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Biophysical Chemistry 83 Ž1999.

211᎐221

A proposal for the structuring of water

M.F. ChaplinU
School of Applied Science, South Bank Uni¨ ersity, Borough Road, London SE1 0AA, UK

Received 22 September 1998; received in revised form 26 October 1999; accepted 11 November 1999

Abstract

In spite of much work, many of the properties of water remain puzzling. A fluctuating network of water molecules,
with localised icosahedral symmetry, is proposed to exist derived from clusters containing, if complete, 280 fully
hydrogen-bonded molecules. These are formed by the regular arrangement of identical units of 14 water molecules
that can tessellate locally, by changing centres, in three-dimensions and interconvert between lower and higher
density forms. The structure allows explanation of many of the anomalous properties of water including its
temperature᎐density and pressure᎐viscosity behaviour, the radial distribution pattern, the presence of both pen-
tamers and hexamers, the change in properties and ‘two-state’ model on supercooling and the solvation properties of
ions, hydrophobic molecules, carbohydrates and macromolecules. The model described here offers a structure on to
which large molecules can be mapped in order to offer insights into their interactions. 䊚 1999 Elsevier Science B.V.
All rights reserved.

Keywords: Water structure; Low-density water; Water clusters; Amorphous water; Icosahedral network

1. Introduction fined. Notwithstanding this, it remains an


anomalous liquid where no single model is able to
Water is the most abundant substance on earth explain all of its properties w1x. In particular,
and has been very well studied with a number of successful models must encompass the radial dis-
model structures having been proposed and re- tribution function, the pressure᎐viscosity and
temperature᎐density behaviour and the effects of
solutes. Much work has been invested in develop-
U
Tel.: q44-171-815-7970; fax: q44-171-815-7999. ing models for individual water molecules for use
E-mail address: chaplimf@sbu.ac.uk ŽM.F. Chaplin. in molecular dynamics simulations w2,3x. These

0301-4622r99r$ - see front matter 䊚 1999 Elsevier Science B.V. All rights reserved.
PII: S 0 3 0 1 - 4 6 2 2 Ž 9 9 . 0 0 1 4 2 - 8
212 M.F. Chaplin r Biophysical Chemistry 83 (1999) 211᎐221

models are very useful, particularly for investigat- for LDA w19x and supercooled water w20x. How-
ing short-range order, but have difficulty address- ever, the entropy of LDA is much lower than can
ing the totality of the unusual nature of water be explained by this model w21x. Several workers
including the long-range ordering that has been suggest that the structure of liquid water should
described around macromolecules w4᎐6x. In par- be related to ice structures w6,22x, although this
ticular, they only show approximate agreement structure must be significantly different due to
with the radial distribution functions and have the ease with which water supercools and its high
difficulty explaining the position and size of the heat of fusion. Recently, a two-state network
3.5-A˚ peak w3,7x. A number of interstitial models model including ice 1h and ice II substructures,
have been described based on dodecahedra w8x or locally rearranging on a picosecond timescale, has
the ice 1h structure w9,10x. These involve the been used to explain many of the properties of
presence of water molecules within cavities in the water w23x. Although attractive, this model leaves
hydrogen-bonded network. A percolation model, some questions unanswered, such as the pressure
where the degree of hydrogen bonding decreases requirement for the extensive ice II cluster for-
as temperature increases, has also been devel- mation necessary to achieve the density of water
oped w11x. Although good at explaining some, but and the required number of non-bonded close
not all, of the properties of water, its nature is contacts. Other workers have used less explicit
still unclear. More recently, explanations of the
two-state models possessing high and low density
properties of water have been in terms of non-
components to explain the properties of super-
bonded interactions in a fully bonded network
cooled water w24x and the pressure-dependent
w12x, significant bending in the hydrogen bonds
growth of the 3.5-A ˚ peak in the radial distribution
w13x, competition between bonded and non-
function w25x.
bonded interactions w14x or equilibrium between
Water dodecahedra have been found in aque-
structural components containing hexagonal, pen-
ous solutions w26,27x, and in the gas phase w28x.
tagonal and dodecahedral water arrays w15x. A
Dodecahedral water clusters have also been re-
review outlining the relationship between liquid,
supercooled and low-density amorphous ice ported at hydrophobic and protein surfaces, where
ŽLDA. has appeared recently w16x. low-density water with stronger hydrogen bonds
Whilst the molecular movements within liquid and lower entropy has been found w29x. Similar
water require the constant breaking and reorgani- cavities have been found in LDA w30x and shown
sation of individual hydrogen bonds on a picosec- to be formed relatively easily in water during
ond timescale, it is thought that the instantaneous molecular simulations w31x.
degree of hydrogen bonding is very high Ž) 95%, In this paper a structural model for water is
w13x. and gives rise to extensive networks, aided proposed that both builds on, and is consistent
by bonding cooperativity. It has been suggested with, these different approaches. The basis of this
that there will be a temperature-dependent com- model is a network that can convert between
petition between the ordering effects of hydrogen lower and higher density forms without breaking
bonding and the disordering kinetic effects w17x. hydrogen bonds. It contains a mixture of hexamer
There are many pieces of evidence indicating that and pentamer substructures and contains cavities
the time-averaged hydrogen-bonded network pos- capable of enclosing small solutes. The model was
sesses a large extent of order. These include the developed by arranging alternating sheets of
fine structure in the diffraction data w9x, mi- boat-form and chair-form water hexamers from
crowave dielectric relaxation measurements on the lattices of hexagonal and cubic ice, respec-
glucose solutions w6x, vibrational spectra that have tively. This structure was folded to form an icosa-
indicated the presence of large clusters w18x and hedral three-dimensional network with capacious
the formation and properties of low density water pores capable of partial collapse due to competi-
in gels w4x. tion between bonded and non-bonded interac-
A random network model has been described tions.
M.F. Chaplin r Biophysical Chemistry 83 (1999) 211᎐221 213

2. Methods 3. Results and discussion

Molecular model building and dynamics were The network is based on the regular arrange-
performed using the Hyperchem 5.11 ŽHypercube ment of 14-molecule units ŽFig. 1.. Twenty of
Inc., Ontario, Canada. molecular modelling pack- these slightly flattened tetrahedral units, together
age. In order to obtain the co-ordinates, the net- containing 280 molecules of water, form a 3-nm
work was optimised using the AMBER force field diameter icosahedral structure ŽFig. 2a.; small
with special parameters ŽO ⭈⭈⭈ O stretch 28 kJ differences in geometry throughout being taken
moly1 A ˚ y1 , O ⭈⭈⭈ O distance 2.84 A;
˚ O ⭈⭈⭈ O ⭈⭈⭈ O up by bonding flexibility. This is managed by each
bend Ž k ␪ . varying close to 4 kJ moly1 rady2 , from of the four tetrahedral chair-form hexameric faces
109.47⬚; van der Waals r U s 3.536 A, ˚ ␧ s 0.636 kJ forming three hydrogen bonds to neighbouring
moly1 , hydrogen atoms were not treated explic- units, so creating structural units identical to the
itly, being placed such that each oxygen has two cell of hexagonal ice ŽFig. 3a.. Each tetrahedral
near and two far hydrogen neighbours after model edge forms a fifth part of two 15-membered pen-
building was completed.. These parameters were tagonal boxes made up from five boat-form hex-
chosen as reasonable to create the model but amers ŽFig. 3b.. In forming these links, eight-
were not critical. All data reported are derived membered structures are formed on each edge
from structures with average O ⭈⭈⭈ O and O᎐H near the vertices ŽFig. 3c.. At its vertices each
nearest neighbour distances of 2.82 A ˚ and 0.96 A,˚ tetrahedron donates one molecule to the forma-
respectively. tion of a dodecahedron ŽFig. 3d.. Although such a

Fig. 1. The arrangement of 14 water molecules within a slightly flattened tetrahedral unit; three edges are 5% shorter than the
other three. The three different environments for the water molecules are labelled a᎐c. The water molecules labelled Ža. form the
corners of the tetrahedron and are involved in both boat-form hexamers and pentamers. The remaining 10 molecules form an
adamantane-type ring structure, identical to a 10-molecule unit recently found in a crystalline supramolecular complex w32x, and as
found within the 18-molecule cubic ice cell. The four molecules labelled Žb. are involved in both boat and chair-form hexamers and
the remaining six Žc. molecules in pentamers and boat and chair-form hexamers.
214 M.F. Chaplin r Biophysical Chemistry 83 (1999) 211᎐221

Fig. 2. Ža. ES: 280-Molecule expanded icosahedral water cluster, as viewed down a water᎐pentamer lined axis through four
pentagonal boxes and the central dodecahedron, shown separately in Žb.. Only the network of oxygen atoms is shown for clarity. Žc.
CS: The ES structure collapsed into the puckered central dodecahedron, shown separately in Žd.. The puckering, considered here, is
˚ from the centre and eight inner ones Žarranged at the vertices of a 3.14-A
symmetrical with 12 outer positions at 4.15 A ˚ cube and
˚ from the centre.
indicated by dots. at 2.71 A

cluster is capable of tessellation in three dimen- Each 280-molecule icosahedron contains a vari-
sions, albeit increasingly strained with increased ety of substructures with each water molecule
size, it is incapable of forming a crystalline struc- being involved in four hydrogen bonds; two as
ture due to its fivefold symmetry. donor and two as acceptor. Pentamers of water
M.F. Chaplin r Biophysical Chemistry 83 (1999) 211᎐221 215

Fig. 3. Structural units formed within ES. Water molecule positions are labelled from the environments indicated in Fig. 1; Ža.
hexameric box formed by the faces of the tetrahedra; Žb. pentagonal box formed by the edges using similar molecules from five
tetrahedron edges, meeting at two pentagonal faces. Each tetrahedron unit has a fifth share in each pair of such units that form on
each of its six edges; Žc. eight-membered structure, arranged similar to the carbon atoms in bicyclo w2,2,2xoctane and each
containing three boat-form hexamers; Žd. dodecahedron formed by the vertices of the tetrahedra Žall molecules are type a..

have bond angles of 108⬚, which are 1.47⬚ closer molecules with relatively disordered boundaries
to the supposedly most stable H᎐O᎐H angle as at room temperature. Such network structures
evident in water vapour Ž104.52⬚. than are the represent the time-averaged positions and are
tetrahedral angles Ž109.47⬚. in ice, which may likely to be incomplete at higher temperatures.
strengthen the hydrogen bonding that forms the Full, if strained or imperfect, tessellation may be
spines of the cluster. The clusters can tessellate in possible, as the TIP4P water model has been
three-dimensions as each cluster has 12 potential shown to form infinite four-coordinated hydro-
sites at its icosahedral vertices for use as centres gen-bonded networks in low density supercooled
of neighbouring overlapping clusters. As the net- water w33x.
work grows the structure becomes more distorted. The stability of the network is finely balanced,
It is likely that this tessellation is achieved by the being able to fluctuate between an expanded low
clusters flickering between different central do- density structure ŽES, Fig. 2a. and a more dense
decahedra; a theory in line with that of Luck w18x, collapsed one ŽCS, Fig. 2c. without breaking any
who used vibration data to suggest clusters of 240 hydrogen bonds and consequent on small changes
216 M.F. Chaplin r Biophysical Chemistry 83 (1999) 211᎐221

in the hydrogen-bond strength relative to the the X-ray data indicating the relative movements
non-bonded interactions. Using a k ␪ of 3.68 kJ expected of a liquid. There are 16 peaks or troughs
moly1 rady2 in the model, the central dodecahe- plus a further 34 inflections evident using the first
dron is fully expanded, and the standard deviation derivative. All 50 positions show correspondence
of the angles about the tetrahedral angle is 1.3⬚. between the X-ray data and the calculated func-
Reducing the k ␪ by 1% to 3.64 kJ moly1 rady2 tion for CS, except that between approximately
Žhere used as a mechanism to mimic a slight 7.9 A˚ and 8.5 A˚ where only corresponding inflec-
reduction in the relative strength of the hydrogen tions are found for CS. However, if all 50 data are
bonding. causes the central dodecahedron to considered, the standard deviation of the differ-
pucker inwards and increases this standard devia- ences is only 0.065 A. ˚ There is also good corre-
tion to 13.6⬚ about a mean of 108⬚. The expanded spondence with the O ⭈⭈⭈ O radial distribution
structure ŽES, Fig. 2a. with central convex dodec- functions derived from the neutron diffraction
ahedra ŽFig. 2b. is formed when stronger hydro- data ŽFig. 5., although this shows less fine struc-
gen bonds are present. This may occur because of tures. The O ⭈⭈⭈ O radial distribution function us-
the presence of structuring solutes or surface ing the SPCrE, PCC and TIP4P models for water
interactions. If the hydrogen bonds are weaker w3x do not show the fine structure evident from
such that non-bonded interactions are more im- the diffraction data but do show agreement with
portant then the cluster forms the partially col- the structure of CS by giving second neighbour
lapsed structure ŽCS, Fig. 2c. due to the forma- broad peaks at approximately 4.6 A. ˚
tion of puckered dodecahedra ŽFig. 2d.. As there The 2.8-A˚ peak from CS shows the presence of
are five equivalent ways that the central dodeca- 4.34 nearest neighbours where 0.34 of these are
hedron can pucker, the actual CS structure will contributed by the shoulder evident at approxi-
be a fluctuating mixture of interconverting puck- mately 3.2 A.˚ This compares well with the re-
ered forms with similar radial distribution func- ported 4.4 nearest neighbours as calculated from
tions. The density of ES is 0.94 g cmy3 and that the diffraction data w8x, which also includes the
of CS, 1.00 g cmy3 . The former may be compared shoulder at 3.2 A. ˚ The size of the 3.7-A ˚ peak
with the density of low density water found around compared to the 2.8-A ˚ peak Ž0.69:4. from CS is
macromolecules w4x at 0.96 g cmy3 , supercooled close to that required from the radial distribution
water Žy45⬚C. at 0.94 g cmy3 and the density of function ŽFig. 4.. It is also possible that very
low density amorphous ice ŽLDA. at 0.94 g cmy3 weakly hydrogen-bonded molecules may occupy a
w30,34x, whilst the latter compares with the density small number of the interstitial sites. If only 1%
of water at 0⬚C of 1.00 g cmy3 . With appropriate of the water molecules occupied such sites, which
parameters mimicking weaker hydrogen bonding is well within the 5% limit w13x possible, this peak
or greater pressure, CS is capable of further would increase by approximately 50% due to mul-
collapse increasing this density. Collapse of all tiple interactions. The presence of pentagons in-
dodecahedral structures gives a density of 1.18 g creases the number of second-neighbour dis-
cmy3 similar to that of high density amorphous tances, at between 4 and 5 A, ˚ to first-neighbour
ice Ž1.17 g cmy3 , w34x.. distances in the ratio of 13.4:4 in contrast to the
Although this model can explain the anomalous 12:4 ratio in ice 1h or ice 1c based structures and
properties of water, so can other models. The the substantially lower ratio in two-state struc-
strongest direct evidence for the model is the tures containing ice II w22x.
agreement with the radial distribution functions. The radial distribution functions of O ⭈⭈⭈ H and
The CS model was used to generate a radial H ⭈⭈⭈ H distances can be calculated from the model
distribution of the O ⭈⭈⭈ O distances. Fig. 4 com- ŽFig. 5.. This is less useful for testing the model,
pares this radial distribution function with that however, due to the lack of detail in the neutron
from the X-ray data at 4⬚C w9x, which shows a scattering data, its variability between laborato-
great deal of fine structure. Although the peaks ries, the higher temperatures used Ž25⬚C., the
are in the same positions, they are less distinct in presence of D 2 O and the necessary, but possibly
M.F. Chaplin r Biophysical Chemistry 83 (1999) 211᎐221 217

Fig. 4. Comparison of the calculated O ⭈⭈⭈ O radial distribution function of CS Ž ———. with the X-ray diffraction data of water w9x
at 4 ⬚C Žᎏᎏᎏ.. The model peaks have been broadened using a normal distribution with a standard deviation of 0.1 A. ˚ The radial
distribution of oxygen atoms, as determined by neutron scattering, is also shown w35x Ž- - - -.. The validity of this neutron diffraction
data has recently been confirmed w36x. The first derivative of the data is shown in the top right; that from the diffraction data has
been scaled =5.

misleading, assumptions that must be made when or solutes may reside. The radius of this dodeca-
calculating from the model that the hydrogen hedron is 3.94 A, ˚ agreeing with the minimum
bonds are linear and all hydrogen-bonding ar- cage radius found w39x, at 3.9 A.˚
rangements are equally probable. However, the There are many examples of the formation of
˚ 3.9 A
model gives H ⭈⭈⭈ H peaks at 2.35 A, ˚ and 4.6 dodecahedral clathrates in aqueous solutions
˚ with a small peak at 2.9 A
A ˚ and O ⭈⭈⭈ H peaks at w26,27x. Such cavity formation is easy in water,
1.85 A˚ and 3.3 A
˚ with smaller peaks at 4.55 A ˚ and increasing the strength of hydrogen bonding in
5.25 A˚ similar to published data w17,35,37x. their neighbourhood w31x. The Hofmeister series,
Support for the structure of ES comes from its whereby ions affect the stability of proteins in
agreement with radial distribution functions of solution by either creating or destroying the
solutions, supercooled water and LDA. The cav- structure of water, may be explained in part by
ity᎐cavity distribution function of supercooled how well the ions may sit passively in the dodeca-
water peaks at 5.5 A ˚ w38x and the neon᎐neon hedra, stabilising ES, relative to how strongly they
distribution function in water peaks at 6 A ˚ w38x. create their own environment w40x. Cations that
Both values are close to the cavity᎐cavity dis- stabilise proteins in solution also create low-den-
tribution function peak of ES at 5.4 A.˚ The radial sity water w29x. The tetramethylammonium ion is
distribution function of ES around its centre con- most effective w29x and its effect on the structure
sists of a number of spherical shells surrounding a of water has been investigated. In ES, expansion
dodecahedral cavity, where structure-forming ions of the inner cavity to a radius of 4.60 A,˚ due to
218 M.F. Chaplin r Biophysical Chemistry 83 (1999) 211᎐221

Fig. 5. Comparison of the calculated O ⭈⭈⭈ H and H ⭈⭈⭈ H radial distribution functions of CS Ž ———. with the neutron diffraction
data of water; Ž- - - - -. w35x, Ž⭈⭈⭈⭈⭈⭈⭈ . w17x, Ž ᎏᎏᎏ. w37x.

charge or steric effects, causes the next two shells distance was 5.3 A ˚ w39x. Both agree with the
in ES to expand to 7.23 A ˚ Žsmaller peak. and 8.13 chloride ion sitting asymmetrically in the nearest
˚
A Žlarger peak.. These three peaks may be re- pentagonal box to a TMA ion situated within a
lated to those found at 4.6 A,˚ 7.2 A
˚ Žsmaller peak. dodecahedron, as this gives a co-ordination num-
˚
and 8.2 A Žlarger peak. around the tetrameth- ber of 5 to a dodecahedral face and a TMAq
ylammonium ion of 0.5 M TMAqCly in D 2 O ⭈⭈⭈ Cly distance of 5.34 A, ˚ given a H 2 O ⭈⭈⭈ Cly
w39x, as the 4.6-A ˚ radius for the dodecahedral distance of 3.24 A. This study w39x also showed
˚
cavity is only slightly larger than half the sum of little effect of the salt on the structure of water
the TMA ion Ž5.8 A ˚ . w39x and water molecule despite the presence of water dodecahedra, which
Ž2.85 A˚ . diameters. The ES structure provides strengthens the argument that such dodecahedral
approximately 1.4 dodecahedral sites per molecule structures are present in pure water. At high salt
for a 0.5 M solution. When higher concentrations concentrations where more than one dodecahe-
of TMAqCly were used, demanding more dodec- dral site is required per 70 water molecules, fur-
ahedral sites than can be provided by ES, the ther sites may arise from tessellated, if distorted,
neutron diffraction peak detail was lost. In solu- dodecahedra Žfive water molecules per dodecahe-
tions of TMAqCly, the chloride had a co-ordina- dron site. or a tessellated structure formed from
tion number to water of 5 and the TMAq ⭈⭈⭈ Cly dodecahedra separated by single pentagonal boxes
M.F. Chaplin r Biophysical Chemistry 83 (1999) 211᎐221 219

Ž25 water molecules per dodecahedron site.. Mi- posed as being part of the normal structure of
crowave dielectric relaxation measurements have water, albeit in a mainly puckered state at am-
indicated a critical behaviour of water at a mole bient temperatures. Shear viscosity and self-dif-
fraction Ž x w . of 0.83 w6x. Although this can be fusion studies have demonstrated the existence of
explained by tessellated water dodecahedra which high concentrations of clathrate-like structures in
have the required number of interstitial sites per supercooled water w47x. In particular, water was
water molecule Ž x w s 0.83., it is also close to the shown to diffuse through many hydrogen-bonded
number of large interstitial sites available in the water pentagons, such as occur through the spines
icosahedral water cluster ES Ž x w s 0.84.. of ES Žsee Fig. 2a., where all water molecules line
The radial distribution functions of ES show pathways of large cavities Žsee Fig. 3b., separated
similarities to those of LDA. Both include fea- by pentagons.
tures similar to cubic and hexagonal ices w41x. Vibrational spectra have shown the presence of
Neutron diffraction data have been used to sug- both large clusters Ž n approx. 240. w18x and water
gest the presence of pentamers, boat and chair pentamers w48x in agreement with CS. Puckering
hexamers and partial dodecahedra w42x. LDA gives of the pentamers was found to increase with
an O ⭈⭈⭈ O radial distribution function with peaks temperature w48x. There are a number of facts
at 2.79, 4.56, 6.95 and 8.60 A˚ from X-ray data w43x that support the presence of some very bent
whereas the ES gives peaks at 2.80, 4.57, 5.38, weaker hydrogen bonds in the structure of water.
7.06, 7.93, 8.88 and 9.16 A ˚ which reduce to just These include the high ice-water energy of fusion,
˚ on Gaussian
four peaks at 2.8, 4.6, 6.7 and 9.0 A, which has been suggested as due to the distortio-
broadening, showing close agreement. The neu- nal weakening of a proportion of the hydrogen
tron diffraction data w20x gives peaks at 1.8, 2.3, bonds, and the vibrational Raman spectra w35x
3.3 Žshoulder., 3.8, 4.6, 5.2 Žshoulder., 7.7, 8.4 and that indicates a range of weaker hydrogen bonds.
9.1 A˚ and troughs at 2.7 and 6.4. A. ˚ This com- It has been proposed that the observed heat of
pares favourably with the calculated distribution fusion Ž6.0 kJ moly1 . is due solely to an increase
function from ES, which gives peaks at 1.8, 2.3, in bond bending going from ice to water w49x. The
3.2, 3.8, 4.6, 5.3, 7.3, 8.0 and 9.2 A ˚ and major average root mean square distortion occurring in
troughs at 2.8 and 6.8 A. ˚ This material is the CS is 13.7⬚, which gives a value very close Ž5.2 kJ
same density w34x as ES and may bear some moly1 ., and also agrees with the 16⬚ distortion
relationship to it, particularly as clusters with estimated from the 600-cmy1 libration band w47x.
icosahedral symmetry cannot form crystals and The minimum number of possible arrange-
therefore must form amorphous solids. The sharp ments of hydrogen bonds in the fully occupied
transition between the puckered and non-puck- low density icosahedral network ŽES. is 2 130 = 7 12
ered water clusters seen in the molecular me- Žs 1.50 280 . as determined during the molecular
chanics optimisations may be the cause of phase building. This is in agreement with the minimum
transitions found by some in supercooled water entropic factor expected of 1.5 structural varia-
w44,45x. An ordered arrangement of cavities has tions per molecule w8x.
been proposed from the diffraction data of LDA The anomalous temperature-density behaviour
w30x, also in agreement with the ES model. It has of water can be explained as previously w13,14x
been reported that the entropy of LDA is only a utilising the range of environments within whole
sixth of that than can be explained from a ran- or partially formed clusters with differing degrees
dom network model w21x but in good agreement of dodecahedral puckering. The density maximum
with the much more ordered ES ŽFig. 3a.. A is brought about by the opposing effects of in-
Raman spectral study of LDA showed the pres- creasing temperature, causing both structural col-
ence of at least two, or possibly three, distinct lapse that increases density and thermal expan-
species w46x in line with three in the ES model sion that lowers density. At lower temperatures
Žsee Fig. 1.. there is a higher concentration of ES whereas at
In this paper, clathrate-like structures are pro- higher temperatures there is more CS, but it
220 M.F. Chaplin r Biophysical Chemistry 83 (1999) 211᎐221

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