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Annual GST Reconciliation and its Importance 01
Consequences of Not Doing an Annual GST Reconciliation . .. .. .. .. - - . - - 03
Sources and Reports to Perform Annual GST Reconciliation
Steps for Annual GST Reconciliation 05
• ITC reconciliation 05
• Sales reconciliation ...............................-.-.-....-.-.-.-.-......-.-.. 07
Challenges Faced in Annual GST Reconciliation 09
How to Simplify Annual GST Reconciliation 22-25 11
Annual GST reconciliations also involve harmonising financial reporting data while ensuring an accurate and complete
closure of GST reporting for the financial year. The yearly GST reconciliation is similar to the monthly/frequent
reconciliations but with
additional checkpoints.
Accordingly, it requires matching the yearly sales and purchase datasets as filed in the GSTR-1, GSTR-GB, or appearing in
GSTR-2A, GSTR-2B, and the books of accounts.
Similar to the regular periodic reconciliations, the annual reconciliation also involves reconciliations of the General Ledgers
(GL), e-invoices, and e-way bills with the respective GST returns and sales/purchase registers. Additionally, for annual ITC
reconciliation, the GSTR-2A is preferred over the GSTR-2B. It involves the adjustment of advances during the financial year
and the reversal of ineligible input tax credit (ITC)
previously claimed.
Annual reconciliation needs data consolidation for the entire fnancial year 2022-25, including those invoices or documents
belonging toa financial year that have been reported or corrected in the following financial year up to 50th November
2025 or the
date of filing the annual return (GSTR—9), whichever is earlier.
After the annual reconciliation is done, most big enterprises must file GSTR—9 and GSTR-9C on or before the 51st of
December 2023 for 22-25. Hence, for an enterprise other thana small business, any actions based on the annual
reconciliations for 22—23 must be taken in GSTR-1 and GSTR-3B returns of October 2025, due on 11th November
2023 and 20th November 2023.
Clear - Enterprise’s Checklist for Novigoting Annuol GST Reconciliotions for FY 22-23 01
The taxpayer must take suitable action for any mismatches and missing entries that may call for effective vendor
communication, reporting and amendment steps in GST returns. It ensures timely ITC claims and payment of tax dues for
the relevant financial year, avoiding any adverse impact on the working capital and, in turn, the profitability
of the taxpayer’s business.
You‘ll need the following ready-to-use reports, available on Clear, to make annual
GST reconciliation hassle—free and quicker!
• Multi-month GSTR-2A report: Displays GSTR—2A data across different tax periods in a single place. Use this report
for any misses due to timing differences in invoice
reporting.
° Multi-month GSTR-2B report: Even though the GSTR-2A data is mostly relevant for
annual GST reconciliation, this report, similar to the multi—month GSTR—2A, still remains relevant as taxpayers would
have referred to it for their regular filings.
• e-Way bill (GSTR-1) vs Soles Register report: Allows taxpayers to identify missing
e-way bills data in either of the records, revalidate and file accurate GSTR-1.
• e-Invoice (GSTR-1) vs Soles Register report: Allows taxpayers to identify missing e-
invoices data, revalidate and file accurate GSTR—1.
• PAN-IeveI summory reports of the obove will assist in filing the annual income tax
retUrn and taX aUdit repOrt.
Step 1: File GST returns in GSTR-1 and GSTR-3B to dote, especially for 22-23
The taxpayers must mandatorily file all the periodic GST returns for the financial year 2022-23. Businesses should have
ideally fled their returns for March 2025 in April 2025 by carrying out one round of yearly reconciliations for any
adjustments, ITC reversals, etc. If any GST returns are yet to be filed within the due date, these should be filed along with
interest or late fees as applicable. The matching and reconciliation process cannot be
conducted until all pending GST returns for 22-25 are filed.
don‘t miss the following checkpoints for the annual ITC reconciliation:
• Claim ITC belonging toa relevant financial year if not claimed earlier (Appearing in
the GSTR-2A/2B for the relevant periods but not in the GSTR-GB filed returns).
• Do vendor—wise reconciliations to identify and communicate with vendors where any
ITC claimed in earlier returns, now need to be reversed due to underreporting by the vendor for FY 22—23.
• Ensure to check GSTR-2A, the dynamic returns, to date for yearly reconciliation to not
miss out on the TDS and TCS credits.
• Reverse any ITC, being ineligible, whether temporary or permanent in nature and ensure reporting of reclaims
belonging to that financial year if missed earlier. Refer to CGST Rules 57, A2, 45, etc. Report the opening balance for the
electronic credit reversal and reclaim statement for ITC reversed from April 2022 to date but not
reclaimed.
• Ensure any adjustments to ITC reported via debit notes or credit notes issued by
vendors in FY 22-25 against purchase invoices are reported for the financial year.
• Check if the corresponding taxes are deposited by the vendors with the government.
• File amendments pertaining to rectified information reported in the GST returns filed
ina financial year.
• Check the purchase register for 22-23 and various expense ledgers, such as bank
charges, stock insurance premium accounts, etc, to look for any omissions in the GSTR-GB or adjustments.
• Check taxes payable versus those paid under the Reverse Charge Mechanism (RCM)
and pending ITC claims for the financial year towards goods/services used for business.
• Compare the annual Income Tax Return (ITR) with the Annual GST Return (GSTR-9).
• Keep the purchases and input tax general ledger at par with the purchase register, except for certain exceptional line
items, such as intra-company stock transfers and
cross charges.
Soles reconciliotion
Before fling the annual return, a reconciliation of outward supplies or sales will ensure that the tax liability is accurately
reported without omissions for 22—23. Such sales data must match the details reported in the GSTR-1 and GSTR-GB filed
between April 2022 and October 2023. Further, developments such as DRC—01B and automated return
scrutiny have necessitated the need for frequent sales and tax liability reconciliations.
Details of taxes paid during the year need to be mentioned, and this must tally with the
total taxes disclosed and paid in the GSTR—GB. Don’t miss the following checkpoints for the annual sales and tax liability
reconciliation:
• Find out if any supplies were reported under the wrong tables in the GSTR-GB while
compared to the GSTR—1.
• Identify if any inter—state supplies made to unregistered persons were omitted in the
GSTR-GB.
• Identify the value of supplies correctly shown but tax paid under the wrong head.
• Match table of exports at 6A of the GSTR—1 vis ó vis corresponding declaracion in the
GSTR-KB.
• latch table of exports at 6A of the GSTR-1 vis ó vis details of shipping bills submitted
on ICEGATE.
• Identify if e-invoices have been generated accurately for all applicable sales and
whether all e—invoices have been reported in GSTR—1.v
• Keep the revenue and output tax general ledger at par with the sales register, except
for certain exceptional line items such as intra-PAN transactions.
Step 3: Communication with the vendors and customers is the next crucial step
After identifying the mismatches, the immediate next step is to follow up with your vendors and customers to rectify them.
Coordinating with vendors and customers via regular communication regularly reduces your burden during annual
reconciliation.
However, manually doing this task would be a huge and time—consuming task.
Further, errors or duplications can arise if one missed reporting as per the modified format of Table-4 in the GSTR-GB of
any tax period. The recent update to report the opening balance of ITC reversed but not reclaimed by 30th November 2023
on the GST portal puts additional pressure on the teams for maintaining an accurate electronic
credit reversal and reclaim statement.
Lack of technology makes annual GST reconciliation, especially with high data volumes, time—consuming and strainful.
An automated solution makes it easier and error—free for enterprises to ensure compliance.
Look for the following features while choosing a suitable GST reconciliation solution for
your enterprise, Your ideal solution for annual GST reconciliation must: