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NCBI Blast - Nucleotide Sequence
NCBI Blast - Nucleotide Sequence
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Descriptions
https://blast.ncbi.nlm.nih.gov/Blast.cgi 1/16
30/4/2021 NCBI Blast:Nucleotide Sequence
https://blast.ncbi.nlm.nih.gov/Blast.cgi 2/16
30/4/2021 NCBI Blast:Nucleotide Sequence
https://blast.ncbi.nlm.nih.gov/Blast.cgi 3/16
30/4/2021 NCBI Blast:Nucleotide Sequence
https://blast.ncbi.nlm.nih.gov/Blast.cgi 4/16
30/4/2021 NCBI Blast:Nucleotide Sequence
Graphic Summary
https://blast.ncbi.nlm.nih.gov/Blast.cgi 5/16
30/4/2021 NCBI Blast:Nucleotide Sequence
Alignments
Alignment view Pairwise CDS feature Restore defaults
https://blast.ncbi.nlm.nih.gov/Blast.cgi 6/16
30/4/2021 NCBI Blast:Nucleotide Sequence
Range 2: 94 to 186
https://blast.ncbi.nlm.nih.gov/Blast.cgi 7/16
30/4/2021 NCBI Blast:Nucleotide Sequence
https://blast.ncbi.nlm.nih.gov/Blast.cgi 8/16
30/4/2021 NCBI Blast:Nucleotide Sequence
+
Sbjct 169 SR 170
Taxonomy
Reports
Lineage
......Staphylococcaceae firmicutes 26
.......Staphylococcus firmicutes 25
.........Staphylococcus aureus subsp. aureus 091751 firmicutes 98.2 1 Staphylococcus aureus subsp. aureus 091751 hits
.........Staphylococcus aureus subsp. aureus MRGR3 firmicutes 98.2 1 Staphylococcus aureus subsp. aureus MRGR3 hits
.........Staphylococcus aureus subsp. aureus 112808A firmicutes 98.2 1 Staphylococcus aureus subsp. aureus 112808A hits
.........Staphylococcus aureus subsp. aureus MN8 firmicutes 98.2 1 Staphylococcus aureus subsp. aureus MN8 hits
.........Staphylococcus aureus subsp. aureus str. Staphylococcus aureus subsp. aureus str. Newbould
firmicutes 98.2 2
Newbould 305 305 hits
......Listeria grayi DSM 20601 firmicutes 76.3 1 Listeria grayi DSM 20601 hits
......Bacillus toyonensis firmicutes 72.0 1 Bacillus toyonensis hits
https://blast.ncbi.nlm.nih.gov/Blast.cgi 9/16
30/4/2021 NCBI Blast:Nucleotide Sequence
.....Lactiplantibacillus pentosus MP-10 firmicutes 108 1 Lactiplantibacillus pentosus MP-10 hits
....Pseudoflavonifractor capillosus ATCC 29799 firmicutes 81.6 2 Pseudoflavonifractor capillosus ATCC 29799 hits
....[Ruminococcus] gnavus ATCC 29149 firmicutes 73.6 1 [Ruminococcus] gnavus ATCC 29149 hits
....Clostridium botulinum NCTC 2916 firmicutes 72.4 1 Clostridium botulinum NCTC 2916 hits
high GC
...Mycobacteroides abscessus subsp. abscessus 75.1 1 Mycobacteroides abscessus subsp. abscessus hits
Gram+
...Mycoplasma leachii 99/014/6 mycoplasmas 56.6 2 Mycoplasma leachii 99/014/6 hits
...Mycoplasma capricolum subsp. capripneumoniae mycoplasmas 56.6 1 Mycoplasma capricolum subsp. capripneumoniae hits
d-
..uncultured Desulfobacterium sp. 96.3 1 uncultured Desulfobacterium sp. hits
proteobacteria
b-
..Pusillimonas sp. T2 92.4 1 Pusillimonas sp. T2 hits
proteobacteria
..Klebsiella pneumoniae subsp. pneumoniae enterobacteria 82.8 5 Klebsiella pneumoniae subsp. pneumoniae hits
Organism
conserved hypothetical protein [Staphylococcus aureus subsp. aureus 65-1322] 152 3e-41 EEV07376
Staphylococcus aureus A6300 [firmicutes ]
https://blast.ncbi.nlm.nih.gov/Blast.cgi 10/16
30/4/2021 NCBI Blast:Nucleotide Sequence
hypothetical protein GBS90503_1759, partial [Streptococcus agalactiae LADL-90-503] 121 2e-29 CCQ78410
Lactobacillus jensenii 269-3 [firmicutes ]
https://blast.ncbi.nlm.nih.gov/Blast.cgi 11/16
30/4/2021 NCBI Blast:Nucleotide Sequence
hypothetical protein S103564_2282 [Staphylococcus aureus subsp. aureus 103564] 98.2 6e-21 EOR32948
Staphylococcus aureus subsp. aureus 091751 [firmicutes ]
hypothetical protein S091751_1680 [Staphylococcus aureus subsp. aureus 091751] 98.2 6e-21 EOR33737
Staphylococcus aureus subsp. aureus MRGR3 [firmicutes ]
hypothetical protein MRGR3_2103 [Staphylococcus aureus subsp. aureus MRGR3] 98.2 6e-21 EOR39026
Staphylococcus aureus subsp. aureus 112808A [firmicutes ]
hypothetical protein M140OLGA_1496 [Staphylococcus aureus subsp. aureus 112808A] 98.2 6e-21 EOR48236
Staphylococcus aureus subsp. aureus MN8 [firmicutes ]
hypothetical protein HMPREF0769_10001, partial [Staphylococcus aureus subsp. aureus MN8] 98.2 7e-21 EFH95999
Staphylococcus aureus subsp. aureus str. Newbould 305 [firmicutes ]
hypothetical protein Newbould305_2728, partial [Staphylococcus aureus subsp. aureus str. Newbould
98.2 7e-21 EJE55184
305]
hypothetical protein Newbould305_1533 [Staphylococcus aureus subsp. aureus str. Newbould 305] 94.4 2e-19 EJE56045
uncultured Desulfobacterium sp. [d-proteobacteria ]
https://blast.ncbi.nlm.nih.gov/Blast.cgi 12/16
30/4/2021 NCBI Blast:Nucleotide Sequence
PG1 protein, homology to Homo sapiens [Lactobacillus crispatus ST1] 93.6 9e-19 CBL51099
PG1 protein, homology to Homo sapiens [Lactobacillus crispatus ST1] 93.6 1e-18 CBL49508
PG1 protein, homology to Homo sapiens [Lactobacillus crispatus ST1] 93.6 1e-18 CBL49887
PG1 protein, homology to Homo sapiens [Lactobacillus crispatus ST1] 93.6 1e-18 CBL49899
Streptococcus ruminantium [firmicutes ]
hypothetical protein Y001_00420, partial [Staphylococcus aureus MUF256] 88.6 9e-18 ETO54462
Lactobacillus salivarius cp400 [firmicutes ]
hypothetical protein BACCAP_04474 [Pseudoflavonifractor capillosus ATCC 29799] 81.6 1e-16 EDM97731
hypothetical protein BACCAP_03832 [Pseudoflavonifractor capillosus ATCC 29799] 81.6 1e-16 EDM98346
Paenibacillus polymyxa [firmicutes ]
hypothetical protein C3J96_28110 [Klebsiella pneumoniae subsp. pneumoniae] 82.8 8e-16 PZA81073
hypothetical protein C3J85_28825 [Klebsiella pneumoniae subsp. pneumoniae] 82.8 8e-16 PZB27120
hypothetical protein C3J88_29045 [Klebsiella pneumoniae subsp. pneumoniae] 82.8 8e-16 PZB50191
hypothetical protein C3K02_28415 [Klebsiella pneumoniae subsp. pneumoniae] 82.8 8e-16 PZC24451
hypothetical protein [Klebsiella pneumoniae subsp. pneumoniae] 53.5 8e-13 MBA2096764
Paenibacillus sp. ICGEB2008 [firmicutes ]
hypothetical protein CBB_A0131, partial [Clostridium botulinum Bf] 78.2 6e-14 EDT83674
Lactobacillus fermentum 28-3-CHN [firmicutes ]
https://blast.ncbi.nlm.nih.gov/Blast.cgi 13/16
30/4/2021 NCBI Blast:Nucleotide Sequence
hypothetical protein CLOLEP_01442 [[Clostridium] leptum DSM 753] 72.0 4e-13 EDO61933
Clostridium botulinum [firmicutes ]
hypothetical protein HMPREF0556_11507, partial [Listeria grayi DSM 20601] 76.3 9e-13 EFI83919
Staphylococcus epidermidis [firmicutes ]
hypothetical protein CLOBOL_05378 [[Clostridium] bolteae ATCC BAA-613] 74.3 2e-12 EDP14834
[Ruminococcus] gnavus ATCC 29149 [firmicutes ]
hypothetical protein RUMGNA_02974 [[Ruminococcus] gnavus ATCC 29149] 73.6 3e-12 EDN76677
Clostridium botulinum NCTC 2916 [firmicutes ]
conserved hypothetical protein, partial [Clostridium botulinum NCTC 2916] 72.4 5e-12 EDT79947
Bacillus toyonensis [firmicutes ]
hypothetical protein HMPREF0526_10715, partial [Lactobacillus jensenii JV-V16] 73.6 8e-12 EFH30562
Faecalibacterium sp. An122 [firmicutes ]
hypothetical protein BVRB_022340 [Beta vulgaris subsp. vulgaris] 72.0 1e-11 KMS94345
Brugia timori [nematodes ]
hypothetical protein MCCPILRI181_00976 [Mycoplasma capricolum subsp. capripneumoniae] 56.6 1e-10 CEA11314
Taxonomy
https://blast.ncbi.nlm.nih.gov/Blast.cgi 14/16
30/4/2021 NCBI Blast:Nucleotide Sequence
. Bacteria 138 66
.. Terrabacteria group 130 62
...... Staphylococcaceae 26 15
....... Staphylococcus 25 14
........ Staphylococcus aureus 10 11 Staphylococcus aureus hits
......... Staphylococcus aureus subsp. aureus 65-1322 1 1 Staphylococcus aureus subsp. aureus 65-1322 hits
......... Staphylococcus aureus A6300 1 1 Staphylococcus aureus A6300 hits
......... Staphylococcus aureus A5937 1 1 Staphylococcus aureus A5937 hits
......... Staphylococcus aureus subsp. aureus 103564 1 1 Staphylococcus aureus subsp. aureus 103564 hits
......... Staphylococcus aureus subsp. aureus 091751 1 1 Staphylococcus aureus subsp. aureus 091751 hits
......... Staphylococcus aureus subsp. aureus MRGR3 1 1 Staphylococcus aureus subsp. aureus MRGR3 hits
......... Staphylococcus aureus subsp. aureus 112808A 1 1 Staphylococcus aureus subsp. aureus 112808A hits
......... Staphylococcus aureus subsp. aureus MN8 1 1 Staphylococcus aureus subsp. aureus MN8 hits
......... Staphylococcus aureus subsp. aureus str. Staphylococcus aureus subsp. aureus str. Newbould 305
2 1
Newbould 305 hits
......... Staphylococcus aureus MUF256 1 1 Staphylococcus aureus MUF256 hits
...... Listeria 3 2
....... Listeria monocytogenes J2818 2 1 Listeria monocytogenes J2818 hits
....... Listeria grayi DSM 20601 1 1 Listeria grayi DSM 20601 hits
...... Bacillaceae 3 3
....... Bacillus 2 2
..... Lactobacillales 67 22
...... Enterococcus faecalis TX1467 1 1 Enterococcus faecalis TX1467 hits
...... Lactobacillaceae 56 14
....... Lactobacillus 40 8
........ Lactobacillus amylolyticus 4 1 Lactobacillus amylolyticus hits
https://blast.ncbi.nlm.nih.gov/Blast.cgi 15/16
30/4/2021 NCBI Blast:Nucleotide Sequence
....... Lactiplantibacillus pentosus MP-10 1 1 Lactiplantibacillus pentosus MP-10 hits
.... Eubacteriales 15 10
..... Heliobacterium modesticaldum Ice1 1 1 Heliobacterium modesticaldum Ice1 hits
..... Oscillospiraceae 9 4
...... Pseudoflavonifractor capillosus ATCC 29799 2 1 Pseudoflavonifractor capillosus ATCC 29799 hits
...... [Clostridium] leptum DSM 753 1 1 [Clostridium] leptum DSM 753 hits
...... Faecalibacterium 6 2
....... Clostridium botulinum NCTC 2916 1 1 Clostridium botulinum NCTC 2916 hits
..... Lachnospiraceae 2 2
...... [Clostridium] bolteae ATCC BAA-613 1 1 [Clostridium] bolteae ATCC BAA-613 hits
...... [Ruminococcus] gnavus ATCC 29149 1 1 [Ruminococcus] gnavus ATCC 29149 hits
... Actinomycetia 6 2
.... Streptomyces griseocarneus 5 1 Streptomyces griseocarneus hits
.... Mycobacteroides abscessus subsp. abscessus 1 1 Mycobacteroides abscessus subsp. abscessus hits
... Mollicutes 4 3
.... Mesoplasma florum L1 1 1 Mesoplasma florum L1 hits
..... Mycoplasma capricolum subsp. capripneumoniae 1 1 Mycoplasma capricolum subsp. capripneumoniae hits
.. Proteobacteria 7 3
... uncultured Desulfobacterium sp. 1 1 uncultured Desulfobacterium sp. hits
. Eukaryota 15 6
.. Mesangiospermae 12 3
... Pentapetalae 9 2
Top
https://blast.ncbi.nlm.nih.gov/Blast.cgi 16/16