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DOI: 10.1002/aoc.5884
REVIEW
1
Chemistry Department, Payame Noor
University, Tehran, 19395-4697, Iran This article aims to provide a survey of biological applications of Schiff base
2
University of Coimbra, CQC, Department macrocycles and their metal complexes, with emphasis given to the synthesis
of Chemistry, Coimbra, P-3004-535, of the compounds and to their uses as antibacterial and antifungal agents. The
Portugal
3
literature on the subject, published during the 2005–2019 period, is shortly
Internal Medicine Department, Shahid
Beheshti University of Medical Sciences, reviewed. This is an informed report collecting information on the addressed
Tehran, Iran topic in a concise systematic way, and can be expected to be useful as a fast lit-
erature catalogue for researchers working on this and related domains.
Correspondence
Reza Golbedaghi, Chemistry Department,
KEYWORDS
Payame Noor University, 19395-4697,
Tehran, Iran. bioinorganic activities, biological applications, literature survey (2005–2019), macrocyclic, metal
Email: golbedaghi82@gmail.com complexes, Schiff base ligands
1 | INTRODUCTION linear di- and polyamines are found in all forms of life,
including the human body, and they are involved in
1.1 | Polyamines key biological processes in animals and plants.[1–6] The
most abundant members of this type of compounds in
Di- and polyamines are relatively simple organic sub- living systems include the diamine putrescine (1,4-
stances that have two or more than two amino groups, diaminobutane), the triamine spermidine (N-(3-
respectively, in their structure. Low molecular weight aminopropyl)-1,4-butanediamine), and the tetraamine
Abbreviations: A. flavus =, Aspergillus flavus; A. fumigatus =, Aspergillus fumigatus; A. niger =, Aspergillus niger; A. oryzae =, Aspergillus oryzae;
A. porri =, Alternaria porri; Aspergillus sp =, Aspergillus species; B. anthracis =, Bacillus anthracis; B. cereus =, Bacillus cereus; B. megaterium =,
Bacillus megaterium; B. stearothermophilus =, Bacillus stearothermophilus; B. subtilis =, Bacillus subtilis; B. thuringiensis =, Bacillus thuringiensis;
C. albicans =, Candida albicans; C. cephalonica =, Corcyra cephalonica; C. glabrata =, Candida glabrata; C. krusei =, Candida krusei; C. parapsilosis
=, Candida parapsilosis; C. xerosis =, Corynebacterium xerosis; Cr. neoformans =, Cryptococcus neoformans; E. coli =, Escherichia coli; E. faecalis
=, Enterococcus faecalis; F. moniliforme =, Fusarium moniliforme; F. oxysporum =, Fusarium oxysporum; F. semitectum =, Fusarium semitectum;
Fusarim sp. =, Fusarium species; G. candidium =, Geotrichum candidum; M. incognita =, Meloidogyne incognita; M. luteus =, Micrococcus luteus;
Micrococcus sp. =, Micrococcus species; Mucor sp. =, Mucor species; P. aeruginosa =, Pseudomonas aeruginosa; P. fluorescens =, Pseudomonas
fluorescens; P. klebsiella =, Pneumoniae klebsiella; P. putida =, Pseudomonas putida; P. vulgaris =, Proteus vulgaris; Pectobacterium sp. =,
Pectobacterium species; Penicillium sp. =, Penicillium species; R. blast =, Rice blast fungus; R. nigricans =, Rhizopus nigricans; R. solani =,
Rhizoctonia solani; S. aureus =, Staphylococcus aureus; S. boydii =, Shigella boydii; S. cerevisiae =, Saccharomyces cerevisiae; S. dysenteriae =,
Shigella dysenteriae; S. enterica =, Salmonella enterica; S. epidermidis =, Staphylococcus epidermidis; S. faecalis =, Streptococcus faecalis; S. flexneri
=, Shigella flexneri; S. griseus =, Streptomyces griseus; S. maltophilia =, Stenotrophomonas maltophilia; S. marcescens =, Serratia marcescens;
S. mutans =, Streptococcus mutans; S. pyogenes =, Streptococcus pyogenes; S. saprophyticus =, Staphylococcus saprophyticus; S. subrogation =,
Staphylococcous subrogation; S. typhi =, Salmonella typhi; S. typhimurium =, Salmonella typhimurium; T. polysporum =, Trichoderma polysporum;
T. roseum =, Trichothecium roseum; T. rubrum =, Trichophyton rubrum; Trichophyton sp. =, Trichophyton species; Trichosporon sp. =,
Trichosporon species; V. cholera =, Vibrio cholera; V. harveyi =, Vibrio harveyi; X. campestris =, Xanthomonas campestris.
Appl Organomet Chem. 2020;e5884. wileyonlinelibrary.com/journal/aoc © 2020 John Wiley & Sons, Ltd. 1 of 33
https://doi.org/10.1002/aoc.5884
2 of 33 GOLBEDAGHI ET AL.
spermine (N,N0 -bis(3-aminopropyl)-1,4-butanediamine). in terms of their association with cancer, has become the
Other di- or polyamines occurring in lower concentra- focus of intensive research. [1,19–24]
tion in living organisms comprise trimethylenediamine Another relevant use of di- and polyamines is in the
(1,3-diaminopropane), cadaverine (1,5-diaminopentane), synthesis of Schiff base compounds, which can then
homospermidine (N-(4-aminobutyl)-1,4-butanediamine), receive applications in coordination chemistry. Indeed,
and norspermine (N,N0 -bis(3-aminopropyl)-1,3-pro- complexation of Schiff base ligands (in particular of mac-
panediamine), but the list includes a few dozens of rocyclic Schiff base derivatives) with metal ions has been
compounds.[7,8] shown to give rise to a considerable number of chemical
The first biogenic amine discovered was spermine, systems exhibiting unique properties for application
which was identified in the human semen by van Leeu- in[19,20] several domains, like catalysis, materials sciences
wenhoek, in 1677, in the form of phosphate.[9] Interest- and medicine, for example. [25–31] This fact has been giv-
ingly, the correct structure of the compound was only ing increased importance to the investigation of this par-
determined in 1926.[10,11] Spermidine was also discovered ticular type of compounds.
and isolated from semen, in the beginning of the 20th
century.[2] Putrescine and cadaverine are likewise present
in the semen, but they were discovered together, by the 1.2 | Schiff base ligands
end of the 19th century, in decaying matter, where they
appear as a result of the breakdown of amino acids.[12–14] Schiff bases are compounds with the general formula
These compounds may occur in both eukaryote (e.g., ani- RR'C=NR” (R" 6¼ H), and can be considered a sub-class
mals, plants, algae) and prokaryote (bacteria) cells.[1–14] of imines.[32,33] Depending on its structure, a Schiff base
The usual amount of di- and polyamines present can be either a secondary aldimine (when R or R' is an H
inside the cells of living systems is at the millimol atom) or a secondary ketamine (when both R and R' are
level.[15,16] However, the concentration of free amines is different from H). Their general designation (Schiff base)
small and maintained within a very narrow range originates from Hugo Schiff, who first discover this type
(7–10% of the total amount) because the decrease in of compounds.[34] A number of other specific usual
their concentration inhibits cell proliferation while names exist for Schiff bases having particular structural
excess is toxic.[15,16] Indeed, most of the di- and poly- elements. For example, a Schiff base derived from an ani-
amines in the cells are bound to different polyanionic line (where R" is a phenyl or a substituted phenyl group)
molecules, especially nucleic acids, but also proteins can be called an anil, while bis-Schiff base compounds
and phospholipids.[13–18] are frequently designated as Salen-type compounds.
It has been noticed that an increase in the concentra- Schiff bases can be synthesized from an aliphatic or
tion of polyamines may be associated with rapidly prolif- aromatic amine and a carbonyl compound by nucleo-
erating cancer cells (in particular in the case of breast, philic addition, forming a hemiaminal, followed by dehy-
colon, lung, prostate and skin tumors), and this has been dration to generate the imine (Scheme 1).
used as basis for diagnosing cancer and monitoring can- The literature on Schiff bases is extensive and it is not
cer treatment.[6,19–22] In fact, the interaction of poly- purpose of this article to address this general topic. In
amines with nucleic acids and other biological molecules, here, we will focus on a specific type of Schiff bases, the
S C H E M E 1 Synthesis of a
Schiff base from condensation of
a carbonyl and an amine
precursor
GOLBEDAGHI ET AL. 3 of 33
ones designated currently by macrocyclic Schiff bases, coordinating atoms and of their relative position on the
which are the members of this family of compounds structures resulting from coordination of these ligands
bearing at least one large (7 membered or larger) ring. to metal ions.[35–46] These studies also aimed to under-
An example of a naturally occurring macrocyclic Schiff stand the factors that most contribute to determine the
base derivative is corrin, which is the parent macrocycle number and size of the chelating rings formed upon
related to the substituted derivative found in vitamin B12 complexation of Schiff base macrocyclic ligands, as well
(cobalamine), but the majority of this type of compounds as the effects of the flexibility and shape of the coordi-
are produced in the laboratory. nating moiety on binding.[36,47–50] Progress on the
Considerable effort has been made in the last two chemistry dedicated to the synthesis of these type of
decades for developing metal-free methods for furnish- Schiff bases has allowed, for example, the preparation
ing macrocycles starting from dicarbonyl compounds of macrobicyclic ligands via a one-step multiple conden-
and diamines (Scheme 2) in addition to standard metal- sation reactions procedure.[35,47–50]
templated protocols.[35,36] A large variety of [1 + 1] and The macrocyclic Schiff bases can also be reduced to the
[2 + 2]-(macrocyclic) ligands has been synthesized in related polyamine derivatives, containing the same cyclic
order to ascertain correctly the role of the different complexity, by reaction with an appropriate reducing
S C H E M E 2 Main possible condensation products of dicarbonyl compounds with diamines in different proportions. The R groups may
be distinct from each other and X and Y represent generic fragments (in general alkyl chains)
4 of 33 GOLBEDAGHI ET AL.
agent.[35–38] Similarly, the related complexes can undergo and ovarian cancers by the U.S. Food and Drug Adminis-
reductive decomplexation reactions when treated with tration (FDA) in 1978,[61–63] and in Europe one year
appropriate reductants, with the consequent formation of later.[64] Interestingly, despite the fact that thousands of
the corresponding polyamine derivatives.[35–38] These poly- cisplatin analogues have been synthesized since then,
amine compounds are less sensitive to hydrolysis and more and tested as potential anticancer drugs, only two of
flexible than their imine analogous, what can be of interest them, carboplatin and oxaliplatin, have been used in the
for certain applications. clinical treatment of neoplasic diseases, while the rest
Introduction of specific functionalities at the periphery have remained inactive.[60,65–70]
of the coordinating moiety has allowed the synthesis of Being common ligands in coordination chemistry,
macrocyclic systems capable of multi-recognition, and that Schiff bases have been used extensively in this field, giv-
may be used, for example, in specific separation,[51–54] ing rise to a plethora of different types of complexes.
transport processes across membranes,[55,56] or activation Their coordination ability results mainly from the π-
and catalysis in ecocompatible solvents.[57] In these areas, acceptor properties of their constituting imine nitrogen
the presence in the molecules of pendant arms (two or atom. Accordingly, the coordination versatility of Schiff
more) attached to the proper positions of the macrocycle bases strongly increases when the ligand bears several
framework appears particularly interesting, since it allows imine groups, which may act as multiple coordination
for the generation of a pseudo-enclosed environment suit- sites. Procedures have been developed successfully for
able for modeling of supramolecular molecule-receptor preparation of mono-, di- or polymacrocycles, catenands,
systems.[58] On the other hand, for macrocycles acting as compartmental ligands and calixarenes based on Schiff
receptors, the hole size represents an additional parameter bases.[71]
which may greatly influence the ability to discriminate An interesting observation is that complexation with
among the different species to be recognized. a metal often improves the stability of the Schiff base
Macrocyclic Schiff base derivatives are in general ligand, while most of the macrocyclic complexes have
good chelating agents and prone to form different types also been noticed to be both kinetically and thermody-
of complexes with metal ions. In fact, one of the most namically more stable than the analogous compounds
popular methods for the synthesis of macrocyclic Schiff with non-cyclic ligands.[72] These facts have contributed
bases requires the active participation of a metal ion in to stimulate research on this type of compounds, which
the process, i.e., the metal-promoted one-step (template) in turn has allowed elucidating aspects of the reactivity
condensation method.[41–45] In this synthetic procedure, of Schiff base coordination compounds that would not be
a metal ion is used as template to induce orientation of possible to investigate using the less stable analogous
the reacting groups of linear substrates in the required complexes of non-cyclic ligands. The interest in exploring
conformation for the ring to close.[59] In this way, one metal ion complexes with macrocyclic Schiff base type
has direct access to macrocyclic Schiff base metal com- ligands has received strong stimulus also owing to the
plexes, whose practical applications are, as already men- recognition of the role played by this kind of structures in
tioned, relevant in many different domains.[14,17,38,58] In metalloproteins,[71] and a broad variety of Schiff base
this article we will focus on their uses as bioactive sys- macrocycles have been used for metal-biosites modeling
tems, in particular as antibacterial and antifungal agents. of cationic, anionic or neutral receptors.[35] In addition,
the progress on synthetic macrocyclic chemistry has also
resulted in an increased understanding of the properties
1.3 | Macrocyclic Schiff base metal and function of naturally occurring biological mac-
complexes rocycles and their complexes.[58,73]
Among the general type of systems considered in this
The majority of therapeutic drugs are organic compounds review, those formed by functionally substituted macro-
and, because of this, less attention has been given in this cyclic Schiff bases ligands bearing additional donor
field to inorganic and coordination compounds. Never- groups are of particular interest. Such ligands represent
theless, the number of inorganic and coordination com- one of the most important classes of heteropolydentate
pounds shown to exhibit beneficial bioactive properties ligands capable of forming not only mononuclear com-
has been growing considerably during the last decades. plexes of different types with transition and/or non-
They have been noticed to be particularly effective in transition metal ions, but also diverse bi- and polynuclear
cancer therapy, as a result of their ability to specifically complexes with potential for application in several areas.
interact with DNA.[1,6,19–24,60] The prototype compound The progressive availability of larger and more multifari-
is cisplatin [cis-diaminedichloroplatinum (II)], which was ous ligands exhibiting such structural characteristics has
approved as a chemotherapeutic drug for use in testicular been facilitating also the design of macrocyclic Schiff
GOLBEDAGHI ET AL. 5 of 33
TABLE 1 Biological applications of macrocyclic Schiff base ligands and their metal complexes: literature highlights 2005–2019
H.I. Ugras, I. Basaran, A new macrocyclic Schiff base has been [79]
T. Kilic, U. Cakir prepared by condensation of triethylene
glycol diamine with terephtalaldehyde.
The synthesized ligand has been shown to
possess high activity against the studied
microorganisms (E. coli, S. epidermidis, B.
subtilis, S. aureus, S. Typhimirum, K.
pneumonia, P. aeruginosa and E. faecalis
bacterial strains and the C. albicans
fungi).
(Continues)
6 of 33 GOLBEDAGHI ET AL.
TABLE 1 (Continued)
TABLE 1 (Continued)
(Continues)
8 of 33 GOLBEDAGHI ET AL.
TABLE 1 (Continued)
TABLE 1 (Continued)
N. Nishat, A.S. Dhyani Co (II), Ni (II), Mn (II), Cu (II) and Zn (II) [95]
complexes with a new macrocyclic ligand,
1,4,11,14-tetraaza-cyclonanodeca-
5,10-dioxo-1,14-diene were synthe-sized.
All studied complexes were screened
against bacterial (S. aureus, E. coli, B.
subtillis and S. typhimurium) and fungal
(A. oryzae and C. albicans) strains.
Preliminary results showed that the
complexes inhibited bacterial/fungal
growth to a greater extent than the free
ligand.
(Continues)
10 of 33 GOLBEDAGHI ET AL.
TABLE 1 (Continued)
TABLE 1 (Continued)
(Continues)
12 of 33 GOLBEDAGHI ET AL.
TABLE 1 (Continued)
TABLE 1 (Continued)
(Continues)
14 of 33 GOLBEDAGHI ET AL.
TABLE 1 (Continued)
TABLE 1 (Continued)
Y.F. Chen, L. Wei, J.L. Bai, Two complexes were synthesized by [2 + 2] [116]
H. Zhou, Q.M. Huang, cyclo-condensation of
J.B. Li, Z.Q. Pan 2,6-diformyl-4-fluorophenol with
1,3-propyldiamine in the presence of Zn
(II) and Mn (II). The antibacterial activity
of the compounds against S. aureus was
investigated using penicillin as reference
system.
(Continues)
16 of 33 GOLBEDAGHI ET AL.
TABLE 1 (Continued)
TABLE 1 (Continued)
(Continues)
18 of 33 GOLBEDAGHI ET AL.
TABLE 1 (Continued)
TABLE 1 (Continued)
(Continues)
20 of 33 GOLBEDAGHI ET AL.
TABLE 1 (Continued)
TABLE 1 (Continued)
(Continues)
22 of 33 GOLBEDAGHI ET AL.
TABLE 1 (Continued)
TABLE 1 (Continued)
(Continues)
24 of 33 GOLBEDAGHI ET AL.
TABLE 1 (Continued)
TABLE 1 (Continued)
(Continues)
26 of 33 GOLBEDAGHI ET AL.
TABLE 1 (Continued)
TABLE 1 (Continued)
(Continues)
28 of 33 GOLBEDAGHI ET AL.
TABLE 1 (Continued)
TABLE 1 (Continued)
base metal complexes with specific properties resulting pharmacophore are indeed already on the market or in
from the simultaneous presence of metal ions in close advanced phases of clinical trials. Mimopezil {IUPAC
proximity within the same coordinating moiety. For name: (5R,9R,E)-5-(((E)-5-chloro-2-hydroxy-3-methoxy-
example, using compartmental ligands, binuclear com- benzylidene) amino)-11-ethylidene-7-methyl-5,6,9,10-tet-
plexes have been synthesized where the two metal cen- rahydro-5,9-methanocycloocta[b]pyri-din-2(1H)-one}, for
ters, if paramagnetic, interact with each other through example, is an acetylcholinesterase (AChE) inhibitor that
the bridging donor atoms of the ligands in a ferromag- has demonstrated potential use in the treatment of
netic or antiferromagnetic way; by introducing modifica- Alzheimer's disease,[74] while the drug known by dBET57
tions in the ligands, one can adjust the distance between {IUPAC name: 2-((S)-4-(4-chlorophenyl)-2,3,9-trimethyl-
the two chambers and/or the paramagnetic centers as 6H-thieno[3,2-f] [1, 2, 4] triazolo [4,3-a][1,4]diazepin-6-
well as the chemical environment around them, thus all- yl)-N-(2-((2-(2,6-dioxopiperidin-3-yl)-1,3-dioxoisoindolin-
owing for the modulation of the magnetic interactions in 4-yl)amino)ethyl) acetamide} is a cancer PROTAC (prote-
order to achieve the desired materials' magnetic olysis-targeting chimeras) type active agent [75]. Never-
properties.[72] theless, in spite of all accumulated favorable data, and
These types of complexes can be obtained by self- the large list of publications stressing the potential of this
condensation of suitable formyl- or keto- precursors and type of compounds as medicines, the practical use of
primary (poly)amines followed by coordination to the macrocyclic compounds in general as drugs, and of mac-
metal center via reaction with an appropriate metal rocyclic Schiff bases complexes in particular, is yet rather
salt.[35,72] Alternatively, they can be obtained in a single limited. Indeed, there is still a considerable resistance to
step by the already mentioned metal-template the acceptance of macrocycles as pharmaceutical agents
procedure.[41–45,59] In some cases, the initially synthe- mostly because they did not fit the usual structural para-
sized complexes can be converted in other species digm followed by the industry: small heterocyclic mole-
through transmetalation reactions, leading to species oth- cules with a reduced number of functional groups that
erwise not accessible to synthesis.[72] Template and tran- most of times conformed to the Lipinski's rule of five.[76]
smetalation reactions quite often give rise to the desired Also, the synthetic challenge for macrocyclic structures is
complexes in high-yield and in a satisfactory purity just recently been partially overcome and time is still
grade. required to fulfil the necessities of the library formats
As shown in the next section, the potential biomedi- needed for the high throughput screening efforts essen-
cal applications of macrocyclic Schiff bases and of their tial to the majority of contemporary drug discovery pro-
metal complexes as antimicrobial agents are very grams. These facts give additional relevance to
relevant, and some drugs based on this type of publications gathering together the most prominent
30 of 33 GOLBEDAGHI ET AL.
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