- Amphibian tails became reduced in size
- Amphibian backbones grew stronger (enabled their bodies to grow bigger)
- Obtained eardrums
Amphibian Diversification
- By the Permian period, amphibians had become quite diverse (some were very large)
Modern Amphibians
1. Anura Frogs and toads
2. Caudata Salamanders and newts
3. Apoda Caecilians
Evolution of Reptiles
Amniote Egg
- Great leap forward for tetrapods
- Certainly not immune to various dangers posed by terrestrial conditions
- Provides a great range of lifestyles that did the eggs of fishes and amphibians
Outer Shell
- An egg shell maintains space for embryo
- The shell protects contents of the egg from outside conditions, but it is permeable to gasses
Amnion
- The amnion is a fluid filled sac in which the embryo floats
- Amniotic fluid mimics the conditions that the embryo would require if the egg lacked a tough shell
Outer Hull/Shell
- The allantois serves two important functions
1. To deliver oxygen to the embryo and to take carbon dioxide away
2. To store excretory products
Food Supply/Yolk
- The yolk serves as the embyro’s principal food supply
Skull Structure
- The basis of amniote classification is the number and arrangement of holes behind the eye socket in the skull
- With respect to these fenestrae, the most important bones are the POST ORBITAL and SQUAMOSAL bones
Anapsid
- The anapsid condition is characterized by the absence of temporal fenestrae
- It is the most primitive skull type among the amniotes
- The anapsid group includes the earliest “stem” reptiles (captorhinomorphs) and perhaps the turtles and tortoises
Synapsid
- Characterized by a single opening below the junction of the post orbital and squamosal bones
- Includes the pelycosaurs (sail baked reptiles), mammal like reptiles (therapsids), true mammals
Diapsids
- Characterized by two openings – one above and one below the junction of the post orbital and squamosal bones
- Represented by all of the archosaurs (ruling reptiles)
- Snakes and lizards, thecodonts
- Crocodilians, pterosaurs (flying reptiles)
- Dinosaurs, birds
Euryapsids
- The euryapsid condition is characterized by single opening above the junction of the post orbital and squamosal
bones
- Represented by extinct marine reptiles: ichthyosaurs and plesiosaurs
To Summarize
Anapsids
- No temporal fenestrae
- Turtles, tortoises
- Captorhinomorphs
Synapsids
- One temporal fenestrae low in skull
- Pelycosaurs
- Mammal like reptiles
- Mammals
Diapsids
- Two temporal fenestrae’s
- Lizards and snakes
- Crocodilians
- Pterosaurs
- Dinosaurs
- Birds
Euryapsids
- One temporal fenestra high in skull
- Icthyosaurs
- Plesiosaurs
Saurischians
Theropods
- Killing machines from upright posture
- Tail is essential for balance
- Meat eaters
Sauropods
- All plant eaters
- Work on all fours
- Defense mechanism = tail
Ornithischian
Orhnitopods
- Arose from sauropods
- Hollow canal from the back of throat up into the nostril area
- Function mating sounds
Stegosaurs
- Plated dinosaurs
- Peaceful plant eaters
- Plates housed blood vessels radiator that gains and subtracts heat
- Digestion maintains heat
Ceratopsian
- Have a frill (shield) in the back
- Function of the frill skull is heavy so it gives the neck muscle attachment and allows the neck muscle attachment
and allows the dinosaur to hold its head back
Ankylosaurs
- Back was covered in plates
- Club of solid bone at the end of the tail
- Had 4 toes on ground
- Only way to kill it was on its back
Pachycephalosaurs
- Small bone headed dinosaur
- Function of head bash together to compete for mates
Ichthyosaurs
- Evolved from land dwelling reptiles with hands and feet
- Modification of body for sea life developed flippers
Plesiosaurs
- Evolved from a land dwelling reptile
- Modification of limbs to form flippers, and lengthening of neck for darting movement to catch prey
Marine Turtles
- Large amount of biomass in the ocean
- Turtles got very big
Mosasaurs
- Great marine lizards
- Lizards that adapted aquatic life
- Komodo dragon is the closest living thing
- Evolved from land lizard, retaining lizard like body but limbs and tail modified for swimming
- Common prey other marine reptiles, birds, large ammonites (squid like molluscs)
- They puncture the ammonites so they are no longer buoyant, then able to pull out the soft tissue
Evolution of Birds
- Study of dinosaurs in china has excited many paletologists who suspected a direct link between dinosaurs and birds
- Close link between dinosaurs dates back to the discovery of the remains of Archaeopteryx in Solnhofen Limestone in
Germany
Archaeopteryx
- Feather found in 1860
- This feather was not only exceptionally preserved but showed the asymmetric form that is a characteristic of flight
feathers
- Specimen found in 1861 called “the London Specimen” was significant because it established that the type of bird
from which the single feather found previously was derived from
Foot Morphology
- Hind foot
Furcula
- In birds, a fircula, had to do with frequent use of arms for flight
Upstoke
- The upstroke in flight is made possible by a pulley system involving muscles and tendons
- The supracoracoideus muscle (the “tender” of a chicken breast) is attached to the sternum
- Contraction of the supracoracoideus pulls on a tendon that loops through the top of the shoulder and is attached to
the upper surface of the humerus (upper arm)
- The arm is raised as the tendon pulls tight
Downstroke
- Downstroke in flight is accomplished by outer chest muscles
- The pectoralis muscle is attached to the underside of the humerus and the keel of the sternum
- Contraction of the pectoralis muscle pulls the arm downwards
- The furcula (wishbone) acts as a spring to restore shoulder (coracoid) bones to the position necessary for the next
upstroke
Hollow Bones
- The bones of a bird are incredibly lightweight, due to the amount of empty space inside, but at the same time are
remarkably strong
- The strength is provided by interior struts (similar to the grid work in a high rise building)
Soot Particles found in boundary clay similar to fly ash from coal burning plants
- Suggest global wildfires associated with ignition of large amounts of dead plant matter on Earths surface
KT Asteroid Impact
- Asteroid and shock wave blast long trench
- Rings of complex crater form
- Impact winter
- Debris injected into atmosphere
- Lots of dead, rotting organic matter
- Global wildfires
- Blocking of sunlight
- Consumption of ozone
Survival of the Fittest
- Does it work during mass extinction?
- In mass extinction, the specialists lose
- Early mammals inferior at the time (when the conditions were stable) but because of their generalized life habits, had
a higher change of surviving ecological disaster than dinosaurs
#5 Cretaceous Teritary
- 47% of marine genera
- Bolide impact
- Flood volcanism
- Cooling, rapid sea level fall
#4 Triassic Jurassic
- 52% of marine genera
- Flood basalt volcanism (central atlantic)
#3 Late Devonian
- 57% of marine genera
- Global cooling (coincidence with expansion of land plants?
#2 Ordovician Silurian
- 60% of marine genera
- Global cooling, then rapid warming
- Rapid sea level fall followed by rapid sea level rise
#1 Permian Triassic
- 95% of all marine species
- Bolide impact
- Food basalt volcanism in Siberia
- Assembly of Pangaea
- Global cooling, major sea level fall
- If we can see what happened in the past, we can wee what might happen in the future
- What can we do and how can we change this situation so that our extinction will be delayed?
Diversification of Mammals
Differences between Reptiles and Mammals
Reptiles Mammals
No Milk Milk
Jaw contains more than one bone Jaw contains only one bone
Pelycosaurs
- Among the earliest of the mammal like reptiles were the pelycosaurs (evolved from anapsids by the Early Permian)
- Retain sprawling posture of primitive Anapsids
- Distinguished by their sail
- Both carnivorous and herbivorous forms
True Mammals
- By a stroke of luck, one group of therapsids gave rise to mammals during the Triassic
- First true mammals appeared on Earth together with the earliest dinosaurs during the Triassic
- A few early groups of mammals lived during Mesozoic but went extinct by early Cenozoic
Earliest Tertiary
- On land, many new types of mammals appear in a dramatic evolutionary radiation filling the ecological roles vacated
by the dinosaurs
- But compared to the majestic Cretaceous megafauna, these animals were small
- Dominant forms were holdovers from the Cretaceous and quickly died out as large scale replacement commenced
- By Eocene, mammals included many giant yet small brained rhinoceros like types
- Rhino like mammals equivalent to large herbivorous dinosaurs?
- There were huge flightless carnivorous birds (phorusrachids) 2 meters tall with curved beaks that mimicked the great
theropod dinosaurs of the Mesozoic
- Birds became dominant before mammals
- Had heads larger than horses
- Around briefly after dinosaurs went extinct
Late Tertiary
- Modern mammals and flowering plants evolved as well as many strange mammals that are no longer evolved
- Shrinkage of inland seas plus plate movement create land bridges
- Climate changed and it became dryer on land
- Grasses became very widespread
- Grasses important in the growth of mammals
Late Tertiary
- The most astonishing thing was the evolution of grass
- This led to the evolution of long legged running animals adapted to life on the savanna and prairie
- The horse family Equiidae was a success story during the late Tertiary
- Horses and other grazing mammals evolved high crowned teeth to cope with a diet of abrasive grass
- Two groups of grass grazers 1. Even toed – camels and rhinos, 2. Odd toed – horses
- Three toes on ground and shortening of side toes and enlarging middle toe – into hooves
- Dawn horse – terrier sized and 4 toes
Late Tertiary
- Initiation of last ice age, climate much cooler
- 18 million years ago
- More extinctions as climates cooled, culminating in ice age
- Episodes of continent scale glaciation in Northern and Southern hemispheres with interludes of warmer interglacial
conditions
- There were still many forest animals however. The mastodons lived on every continent except Australia
Evolution of Primates
How and Where Did Primates Originate?
Arboreal Theory
- Primates became primates by adapting to life in trees
- Enhanced sight (depth perception)
- Grasping feet and hands
Visual Predation Hypothesis
- Binocular vision, grasping hands and feet, and reduced claws developed because they facilitated the capture of insects
- First adapted to life in the bushy forest undergrowth and low tree branches
Oldest Primates
- The earliest primates date to at least the Paleocene (65-54 million years ago) but possible appeared as early as Late
Cretaceous
- The Eocene (54-38 million years ago) was the epoch of prosimians with at least 60 different genera in two families
The Big Split
- Common ancestor splits into Anthropoids (higher primates) and Prosimians (lower primates)
Major Differences between Anthropoids and Prosimians
- Anthropoid eyes are rotates more forward compared to Prosimians
- Anthropoid have a fully enclosed bony eye socket
- Anthropoid = dry nose, Prosimian = Wet nose
- Anthropoid molars more complex than prosimian
Early Anthropoids
Parapithecines
- By the Oligocene (38-23 million years ago) anthropoids dominated over lemurs and relatives
- The beginnings of the anthropoid group are traced to generalized forms such as the parapithecines (aegyptopithecus)
Aegyptopithecus
- Body of aegtptopithecus resembled a lemur, but teeth more anthropoid like
- Thought to be the realitive between New world monkeys and old work monkeys
Primitive Hominoids
- The common ancestor of gibbons, apes and hominoids is believe to have resembled Pierolapithecus which lived
during the Miocene
Misconceptions
1. Our ancestors were apes. Contrary to our beliefs, evolutionists do not claim we evolved directly from apes. More likely
we evolved from a common ancestor. In other words, we are related to apes, but did not necessarily evolve from them
2. Hominoid evolution progressed along a single linear track directly from primitive ancestor to modern form. Most
evolutionists acknowledge assert that hominids evolved several branches (more like a bush than a stick) and that
some of these branches overlapped in time and space
- The last ancestral population held commonly by humans, gorillas, and chimpanzees is known as Hogopans
- The lines of the orangutans, gibbons, and siamangs having split off several million years earlier, the hominid line
almost certainly diverged from those chumps and gorillas late in the Miocene epoch, between 7 and 5 million years
ago
- Hogopans probably split into the three separate lines leading to gorillas, chimpanzees and humans no more than 8
million years ago which each group moving into separate niches: equatorial forest (gorilla), woodland (chimpanzees)
and open grassland (hominids)
Rise of the Hominids
An Interesting Aside
- Among the most unique ancient apes was Gigantopithecus – the largest primate that ever lived (10 feet tall and
weighed 1200 pounds)
- Died out around 400,000 years ago (so coexisted with Homo erectus)
- Some people believe it is still alive today as Yeti and bigfoot
Hominoid Evolution
- First human like ancestor appeared 4 million years ago
- Australopithecines
- Pevlis becomes shorter, and flatter, pelvic canal expands
Legs longer and arms shorter
- Digits shorter and straighter
- Foramen magnum (attachment area at base of skull) becomes directed downward
Bipedal Locomotion
- Footprints of Australopithecus in volcanic ash
- Male and female… with child?
- Form and shape of footprints mean that there is more weight on one side of the body meaning they could have been
carrying something such as a child
Australopithecines
- Difference between Australopithecus Africanus and robust – has lower mandible and molrs
- Large molars = large surface areas for grinding
Australopithecus to Homo:
- Body size increases
- Change from largely herbivorous to omnivorous diet
- Bony facial ridges progressively reduced
- Upper and lower jaws protrude less
- Tooth size reduced
- Tooth morphology changes: sharper molars
- Cranial capacity increases
- Habitat changes from woodland to savanna
- Tool use
- Discovery and increased use of fire
- Development of language Development of prolonged parental care
- Overall increase in brain size
Early Technology
- Simple tools with chopping/cutting edge tools with more refined bifaced edge
Later Technology
- Tools with maximized cutting surface Sophisticated spear points. Cave drawings appear by 30,000 years
- Best material to use: sedimentary rocks made out of quartz
Replacement Model
- This model envisages modern humans evolving from archaic homo sapiens 200,000 -100,000 years ago only in Africa
- It is thought that modern Homo sapiens migrated from Africa into the rest of the Old world replacing all of the
Neandterals and other late archaic homo sapiens
- If this is correct, then all modern people share a relatively modern African ancestry
- According to this model, the regional anatomical (racial) differences that we see among humans today are recent
developments evolving only in the last 50,000 – 40,000 years
- If so, all other lines of humans that has descended from homo erectus presumably went extinct
Supervolano
- Every 50,000 years or so, a volcanic eruption capable of injecting enough ash and sulphur dioxide into the atmosphere
to cause a dramatic effect on global climate for a few years
- 74,000 years ago, Toba (in Indonesia), erupted enough ash and cooling gasses into the Earths atmosphere. Freezing
conditions existed in the tropics for about 5-6 years. Humans teetered at the edge of extinction, and barely made it
through
Plate Tectonics
- In the future, continents will all drift together
- Whoever survives the next mass extinction will lead the next revolution in Earth’ s biological history
-